DNA & RNA Element - RepTar |
Gene Name | miRNA | Begin | End | Profile |
Spna2 | mmu-miR-767 | beg:167 | end:183 | pic:3' ACGAGTCTGTTGGTACCACGT 5'& .||| ||||||| &5' ----TAGAAA---ATGGTGC- 3' |
Spna2 | mmu-miR-134 | beg:189 | end:207 | pic:3' GGGGAGACCAGTTGGTCAGTGT 5'& || ||. ||||||||| &5' CCGCTT-------CCAGTCACA 3' |
Spna2 | mmu-miR-141 | beg:108 | end:124 | pic:3' GGTAGAAATGGTCTGTCACAAT 5'& ||||||||||||| &5' ---------CCAGACAGTGTTA 3' |
Spna2 | mmu-miR-200a | beg:108 | end:124 | pic:3' TGTAGCAATGGTCTGTCACAAT 5'& ||||||||||||| &5' ---------CCAGACAGTGTTA 3' |
Spna2 | mmu-miR-218-1star | beg:220 | end:240 | pic:3' CCACGAACTGC--CTTGGTACAAA 5'& ||| || |||||||| &5' -------GACCCAGACCCATGTTT 3' |
Spna2 | mmu-miR-1966 | beg:274 | end:293 | pic:3' CTGAGAGAGGACTCG-GTCGAGGGAA 5'& ||| || |||||||||| &5' ---------CTG-GCTCAGCTCCCTT 3' |
Spna2 | mmu-miR-200cstar | beg:149 | end:166 | pic:3' GGTTTGTGACGA--CCCATTCTGC 5'& ||| ||||||||| &5' ---------GCTTGGGGTAAGAC- 3' |
Spna2 | mmu-miR-24-1star | beg:7 | end:23 | pic:3' TGACTATAGTCGAGTCATCCGTG 5'& | |||. ||||||| &5' -------TTGGCTT-GTAGGCA- 3' |
Spna2 | mmu-miR-24-2star | beg:7 | end:23 | pic:3' TGACAAAGTCGAGTCATCCGTG 5'& | |||. ||||||| &5' ------TTGGCTT-GTAGGCA- 3' |
Spna2 | mmu-miR-758 | beg:195 | end:208 | pic:3' ATCACCTGGTCCAGTGTTT 5'& ||| ||||||| &5' -------CCA-GTCACAA- 3' |
Spna2 | mmu-miR-293star | beg:224 | end:243 | pic:3' GTTTTACAGTGTGT---CAAACTCA 5'& || || ||||||| &5' --------CAGACCCATGTTTGAG- 3' |
Spna2 | mmu-miR-292-5p | beg:225 | end:243 | pic:3' GTTTTCTCGGGGGTCAAACTCA 5'& ||| ||| ||||||| &5' ----AGA-CCCAT-GTTTGAG- 3' |
Spna2 | mcmv-miR-m01-2 | beg:282 | end:303 | pic:3' TGGCAAGGTTGGGCTAAGAGAAG 5'& | ||| |..| |||||||| &5' ---GCTCC--CTTGTTTCTCTTC 3' |
Spna2 | mmu-let-7c | beg:132 | end:156 | pic:3' TTGGTATGTTGGATG-ATGGAGT 5'& ||||||| |.|||.| || ||. &5' AACCATA-AGCCTGCTTAGCTT- 3' |
Spna2 | mmu-miR-1191 | beg:149 | end:167 | pic:3' ATCCCGATGTATCATTCTGAC 5'& ||| .|||||||| &5' ----GCTTGG-GGTAAGACT- 3' |
Spna2 | mmu-miR-1193 | beg:14 | end:35 | pic:3' CTATCATTTTGCCCACTGGAT 5'& .||| ||.| ||||||| &5' -GTAGGCAAGCC--TGACCTA 3' |
Spna2 | mmu-miR-135astar | beg:40 | end:59 | pic:3' GCGGTGCCGAGGTTAGGGATAT 5'& ||| | |.| |||.|||| &5' -GCC-CTGTT---ATCTCTAT- 3' |
Spna2 | mmu-miR-143 | beg:34 | end:56 | pic:3' CTCGATGTCACGA---AGTAGAGT 5'& ||.| ||| |.||||| &5' ---CTGCT-TGCCCTGTTATCTC- 3' |
Spna2 | mmu-miR-149 | beg:226 | end:247 | pic:3' CCCTCACTTCTGTGC---CTCGGTCT 5'& || ||.| ||||||| &5' ------GACC-CATGTTTGAGCCAG- 3' |
Spna2 | mmu-miR-1839-5p | beg:42 | end:65 | pic:3' GTTCTGGACA----AGATAGATGGAA 5'& ||||| ||||||||.|| &5' -----CCTGTTATCTCTATCTATCT- 3' |
Spna2 | mmu-miR-185 | beg:281 | end:303 | pic:3' AGTCCTTGACGGA---AAGAGAGGT 5'& |.|| ||| ||||||.| &5' -----AGCTCCCTTGTTTCTCTTC- 3' |
Spna2 | mmu-miR-188-3p | beg:207 | end:225 | pic:3' ACGTTTGGG-ACGTACACCCTC 5'& ||| ||. ||||||| &5' -----ACCAATGT-TGTGGGA- 3' |
Spna2 | mmu-miR-1897-5p | beg:285 | end:308 | pic:3' GGGGGAGAAAGAGGTAGGTTTC 5'& |||.| ||||||. ||||| &5' -CCCTTGTTTCTCTTCCCAAA- 3' |
Spna2 | mmu-miR-190 | beg:54 | end:85 | pic:3' TGGATTATATAGTT-------TGTATAGT 5'& |.||| ||||| .|||.||| &5' ATCTATC-TATCACCTTTGCTGCATGTCA 3' |
Spna2 | mmu-miR-1935 | beg:77 | end:97 | pic:3' TCTCTAGGCGGTC--GGAGACGGA 5'& .|.|| |||||||.| &5' -------TGTCACTTCCTCTGCTT 3' |
Spna2 | mmu-miR-193star | beg:331 | end:343 | pic:3' AGTAGAACGGGCGTTTCTGGGT 5'& ||.|||.|| &5' -------------AAGGACTCA 3' |
Spna2 | mmu-miR-1948 | beg:129 | end:153 | pic:3' GACATGCTCA--CGAGACGGATTT 5'& |||| || ||||.||. &5' -TGTAACCATAAGC-CTGCTTAG- 3' |
Spna2 | mmu-miR-1959 | beg:86 | end:113 | pic:3' GAGGTGA------CTCGATGTAGGGG 5'& ||| || ||| |.||.|| &5' CTCTGCTTTCAAGGAGA-ATATTCC- 3' |
Spna2 | mmu-miR-1968 | beg:229 | end:251 | pic:3' TCAGGTGGTAGGAATT--GTCGACGT 5'& | |||| .||.| ||||||| &5' ----C-CCATGTTTGAGCCAGCTGC- 3' |
Spna2 | mmu-miR-1969 | beg:40 | end:61 | pic:3' TGGGTACAATTTCAGAGGTAGAA 5'& .||| ||||| ||||.|||| &5' GCCC-TGTTA---TCTCTATCT- 3' |
Spna2 | mmu-miR-1982star | beg:285 | end:307 | pic:3' GGAGGGGTCCT--GGGAGGGTT 5'& |||||. .|.|||||| &5' -CTCCCTTGTTTCTCTTCCCAA 3' |
Spna2 | mmu-miR-200b | beg:104 | end:124 | pic:3' AGTAGTAATGGTCCGTCATAAT 5'& .||| |||| ||||.||| &5' ----TATT-CCAGACAGTGTTA 3' |
Spna2 | mmu-miR-2141 | beg:71 | end:90 | pic:3' TTGAAAAGACTGTGGAGGA 5'& .|| || |||.|||| &5' -GCTGCA-TGTCACTTCCT 3' |
Spna2 | mmu-miR-24 | beg:228 | end:246 | pic:3' GACAAGGACGACTTGACTCGGT 5'& || || .||||||| &5' -----CCCA-TGT-TTGAGCCA 3' |
Spna2 | mmu-miR-295star | beg:228 | end:243 | pic:3' CTTCACACGGGGTGTAAACTCA 5'& ||||..|||||| &5' ---------CCCATGTTTGAG- 3' |
Spna2 | mmu-miR-298 | beg:74 | end:96 | pic:3' CCCTTCTTGT-CG--GGAGGAGACGG 5'& .|| |. |.||||||||. &5' -------GCATGTCACTTCCTCTGCT 3' |
Spna2 | mmu-miR-29a | beg:167 | end:184 | pic:3' ATTGGCTAAAGTCT---ACCACGAT 5'& .||| ||||||| &5' ----------TAGAAAATGGTGCT- 3' |
Spna2 | mmu-miR-29b | beg:161 | end:184 | pic:3' TTGTGACTAAAG-TTTACCACGAT 5'& ||| |||||||||| &5' ---ACTTAGTAGAAAATGGTGCT- 3' |
Spna2 | mmu-miR-29c | beg:171 | end:184 | pic:3' ATTGGCTAAAGTTTACCACGAT 5'& |||||||||| &5' -----------AAATGGTGCT- 3' |
Spna2 | mmu-miR-331-5p | beg:42 | end:62 | pic:3' CCTAGGGACCCTGGT-ATGGATC 5'& ||||| |.| ||.||| &5' ----CCCTGTTATCTCTATCTA- 3' |
Spna2 | mmu-miR-3473 | beg:235 | end:253 | pic:3' CCGACTCGGTAGAGAGGT 5'& .||||||| || || &5' --TTGAGCCAGCTGCCC- 3' |
Spna2 | mmu-miR-34a | beg:21 | end:42 | pic:3' TGTTGGTCGATTCTGTGACGGT 5'& |.|| | |||||||. &5' --AGCCTGACCT-ACACTGCT- 3' |
Spna2 | mmu-miR-34b-5p | beg:21 | end:43 | pic:3' TGTTAGTC-GATTA-ATGTGACGGA 5'& || ||.| ||||||||.| &5' ------AGCCTGACCTACACTGCTT 3' |
Spna2 | mmu-miR-34c | beg:18 | end:43 | pic:3' CGTTAGTCGATT-GATGTGACGGA 5'& |||| ||.| |||||||||.| &5' GCAAGC--CTGACCTACACTGCTT 3' |
Spna2 | mmu-miR-379 | beg:42 | end:69 | pic:3' GGATGCA--AGGTATC-AGATGGT 5'& |||. ||.|| ||||.|| &5' CCTGTTATCTCTATCTATCTATCA 3' |
Spna2 | mmu-miR-429 | beg:104 | end:124 | pic:3' TGCCGTAATGGTCTGTCATAAT 5'& .||| |||||||||.||| &5' ----TATT-CCAGACAGTGTTA 3' |
Spna2 | mmu-miR-449a | beg:18 | end:42 | pic:3' TGGTC-GATTGTTATGTGACGGT 5'& .| || ||.|| ||||||||. &5' GCAAGCCTGACC-TACACTGCT- 3' |
Spna2 | mmu-miR-449b | beg:18 | end:43 | pic:3' CGGTC-GATTGT-TGTGACGGA 5'& || || ||.|| |||||||.| &5' GCAAGCCTGACCTACACTGCTT 3' |
Spna2 | mmu-miR-449c | beg:18 | end:43 | pic:3' GGTCGATCGTTAC----GTGACGGA 5'& .|| ||| ||||||.| &5' --GGCAAGCCTGACCTACACTGCTT 3' |
Spna2 | mmu-miR-450a-3p | beg:289 | end:307 | pic:3' TACTTACGTTTCGTAGGGGTTA 5'& ||. |.||||| &5' -----TGTTTCTC-TTCCCAA- 3' |
Spna2 | mmu-miR-450b-3p | beg:289 | end:307 | pic:3' TACGTACGTTTTACAAGGGTTA 5'& ||. ||||||| &5' -----TGTTTCTC-TTCCCAA- 3' |
Spna2 | mmu-miR-470 | beg:82 | end:104 | pic:3' TGAGTGGTCACGGTCAGGTTCTT 5'& |||. || |||. |.||||.| &5' ACTT-CCTCTGCT--TTCAAGGA 3' |
Spna2 | mmu-miR-483 | beg:283 | end:317 | pic:3' GAGGGA----AGAGAAG-----AGGGCAGAA 5'& |||||| ||||||| |||.||.|| &5' CTCCCTTGTTTCTCTTCCCAAATCCTGTTTT 3' |
Spna2 | mmu-miR-501-3p | beg:301 | end:323 | pic:3' GTTTAGGAACGGGCCCACGTAA 5'& ||||||| ||... ||.| &5' CAAATCC-TGTTTTCATGTA-- 3' |
Spna2 | mmu-miR-665 | beg:0 | end:12 | pic:3' TCCCTGGAGTC-GGAGGACCA 5'& ||| ||||.||| &5' -------TCAATCCTCTTGG- 3' |
Spna2 | mmu-miR-692 | beg:90 | end:106 | pic:3' CTCACTCCGCGAGTTTCTCTA 5'& || .||||.|||| &5' -------GCTTTCAAGGAGA- 3' |
Spna2 | mmu-miR-704 | beg:71 | end:84 | pic:3' GATCCTCGTCTCG-TGTACAGA 5'& || .|||||| &5' -----------GCTGCATGTC- 3' |
Spna2 | mmu-miR-709 | beg:77 | end:99 | pic:3' AGGAG-GACGGAGACGGAGG 5'& . || || |||||||.|.| &5' -TGTCACTTCCTCTGCTTTC 3' |
Spna2 | mmu-miR-763 | beg:229 | end:250 | pic:3' CGGTGACCAAGAAGGGTCGACC 5'& |||. |||. ||||||| &5' -CCAT--GTTTGAGCCAGCTG- 3' |
Spna2 | mmu-miR-877 | beg:72 | end:95 | pic:3' GGGACG--CGGTAGAGGAGATG 5'& |||| |.|| .||||||.| &5' --CTGCATGTCACTTCCTCTGC 3' |
Spna2 | mmu-miR-325 | beg:175 | end:192 | pic:3' AACTATCCTCCACG-AGTTATTT 5'& ||||| |||||||| &5' ---------GGTGCTTCAATAAA 3' |
Spna2 | mmu-miR-1894-3p | beg:283 | end:304 | pic:3' GAGGGAAGTGGGAGAGGGAACG 5'& ||||||| ..||||.|| &5' CTCCCTTGTTTCTCTTCC---- 3' |