Trim31
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0004519mmu-let-7g*224762Trim31cguuccGUCACCGGACAUGUCa ||| || :||||||| gagaacCAGAGG-UUGUACAGa217341361[mm9:17:37047003-37047023:+]0.50411547-17.32-0.4433
MIMAT0004523mmu-miR-29b*224762Trim31auUUGGUGGUAUAC-UUUGGUcg || || || || |||||| aaAAGCAAAAU-UGUAAACCAcc321479500[mm9:17:37047141-37047162:+]0.50331330-12.83-0.1100
MIMAT0004547mmu-miR-203*224762Trim31acaacuugacaguucUUGGUGa |||||| aaaagcaaaauuguaAACCACc28479500[mm9:17:37047141-37047162:+]0.50331206-12.43-0.1316
MIMAT0000377mmu-miR-299*224762Trim31uacauacacccUGCCAUUUGGu |: ||||||| uuaaaagcaaaAUUGUAAACCa212477498[mm9:17:37047139-37047160:+]0.50341437-9.81-1.0562
MIMAT0004638mmu-miR-323-5p224762Trim31cgcuugcgcggugccUGGUGGa |||||| aaagcaaaauuguaaACCACC-28480500[mm9:17:37047142-37047162:+]0.50331206-12.53-0.1410
MIMAT0000593mmu-miR-344224762Trim31ugUCAGUCCGAAACCGA-UCUAGu | ||| |||| || ||||| ugACUCAUCCUUU-CCUGAGAUCu222318340[mm9:17:37046980-37047002:+]0.50821230-9.05-0.2535
MIMAT0004666mmu-miR-33*224762Trim31cacUACGUGACACCUU-UGUAAc | ||:|||| || ||||| gcaAGGCGCUGUCCAACACAUUg220258280[mm9:17:37046920-37046942:+]0.51231310-17.91-0.1007
MIMAT0003387mmu-miR-376a*224762Trim31ugAGUAUCU--UCCUCUUAGAUGg |::|||| ||| ||||||| guUUGUAGAUUUGGACAAUCUACa221388411[mm9:17:37047050-37047073:+]0.50381637-18.57-0.9586
MIMAT0002105mmu-miR-464224762Trim31auAGAGUGUC-UUAUUUGAACCAu |:|: ||| : |: ||||||| ggUUUUUCAGUGCUGCACUUGGUa222187210[mm9:17:37046849-37046872:+]0.55221567-17.08-0.3584
MIMAT0003190mmu-miR-291b-3p224762Trim31uguuuguuUUACCUACGUGAAa |:| | ||||||| gguuuuucAGU-GCUGCACUUg215187207[mm9:17:37046849-37046869:+]0.55221447-9.97-0.1110
MIMAT0003464mmu-miR-686224762Trim31agaaguggcagacccUUCGUUa |||||| cugucuucuaauuaaAAGCAAa28466487[mm9:17:37047128-37047149:+]0.50341206-9.33-0.1495
MIMAT0003504mmu-miR-713224762Trim31cgaCACACGGAAGUCACGu | | ::|||||||| cacGAGGUUUUUCAGUGCu217182200[mm9:17:37046844-37046862:+]0.55221487-15.10-0.5180
MIMAT0003782mmu-miR-676224762Trim31ucGAGUUGUUG--GAGUCCUGCc | || | |: ||||||||| uuCCCACCUAUCACUCAGGACGg2203052[mm9:17:37046692-37046714:+]0.50791547-23.21-0.2434
MIMAT0004839mmu-miR-743b-5p224762Trim31acUAC-CUGUGGUCAGACU-UGu :|| |:| |:| ||||| || aaGUGUGGCCCUACUCUGACACu2207597[mm9:17:37046737-37046759:+]0.51901220-14.51-0.4548
MIMAT0004856mmu-miR-105224762Trim31ugGUG-UUCGUAGACU-----CGUGAACc ||| |:|: |:| | ||||||| uaCACGAGGUUUUUCAGUGCUGCACUUGg222180208[mm9:17:37046842-37046870:+]0.55221437-22.77-0.3545
MIMAT0004871mmu-miR-465b-5p224762Trim31guCUAGUCGUGGUAAGAU-UUAu |||: | | || |||| ||| uaGAUUUGGA-CAAUCUACAAUc221393414[mm9:17:37047055-37047076:+]0.50381220-8.72-0.8277
MIMAT0004873mmu-miR-465c-5p224762Trim31guCUAGUCGCGGUAAGAU-UUAu |||: | | || |||| ||| uaGAUUUG-GACAAUCUACAAUc221393414[mm9:17:37047055-37047076:+]0.50381220-7.53-0.8348
MIMAT0004884mmu-miR-466h224762Trim31augUGUGUUCGUGUAC-GUGUGu |||| :||||| ||||| cugACAC-UCUACAUGCCACACa22090111[mm9:17:37046752-37046773:+]0.49971250-21.40-0.9661
MIMAT0004938mmu-miR-875-3p224762Trim31guAUCGGAG-UCAUAAAAGUCc || | | || ||||||| acUAUACACGAGGUUUUUCAGu220176197[mm9:17:37046838-37046859:+]0.55221467-9.40-0.4431
MIMAT0005292mmu-miR-582-3p224762Trim31aacccaAGUCAACAAGUUGUCc ||| | ||||||| acuuugUCA--UCCUCAACAGc217445464[mm9:17:37047107-37047126:+]0.50361417-8.56-0.3585
MIMAT0005848mmu-miR-466j224762Trim31aaugUGUGUACGUGUAC-GUGUGu |||| | :||||| ||||| ucugACAC-UCUACAUGCCACACa22089111[mm9:17:37046751-37046773:+]0.49971330-21.40-0.9630
MIMAT0005857mmu-miR-1196224762Trim31uccgucuccgucCAUCUAAa ||||||| aaugccccguuuGUAGAUUu29380399[mm9:17:37047042-37047061:+]0.50411407-9.41-0.5712
MIMAT0007868mmu-miR-1903224762Trim31acaGAGUCCUUCUUCUUCU-UCc | || | || |||||| || uccCCCAAGUAG-AGAAGACAGu220138159[mm9:17:37046800-37046821:+]0.55221210-8.29-0.3564
MIMAT0007871mmu-miR-1892224762Trim31uaggagggagggcaGGGGUUUa ||||||| gacaguggaauaccCCCCAAAg29154175[mm9:17:37046816-37046837:+]0.55221407-12.30-0.2429
MIMAT0007872mmu-miR-1906224762Trim31ucGGGACG-GAGUCCGACGACGu :|| | | : ||||||||| ugUCCAACACAUUGGCUGCUGCu221267289[mm9:17:37046929-37046951:+]0.51231517-23.72-0.3097
MIMAT0007876mmu-miR-1907224762Trim31uggagGUCUAGGAGACGACGAg || ||: |||||||| uccaaCACAUUGGCUGCUGCUu218269290[mm9:17:37046931-37046952:+]0.51231577-21.25-0.2066
MIMAT0009390mmu-miR-1927224762Trim31agucagGGAUUGUAGGUCUCCAg :||:| | |||||||| cugagaUCUGAGAACCAGAGGUu218332354[mm9:17:37046994-37047016:+]0.50411617-22.37-0.2581
MIMAT0009402mmu-miR-1938224762Trim31cuggcuugauguucAGGGUGGc ||||||| guuccucagucucuUCCCACCu291738[mm9:17:37046679-37046700:+]0.48161407-13.18-0.3696
MIMAT0009431mmu-miR-1958224762Trim31ugAAUGACGAAGGUGAAAGGAu ||:: || : ||||||| ucUUGUGACUCAUCCUUUCCUg221313334[mm9:17:37046975-37046996:+]0.50821487-16.93-0.3034
MIMAT0000124mmu-miR-15b224762Trim31acauUUG-GUACUACACGACGAu ||| ||| : ||||||| guccAACACAUUGGCUGCUGCUu219268290[mm9:17:37046930-37046952:+]0.51231537-15.00-0.2085
MIMAT0004528mmu-miR-125a-3p224762Trim31ccgAGGGU-UCUUGGAGUGGACa | ||| | || ||||||| acaUGCCACACAA--UCACCUGa220100120[mm9:17:37046762-37046782:+]0.52601477-15.95-0.9823
MIMAT0000148mmu-miR-136224762Trim31gguaguaGUUUUGUUUACC-UCa ::|:|||||||| || gacgggaUGAGACAAAUGGUAGa2164870[mm9:17:37046710-37046732:+]0.53621270-16.95-0.6465
MIMAT0000151mmu-miR-140224762Trim31gaUGGUAUCCCAUUUUGGUGac :| | | || ||||||| aaGCAAAAUUGU-AAACCACc-321481500[mm9:17:37047143-37047162:+]0.50331300-10.86-0.1123
MIMAT0000223mmu-miR-193224762Trim31ugACCCUGAAACAUCCGGUCAa | | || || ||||||| ggUUGUACAGAGUCGGCCAGUu221351372[mm9:17:37047013-37047034:+]0.50411527-16.01-0.2133
MIMAT0000225mmu-miR-195224762Trim31cgGUUAUAAAGAC-ACGACGAu ||| | |: | ||||||| ucCAACACAUUGGCUGCUGCUu220269290[mm9:17:37046931-37046952:+]0.51231507-17.80-0.2066
MIMAT0000236mmu-miR-203224762Trim31gaucaccaGGAUUUGUAAAGUg ::| :|||||||| auaaaaccUUUUGACAUUUCAa215419440[mm9:17:37047081-37047102:+]0.50361507-14.46-1.0771
MIMAT0000526mmu-miR-15a224762Trim31guGUUUGGUAAUACACGACGAu ||| ||||: ||||||| ucCAACACAUUGGCUGCUGCUu221269290[mm9:17:37046931-37046952:+]0.51231647-17.61-0.2066
MIMAT0000527mmu-miR-16224762Trim31gcGGUUAU-AAAUGCACGACGAu |||| | ||: ||||||| guCCAACACAUUGGCUGCUGCUu221268290[mm9:17:37046930-37046952:+]0.51231557-16.97-0.2066
MIMAT0000538mmu-miR-31224762Trim31gucgauaCGGUCGUAGA-ACGGa |||||: ||| |||| agagucgGCCAGU-UCUGUGCCa216359380[mm9:17:37047021-37047042:+]0.50411210-19.28-0.2674
MIMAT0000541mmu-miR-96224762Trim31ucguuuuuaCACGAUCACGGUUu || || ||||||| agucggccaGUUCU-GUGCCAAu215361382[mm9:17:37047023-37047044:+]0.50411487-13.31-0.3649
MIMAT0000548mmu-miR-322224762Trim31agGUUUUGUACUUAACGACGAc ||| |||| :: ||||||| ucCAACACAUUGGCUGCUGCUu221269290[mm9:17:37046931-37046952:+]0.51231687-21.42-0.2047
MIMAT0000661mmu-miR-214224762Trim31ugacGGACAGAC-ACGGACGACa :||| ||| ||||||| agcuUCUGGCUGCACCCUGCUGa219226248[mm9:17:37046888-37046910:+]0.51231537-23.07-0.3063
MIMAT0000664mmu-miR-219224762Trim31ucuuAACG-C-AAACCUGUUAGu |||: | ||||||||||| ccguUUGUAGAUUUGGACAAUCu218386408[mm9:17:37047048-37047070:+]0.50411637-17.29-0.4794
MIMAT0000673mmu-miR-181b224762Trim31ugGGUGGCUGUCGUUACUU-ACAa | | :|::|| |:|||| ||| gaCAAAUGGUAGAAGUGAAGUGUg2225881[mm9:17:37046720-37046743:+]0.53831290-15.13-0.2123
MIMAT0000677mmu-miR-7a224762Trim31uguuGUUUUAGUGAUCAGAAGGu ||| | | || ||||||: uccuCAACAGCUCU-GUCUUCUa220454475[mm9:17:37047116-37047137:+]0.50361410-17.83-0.1203
MIMAT0000678mmu-miR-7b224762Trim31uguuGUUUUAGUGUUCAGAAGGu ||| | | | ||||||: uccuCAACAGCUC-UGUCUUCUa220454475[mm9:17:37047116-37047137:+]0.50361330-17.06-0.1299
MIMAT0003130mmu-miR-486224762Trim31gagcccCGUCGAGUCAU-GUCCu ||| ||::||| |||| agugcuGCA-CUUGGUAGCAGGa217195216[mm9:17:37046857-37046878:+]0.55221220-19.85-0.3277
MIMAT0003182mmu-miR-494224762Trim31cuccaaAGGGCACAUACAAAGu || | || ||||||| acacaaUCACCUG-AUGUUUCc217107127[mm9:17:37046769-37046789:+]0.52601507-11.66-0.2033
MIMAT0003183mmu-miR-376c224762Trim31ugcACUUUAAAGGAGAU-ACAa || : ||:||||| ||| ggcUGCUGCUUUCUCUACUGUa219280301[mm9:17:37046942-37046963:+]0.51231220-10.16-1.0176
MIMAT0003374mmu-miR-302b224762Trim31gauGAUUUUGUACCUUCG-UGAAu :|:| |: | |||| |||| cuuUUGACAUUUCAAAGCAACUUu221426449[mm9:17:37047088-37047111:+]0.50361200-9.32-0.9163
MIMAT0003893mmu-miR-761224762Trim31acacaGUCAAAGUGGGACGACg ::| | |||||||||| gcuucUGGCUGCACCCUGCUGa218227248[mm9:17:37046889-37046910:+]0.51231617-23.24-0.3168
MIMAT0003453mmu-miR-497224762Trim31auGUUUGGUGUCAC--ACGACGAc | || |||| || ||||||| guCCAA-CACAUUGGCUGCUGCUu221268290[mm9:17:37046930-37046952:+]0.51231577-20.60-0.2124
MIMAT0004324mmu-miR-181d224762Trim31ugGGUGGCUGUUGUUACUU-ACAa | | :|::|: |:|||| ||| gaCAAAUGGUAGAAGUGAAGUGUg2225881[mm9:17:37046720-37046743:+]0.53831250-13.47-0.2123
MIMAT0004855mmu-miR-876-3p224762Trim31acuuaaugaAACAUUUGGUGau ||||||||||| aaagcaaaaUUGUAAACCACc-314480500[mm9:17:37047142-37047162:+]0.50331450-15.30-0.1100
MIMAT0004859mmu-miR-193b224762Trim31ucgcCCUGAAACACCCGGUCAa | || || ||||||| gguuGUACAGAGUCGGCCAGUu219351372[mm9:17:37047013-37047034:+]0.50411507-15.53-0.2133
DNA & RNA Element - TRANSFAC
AccessionASDescriptionSpeciesEntrezPubmedBinding Info
G070325Trim31Mus musculus224762
DNA & RNA Element - RepTar
Gene NamemiRNABeginEndProfile
Trim31mmu-miR-1927beg:335end:355pic:3' AGTCAGGGATTGTAGGTCTCCAG 5'& .||.| | ||||||||. &5' ------TCTGAGAACCAGAGGTT 3'
Trim31mmu-miR-676beg:40end:53pic:3' TCGAGTTGTTGGAGTCCTGCC 5'& |||||||||| &5' -----------CTCAGGACGG 3'
Trim31mmu-miR-203beg:422end:440pic:3' GATCACCAGGAT--TTGTAAAGTG 5'& ||| .|||||||| &5' --------CCTTTTGACATTTCA- 3'
Trim31mmu-miR-2140beg:224end:242pic:3' TGGTGGTT-CTAGACGTGGA 5'& .|. |. ||||||| &5' ---GCTTCTGG-CTGCACC- 3'
Trim31mmu-miR-193bbeg:359end:373pic:3' TCGCCCTGAAACACCCGGTCAA 5'& || |||||||| &5' -----------GTCGGCCAGTT 3'
Trim31mmu-miR-193beg:359end:373pic:3' TGACCCTGAAACATCCGGTCAA 5'& || |||||||| &5' -----------GTCGGCCAGTT 3'
Trim31mcmv-miR-m01-3starbeg:6end:24pic:3' CGGCACTTCGCT--CGCAAGGAGC 5'& || |.||||||| &5' --------GCTTGTGTGTTCCTC- 3'
Trim31mcmv-miR-m108-1beg:205end:226pic:3' GCTGTGC-TCGG--TGGCAGTCTTT 5'& | ||| ||| ||||||| &5' ------GTAGCAGGACC-TCAGAAA 3'
Trim31mmu-let-7c-1starbeg:338end:361pic:3' CCTTTCGATCTTCCAACATGTC 5'& ||.| | || ||||||||||| &5' -GAGAACCAG-AGGTTGTACAG 3'
Trim31mmu-miR-101bbeg:284end:302pic:3' AAGTCGATAGTGTCATGACAT 5'& ||| || | ||||||| &5' ----GCTTTCTC--TACTGTA 3'
Trim31mmu-miR-105beg:191end:209pic:3' TGGTGTT-CGTAGACTCGTGAACC 5'& ||. || |||||||| &5' ----CAGTGCT-----GCACTTGG 3'
Trim31mmu-miR-122beg:78end:101pic:3' GTTTGTGGTAAC-AGTGTGAGGT 5'& ..| || | ||||||.| &5' --GGC-CCTACTCTGACACTCTA 3'
Trim31mmu-miR-141starbeg:189end:212pic:3' AGGTTGTGACGTG-ACCTTCTAC 5'& |.||. |||||| ||| || &5' TTCAGTGCTGCACTTGGTAG--- 3'
Trim31mmu-miR-144beg:283end:302pic:3' TCATGTAGTAGATATGACAT 5'& |.| ||| ||||||| &5' --TGCTT--TCTCTACTGTA 3'
Trim31mmu-miR-150starbeg:359end:381pic:3' GATAGGGGGTCCGGACATGGTC 5'& .|| |||| ||||.||| &5' --GTCGGCCAGTTCTGTGCCA- 3'
Trim31mmu-miR-15abeg:268end:290pic:3' GTGTTTGGTAATACACGACGAT 5'& ||| ||||. ||||||| &5' --CAACACATTGGCTGCTGCT- 3'
Trim31mmu-miR-16beg:274end:290pic:3' GCGGTTATAAATGCACGACGAT 5'& ||| .| ||||||| &5' -------ATTGGC-TGCTGCT- 3'
Trim31mmu-miR-184beg:450end:472pic:3' TGGGAATAGTCAAGAGGCAGGT 5'& |.||| ||| |||.|||. &5' ATCCTCAACAG--CTCTGTCT- 3'
Trim31mmu-miR-1904beg:196end:218pic:3' GGAGGGAGGTCT-CC-TCGTCTTG 5'& || || || |||||.|| &5' -----CTGCACTTGGTAGCAGGAC 3'
Trim31mmu-miR-1906beg:267end:289pic:3' TCGGGACGGAGT-CCGACGACGT 5'& |.|| | ||||||||| &5' -GTCCAACACATTGGCTGCTGC- 3'
Trim31mmu-miR-1907beg:267end:291pic:3' TGGAGGTCTAGGAGACGACGAG 5'& || || ||. ||||||||. &5' -CCAACACATTGGCTGCTGCTT 3'
Trim31mmu-miR-1927beg:237end:258pic:3' AGTCAGGGATTGTAG-GTCTCCAG 5'& ||||. |||.||| &5' -----CCCTGCTGACACAGGGGT- 3'
Trim31mmu-miR-1935beg:450end:472pic:3' TCTCTAGGCG--GTCGGAGACGGA 5'& |||| ||| |||||.|| &5' ----ATCCTCAACAG-CTCTGTCT 3'
Trim31mmu-miR-1938beg:28end:38pic:3' CTGGCTTGATGTTCAGGGTGGC 5'& ||||||| &5' --------------TCCCACC- 3'
Trim31mmu-miR-1941-5pbeg:123end:142pic:3' TTCGGAGACATGGTCGTAGAGGGA 5'& ||||| || .|||||| &5' ---CCTCTC--CCT--GTCTCCC- 3'
Trim31mmu-miR-1953beg:277end:295pic:3' GTCTTCGGACTCTTGAAAGGGT 5'& | ||| .|||||.| &5' -----GGCTGCT-GCTTTCTC- 3'
Trim31mmu-miR-1958beg:311end:335pic:3' TGAATGACGAAGGT-GAAAGGAT 5'& |||. || || |||||||. &5' -CTTG-TGACTCATCCTTTCCTG 3'
Trim31mmu-miR-1970beg:230end:253pic:3' GTTTCGGATAGGGGTCACTGTGT 5'& .||. |||. ||||||| &5' ---GGCTGCACCCTGCTGACACA 3'
Trim31mmu-miR-199bstarbeg:259end:282pic:3' CTTGTCCAT--CAGATT-TGTGACCC 5'& ||| ||| || |||.||| &5' ----AGGCGCTGTCCAACACATTGG- 3'
Trim31mmu-miR-2135beg:202end:221pic:3' CAAAGCCGGGGTTCTGGAGA 5'& |.||. ||.|||||| &5' ---TTGGTAGCAGGACCTC- 3'
Trim31mmu-miR-2140beg:190end:207pic:3' TGGTGGTTCTAGACGTGGA 5'& .||. ||||||.| &5' ----TCAGTG-CTGCACTT 3'
Trim31mmu-miR-2145beg:227end:247pic:3' TTGGTCCGGGCTGGGACGA 5'& .| |||. |||||||| &5' --TCTGGCTGCACCCTGCT 3'
Trim31mmu-miR-2146beg:276end:298pic:3' GTGTACCT-TG--GGAAGAGGTG 5'& ||| .| |.|||||.|| &5' ----TGGCTGCTGCTTTCTCTAC 3'
Trim31mmu-miR-219beg:387end:408pic:3' TCTTAACG-C-AAACCTGTTAGT 5'& |||. | ||||||||||| &5' ----TTGTAGATTTGGACAATC- 3'
Trim31mmu-miR-291b-3pbeg:192end:207pic:3' TGTTTGTTTTACCTACGTGAAA 5'& |.|| ||||||| &5' --------AGTGC-TGCACTT- 3'
Trim31mmu-miR-29astarbeg:336end:361pic:3' GACTTGTGGTTTTCTTTA-GTCA 5'& ||||. ||||.|.| .| ||| &5' CTGAGAACCAGAGGTTGTACAG- 3'
Trim31mmu-miR-322beg:268end:290pic:3' AGGTTTTGTACTTAACGACGAC 5'& ||||| |||| . ||||||| &5' TCCAACACATTGGCTGCTGCT- 3'
Trim31mmu-miR-324-5pbeg:240end:260pic:3' TGTGGTTACGGGATC--CCCTACGC 5'& || |||. |||.||| &5' ---CC--TGCTGACACAGGGGTGC- 3'
Trim31mmu-miR-327beg:16end:32pic:3' TAGGAGTACGGGGAGTTCA 5'& |||||| |.|.||. &5' -TCCTCA-GTCTCTT---- 3'
Trim31mmu-miR-342-5pbeg:234end:244pic:3' GAGTTAGTGTCTATCGTGGGGA 5'& ||||||. &5' --------------GCACCCT- 3'
Trim31mmu-miR-376astarbeg:389end:411pic:3' TGAGTATCTT--CCTCTTAGATGG 5'& | |||| ||| ||||||| &5' --TTGTAGATTTGGACAATCTAC- 3'
Trim31mmu-miR-381beg:0end:18pic:3' TGTCTCTCGAACG-G-GAACATAT 5'& .|| ||| | |||||.|. &5' ------GGC-TGCTCGCTTGTGTG 3'
Trim31mmu-miR-383beg:101end:127pic:3' TCGGTGTC--AGTGGAAGACT-AGA 5'& |||||| |||||| || || &5' -GCCACACAATCACCTGATGTTTC- 3'
Trim31mmu-miR-431beg:198end:218pic:3' ACGTACTGCCGGACGTTCTGT 5'& ||| .||. |||.||| &5' -GCACT-TGGTA-GCAGGAC- 3'
Trim31mmu-miR-450a-3pbeg:439end:461pic:3' TACTTACGTTT---C-GTAGGGGTTA 5'& |||| | |||||.||| &5' ------GCAACTTTGTCATCCTCAA- 3'
Trim31mmu-miR-467cbeg:193end:207pic:3' GTGTATATGTACGTGCGTGAAT 5'& .||| .||||||. &5' ---------GTGC-TGCACTTG 3'
Trim31mmu-miR-503beg:274end:290pic:3' GACGTCATGACAAGGGCGACGAT 5'& |.|| |.|||||| &5' -------ATTGG--CTGCTGCT- 3'
Trim31mmu-miR-540-3pbeg:209end:237pic:3' GGTCCT--AGC-----TGGAGACTGGA 5'& ||||| || .|.||||.|. &5' -CAGGACCTCAGAAAAGCTTCTGGCT- 3'
Trim31mmu-miR-674beg:177end:200pic:3' ATGTGGTGAGGGTAGAGTCACG 5'& ||||| | .. |.||||||| &5' TACACGAGGTT--TTTCAGTGC 3'
Trim31mmu-miR-682beg:218end:240pic:3' GTCTGAAGTGAC-ACTGACGTC 5'& |||| .|| ||.||||| &5' CAGAAAA-GCTTCTGGCTGCA- 3'
Trim31mmu-miR-705beg:18end:38pic:3' ACGGGTGGGGTGGAGGGTGG 5'& |.|| .|. |.||||||| &5' --CTCAGTCT-CTTCCCACC 3'
Trim31mmu-miR-706beg:180end:195pic:3' AAAAAACTCTGTCCCAAAGAGA 5'& ||. |||||.|| &5' ---------ACGAGGTTTTTC- 3'
Trim31mmu-miR-708beg:215end:233pic:3' GGGTCGATCTAACATTCGAGGAA 5'& |.||| |||||.|| &5' CTCAGAA-------AAGCTTCT- 3'
Trim31mmu-miR-709beg:451end:474pic:3' AGGAGGACG-GAGACGGAGG 5'& ||||| |||||.||.| &5' TCCTCAACAGCTCTGTCTTC 3'
Trim31mmu-miR-709beg:122end:141pic:3' AGGAGGACGGAGACGGAGG 5'& |||||. || |||.|||| &5' TCCTCT--CC-CTGTCTCC 3'
Trim31mmu-miR-713beg:185end:200pic:3' CGACACACGGAAGTCACGT 5'& || ..|||||||| &5' -----GT-TTTTCAGTGC- 3'
Trim31mmu-miR-713beg:6end:27pic:3' CG-ACACACGGA-AGTCACGT 5'& || ||||||.. ||||| &5' GCTTGTGTGTTCCTCAGT--- 3'
Trim31mmu-miR-744beg:370end:390pic:3' ACGACAATCGGGATCGGGGCGT 5'& |||| ||| ||||||. &5' --CTGT--GCCAATGCCCCGT- 3'
Trim31mmu-miR-761beg:227end:248pic:3' ACACAGTCAAA-GTGGGACGACG 5'& || | |||||||||| &5' ----TCTGGCTGCACCCTGCTG- 3'
Trim31mmu-miR-7abeg:455end:476pic:3' TGTTGTTTTAGTGATCAGAAGGT 5'& ||||| | || ||||||.| &5' -CAACAG---CTCT-GTCTTCTA 3'
Trim31mmu-miR-7bbeg:455end:476pic:3' TGTTGTTTTAGTGTTCAGAAGGT 5'& |||||. || ||||||.| &5' -CAACAGC-TCT---GTCTTCTA 3'
Trim31mmu-miR-883a-5pbeg:276end:302pic:3' CATTGACGATG-AAGAGAGT-CGT 5'& |..|||||.| |||||| |.| &5' -TGGCTGCTGCTTTCTCTACTGTA 3'
Trim31mmu-miR-92astarbeg:22end:39pic:3' CATTACGGTGGTTAGGGGTGGA 5'& |.| |. .||||||| &5' -----GTCTCT---TCCCACCT 3'
Trim31mmu-miR-599beg:241end:253pic:3' CAAACTATTTGACTGTGTT 5'& .||||||||. &5' ---------GCTGACACAG 3'
Trim31mmu-let-7gstarbeg:344end:361pic:3' CGTTCCGTCACCGGACATGTCA 5'& ||| || .||||||| &5' ------CAGAGG-TTGTACAG- 3'
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
Trim31RAID00088920mmu-miR-214-3pmiRNAMIMAT0000661Trim31mRNA224762Prediction0.1828
Trim31RAID00194810mmu-miR-203-3pmiRNAMIMAT0000236Trim31mRNA224762Prediction0.1828
Trim31RAID00595328mmu-miR-1934-3pmiRNAMIMAT0017341Trim31mRNA224762Prediction0.1828
Trim31RAID00734528mmu-miR-6960-5pmiRNAMIMAT0027820Trim31mRNA224762Prediction0.1828
Trim31RAID00850397mmu-miR-1938miRNAMIMAT0009402Trim31mRNA224762Prediction0.1828
Trim31RAID00932995mmu-miR-6913-5pmiRNAMIMAT0027726Trim31mRNA224762Prediction0.1828
Trim31RAID01003702mmu-miR-195a-5pmiRNAMIMAT0000225Trim31mRNA224762Prediction0.1828
Trim31RAID01018843mmu-miR-96-5pmiRNAMIMAT0000541Trim31mRNA224762Prediction0.1828
Trim31RAID01119471mmu-miR-7b-5pmiRNAMIMAT0000678Trim31mRNA224762Prediction0.1828
Trim31RAID01161496mmu-miR-6971-5pmiRNAMIMAT0027844Trim31mRNA224762Prediction0.1828
Trim31RAID01218142mmu-miR-7027-5pmiRNAMIMAT0027958Trim31mRNA224762Prediction0.1828
Trim31RAID01325305mmu-miR-140-5pmiRNAMIMAT0000151Trim31mRNA224762Prediction0.1828
Trim31RAID01355766mmu-miR-136-5pmiRNAMIMAT0000148Trim31mRNA224762Prediction0.1828
Trim31RAID01536641mmu-miR-7010-5pmiRNAMIMAT0027924Trim31mRNA224762Prediction0.1828
Trim31RAID01703637mmu-miR-497a-5pmiRNAMIMAT0003453Trim31mRNA224762Prediction0.1828
Trim31RAID01735109mmu-miR-761miRNAMIMAT0003893Trim31mRNA224762Prediction0.1828
Trim31RAID01996056mmu-miR-181b-5pmiRNAMIMAT0000673Trim31mRNA224762Prediction0.1828
Trim31RAID02132646mmu-miR-7a-5pmiRNAMIMAT0000677Trim31mRNA224762Prediction0.1828
Trim31RAID02164389mmu-miR-676-3pmiRNAMIMAT0003782Trim31mRNA224762Prediction0.1828
Trim31RAID02241286mmu-miR-876-3pmiRNAMIMAT0004855Trim31mRNA224762Prediction0.1828
Trim31RAID02315908mmu-miR-15a-5pmiRNAMIMAT0000526Trim31mRNA224762Prediction0.1828
Trim31RAID02445652mmu-miR-486a-5pmiRNAMIMAT0003130Trim31mRNA224762Prediction0.1828
Trim31RAID02466693mmu-miR-31-5pmiRNAMIMAT0000538Trim31mRNA224762Prediction0.1828
Trim31RAID02545885mmu-miR-181d-5pmiRNAMIMAT0004324Trim31mRNA224762Prediction0.1828
Trim31RAID02554214mmu-miR-193a-3pmiRNAMIMAT0000223Trim31mRNA224762Prediction0.1828
Trim31RAID02568519mmu-miR-6924-5pmiRNAMIMAT0027748Trim31mRNA224762Prediction0.1828
Trim31RAID02581970mmu-miR-7028-3pmiRNAMIMAT0027961Trim31mRNA224762Prediction0.1828
Trim31RAID02605501mmu-miR-15b-5pmiRNAMIMAT0000124Trim31mRNA224762Prediction0.1828
Trim31RAID02654004mmu-miR-6954-3pmiRNAMIMAT0027809Trim31mRNA224762Prediction0.1828
Trim31RAID02730575mmu-miR-322-5pmiRNAMIMAT0000548Trim31mRNA224762Prediction0.1828
Trim31RAID02758254mmu-miR-494-3pmiRNAMIMAT0003182Trim31mRNA224762Prediction0.1828
Trim31RAID02769870mmu-miR-376c-3pmiRNAMIMAT0003183Trim31mRNA224762Prediction0.1828
Trim31RAID03059959mmu-miR-193b-3pmiRNAMIMAT0004859Trim31mRNA224762Prediction0.1828
Trim31RAID03206126mmu-miR-302b-3pmiRNAMIMAT0003374Trim31mRNA224762Prediction0.1828
Trim31RAID03431084mmu-miR-125a-3pmiRNAMIMAT0004528Trim31mRNA224762Prediction0.1828
Trim31RAID03505198mmu-miR-219a-5pmiRNAMIMAT0000664Trim31mRNA224762Prediction0.1828
Trim31RAID03640126mmu-miR-7683-3pmiRNAMIMAT0029887Trim31mRNA224762Prediction0.1828
Trim31RAID03840900mmu-miR-16-5pmiRNAMIMAT0000527Trim31mRNA224762Prediction0.1828
Trim31RAID03944373mmu-miR-1247-5pmiRNAMIMAT0014800Trim31mRNA224762Prediction0.1828