DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT015760 mmu-miR-124-3p Mus musculus Dnaic1 68922 Mus musculus Microarray Functional MTI (Weak) 18619591

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0003896 mmu-miR-763 68922 Dnaic1 cggugaccaagaagGGUCGACc ||||||| ugcacaaauaaaggCCAGCUGg 2 9 152 173 [mm9:4:41585156-41585177:+] 0.5855 140 7 -19.57 -0.3963 MIMAT0004839 mmu-miR-743b-5p 68922 Dnaic1 acuACCUGUGGUCAGACUUGu || | :: ||||||| cccUGCUCCGUGUUCUGAACc 2 19 15 35 [mm9:4:41585019-41585039:+] 0.4533 142 7 -12.62 -0.1094 MIMAT0009435 mmu-miR-1962 68922 Dnaic1 uacACAGG-GUCACG-GUCGGAGa | ||| ::| | ||||||| cuuUCUCCAUGGCCCUCAGCCUCc 2 20 115 138 [mm9:4:41585119-41585142:+] 0.5048 145 7 -20.58 -0.6487 MIMAT0011221 mmu-miR-2145 68922 Dnaic1 uuGGUCCGGG-CUGGGACGa :| ||||| |||||||| agUCUGGCCCAGACCCUGCu 2 18 2 21 [mm9:4:41585006-41585025:+] 0.5010 164 7 -33.46 -0.1244 MIMAT0011222 mmu-miR-2146 68922 Dnaic1 guGUACCUUGGGAAGAGGUg |||| |||:||||||| ggCAUGCCACCUUUCUCCAu 2 19 105 124 [mm9:4:41585109-41585128:+] 0.5048 170 7 -25.56 -0.2540 MIMAT0013803 mmu-miR-2861 68922 Dnaic1 ggcGGGCGGCGGU-CCGGGg ||: :| ||| ||||| ccaCCUUUCUCCAUGGCCCu 2 17 111 130 [mm9:4:41585115-41585134:+] 0.5048 120 0 -24.04 -0.1124 MIMAT0000141 mmu-miR-130a 68922 Dnaic1 uacGGGAAAAU---UGUAACGUGac || || || | |||||| ccuCCAUUAUACCCUCUUUGCACaa 3 20 134 158 [mm9:4:41585138-41585162:+] 0.5452 126 0 -11.97 -0.1133 MIMAT0000233 mmu-miR-200b 68922 Dnaic1 agUAGUAAUGGU--CCGUCAUAAu | | | |||| ||||||| ucACCCUGACCAAUCCCAGUAUUu 2 21 57 80 [mm9:4:41585061-41585084:+] 0.4055 147 7 -12.48 -0.2490 MIMAT0004576 mmu-miR-296-3p 68922 Dnaic1 ccuCUCGGAGGUGGGU-UGGGAg |||:|| :|||| ||||| ---GAGUCU-GGCCCAGACCCUg 2 20 1 19 [mm9:4:41585005-41585023:+] 0.5010 129 0 -22.44 -0.1437 MIMAT0000379 mmu-miR-301a 68922 Dnaic1 cgAAACUGUUAUGAUAACGUGac || || | || |||||| caUUAUACCCU-CU-UUGCACaa 3 22 138 158 [mm9:4:41585142-41585162:+] 0.5452 125 0 -7.39 -0.1028 MIMAT0000387 mmu-miR-130b 68922 Dnaic1 uacGGGAAAGU---AGUAACGUGac || || :| || |||||| ccuCCAUUAUACCCUCUUUGCACaa 3 20 134 158 [mm9:4:41585138-41585162:+] 0.5452 130 0 -11.97 -0.1111 MIMAT0000513 mmu-miR-19b 68922 Dnaic1 agucaaaacguaccuAAACGUGu ||||||| cuccauuauacccucUUUGCACa 2 9 135 157 [mm9:4:41585139-41585161:+] 0.5452 140 7 -8.97 -0.9172 MIMAT0000651 mmu-miR-19a 68922 Dnaic1 agucaaaacguaucuAAACGUGu ||||||| cuccauuauacccucUUUGCACa 2 9 135 157 [mm9:4:41585139-41585161:+] 0.5452 140 7 -8.97 -0.9172 MIMAT0000657 mmu-miR-200c 68922 Dnaic1 agGUAGUAAUGG--GCCGUCAUAAu || | | ||| : ||||||| cuCACCCUGACCAAUCCCAGUAUUu 2 22 56 80 [mm9:4:41585060-41585084:+] 0.4055 148 7 -13.29 -0.2490 MIMAT0001537 mmu-miR-429 68922 Dnaic1 ugccGUAAUGGU--CUGUCAUAAu | | |||| ||||||| ucacCCUGACCAAUCCCAGUAUUu 2 19 57 80 [mm9:4:41585061-41585084:+] 0.4055 145 7 -11.50 -0.2490 MIMAT0003128 mmu-miR-485 68922 Dnaic1 cuuAAGUAGUGCCG---GUCGGAGa ||| ||:||| ||||||| ccuUUCUCCAUGGCCCUCAGCCUCc 2 20 114 138 [mm9:4:41585118-41585142:+] 0.5048 158 7 -24.79 -0.6412 MIMAT0004186 mmu-miR-301b 68922 Dnaic1 cgaaacUGUUAUG---GUAACGUGac |: |||| | |||||| gccuccAUUAUACCCUCUUUGCACaa 3 18 133 158 [mm9:4:41585137-41585162:+] 0.5452 128 0 -11.23 -0.1111

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G038969 Dnaic1 Mus musculus 68922 19536157 0 0 R51644; MOUSE$DNAIC1_01; Binding factors: mmu-miR-133a-3p , mmu-miR-133b-3p , mmu-miR-9-5p // 0 0 R51645; MOUSE$DNAIC1_02; Binding factors: mmu-miR-15a-5p , mmu-miR-15b-5p , mmu-miR-16-5p , mmu-miR-195a-5p , mmu-miR-503-5p

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Dnaic1 mmu-miR-1962 beg:120 end:138 pic:3' TACACAGGGTCACGGTCGGAGA 5'& ||| ||| .||||||| &5' ATGG--CCC----TCAGCCTC- 3' Dnaic1 mmu-miR-763 beg:163 end:174 pic:3' CGGTGACCAAGAAGGGTCGACC 5'& |||||||| &5' --------------CCAGCTGG 3' Dnaic1 mcmv-miR-M23-2 beg:121 end:141 pic:3' GGCGAACTGGCTC-CGGGGGTA 5'& ||.|| |||.|||| &5' -----TGGCCCTCAGCCTCCAT 3' Dnaic1 mghv-miR-M1-7-5p beg:103 end:119 pic:3' TCCAATGGCGTGGAGGTGGAAA 5'& |||. |||||||| &5' --------GCATG-CCACCTTT 3' Dnaic1 mghv-miR-M1-8 beg:61 end:84 pic:3' CTGGTTTGGGGGTCACTCACGA 5'& |||||| .|||||| |||| &5' GACCAA--TCCCAGTATTTGCT 3' Dnaic1 mmu-let-7a beg:41 end:60 pic:3' TTGATATGTTGGATG-ATGGAGT 5'& .||| || |.||||| &5' ------GCAAGG-ACGTGCCTCA 3' Dnaic1 mmu-let-7b beg:41 end:60 pic:3' TTGGTGTGTTGGATG-ATGGAGT 5'& .||| || |.||||| &5' ------GCAAGG-ACGTGCCTCA 3' Dnaic1 mmu-let-7c beg:38 end:60 pic:3' TTGGTATGTTGGATG-ATGGAGT 5'& || .||| || |.||||| &5' ---CAAGCAAGG-ACGTGCCTCA 3' Dnaic1 mmu-let-7f beg:41 end:60 pic:3' TTGATATGTTAGATG-ATGGAGT 5'& .||| || |.||||| &5' ------GCAAGG-ACGTGCCTCA 3' Dnaic1 mmu-let-7g beg:41 end:60 pic:3' TTGACATGTTTGATG-ATGGAGT 5'& .|||. || |.||||| &5' ------GCAAGG-ACGTGCCTCA 3' Dnaic1 mmu-let-7i beg:40 end:60 pic:3' TTGTCGTGTTTGATGATGGAGT 5'& |||| .|| |.||||| &5' ---AGCAAGGACG--TGCCTCA 3' Dnaic1 mmu-miR-1186b beg:58 end:75 pic:3' CACCACGTACGGAAA--TTAGGGT 5'& ||| ||||||| &5' ----------CCTGACCAATCCCA 3' Dnaic1 mmu-miR-1971 beg:1 end:21 pic:3' AGAGTCGGGTC-GGAAATG 5'& ||| .|||||| || |.| &5' TCT-GGCCCAGACCC-TGC 3' Dnaic1 mmu-miR-19a beg:147 end:158 pic:3' AGTCAAAACGTATCTAAACGTGT 5'& |||||||| &5' ---------------TTTGCACA 3' Dnaic1 mmu-miR-19b beg:147 end:158 pic:3' AGTCAAAACGTACCTAAACGTGT 5'& |||||||| &5' ---------------TTTGCACA 3' Dnaic1 mmu-miR-2145 beg:1 end:22 pic:3' TTGGTCCGGG-CTGGGACGA 5'& .| ||||| ||||||||| &5' --TCTGGCCCAGACCCTGCT 3' Dnaic1 mmu-miR-2146 beg:103 end:125 pic:3' GTGTACCTTGGGAAGAGGTG 5'& .|||| |||.|||||||. &5' -GCATGCCACCTTTCTCCAT 3' Dnaic1 mmu-miR-29bstar beg:151 end:171 pic:3' ATTTGGTGGTATACTTTGGTCG 5'& ||| |..||||| &5' -----CACAAATAAAGGCCAGC 3' Dnaic1 mmu-miR-30c-2star beg:70 end:91 pic:3' TCTCATTTGTCG-----GAAGAGGGTC 5'& |||. |||.||.|| &5' --------CAGTATTTGCTTTTCTCA- 3' Dnaic1 mmu-miR-327 beg:82 end:105 pic:3' TAGGAGT---ACGGGGAGTTCA 5'& |.|||| || |.||.||| &5' -TTCTCATTCTGGCTCTTAAG- 3' Dnaic1 mmu-miR-449b beg:162 end:178 pic:3' CGGTCGATTGTTGTGACGGA 5'& |||||||. .||||| &5' GCCAGCTG--GACACT---- 3' Dnaic1 mmu-miR-542-5p beg:46 end:66 pic:3' AGCACTGTACTACTAGGGGCTC 5'& |||.|| |||.|| &5' ----GACGTGCCTCACCCTGA- 3' Dnaic1 mmu-miR-672 beg:115 end:138 pic:3' AGTGTGTGTCATGTGGTTGGAGT 5'& || | ||..| | .||.|||| &5' TCTC-CATGGCCC-TCAGCCTC- 3' Dnaic1 mmu-miR-743b-5p beg:16 end:35 pic:3' ACTACCTGTGGT-C-AGACTTGT 5'& .| ||. | ||||||| &5' ------GCTCCGTGTTCTGAAC- 3' Dnaic1 mmu-miR-98 beg:41 end:60 pic:3' TTGTTATGTTGAATG-ATGGAGT 5'& .||| || |.||||| &5' ------GCAAGG-ACGTGCCTCA 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Dnaic1 RAID00066885 mmu-miR-485-5p miRNA MIMAT0003128 Dnaic1 mRNA 68922 Prediction 0.1828 Dnaic1 RAID00510328 mmu-miR-130a-3p miRNA MIMAT0000141 Dnaic1 mRNA 68922 Prediction 0.1828 Dnaic1 RAID00762755 mmu-miR-19b-3p miRNA MIMAT0000513 Dnaic1 mRNA 68922 Prediction 0.2381 Dnaic1 RAID00799598 mmu-miR-200c-3p miRNA MIMAT0000657 Dnaic1 mRNA 68922 Prediction 0.1828 Dnaic1 RAID01451143 mmu-miR-124-3p miRNA MIMAT0000134 Dnaic1 mRNA 68922 Microarray 0.5483 Dnaic1 RAID01552032 mmu-miR-19a-3p miRNA MIMAT0000651 Dnaic1 mRNA 68922 Prediction 0.2202 Dnaic1 RAID02409379 mmu-miR-301b-3p miRNA MIMAT0004186 Dnaic1 mRNA 68922 Prediction 0.1828 Dnaic1 RAID02458044 mmu-miR-301a-3p miRNA MIMAT0000379 Dnaic1 mRNA 68922 Prediction 0.1828 Dnaic1 RAID02580013 mmu-miR-130b-3p miRNA MIMAT0000387 Dnaic1 mRNA 68922 Prediction 0.1828 Dnaic1 RAID03152083 mmu-miR-296-3p miRNA MIMAT0004576 Dnaic1 mRNA 68922 Prediction 0.1828 Dnaic1 RAID03551639 mmu-miR-200b-3p miRNA MIMAT0000233 Dnaic1 mRNA 68922 Prediction 0.1828 Dnaic1 RAID03990424 mmu-miR-429-3p miRNA MIMAT0001537 Dnaic1 mRNA 68922 Prediction 0.1828