SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs6361159 | snp | A/G | 0.5 | 0 | intron-variant | Trim54 | Mm_Celera | 5:31129758 | CATTTATTTACCTAC[A/G]AGTGTNTGTGAATGC | 58522 |
rs6361170 | snp | A/G | 0.5 | 0 | intron-variant | Trim54 | Mm_Celera | 5:31129764 | TTTACCTACNAGTGT[A/G]TGTGAATGCCACAGA | 58522 |
rs6361689 | snp | C/T | 0.5 | 0 | intron-variant | Trim54 | Mm_Celera | 5:31129842 | actcagagcatccgg[C/T]ttggtggcaagagtc | 58522 |
rs6362195 | snp | C/T | 0.290657 | 0.246672 | intron-variant | Trim54 | Mm_Celera | 5:31129902 | ACAAGTGATTCTTTC[C/T]ACCTCTCTGTAGACC | 58522 |
rs6362784 | snp | A/C | 0.5 | 0 | intron-variant | Trim54 | Mm_Celera | 5:31130050 | ACAATTCAGGAGAGG[A/C]TTTTGATTGGTTGCT | 58522 |
rs6363387 | snp | A/T | 0.5 | 0 | intron-variant | Trim54 | Mm_Celera | 5:31130180 | CAGCCTTTCTTTCTC[A/T]NCttttcttttttag | 58522 |
rs6363388 | snp | C/T | 0.5 | 0 | intron-variant | Trim54 | Mm_Celera | 5:31130181 | AGCCTTTCTTTCTCN[C/T]Cttttcttttttaga | 58522 |
rs6363831 | snp | C/T | 0.5 | 0 | intron-variant | Trim54 | Mm_Celera | 5:31130228 | tgtgctgccctcaaa[C/T]tccctatgtagctga | 58522 |
rs32436595 | snp | A/G | 0.244898 | 0.249948 | intron-variant | Trim54 | Mm_Celera | 5:31129688 | GGGTCATCTCTGGCC[A/G]TCTTTCAACTCTACT | 58522 |
rs32436598 | snp | A/G | 0.32 | 0.24 | intron-variant | Trim54 | Mm_Celera | 5:31129645 | ACCAAGGATCGTGCC[A/G]TCTCAGGCAATCTCT | 58522 |
rs32436601 | snp | A/G | 0.231111 | 0.249285 | intron-variant | Trim54 | Mm_Celera | 5:31129552 | CTAAAACTGTACCAA[A/G]TCTTTGCATCCACAA | 58522 |
rs32437794 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Trim54 | Mm_Celera | 5:31129415 | CTCGTGGTCACTCTC[A/G]ATGTGTGTCTGCTGG | 58522 |
rs32437797 | snp | C/G | 0.124444 | 0.216185 | intron-variant | Trim54 | Mm_Celera | 5:31129290 | TAGGGATATTTAATA[C/G]TCACAAGCCTGGGTT | 58522 |
rs32437800 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Trim54 | Mm_Celera | 5:31129248 | AGAATGTTCCAACAG[C/T]TGGCTTTAAGCGCTT | 58522 |
rs32437803 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Trim54 | Mm_Celera | 5:31128965 | TGTTTTCTATGAGGT[C/T]ACGAGTCTCTAGTCC | 58522 |
rs32437975 | snp | A/G | 0.142012 | 0.225474 | intron-variant | Trim54 | Mm_Celera | 5:31136704 | CAGAATTGGGATTTT[A/G]CCAGGGCTGGCCCAG | 58522 |
rs32437978 | snp | C/T | 0.231111 | 0.249285 | intron-variant | Trim54 | Mm_Celera | 5:31135731 | GAGCACCGGCTAAAA[C/T]TCAATTAACTTTAAA | 58522 |
rs32437981 | snp | C/T | 0.231111 | 0.249285 | intron-variant | Trim54 | Mm_Celera | 5:31134180 | ACAAGGGGAGCAAGA[C/T]GGTCTGTACAGAGAC | 58522 |
rs32438716 | snp | C/G | 0.32 | 0.24 | intron-variant | Trim54 | Mm_Celera | 5:31128733 | TCTGCTCTCCACAAA[C/G]AAAGCTGTCCATCTC | 58522 |
rs32438719 | snp | A/C | 0.231111 | 0.249285 | intron-variant | Trim54 | Mm_Celera | 5:31128569 | TGACCACACCCTTTA[A/C]ACATTCCCTAAACTT | 58522 |
rs32438722 | snp | C/G | 0.231111 | 0.249285 | intron-variant | Trim54 | Mm_Celera | 5:31128525 | ATAAGGCGCGGCTTT[C/G]CACAGCTTCCAACTT | 58522 |
rs32438844 | snp | A/G | 0.277778 | 0.248452 | synonymous-codon | Trim54 | Mm_Celera | 5:31134073 | GAGCGATGGCATCGC[A/G]ATGCTGGTGGCGGGC | 58522 |
rs32438847 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Trim54 | Mm_Celera | 5:31133634 | GGGAAAACCAGTAGA[C/T]GGACCAAGTGATGGA | 58522 |
rs32438850 | snp | A/G | 0.244898 | 0.249948 | intron-variant | Trim54 | Mm_Celera | 5:31133573 | ACCAAAGCAAAGCAA[A/G]CTGAACATAGATCTG | 58522 |
rs32438853 | snp | A/G | 0.244898 | 0.249948 | intron-variant | Trim54 | Mm_Celera | 5:31133439 | CAAAATGACCATGTA[A/G]CAGCAGTGGCCTGTT | 58522 |
rs32439545 | snp | C/T | 0.244898 | 0.249948 | intron-variant | Trim54 | Mm_Celera | 5:31127407 | TCGCTACTGCCTCAC[C/T]CATTTGGGTTCTAAA | 58522 |
rs32439548 | snp | G/T | 0.124444 | 0.216185 | intron-variant | Trim54 | Mm_Celera | 5:31127372 | TAGCTCCCTCCAGGA[G/T]GCACAGGCTTAGAGC | 58522 |
rs32439551 | snp | A/G | 0.32 | 0.24 | intron-variant | Trim54 | Mm_Celera | 5:31127011 | AAATGCCAACAGTGA[A/G]TCCCATGTGTTTGAG | 58522 |
rs32439696 | snp | C/T | 0.32 | 0.24 | intron-variant | Trim54 | Mm_Celera | 5:31132737 | CAAAGAAGTCGTTTA[C/T]ATCACCTGGTTCTTG | 58522 |
rs32439699 | snp | A/G | 0.231111 | 0.249285 | intron-variant | Trim54 | Mm_Celera | 5:31132716 | TGTGTTGAAGTCCCA[A/G]GATATCAAAGAAGTC | 58522 |
rs32439702 | snp | A/G | 0.32 | 0.24 | intron-variant | Trim54 | Mm_Celera | 5:31132630 | GTACAGGCTAGAGAT[A/G]GAGGCCATGCCGCAA | 58522 |
rs32440384 | snp | A/G | 0.32 | 0.24 | intron-variant | Trim54 | Mm_Celera | 5:31126992 | GGCCCTCAAAACTCC[A/G]GTAAAATGCCAACAG | 58522 |
rs32440387 | snp | A/G | 0.32 | 0.24 | intron-variant | Trim54 | Mm_Celera | 5:31126918 | TCAAAGTCTCTTGAG[A/G]ATTAGATCAGGTTCT | 58522 |
rs32440390 | snp | A/G | 0.32 | 0.24 | intron-variant | Trim54 | Mm_Celera | 5:31126885 | TAGTAACCTGCCTGA[A/G]CTTTCTCCACTGTCT | 58522 |
rs32440393 | snp | C/T | 0.32 | 0.24 | intron-variant | Trim54 | Mm_Celera | 5:31126564 | AGCCAGTTGCTGTAA[C/T]GCCCACCTTTAATCT | 58522 |
rs32440425 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Trim54 | Mm_Celera | 5:31132607 | ATCACATGACCAATG[C/T]TGGCTCAGTACAGGC | 58522 |
rs32440428 | snp | A/T | 0.124444 | 0.216185 | intron-variant | Trim54 | Mm_Celera | 5:31132427 | AGATACGCTCAAGAG[A/T]GTGAAATTACACAGC | 58522 |
rs32440431 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Trim54 | Mm_Celera | 5:31132410 | GTATCCACCAAAGGA[C/T]CAGATACGCTCAAGA | 58522 |
rs32440516 | snp | C/T | 0.124444 | 0.216185 | upstream-variant-2KB | Trim54 | Mm_Celera | 5:31116611 | GGAGGAAGGGACAAA[C/T]AGTGCTGCCCAAAGA | 58522 |
rs32440519 | snp | C/T | 0.124444 | 0.216185 | upstream-variant-2KB | Trim54 | Mm_Celera | 5:31116222 | TGGTCTGGCATTCCA[C/T]TTCTGAATCATGCAC | 58522 |
rs32440522 | snp | C/T | 0.244898 | 0.249948 | upstream-variant-2KB | Trim54 | Mm_Celera | 5:31115781 | CCTCCAGGTTGCACC[C/T]ACCACTCCCCAAAGC | 58522 |
rs32440554 | snp | C/T | 0.244898 | 0.249948 | intron-variant | Trim54 | Mm_Celera | 5:31124267 | ACAAAAGCCACAAGG[C/T]CATCAGGTTGGGAGT | 58522 |
rs32440557 | snp | C/T | 0.231111 | 0.249285 | intron-variant | Trim54 | Mm_Celera | 5:31124159 | CCAGGTCTATATATG[C/T]CTTTCCCATTTTAGC | 58522 |
rs32440560 | snp | C/T | 0.231111 | 0.249285 | intron-variant | Trim54 | Mm_Celera | 5:31124133 | TCAGCAGTGGGCCCT[C/T]GTTTCTCAGCCCAGG | 58522 |
rs32440563 | snp | C/G | 0.42 | 0.183303 | intron-variant | Trim54 | Mm_Celera | 5:31123716 | AGAAGAGCTCAGCTG[C/G]CTCTGCCCTTGCTTC | 58522 |
rs32441066 | snp | A/G | 0.336735 | 0.234472 | intron-variant | Trim54 | Mm_Celera | 5:31126301 | AGCACTGAATTTTTT[A/G]AATAAATGAATGGTT | 58522 |
rs32441069 | snp | A/C | 0.336735 | 0.234472 | intron-variant | Trim54 | Mm_Celera | 5:31126199 | CTCTCTATGGGGATC[A/C]CAAACCTTACTTTGT | 58522 |
rs32441072 | snp | A/G | 0.32 | 0.24 | intron-variant | Trim54 | Mm_Celera | 5:31126145 | AAAAGCACGTGCCAA[A/G]TGGCTCCTTCAGTAT | 58522 |
rs32441254 | snp | C/T | 0.124444 | 0.216185 | synonymous-codon | Trim54 | Mm_Celera | 5:31132039 | TGAGGAGCACGAGGA[C/T]GAGAAGATCAACATC | 58522 |
rs32441257 | snp | G/T | 0.124444 | 0.216185 | synonymous-codon | Trim54 | Mm_Celera | 5:31131994 | GATCCTCAGGCCACT[G/T]CACGCCAAGGCTGAA | 58522 |
rs32441260 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Trim54 | Mm_Celera | 5:31131952 | GTCACAGTCTGGCTC[C/T]CTGACAGTCGCTGCT | 58522 |
rs32441263 | snp | G/T | 0.124444 | 0.216185 | intron-variant | Trim54 | Mm_Celera | 5:31131926 | AACGCTGTGTAAGTT[G/T]CCGACCACTGGTCAC | 58522 |
rs32441326 | snp | C/T | 0.231111 | 0.249285 | intron-variant | Trim54 | Mm_Celera | 5:31123358 | CCAGCTAGGGAGAGT[C/T]TTACATACATAGGGA | 58522 |
rs32441329 | snp | C/T | 0.244898 | 0.249948 | intron-variant | Trim54 | Mm_Celera | 5:31122564 | CTGTTGGCCAGGAGA[C/T]TGACTGCCATGTTCA | 58522 |
rs32441332 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Trim54 | Mm_Celera | 5:31122478 | ATAGAGCAGCACAGC[A/G]CCCTTTGTTATGACC | 58522 |
rs32441895 | snp | A/T | 0.244898 | 0.249948 | intron-variant | Trim54 | Mm_Celera | 5:31126130 | CTGTCTATCCTGACT[A/T]AAAGCACGTGCCAAA | 58522 |
rs32441898 | snp | A/G | 0.231111 | 0.249285 | intron-variant | Trim54 | Mm_Celera | 5:31125894 | CAAGAAGCAATTTGT[A/G]GTTTCACTTCTTGTC | 58522 |
rs32441901 | snp | G/T | 0.231111 | 0.249285 | intron-variant | Trim54 | Mm_Celera | 5:31125807 | GTAATTTCCTTTTTT[G/T]ACCTATGAACCACCT | 58522 |
rs32442136 | snp | A/G | 0.132653 | 0.220748 | intron-variant | Trim54 | Mm_Celera | 5:31131914 | CCCCAAAGTGAGAAC[A/G]CTGTGTAAGTTTCCG | 58522 |
rs32442139 | snp | C/T | 0.33241 | 0.236027 | intron-variant | Trim54 | Mm_Celera | 5:31131913 | TCCCCAAAGTGAGAA[C/T]GCTGTGTAAGTTTCC | 58522 |
rs32442142 | snp | C/T | 0.132653 | 0.220748 | intron-variant | Trim54 | Mm_Celera | 5:31131877 | CTTCCTGGGTCCAGG[C/T]CTCCTTTGAGCATCG | 58522 |
rs32442205 | snp | A/T | 0.124444 | 0.216185 | intron-variant | Trim54 | Mm_Celera | 5:31122460 | GGCTGTGTTTTCTGT[A/T]TGATAGAGCAGCACA | 58522 |
rs32442208 | snp | A/G | 0.231111 | 0.249285 | intron-variant | Trim54 | Mm_Celera | 5:31121995 | CTTTTGTCTTGGTTT[A/G]TTATACGGTTGTTTT | 58522 |
rs32442211 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Trim54 | Mm_Celera | 5:31121948 | ATTTTTTTTAAATTG[C/T]TCCATATCTATACAT | 58522 |
rs32442804 | snp | A/C | 0.124444 | 0.216185 | intron-variant | Trim54 | Mm_Celera | 5:31125638 | AATGGAGGAGCAGAT[A/C]TTGATAACTGAATAT | 58522 |
rs32442807 | snp | C/T | 0.231111 | 0.249285 | intron-variant | Trim54 | Mm_Celera | 5:31125169 | CTGTTGTGGCATATA[C/T]GACAGAGCCAATTTC | 58522 |
rs32442810 | snp | A/G | 0.336735 | 0.234472 | intron-variant | Trim54 | Mm_Celera | 5:31125063 | TCATCCAGATGTTCC[A/G]TTTCTTAGGGTAATG | 58522 |
rs32442813 | snp | C/T | 0.32 | 0.24 | intron-variant | Trim54 | Mm_Celera | 5:31124903 | ACGATGGATTTAAGA[C/T]TGTGAGCGTTTCCTT | 58522 |
rs32442944 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Trim54 | Mm_Celera | 5:31121688 | AGATACACTTACACT[C/T]AACCAATAGATTCTG | 58522 |
rs32442947 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Trim54 | Mm_Celera | 5:31121631 | CATACTTCTGAGAAT[C/T]TTTCTAGAAAGCTCC | 58522 |
rs32442950 | snp | A/G | 0.244898 | 0.249948 | intron-variant | Trim54 | Mm_Celera | 5:31121588 | TCTTTAATTCCCTTT[A/G]CTAAATACAAACAAC | 58522 |
rs32442953 | snp | A/T | 0.124444 | 0.216185 | intron-variant | Trim54 | Mm_Celera | 5:31121517 | TTATGTGTACATTTT[A/T]GTCAAGCACCTTGGA | 58522 |
rs32442985 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Trim54 | Mm_Celera | 5:31131816 | GACCTCATCAGCTCC[C/T]ATGACTTCCTGTCCT | 58522 |
rs32442988 | snp | C/T | 0.124444 | 0.216185 | synonymous-codon | Trim54 | Mm_Celera | 5:31131122 | CCCATCTTGTAGGCA[C/T]GAGGTTGTCCTGGAC | 58522 |
rs32442991 | snp | C/T | 0.32 | 0.24 | intron-variant | Trim54 | Mm_Celera | 5:31131007 | TTCCCTCACACCTCC[C/T]TACACTTCTAGTGTC | 58522 |
rs32443546 | snp | C/T | 0.32 | 0.24 | intron-variant | Trim54 | Mm_Celera | 5:31124773 | TGAGGTTGGATCAGG[C/T]CAAGCACCAGTCTAC | 58522 |
rs32443549 | snp | A/G | 0.32 | 0.24 | intron-variant | Trim54 | Mm_Celera | 5:31124751 | TTCCTCTTGTTTTCC[A/G]TGGTGCTGAGGTTGG | 58522 |
rs32443552 | snp | C/T | 0.231111 | 0.249285 | intron-variant | Trim54 | Mm_Celera | 5:31124499 | CACCAAAGCCTTGAA[C/T]GAAGCCTAGAATTCC | 58522 |
rs32443754 | snp | C/T | 0.32 | 0.24 | intron-variant | Trim54 | Mm_Celera | 5:31130971 | AAGACCTAATGTTCC[C/T]GTGTCAGCTCACCAC | 58522 |
rs32443757 | snp | C/T | 0.32 | 0.24 | intron-variant | Trim54 | Mm_Celera | 5:31130793 | CTTGCCTACAGTTAG[C/T]ATTCCTGTCAAAGCC | 58522 |
rs32443760 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Trim54 | Mm_Celera | 5:31130776 | GGCTATACTGCCAGT[C/T]TCTTGCCTACAGTTA | 58522 |
rs32443763 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Trim54 | Mm_Celera | 5:31130058 | GGAGAGGATTTTGAT[C/T]GGTTGCTTCAGGTCA | 58522 |
rs32443806 | snp | C/G | 0.124444 | 0.216185 | intron-variant | Trim54 | Mm_Celera | 5:31121489 | ACGATGCCAGGACAC[C/G]GCATTTAAATTTTTA | 58522 |
rs32443809 | snp | C/T | 0.244898 | 0.249948 | intron-variant | Trim54 | Mm_Celera | 5:31121469 | GAAAGTTAACAGTTA[C/T]GAACACGATGCCAGG | 58522 |
rs32443812 | snp | A/G | 0.231111 | 0.249285 | intron-variant, upstream-variant-2KB | Trim54, LOC105244715 | Mm_Celera | 5:31121290 | TGTTCCTCACAGCTC[A/G]GTCTGAGAGATGAGC | 58522 |
rs32444465 | snp | A/C | 0.32 | 0.24 | intron-variant | Trim54 | Mm_Celera | 5:31124448 | CCAGAAGGCATCACG[A/C]AGCCCTCGAGAGAAA | 58522 |
rs32444468 | snp | C/G | 0.32 | 0.24 | intron-variant | Trim54 | Mm_Celera | 5:31124319 | TGGCATCCAAGGCCT[C/G]TTTCATATTAGCGTT | 58522 |
rs32444471 | snp | A/G | 0.244898 | 0.249948 | intron-variant | Trim54 | Mm_Celera | 5:31124301 | GGTCTCCAACATTGT[A/G]CCTGGCATCCAAGGC | 58522 |
rs32444576 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Trim54 | Mm_Celera | 5:31130005 | ATGAGCCTTTTTTCT[A/G]TAGCCAGCTTGACTT | 58522 |
rs32444581 | snp | A/G | 0.32 | 0.24 | intron-variant | Trim54 | Mm_Celera | 5:31129701 | CCATCTTTCAACTCT[A/G]CTTCTCGCCAAAAAT | 58522 |
rs32444585 | snp | A/C | 0.231111 | 0.249285 | intron-variant, upstream-variant-2KB | Trim54, LOC105244715 | Mm_Celera | 5:31121178 | GATGGTCCTGTAGAT[A/C]TGGAGCGTCCTCAGA | 58522 |
rs32444588 | snp | A/G | 0.244898 | 0.249948 | intron-variant, upstream-variant-2KB | Trim54, LOC105244715 | Mm_Celera | 5:31120577 | TATGCCTTGCCTACA[A/G]TCAAGGTTTTTCTTT | 58522 |
rs32444591 | snp | C/T | 0.142012 | 0.225474 | intron-variant, upstream-variant-2KB | Trim54, LOC105244715 | Mm_Celera | 5:31120351 | GAGCATCTAAACATG[C/T]TGTTATTTGGCTATG | 58522 |
rs32445484 | snp | A/G | 0.132653 | 0.220748 | intron-variant, upstream-variant-2KB | Trim54, LOC105244715 | Mm_Celera | 5:31119689 | TTAAAAAAATAAAAG[A/G]ATAAGAATTCTCCCT | 58522 |
rs32445487 | snp | C/T | 0.132653 | 0.220748 | intron-variant, nc-transcript-variant | Trim54, LOC105244715 | Mm_Celera | 5:31119264 | TCACATGCACAGACA[C/T]GGGACCTCGCAGATA | 58522 |
rs32445490 | snp | C/G | 0.231111 | 0.249285 | intron-variant, nc-transcript-variant | Trim54, LOC105244715 | Mm_Celera | 5:31119235 | AGAGGTCGGGGAGAA[C/G]GAAGGAATAGAACTC | 58522 |
rs32445493 | snp | A/G | 0.124444 | 0.216185 | intron-variant, nc-transcript-variant | Trim54, LOC105244715 | Mm_Celera | 5:31118708 | GTAAAGACTTAGAGG[A/G]TAGCTGATATTCAGG | 58522 |
rs32446346 | snp | A/C/T | 0.231111 | 0.249285 | intron-variant, downstream-variant-500B | Trim54, LOC105244715 | GRCm38.p3 | 5:31117984 | TCATGCGTTTTGCAA[A/C/T]GATGGCGGCGGTCTC | 58522 |
rs32446349 | snp | C/T | 0.231111 | 0.249285 | intron-variant, downstream-variant-500B | Trim54, LOC105244715 | Mm_Celera | 5:31117922 | GGGTCTCTTTCCGGC[C/T]TGCGTGCTGAGAGGG | 58522 |
rs32446352 | snp | G/T | 0.231111 | 0.249285 | intron-variant | Trim54 | Mm_Celera | 5:31117909 | CTTTCTTTGTTCTGG[G/T]TCTCTTTCCGGCTTG | 58522 |