SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs3654242 | snp | A/T | 0.260355 | 0.249785 | intron-variant | Trim38 | Mm_Celera | 13:23786804 | GAAACATTATCTGAA[A/T]AACAACAGTAAGATA | 214158 |
rs3654310 | snp | A/T | 0.492188 | 0.0620098 | intron-variant | Trim38 | Mm_Celera | 13:23786833 | TAATGGATAATCTGG[A/T]GTAAACCACTCCTGT | 214158 |
rs3654391 | snp | G/T | 0.408163 | 0.193609 | intron-variant | Trim38 | Mm_Celera | 13:23786881 | ATGAATGTACAGTCC[G/T]AGAATAACCGTGTAC | 214158 |
rs3655611 | snp | G/T | 0.484429 | 0.0868505 | intron-variant | Trim38 | Mm_Celera | 13:23787042 | GTTTGTCTGAATCCA[G/T]CTCTTAGCCTCACCA | 214158 |
rs3655667 | snp | C/T | 0.497041 | 0.0383476 | intron-variant | Trim38 | Mm_Celera | 13:23787072 | AGGTGAGAAACCAAC[C/T]TTGGAGAAAGTTTAT | 214158 |
rs3655687 | snp | A/G | 0.277778 | 0.248452 | intron-variant | Trim38 | Mm_Celera | 13:23787080 | AACCAACCTTGGAGA[A/G]AGTTTATCAAGCACG | 214158 |
rs3691376 | snp | C/G | 0.32 | 0.24 | intron-variant | Trim38 | Mm_Celera | 13:23785470 | GCCCAGGATTGCTAA[C/G]GCAATTAGTAACTCA | 214158 |
rs3691969 | snp | C/T | 0.5 | 0 | intron-variant | Trim38 | Mm_Celera | 13:23785540 | TGAAGAGCTCAATAG[C/T]TATTCATTGTGATTT | 214158 |
rs3712486 | snp | C/T | 0.471655 | 0.115624 | intron-variant | Trim38 | Mm_Celera | 13:23786666 | GTGGGAGAATGGAGC[C/T]TAGAAATGAGGTGGA | 214158 |
rs3719353 | snp | A/G | 0.5 | 0 | intron-variant | Trim38 | Mm_Celera | 13:23790580 | ACAAAGAGGGGAAGG[A/G]CTCCTTTATGCTCCA | 214158 |
rs4136888 | snp | G/T | 0.21875 | 0.248039 | intron-variant | Trim38 | Mm_Celera | 13:23786900 | ATAACCGTGTACTTT[G/T]CAGGGCTGAGTTCAC | 214158 |
rs29243122 | snp | A/C | 0.444444 | 0.157135 | utr-variant-5-prime, upstream-variant-2KB | Trim38 | Mm_Celera | 13:23778619 | CTCAGCAGAGCACAA[A/C]TGGATCCACAATTGT | 214158 |
rs29246280 | snp | A/T | 0.487535 | 0.077957 | upstream-variant-2KB | Trim38 | Mm_Celera | 13:23777771 | AGTGGTGAAGAGTCT[A/T]CTATTTGAGGTGGGA | 214158 |
rs29251254 | snp | A/T | 0.375 | 0.216506 | utr-variant-5-prime, intron-variant | Trim38 | Mm_Celera | 13:23779257 | CCGCAATCCACAGGG[A/T]GGGACCTCCGTGGAA | 214158 |
rs29493214 | snp | A/C | 0.375 | 0.216506 | intron-variant | Trim38 | Mm_Celera | 13:23780518 | CAAAAGACAAATGAG[A/C]TTTGTGTCTTCATCC | 214158 |
rs29510134 | snp | G/T | 0.375 | 0.216506 | upstream-variant-2KB | Trim38 | Mm_Celera | 13:23778059 | TTTTATATAAAGGAG[G/T]GATTCATTTCCCTCC | 214158 |
rs29547017 | snp | C/T | 0.48 | 0.0979796 | intron-variant | Trim38 | Mm_Celera | 13:23780377 | ACCACCTGAAAGTTC[C/T]AAATAGTCATGAAGT | 214158 |
rs29564283 | snp | C/T | 0.375 | 0.216506 | upstream-variant-2KB, intron-variant | Trim38 | Mm_Celera | 13:23780827 | TGGCAGGCAGGTATG[C/T]TGTGTATATTAATCT | 214158 |
rs29570211 | snp | C/T | 0.277778 | 0.248452 | intron-variant | Trim38 | Mm_Celera | 13:23786324 | TTACATACTAGGATG[C/T]ATGAAAACTTCCATC | 214158 |
rs29571127 | snp | A/G | 0.375 | 0.216506 | upstream-variant-2KB | Trim38 | Mm_Celera | 13:23777829 | GTAGCCTGAGTTGAG[A/G]CAGTGGTTGGGATGA | 214158 |
rs29727982 | snp | A/G | 0.444444 | 0.157135 | utr-variant-5-prime, upstream-variant-2KB | Trim38 | Mm_Celera | 13:23778629 | CACAAATGGATCCAC[A/G]ATTGTCTCCAGAGGT | 214158 |
rs29757696 | snp | A/C | 0.297521 | 0.245442 | upstream-variant-2KB, intron-variant | Trim38 | Mm_Celera | 13:23780838 | TATGTTGTGTATATT[A/C]ATCTAGGTTGTCTGG | 214158 |
rs29760759 | snp | A/G | 0.207612 | 0.24638 | intron-variant | Trim38 | Mm_Celera | 13:23786038 | GCATAGAGGAAGACC[A/G]GGACAAATACAGGGA | 214158 |
rs29777906 | snp | C/T | 0.375 | 0.216506 | upstream-variant-2KB | Trim38 | Mm_Celera | 13:23777609 | CAAACTTCCGTCTCT[C/T]CCATTGAGATGAACT | 214158 |
rs29796634 | snp | C/G | 0.48 | 0.0979796 | upstream-variant-2KB, intron-variant | Trim38 | Mm_Celera | 13:23781884 | CTTGCATCTATATGA[C/G]TATGTCTTTCCTTAG | 214158 |
rs29796637 | snp | A/G | 0.124444 | 0.216185 | upstream-variant-2KB, intron-variant | Trim38 | Mm_Celera | 13:23781946 | AAGATACATCTGATC[A/G]ATGCCATCTTTTGTG | 214158 |
rs29796640 | snp | C/T | 0.459184 | 0.136902 | upstream-variant-2KB, intron-variant | Trim38 | Mm_Celera | 13:23782107 | GTCATGGTATTCTAT[C/T]TTCTACTTGATTCAT | 214158 |
rs29796643 | snp | C/T | 0.48 | 0.0979796 | upstream-variant-2KB, intron-variant | Trim38 | Mm_Celera | 13:23782217 | CTTGGCCCAAGAGAA[C/T]ACTGGACAAAAATGG | 214158 |
rs29797145 | snp | A/G | 0.124444 | 0.216185 | upstream-variant-2KB | Trim38 | Mm_Celera | 13:23778373 | TGGAGTCTCAAGAGC[A/G]TTGGACGTAAAAGCA | 214158 |
rs29797148 | snp | C/T | 0.493827 | 0.0552116 | utr-variant-5-prime, upstream-variant-2KB | Trim38 | Mm_Celera | 13:23778516 | TTCAAAAGACCAGAG[C/T]GACTTCATTGGCTAT | 214158 |
rs29797151 | snp | C/T | 0.489796 | 0.070696 | utr-variant-5-prime, upstream-variant-2KB | Trim38 | Mm_Celera | 13:23778579 | GACTCAGCAGAGTCT[C/T]CTAGGTTTCCGGAAG | 214158 |
rs29797586 | snp | C/T | 0.48 | 0.0979796 | upstream-variant-2KB, intron-variant | Trim38 | Mm_Celera | 13:23782364 | GAATGTAAGTGGCTA[C/T]ATGGGATAGTGGCTA | 214158 |
rs29797589 | snp | C/T | 0.48 | 0.0979796 | upstream-variant-2KB, intron-variant | Trim38 | Mm_Celera | 13:23782406 | CAATAGATATTTATG[C/T]ATCTTCTCAATTCTA | 214158 |
rs29797592 | snp | A/G | 0.124444 | 0.216185 | upstream-variant-2KB, utr-variant-5-prime | Trim38 | Mm_Celera | 13:23782469 | CTAAACCCAGTAGCC[A/G]TCAGTTGATTGTATT | 214158 |
rs29797874 | snp | A/G | 0.35503 | 0.226867 | intron-variant, upstream-variant-2KB | Trim38 | Mm_Celera | 13:23778729 | TATATAGGCACCCAC[A/G]CTAGCTCCGGCTACG | 214158 |
rs29797877 | snp | C/T | 0.408163 | 0.193609 | intron-variant, upstream-variant-2KB | Trim38 | Mm_Celera | 13:23778743 | CACTAGCTCCGGCTA[C/T]GTACTAGTCACGCGG | 214158 |
rs29797880 | snp | C/T | 0.426035 | 0.177515 | intron-variant, upstream-variant-2KB | Trim38 | Mm_Celera | 13:23778754 | GCTACGTACTAGTCA[C/T]GCGGTTTCCCGCCAC | 214158 |
rs29797883 | snp | A/G | 0.5 | 0 | intron-variant, upstream-variant-2KB | Trim38 | Mm_Celera | 13:23778814 | AGCGGCGGCCGCCCA[A/G]CTCGTTCTCTTGCTG | 214158 |
rs29798555 | snp | A/G | 0.48 | 0.0979796 | upstream-variant-2KB, utr-variant-5-prime | Trim38 | Mm_Celera | 13:23782512 | AGGTGTACATCTACC[A/G]CTGTGGGAAACATTT | 214158 |
rs29798558 | snp | C/T | 0.487535 | 0.077957 | missense | Trim38 | Mm_Celera | 13:23782591 | GCTCAGACTTTAGCA[C/T]GGTGAAGATAAGAAA | 214158 |
rs29798561 | snp | A/G | 0.48 | 0.0979796 | synonymous-codon | Trim38 | Mm_Celera | 13:23782838 | GGGGATGGAAGAGCA[A/G]GATCAAGACATGGTG | 214158 |
rs29798656 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Trim38 | Mm_Celera | 13:23784404 | CTTGTTATCCCTATC[A/G]GTACACAGACATGAT | 214158 |
rs29798659 | snp | C/T | 0.497041 | 0.0383476 | intron-variant | Trim38 | GRCm38.p3 | 13:23784461 | TGGGAGCTGTGTTTG[C/T]TTTATGGATATTATA | 214158 |
rs29798662 | snp | A/T | 0.132653 | 0.220748 | intron-variant | Trim38 | Mm_Celera | 13:23784508 | ACAGCATGTGACACA[A/T]AGCAATGGCAATATG | 214158 |
rs29798826 | snp | C/G | 0.48 | 0.0979796 | intron-variant, upstream-variant-2KB | Trim38 | Mm_Celera | 13:23778841 | GCTGCGGATCCTGTT[C/G]TCATTCCCAGTACTC | 214158 |
rs29798829 | snp | A/G | 0.459184 | 0.136902 | intron-variant, upstream-variant-2KB | Trim38 | Mm_Celera | 13:23778872 | TGCCCCCTGTGATTA[A/G]CTGTCACAAATCCTC | 214158 |
rs29798832 | snp | A/G | 0.165289 | 0.235211 | intron-variant, upstream-variant-2KB | Trim38 | Mm_Celera | 13:23778920 | AAACTCTAGCAGCTT[A/G]TAATTTATCACTCAG | 214158 |
rs29799384 | snp | A/G | 0.444444 | 0.157135 | intron-variant | Trim38 | Mm_Celera | 13:23788704 | CCTGCTATCATGCTC[A/G]CATTAGCTCATTCGC | 214158 |
rs29799387 | snp | G/T | 0.444444 | 0.157135 | intron-variant | Trim38 | Mm_Celera | 13:23788737 | AGGTATCTGTCAGAC[G/T]TATTCAAATATGCTT | 214158 |
rs29799390 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Trim38 | Mm_Celera | 13:23788762 | ATGCTTTCAAGTGAC[A/G]GATGGTGACAGCATA | 214158 |
rs29799393 | snp | A/G | 0.277778 | 0.248452 | intron-variant | Trim38 | Mm_Celera | 13:23788860 | AGCTGCGTGTCTGAT[A/G]TATCCATCCCATCAG | 214158 |
rs29799404 | snp | C/T | 0.124444 | 0.216185 | synonymous-codon | Trim38 | Mm_Celera | 13:23782898 | CTTTTGTGAAGATGA[C/T]GGTCAACTCCTCTGC | 214158 |
rs29799407 | snp | A/G | 0.48 | 0.0979796 | intron-variant | Trim38 | Mm_Celera | 13:23783020 | GGAGCCTCTACAAGT[A/G]TCCAATCTAATGAGC | 214158 |
rs29799410 | snp | A/G | 0.48 | 0.0979796 | intron-variant | Trim38 | Mm_Celera | 13:23783231 | GAATAAGGCTGAGAA[A/G]CAGAACAGGAAAACC | 214158 |
rs29799413 | snp | C/T | 0.497041 | 0.0383476 | intron-variant | Trim38 | Mm_Celera | 13:23783280 | CTGTGTGTGCACAGG[C/T]ATTGGCTCTCCCATA | 214158 |
rs29799545 | snp | A/G | 0.48 | 0.0979796 | intron-variant | Trim38 | Mm_Celera | 13:23784518 | ACACATAGCAATGGC[A/G]ATATGTTGTTTTTCT | 214158 |
rs29799548 | snp | A/C | 0.5 | 0 | intron-variant | Trim38 | Mm_Celera | 13:23784534 | ATATGTTGTTTTTCT[A/C]AATCAGTCACAGGAT | 214158 |
rs29799551 | snp | A/T | 0.375 | 0.216506 | intron-variant | Trim38 | Mm_Celera | 13:23784548 | TCAATCAGTCACAGG[A/T]TCTTTTGGAGGATCT | 214158 |
rs29799553 | snp | A/T | 0.231111 | 0.249285 | intron-variant | Trim38 | Mm_Celera | 13:23784631 | ATTTTTTAACCTTTT[A/T]TCATTACAAGCAATT | 214158 |
rs29799735 | snp | C/T | 0.426035 | 0.177515 | intron-variant, upstream-variant-2KB | Trim38 | Mm_Celera | 13:23778931 | GCTTGTAATTTATCA[C/T]TCAGATTTAATAAGC | 214158 |
rs29799738 | snp | A/T | 0.459184 | 0.136902 | intron-variant, upstream-variant-2KB | Trim38 | Mm_Celera | 13:23778987 | AAGAACTTAACACTC[A/T]ATTGATATAAATACA | 214158 |
rs29799741 | snp | C/T | 0.48 | 0.0979796 | intron-variant, utr-variant-5-prime | Trim38 | Mm_Celera | 13:23779103 | ACTGTGTGGTTCTGG[C/T]TCCACTTCCTCTCCT | 214158 |
rs29800246 | snp | A/T | 0.48 | 0.0979796 | intron-variant | Trim38 | Mm_Celera | 13:23783448 | TGTAGGAGAGAGTCC[A/T]CATGCAAAGTCATGC | 214158 |
rs29800249 | snp | A/G | 0.5 | 0 | intron-variant | Trim38 | Mm_Celera | 13:23783465 | ATGCAAAGTCATGCC[A/G]TAGGAACTTCCTCAT | 214158 |
rs29800252 | snp | A/G | 0.497778 | 0.0332592 | intron-variant | Trim38 | Mm_Celera | 13:23783554 | CTTCTCATCACTTCC[A/G]ATTCTTAATCCTAGA | 214158 |
rs29800426 | snp | C/T | 0.48 | 0.0979796 | intron-variant | Trim38 | Mm_Celera | 13:23788944 | TTAAGGTTGAGAATG[C/T]GGCTTATATGCTGCA | 214158 |
rs29800429 | snp | A/G | 0.132653 | 0.220748 | intron-variant | Trim38 | Mm_Celera | 13:23788946 | AAGGTTGAGAATGCG[A/G]CTTATATGCTGCACT | 214158 |
rs29800432 | snp | A/G | 0.375 | 0.216506 | intron-variant | Trim38 | Mm_Celera | 13:23789020 | GATTTACCACTAGGG[A/G]TTTGTGTTACAAGTT | 214158 |
rs29800455 | snp | A/C | 0.46281 | 0.131194 | intron-variant | Trim38 | Mm_Celera | 13:23786559 | CATCTTTAATACTGC[A/C]TGCTACTTATTTATT | 214158 |
rs29800460 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Trim38 | Mm_Celera | 13:23786712 | CAGACAGTTTATATT[C/T]TGAGGGTTAACCATG | 214158 |
rs29800626 | snp | A/G | 0.497778 | 0.0332592 | intron-variant | Trim38 | Mm_Celera | 13:23784741 | TAGTTTGACAAGGAC[A/G]CGAATTCCTTTAAGT | 214158 |
rs29800629 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Trim38 | Mm_Celera | 13:23784748 | ACAAGGACACGAATT[C/T]CTTTAAGTTGGTTTC | 214158 |
rs29800632 | snp | A/G | 0.444444 | 0.157135 | intron-variant | Trim38 | Mm_Celera | 13:23784803 | TTCTTTCCAAGCTCT[A/G]ATAACTTCAATTAGT | 214158 |
rs29800724 | snp | C/T | 0.48 | 0.0979796 | utr-variant-5-prime | Trim38 | Mm_Celera | 13:23779399 | AGATAATCCAGAATA[C/T]AGGTGAGTGAAGCTT | 214158 |
rs29800727 | snp | C/G | 0.426035 | 0.177515 | intron-variant | Trim38 | Mm_Celera | 13:23779525 | TCAGTATCCTCCCTT[C/G]AGAAGAAATTCTTTG | 214158 |
rs29800730 | snp | G/T | 0.48 | 0.0979796 | intron-variant | Trim38 | Mm_Celera | 13:23779575 | AGAGGAAGGCAACCT[G/T]TTTGGCAAATTCAGT | 214158 |
rs29800733 | snp | C/T | 0.48 | 0.0979796 | intron-variant | Trim38 | GRCm38.p3 | 13:23779732 | GTGTCTCAGAAGCAG[C/T]TGTCATCATTGCCAT | 214158 |
rs29800884 | snp | C/T | 0.21875 | 0.248039 | upstream-variant-2KB | Trim38 | Mm_Celera | 13:23776846 | TTTATCAAGGCTATA[C/T]GGGGCTGACCCTTCC | 214158 |
rs29800887 | snp | C/G | 0.497778 | 0.0332592 | upstream-variant-2KB | Trim38 | Mm_Celera | 13:23776933 | CCTTCTCCATTCCTA[C/G]TGTCTGTACTACTGC | 214158 |
rs29800890 | snp | C/G | 0.489796 | 0.070696 | upstream-variant-2KB | Trim38 | Mm_Celera | 13:23777018 | CTATTGGAGACGCTC[C/G]CATTGGTATTTGTCT | 214158 |
rs29800893 | snp | C/T | 0.132653 | 0.220748 | upstream-variant-2KB | Trim38 | Mm_Celera | 13:23777047 | CTAAGTTAAAGTTAC[C/T]ATTGCTATGATGAAG | 214158 |
rs29801075 | snp | A/G | 0.497778 | 0.0332592 | intron-variant | Trim38 | Mm_Celera | 13:23783610 | TAGAAAGTTTATTTG[A/G]AAAGTAAAGGGCCAG | 214158 |
rs29801078 | snp | A/G | 0.231111 | 0.249285 | intron-variant | Trim38 | Mm_Celera | 13:23783643 | GCACTGAGAAGATCT[A/G]GTACTGTAAAATAAA | 214158 |
rs29801081 | snp | C/T | 0.231111 | 0.249285 | intron-variant | Trim38 | Mm_Celera | 13:23783697 | GTGTGAGAGGGCAGA[C/T]TCAAACAAGATTCCA | 214158 |
rs29801405 | snp | A/G | 0.277778 | 0.248452 | intron-variant | Trim38 | Mm_Celera | 13:23789036 | TTTGTGTTACAAGTT[A/G]TCTCTACCAAGGATT | 214158 |
rs29801408 | snp | A/C | 0.473373 | 0.11227 | intron-variant | Trim38 | Mm_Celera | 13:23789043 | TACAAGTTATCTCTA[A/C]CAAGGATTCTCTGTA | 214158 |
rs29801411 | snp | C/T | 0.408163 | 0.193609 | intron-variant | Trim38 | Mm_Celera | 13:23789086 | TCACTGGAAGCAGTT[C/T]TTGGTTTTTATCTTA | 214158 |
rs29801515 | snp | C/T | 0.495868 | 0.0452663 | intron-variant | Trim38 | Mm_Celera | 13:23784894 | GTCCAGGAAATGGCA[C/T]TATCAGGAAGTGTGG | 214158 |
rs29801518 | snp | A/G | 0.408163 | 0.193609 | intron-variant | Trim38 | Mm_Celera | 13:23784978 | GGCTTTAAGACCCTC[A/G]ATCTAGCTGCCTGGA | 214158 |
rs29801521 | snp | A/T | 0.32 | 0.24 | intron-variant | Trim38 | Mm_Celera | 13:23784979 | GCTTTAAGACCCTCG[A/T]TCTAGCTGCCTGGAA | 214158 |
rs29801597 | snp | A/G | 0.408163 | 0.193609 | intron-variant | Trim38 | Mm_Celera | 13:23786872 | AGGAGGGGCATGAAT[A/G]TACAGTCCGAGAATA | 214158 |
rs29801602 | snp | A/C | 0.473373 | 0.11227 | intron-variant | Trim38 | Mm_Celera | 13:23786887 | GTACAGTCCGAGAAT[A/C]ACCGTGTACTTTTCA | 214158 |
rs29801726 | snp | C/T | 0.489796 | 0.070696 | intron-variant | Trim38 | Mm_Celera | 13:23779781 | TTTGGTTGTCAGTGT[C/T]CTCCTGGGACATATC | 214158 |
rs29801729 | snp | A/G | 0.48 | 0.0979796 | intron-variant | Trim38 | Mm_Celera | 13:23779815 | ATTACAGTTCTCATT[A/G]AAGTCTGGCCTCCTT | 214158 |
rs29801732 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Trim38 | Mm_Celera | 13:23779847 | CCACTTTCTCTATAG[C/T]CTAGGCTCTGACATG | 214158 |
rs29801786 | snp | A/G | 0.46281 | 0.131194 | upstream-variant-2KB | Trim38 | Mm_Celera | 13:23777059 | TACCATTGCTATGAT[A/G]AAGCACCATGATCAA | 214158 |
rs29801789 | snp | C/T | 0.396694 | 0.202437 | upstream-variant-2KB | Trim38 | Mm_Celera | 13:23777134 | TACATCGTAGTTCAT[C/T]GAAGGACATCAGGAC | 214158 |
rs29801792 | snp | C/T | 0.489796 | 0.070696 | upstream-variant-2KB | Trim38 | Mm_Celera | 13:23777195 | AGCTGATACAGAAGC[C/T]AAGAAGGCTAGCTGC | 214158 |
rs29802034 | snp | A/G | 0.497778 | 0.0332592 | intron-variant | Trim38 | Mm_Celera | 13:23783746 | AAGCAAATGCTCATG[A/G]TGAGTTGTGCAGTGG | 214158 |
rs29802037 | snp | A/G | 0.165289 | 0.235211 | intron-variant | Trim38 | Mm_Celera | 13:23783772 | AGTGGGAGATTTGCC[A/G]TGATTCATAGGCTCT | 214158 |