DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Cdc26 ATTTA 281-538 604-608;783-787 Cdc26 WWATTTAWW 281-538 781-789 Cdc26 WWWATTTAWWW 281-538 780-790 Cdc26 WWWWATTTAWWWW 281-538 779-791

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004523 mmu-miR-29b* 66440 Cdc26 auuuggugguauacuUUGGUCg |||||| gaugacaggaguaccAACCAGa 2 8 45 66 [mm9:4:62055813-62055834:-] 0.6149 120 6 -13.93 -0.1690 MIMAT0004526 mmu-miR-101a* 66440 Cdc26 cguagucgugacacuAUUGACu |||||| ggaccgcagaaggcuUAACUGa 2 8 204 225 [mm9:4:62055654-62055675:-] 0.6134 120 6 -13.12 -0.1088 MIMAT0004575 mmu-miR-295* 66440 Cdc26 cuUCACACGG--GGUGUAAA-CUCa :| || || ||| |||| ||| caGGAGUACCAACCAGAUUUAGAGa 2 21 50 74 [mm9:4:62055805-62055829:-] 0.6149 123 0 -16.19 -1.1755 MIMAT0000586 mmu-miR-340-3p 66440 Cdc26 cgAUAUUUCAUUGACUCUGCcu |: ||| | ||||||| uuUGGAAAAAAUGUGAGACGuc 3 21 252 273 [mm9:4:62055606-62055627:-] 0.6134 136 0 -11.09 -0.1169 MIMAT0004670 mmu-miR-7a* 66440 Cdc26 auaccgucUGACACUAAACAAc |||| |||||| aaggcuuaACUGAUUUUUGUUu 2 15 213 234 [mm9:4:62055645-62055666:-] 0.6134 122 6 -13.29 -0.2271 MIMAT0000744 mmu-miR-380-5p 66440 Cdc26 gcguacaagauaccaGUUGGUa |||||| ugaugacaggaguacCAACCAg 2 8 44 65 [mm9:4:62055814-62055835:-] 0.6149 120 6 -8.33 -0.1539 MIMAT0003173 mmu-miR-547 66440 Cdc26 gagugAGUUUCUACAUGGUUc | | ||: ||||||| aaugaUGACAGGAGUACCAAc 2 17 42 62 [mm9:4:62055817-62055837:-] 0.6149 152 7 -11.92 -0.8097 MIMAT0003462 mmu-miR-684 66440 Cdc26 aacugaacuucCCUUUUga |||||| aauuuauuuuuGGAAAAaa 3 9 244 262 [mm9:4:62055617-62055635:-] 0.6134 120 0 -4.76 -0.1924 MIMAT0003493 mmu-miR-703 66440 Cdc26 aagaaaggaaGACUUCCAAAa | |||||||| ugcaaccaagCAGAAGGUUUu 2 12 85 105 [mm9:4:62055774-62055794:-] 0.6149 147 7 -13.40 -0.3796 MIMAT0005830 mmu-miR-466l 66440 Cdc26 uuauacacacguacaUAAAUAu |||||| uguuuuuaaaaauaaAUUUAUu 2 8 230 251 [mm9:4:62055628-62055649:-] 0.6134 120 6 -2.15 -0.1675 MIMAT0007874 mmu-miR-1904 66440 Cdc26 ggagggaggucuccUCGUCUUg ||||||| agugugugcaaccaAGCAGAAg 2 9 79 100 [mm9:4:62055779-62055800:-] 0.6149 140 7 -13.59 -0.5216 MIMAT0009425 mmu-miR-1954 66440 Cdc26 uugUCCCAGAG--UGA-GACGUCa ||| |:|| || |||||| agaAGGUUUUCUGUCUCCUGCAGg 2 19 96 119 [mm9:4:62055760-62055783:-] 0.6034 121 6 -18.36 -0.3635 MIMAT0009426 mmu-miR-1955 66440 Cdc26 uuuucgAC-GUCACGUAGGACCCUGa || ||| | |||||||| cuuguaUGCCAGACC--CCUGGGACa 2 20 12 35 [mm9:4:62055844-62055867:-] 0.6149 147 7 -20.88 -0.8652 MIMAT0009433 mmu-miR-1960 66440 Cdc26 ucgggagaagAUUGUCGUGACc ||::||||||| uccuuaaaggUAGUAGCACUGc 2 13 272 293 [mm9:4:62055586-62055607:-] 0.6134 152 7 -19.43 -0.7630 MIMAT0000125 mmu-miR-23b 66440 Cdc26 ccAUUAGGGACC---GUUACACUa | ||:::||| ||||||| auUUAUUUUUGGAAAAAAUGUGAg 2 20 245 268 [mm9:4:62055611-62055634:-] 0.6134 150 7 -16.44 -0.9657 MIMAT0000148 mmu-miR-136 66440 Cdc26 ggUAGUAGUUUUGUUUAC-CUCa ||: |:::|| ||||| ||| uuAUUUUUGGAAAAAAUGUGAGa 2 21 247 269 [mm9:4:62055610-62055632:-] 0.6134 132 0 -9.65 -1.0566 MIMAT0000516 mmu-miR-148a 66440 Cdc26 uguuucaagaCAUCA-CGUGACu ||||| |||||| guccuuaaagGUAGUAGCACUGc 2 13 271 293 [mm9:4:62055586-62055608:-] 0.6134 124 6 -17.26 -0.8677 MIMAT0000532 mmu-miR-23a 66440 Cdc26 ccuuUAGGGACC---GUUACACUa ||:::||| ||||||| auuuAUUUUUGGAAAAAAUGUGAg 2 18 245 268 [mm9:4:62055611-62055634:-] 0.6134 148 7 -16.44 -0.9657 MIMAT0000590 mmu-miR-342-3p 66440 Cdc26 ugcccacgcuaaagacACACUCu |||||| uuauuuuuggaaaaaaUGUGAGa 2 8 247 269 [mm9:4:62055610-62055632:-] 0.6134 120 6 -12.63 -0.1191 MIMAT0000609 mmu-miR-351 66440 Cdc26 guccgaguuucCCGAGGA-GUCCCu | ||||| ||||| gaagguuuucuGUCUCCUGCAGGGa 2 14 97 121 [mm9:4:62055758-62055782:-] 0.6034 121 0 -26.70 -0.4240 MIMAT0000671 mmu-miR-224 66440 Cdc26 uuGCCUUGGUGAUCACUGAAu :| |: | :||||||| ccUGCAGGGAGAGGUGACUUc 2 20 112 132 [mm9:4:62055747-62055767:-] 0.6034 143 7 -13.66 -0.1871 MIMAT0000741 mmu-miR-377 66440 Cdc26 ugUUUUCAACGGAA-ACACACUa :|:|| || ||| ||||||| ggGAGAGGUGACUUCUGUGUGAa 2 21 118 140 [mm9:4:62055739-62055761:-] 0.5918 167 7 -17.65 -0.9341 MIMAT0000746 mmu-miR-381 66440 Cdc26 ugUCUCUCGAACGGGAACAUAu ||| :| || |:||||||| --AGAUGGAUU-CUCUUGUAUg 2 21 1 19 [mm9:4:62055860-62055878:-] 0.6764 162 7 -14.83 -0.1647 MIMAT0003456 mmu-miR-495 66440 Cdc26 uuCUUC--ACGUGG-UACAAACAAa |||| | ||: || |||||| caGAAGGCUUAACUGAUUUUUGUUu 2 21 210 234 [mm9:4:62055645-62055669:-] 0.6134 126 6 -12.47 -0.2271 MIMAT0005850 mmu-miR-1192 66440 Cdc26 uuaaaccagacaaacAAACAAa |||||| aaggcuuaacugauuUUUGUUu 2 8 213 234 [mm9:4:62055645-62055666:-] 0.6134 120 6 -7.78 -0.2271

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G044995 Cdc26 Mus musculus 66440

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Cdc26 mmu-miR-703 beg:87 end:106 pic:3' AAGAAAGGAA-GACTTCCAAAA 5'& || | ||||||||| &5' ------CCAAGCAGAAGGTTTT 3' Cdc26 mcmv-miR-m88-1 beg:119 end:135 pic:3' TCTGGGGCTGTAGCTGAAGAC 5'& || .| |||||||| &5' -------GAGGT-GACTTCTG 3' Cdc26 mmu-miR-547 beg:48 end:62 pic:3' GAGTGAGTTTCTACATGGTTC 5'& |.|| ||||||| &5' --------AGGA-GTACCAA- 3' Cdc26 mcmv-miR-m59-1 beg:129 end:151 pic:3' GACTGCCAGCTCC-GTGACGATT 5'& ||| .|| .||||||. &5' CTGTG---TGAAATTACTGCTG- 3' Cdc26 mmu-miR-1188 beg:142 end:163 pic:3' AGGAC--CGGGTTGGAGTGTGGT 5'& ||| |.|||||||. |. &5' --CTGCTGTCCAACCTTT--CT- 3' Cdc26 mmu-miR-1193 beg:114 end:132 pic:3' CTATCATTTTGCCCACTGGAT 5'& || |.| ||||||.| &5' ---AGGGAGA--GGTGACTT- 3' Cdc26 mmu-miR-150star beg:47 end:61 pic:3' GATAGGGGGTCCGGACATGGTC 5'& |||| |||||| &5' --------CAGGA--GTACCA- 3' Cdc26 mmu-miR-182 beg:3 end:25 pic:3' GCCACACTCAAGATGGTA-ACGGTTT 5'& || |||| . | |||||.| &5' -----TGGATTCTCTTGTATGCCAGA 3' Cdc26 mmu-miR-1929 beg:179 end:200 pic:3' GAGA-CG-AGATATTTCAGGATCTT 5'& ||| || ||| ||||.||| &5' -TCTGGCTTCT------TCCTGGAA 3' Cdc26 mmu-miR-1955 beg:15 end:35 pic:3' TTTTCGAC-GTCACGTAGGACCCTGA 5'& || ||| |||||||| &5' ------TGCCAGACC--CCTGGGAC- 3' Cdc26 mmu-miR-199a-3p beg:123 end:152 pic:3' ATTGGT--TACACGTC--TGATGACA 5'& |.||. .|||| |||.|||| &5' TGACTTCTGTGTGAAATTACTGCTGT 3' Cdc26 mmu-miR-199b beg:123 end:152 pic:3' ATTGGT--TACACGTC--TGATGACA 5'& |.||. .|||| |||.|||| &5' TGACTTCTGTGTGAAATTACTGCTGT 3' Cdc26 mmu-miR-2141 beg:96 end:117 pic:3' TTGAAAAGACTGTGGAGGA 5'& |. ||||||| | ||| | &5' AGGTTTTCTGTCTCCTGC- 3' Cdc26 mmu-miR-23a beg:119 end:140 pic:3' CCTTTAGGGACCGTTACACTA 5'& ||..| || .||||| &5' -GAGGTGACTTCT-GTGTGA- 3' Cdc26 mmu-miR-338-3p beg:29 end:55 pic:3' GTTGTTTTA-GTGACTACGA-CCT 5'& .|||.||| || ||||| ||| &5' -GACAGAATACAATGATGACAGGA 3' Cdc26 mmu-miR-343 beg:103 end:124 pic:3' AGACCCGTGTACTTCCCTCT 5'& |||| | | || ||||||| &5' TCTGT-CTCCTGCAGGGAGA 3' Cdc26 mmu-miR-377 beg:118 end:140 pic:3' TGTTTTCAACGGAAACACACTA 5'& |.|.|| |.| ||||||| &5' --AGAGGTGACTTCTGTGTGA- 3' Cdc26 mmu-miR-380-5p beg:77 end:93 pic:3' GCGTACAAGATACCAGTTGGTA 5'& |..||| |||||| &5' -GTGTGTG-------CAACCA- 3' Cdc26 mmu-miR-381 beg:0 end:20 pic:3' TGTCTCTCGAACGGGAACATAT 5'& ||| .| || |.|||||||. &5' --AGATGGATT-CTCTTGTATG 3' Cdc26 mmu-miR-383 beg:147 end:167 pic:3' TCGGTGTCAGTGG-AAGACTAGA 5'& |.| || ||| |||||||. &5' -GTC-CA---ACCTTTCTGATT- 3' Cdc26 mmu-miR-448 beg:68 end:89 pic:3' TACCCTGTAGGATGTATACGTT 5'& | || ||. . |.||||| &5' --GAGA-ATTAAGTGTGTGCAA 3' Cdc26 mmu-miR-544 beg:198 end:215 pic:3' CTCGAACGATTTTTACGTCTTA 5'& |.|..| |||||| &5' ------GTTGGACC-GCAGAA- 3' Cdc26 mmu-miR-544 beg:82 end:100 pic:3' CTCGAACGATTTTTACGTCTTA 5'& ||| |||||| &5' -----TGCAACCAA-GCAGAA- 3' Cdc26 mmu-miR-665 beg:182 end:198 pic:3' TCCCTGGAGTCGGAGGACCA 5'& |.|.|| .|||||| &5' ---GGCTTC---TTCCTGG- 3' Cdc26 mmu-miR-669j beg:76 end:89 pic:3' ACAAACGTACACTCATATACGT 5'& |||.|.|||| &5' ------------AGTGTGTGCA 3' Cdc26 mmu-miR-670 beg:106 end:122 pic:3' AAGTGGTGTATGTGAGTCCCTA 5'& || || |||||| &5' -TCTCCTG-------CAGGGA- 3' Cdc26 mmu-miR-671-5p beg:171 end:192 pic:3' GAGGTCGGGG-AGGTCCCGAAGGA 5'& |||| |.| ||||||.| &5' ----AGCCAAATTCT-GGCTTCTT 3' Cdc26 mmu-miR-691 beg:100 end:122 pic:3' AAAAGACGGAGAGAAGTCCTTA 5'& |||||||.||| || ||||.| &5' TTTTCTGTCTC-CTGCAGGGA- 3' Cdc26 mcmv-miR-m01-2 beg:3 end:15 pic:3' TGGCAAGGTTGGGCTAAGAGAAG 5'& ||||||||| &5' -------------GATTCTCTT- 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Cdc26 RAID00173156 mmu-miR-495-3p miRNA MIMAT0003456 Cdc26 mRNA 66440 Prediction 0.1828 Cdc26 RAID00312963 mmu-miR-23b-3p miRNA MIMAT0000125 Cdc26 mRNA 66440 Prediction 0.1828 Cdc26 RAID00485962 mmu-miR-351-5p miRNA MIMAT0000609 Cdc26 mRNA 66440 Prediction 0.1828 Cdc26 RAID00739474 mmu-miR-342-3p miRNA MIMAT0000590 Cdc26 mRNA 66440 Prediction 0.1828 Cdc26 RAID01434824 mmu-miR-23a-3p miRNA MIMAT0000532 Cdc26 mRNA 66440 Prediction 0.1828 Cdc26 RAID01999140 mmu-miR-873a-5p miRNA MIMAT0004936 Cdc26 mRNA 66440 Prediction 0.1828 Cdc26 RAID02215876 mmu-miR-377-3p miRNA MIMAT0000741 Cdc26 mRNA 66440 Prediction 0.1828 Cdc26 RAID02311031 mmu-miR-3108-5p miRNA MIMAT0014947 Cdc26 mRNA 66440 Prediction 0.1828 Cdc26 RAID02596371 mmu-miR-7119-3p miRNA MIMAT0028136 Cdc26 mRNA 66440 Prediction 0.1828 Cdc26 RAID02716174 mmu-miR-136-5p miRNA MIMAT0000148 Cdc26 mRNA 66440 Prediction 0.1828 Cdc26 RAID03453395 mmu-miR-1192 miRNA MIMAT0005850 Cdc26 mRNA 66440 Prediction 0.1828 Cdc26 RAID03736955 mmu-miR-381-3p miRNA MIMAT0000746 Cdc26 mRNA 66440 Prediction 0.1828 Cdc26 RAID03999676 mmu-miR-148a-3p miRNA MIMAT0000516 Cdc26 mRNA 66440 Prediction 0.1828 Cdc26 RAID04016667 mmu-miR-224-5p miRNA MIMAT0000671 Cdc26 mRNA 66440 Prediction 0.1828