Trim12a
DNA & RNA Element - AREsite
Gene NameMotifCDS AreaARE AreaEvidence
Trim12a; Trim12ATTTA220-10741213-1217
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0004523mmu-miR-29b*76681Trim12auUUGGUGGUAUACUUUGGUCg |||:: | ||||||| gaAACUGAAACUCCAAACCAGc221181202[mm9:7:111448699-111448720:-]0.50861447-16.49-0.3197
MIMAT0004523mmu-miR-29b*76681Trim12auuuggugguauacUUUGGUCg ||||||| --------aacuccAAACCAGc29114[mm9:7:111448699-111448712:-]0.50861407-14.46-0.1854
MIMAT0000129mmu-miR-30a*76681Trim12cgacguuuguaggcUGACUUUc ||||||| ggugugggggagaaACUGAAAc29170191[mm9:7:111448710-111448731:-]0.50861407-8.85-0.2153
MIMAT0004533mmu-miR-141*76681Trim12aggUUGUGACGUGACCUUCUAc | ||: :| ||||||| aagACCAUGUUAAGGGAAGAUu220378399[mm9:7:111448502-111448523:-]0.51041477-13.52-0.3106
MIMAT0004533mmu-miR-141*76681Trim12aggUUGUGACGUGACCUUCUAc | ||: :| ||||||| aagACCAUGUUAAGGGAAGAUu220190211[mm9:7:111448502-111448523:-]0.51041477-13.52-0.3412
MIMAT0004534mmu-miR-145*76681Trim12guUCUUGUCAUAA-----AGGUCCUUa :||: ||| || ||||||| gaGGAGAAGUUUUCAGCGGCCAGGAAg221302328[mm9:7:111448573-111448599:-]0.50861437-17.01-0.1360
MIMAT0004534mmu-miR-145*76681Trim12guUCUUGUCAUAA-----AGGUCCUUa :||: ||| || ||||||| gaGGAGAAGUUUUCAGCGGCCAGGAAg221114140[mm9:7:111448573-111448599:-]0.50861437-17.01-0.1522
MIMAT0000161mmu-miR-151-3p76681Trim12ggAG-UUCCUCGGAGUCA-GAUc || ||| | |: |||| ||| acUCAAAGUAACUCCAGUGCUAg220354376[mm9:7:111452186-111452208:-]0.50421220-19.03-0.2679
MIMAT0004538mmu-miR-10b*76681Trim12auaaggggaUCUUAGCUUAGAc | || :|||||| auacauaaaAUAAAUGAAUCUu214428449[mm9:7:111452113-111452134:-]0.50001336-7.12-0.3554
MIMAT0004542mmu-miR-191*76681Trim12cccUUGCUUUAGGUUCACG-UCg || | || :| ||||| || cucAAAGUAACUCCAGUGCUAGg220355377[mm9:7:111452185-111452207:-]0.50421230-10.93-0.3411
MIMAT0004546mmu-miR-202-5p76681Trim12uuucuuCAUAUACGUAUCCUu ||| || ||||||| gauguuGUACAU-CAUAGGAu216238257[mm9:7:111452305-111452324:-]0.51471537-10.79-0.9478
MIMAT0000240mmu-miR-20776681Trim12cucccUCCUCUCGGUCCUCUUCg ||| || |||||||| auccaAGGCUAG--AGGAGAAGu219291311[mm9:7:111448590-111448610:-]0.50861517-17.55-0.5867
MIMAT0000240mmu-miR-20776681Trim12cucccuccucUCGGUCC-UCUUCg | ||||| ||||| gagaucuuucAUCCAGGCAGAAGu2147295[mm9:7:111448806-111448829:-]0.50711210-17.47-0.2301
MIMAT0000240mmu-miR-20776681Trim12cucccUCCUCUCGGUCCUCUUCg ||| || |||||||| auccaAGGCUAG--AGGAGAAGu219103123[mm9:7:111448590-111448610:-]0.50861517-17.55-0.6301
MIMAT0000249mmu-miR-30e*76681Trim12cgACAUUUGUAGGCUGACUUUc |||::: : ||||||| ggUGUGGGGGAGAAACUGAAAc221170191[mm9:7:111448710-111448731:-]0.50861447-11.48-0.2153
MIMAT0004574mmu-miR-294*76681Trim12ucuaucccggagguAAAACUCa ||||||| aaagaggaggaaacUUUUGAGu29212233[mm9:7:111448668-111448689:-]0.50861407-14.24-0.2338
MIMAT0004574mmu-miR-294*76681Trim12ucuaucccggagguAAAACUCa ||||||| aaagaggaggaaacUUUUGAGu292445[mm9:7:111448668-111448689:-]0.50861407-14.24-0.2180
MIMAT0004583mmu-miR-130b*76681Trim12ucaucacguUGUCCCUUUCUCa ||| |||||||| ccagcagauACA-GGAAAGAGg214198218[mm9:7:111448683-111448703:-]0.50861517-18.43-0.3158
MIMAT0004583mmu-miR-130b*76681Trim12ucaucacguUGUCCCUUUCUCa ||| |||||||| ccagcagauACA-GGAAAGAGg2141030[mm9:7:111448683-111448703:-]0.50861517-18.43-0.7696
MIMAT0004617mmu-miR-148a*76681Trim12ucagccucacagagUCUUGAaa |||||| cuauauauagagagAGAACUca39405426[mm9:7:111452136-111452157:-]0.50211200-6.95-0.1499
MIMAT0004622mmu-let-7c-1*76681Trim12ccUUUCGAU-CUUCCAACAUGUc |:|| |: :| |||||||| uaAGAGAUGUUGAUGUUGUACAu221227249[mm9:7:111452313-111452335:-]0.51471557-14.30-0.6930
MIMAT0004630mmu-miR-26b*76681Trim12cucggUUCAUUACCUCUUGUCc || | :| |||||||| uuaugAAUUUGUAGAGAACAGc2187596[mm9:7:111452466-111452487:-]0.52361577-12.07-0.7520
MIMAT0004634mmu-miR-31*76681Trim12cuacCGUUAUACAACC-GUAUCGu || | || ||| |||||| aagaGCUUUUUGGUGGCCAUAGCu220326349[mm9:7:111448552-111448575:-]0.50631276-14.55-0.1928
MIMAT0004634mmu-miR-31*76681Trim12cuacCGUUAUACAACC-GUAUCGu || | || ||| |||||| aagaGCUUUUUGGUGGCCAUAGCu220138161[mm9:7:111448552-111448575:-]0.50631276-14.55-0.2141
MIMAT0004636mmu-miR-93*76681Trim12gcccuucacgaucgaGUCGUCa |||||| -----aacuccaaacCAGCAGa28117[mm9:7:111448696-111448712:-]0.50861206-10.00-0.2432
MIMAT0000544mmu-miR-129-3p76681Trim12uaCGAAAAACC-CC-------AUUCCCGAa ||||||||| || |||||||| gaGCUUUUUGGUGGCCAUAGCUAAGGGCUg221328357[mm9:7:111448544-111448573:-]0.50631587-26.71-0.1877
MIMAT0000544mmu-miR-129-3p76681Trim12uaCGAAAAACC-CC-------AUUCCCGAa ||||||||| || |||||||| gaGCUUUUUGGUGGCCAUAGCUAAGGGCUg221140169[mm9:7:111448544-111448573:-]0.50631587-26.71-0.2085
MIMAT0004659mmu-miR-10a*76681Trim12auaAGGGGAUCUAUGCUUAAAc |::: | ||:|||||| gaaUUUUAUUUUUAUGAAUUUg2206485[mm9:7:111452477-111452498:-]0.52361356-12.71-0.1143
MIMAT0004659mmu-miR-10a*76681Trim12auaaggggaucuaugCUUAAAc |||||| aaauaagaaggagugGAAUUUu284970[mm9:7:111452492-111452513:-]0.52361206-4.21-0.1031
MIMAT0004660mmu-miR-19a*76681Trim12caUCACG-UUGAU-A-CGUUUUGAu ||| | || || | |||||||| ugAGUCCUAAGUACUGGCAAAACUc221229253[mm9:7:111448648-111448672:-]0.50861577-13.02-0.2144
MIMAT0004660mmu-miR-19a*76681Trim12caUCACG-UUGAU-A-CGUUUUGAu ||| | || || | |||||||| ugAGUCCUAAGUACUGGCAAAACUc2214165[mm9:7:111448648-111448672:-]0.50861577-13.02-0.2003
MIMAT0004663mmu-miR-200c*76681Trim12gguuUGU-GACGACCCA-UUCUGc ||| | | ||||| ||||| acuuACAUCAGGUGGGUAAAGACc219360383[mm9:7:111448518-111448541:-]0.51041290-18.27-0.3218
MIMAT0004663mmu-miR-200c*76681Trim12gguuUGU-GACGACCCA-UUCUGc ||| | | ||||| ||||| acuuACAUCAGGUGGGUAAAGACc219172195[mm9:7:111448518-111448541:-]0.51041290-18.27-0.3531
MIMAT0004665mmu-miR-218-1*76681Trim12ccacgaacugccUUGGUACAAa :|||||||| cagguggguaaaGACCAUGUUa211368389[mm9:7:111448512-111448533:-]0.51041467-17.17-0.7280
MIMAT0004665mmu-miR-218-1*76681Trim12ccacgaacugccUUGGUACAAa :|||||||| cagguggguaaaGACCAUGUUa211180201[mm9:7:111448512-111448533:-]0.51041467-17.17-0.7698
MIMAT0004759mmu-miR-466a-5p76681Trim12auACAUG--UACAUGUGUGUGUAu || || || | |:||||||| caUGGACAAAUUUUCGCACACAUc2211942[mm9:7:111448859-111448882:-]0.50711597-16.15-0.2917
MIMAT0003120mmu-miR-483*76681Trim12uucugcccuccCCUCCUCACu | ||||||| ugcacaaauaaGAAGGAGUGg2114464[mm9:7:111452498-111452518:-]0.52361427-13.17-0.9496
MIMAT0003166mmu-miR-54676681Trim12cuGAGGCACGGUGGUa |||: ||||||| aaCUCUAGGCCACCAa215249264[mm9:7:111448637-111448652:-]0.50861507-20.55-0.7511
MIMAT0003166mmu-miR-54676681Trim12cuGAGGCACGGUGGUa |||: ||||||| aaCUCUAGGCCACCAa2156176[mm9:7:111448637-111448652:-]0.50861507-20.55-0.7883
MIMAT0003190mmu-miR-291b-3p76681Trim12uguUUGUUUUACCUAC-GUGAAa |:| ||: || || ||||| cauAGCUAAG-GGCUGUCACUUa220343364[mm9:7:111448537-111448558:-]0.51041210-9.68-0.3992
MIMAT0003190mmu-miR-291b-3p76681Trim12uguUUGUUUUACCUAC-GUGAAa |:| ||: || || ||||| cauAGCUAAG-GGCUGUCACUUa220155176[mm9:7:111448537-111448558:-]0.51041210-9.68-0.4349
MIMAT0003891mmu-miR-770-3p76681Trim12ggucgaggugcaguCCGGGUgc |||||| aaaauaaaacaaauGGCCCAgc39467488[mm9:7:111448413-111448434:-]0.51041200-13.58-0.1010
MIMAT0003891mmu-miR-770-3p76681Trim12ggucgaggugcaguCCGGGUgc |||||| aaaauaaaacaaauGGCCCAgc39279300[mm9:7:111448413-111448434:-]0.51041200-13.58-0.1131
MIMAT0003736mmu-miR-67076681Trim12aaGUGGUGUA-UGUGA-GUCCCUa || :| || :|| | |||||| acCAAUAGAUGGCAAUGCAGGGAc221260283[mm9:7:111448618-111448641:-]0.50861236-16.67-0.4854
MIMAT0003736mmu-miR-67076681Trim12aaGUGGUGUA-UGUGA-GUCCCUa || :| || :|| | |||||| acCAAUAGAUGGCAAUGCAGGGAc2217295[mm9:7:111448618-111448641:-]0.50861236-16.67-0.5276
MIMAT0004825mmu-miR-423-5p76681Trim12uuucagagcgagaGACGGGGAGu | ||||||| ccaaaccaaccagCAGCCCCUCc211129151[mm9:7:111448750-111448772:-]0.50001427-16.09-0.3242
MIMAT0003461mmu-miR-68376681Trim12cuccuGUGUCGAAUGUCGUcc :::|| |||||| gaauuUGUAGAGAACAGCAca3177999[mm9:7:111452463-111452483:-]0.52361240-10.15-0.1718
MIMAT0003461mmu-miR-68376681Trim12cuccugugucgaauGUCGUCc |||||| ----aacuccaaacCAGCAGa28117[mm9:7:111448696-111448712:-]0.50861206-8.33-0.2432
MIMAT0004189mmu-miR-693-3p76681Trim12aaUGUCGGUGUAG-ACUUUCGAcg || :| |||: | |||||| acACCCUCUCAUUAUUAAAGCUau322385408[mm9:7:111452154-111452177:-]0.50421360-10.65-0.1345
MIMAT0003488mmu-miR-69876681Trim12ucccUUCCUU-UGCUCUUac ||| || ||||||| ucaaAAGAAACACGAGAAac316427446[mm9:7:111448455-111448474:-]0.51041380-9.58-0.1110
MIMAT0003488mmu-miR-69876681Trim12ucccUUCCUU-UGCUCUUac ||| || ||||||| ucaaAAGAAACACGAGAAac316239258[mm9:7:111448455-111448474:-]0.51041380-9.58-0.1243
MIMAT0003502mmu-miR-71276681Trim12ccauggcgggcccACUUCCUc ||||||| aaaaguuaaaucuUGAAGGAg2999119[mm9:7:111452443-111452463:-]0.51481407-13.78-0.8383
MIMAT0003781mmu-miR-676*76681Trim12cguucAGGAUUCCAACAUCUCa |: |:| |||||||| uauuuUUAUGAAUUUGUAGAGa2187091[mm9:7:111452471-111452492:-]0.52361537-10.73-1.2211
MIMAT0004210mmu-miR-80476681Trim12agguccaCUCCUUGUUGAGUGu ||| :| ||||||: auauauaGAGAGAGAACUCAUa216407428[mm9:7:111452134-111452155:-]0.50211390-15.68-0.1196
MIMAT0004237mmu-miR-74276681Trim12aaaugggucguaccaCCGAAAg |||||| cauaggauaaucuaaGGCUUUa28250271[mm9:7:111452291-111452312:-]0.51471206-11.46-0.1198
MIMAT0004850mmu-miR-883b-5p76681Trim12acUGACGAUGGGUAAGA-GUCAu :|| :||::|| ||| |||| agGCU-UUAUUCA-UCUGCAGUa221264284[mm9:7:111452278-111452298:-]0.51471200-19.52-0.9155
MIMAT0004850mmu-miR-883b-5p76681Trim12acugacgauggguaaGAGUCAu |||||| auucaucugcaguagCUCAGUa28271292[mm9:7:111452270-111452291:-]0.51471206-15.95-0.1070
MIMAT0004875mmu-miR-466b-5p76681Trim12guACAUG--UACAUGUGUGUGUAg || || || | |:||||||| caUGGACAAAUUUUCGCACACAUc2211942[mm9:7:111448859-111448882:-]0.50711597-22.16-0.2917
MIMAT0004877mmu-miR-466c-5p76681Trim12auACAUG--UACGUGUGUGUGUAg || || || : |:||||||| caUGGACAAAUUUUCGCACACAUc2211942[mm9:7:111448859-111448882:-]0.50711557-20.06-0.2942
MIMAT0004879mmu-miR-466e-5p76681Trim12auACAUG--UACAUGUGUGUGUAg || || || | |:||||||| caUGGACAAAUUUUCGCACACAUc2211942[mm9:7:111448859-111448882:-]0.50711597-20.06-0.2917
MIMAT0004892mmu-miR-56876681Trim12cacacAUAUGUAAAUA-UGUa |: :||||||| ||| auccaUGGGCAUUUAUGACAc216129149[mm9:7:111452413-111452433:-]0.50671230-8.63-0.3463
MIMAT0005836mmu-miR-118676681Trim12guacGGAAAU-UAAGGUCGUGag ::| || | |||||| ugaaUUUGUAGAGAACAGCACaa31978100[mm9:7:111452462-111452484:-]0.52361210-10.47-0.1644
MIMAT0005837mmu-miR-118776681Trim12aaugUGUGUAUGUGUGUGUGUAu ||| || : |:||||||| auggACAAAUUUUCGCACACAUc2202042[mm9:7:111448859-111448881:-]0.50711637-17.48-0.2942
MIMAT0005851mmu-miR-119376681Trim12cuaucauuUUGCCCACUGGau ||:| |||||| cuuuuauuAAUGUGUGACCcg314446466[mm9:7:111448435-111448455:-]0.51041330-12.70-0.1400
MIMAT0005851mmu-miR-119376681Trim12cuaucauuUUGCCCACUGGau ||:| |||||| cuuuuauuAAUGUGUGACCcg314258278[mm9:7:111448435-111448455:-]0.51041330-12.70-0.1563
MIMAT0005856mmu-miR-119576681Trim12acucguccgaccggagCUUGAGu |||||| gcuauauauagagagaGAACUCa28404426[mm9:7:111452136-111452158:-]0.50211206-17.42-0.1716
MIMAT0007866mmu-miR-190576681Trim12gauggcgcaccaCCCUGACCAc ||||||||| gaagaaaagccaGGGACUGGUu21199120[mm9:7:111448781-111448802:-]0.50001507-19.01-0.3460
MIMAT0007877mmu-miR-1894-5p76681Trim12ucuCCGUCCAC--CAUCCCCUCUc ||| || | ||:||||||| ucuGGCUGGGGGUGUGGGGGAGAa220160183[mm9:7:111448718-111448741:-]0.50431627-29.36-0.2459
MIMAT0007877mmu-miR-1894-5p76681Trim12ucuccguccaCCAUCCCCUCUc || |||||||| ccucuggccaGGAAGGGGAGAu2135576[mm9:7:111448825-111448846:-]0.50711527-22.32-0.1163
MIMAT0009408mmu-miR-194376681Trim12agguccacggGUCUAGGAGGGAa ||| ||||||| aaccaaccagCAGCCCCUCCCUu214132154[mm9:7:111448747-111448769:-]0.50001497-24.60-0.1393
MIMAT0009408mmu-miR-194376681Trim12agGUCCACGGGUCUAGGAG-GGAa || | ::::|| |||| ||| caCACAUCUUUGGACCCUCACCUc2223558[mm9:7:111448843-111448866:-]0.50711210-14.38-0.1215
MIMAT0009421mmu-miR-669o76681Trim12uguaUUUGUACGUGUGUG-UUGAu ||: | ||| ||| |||| cagcAAGAAGGCAGCCACAAACUc220405428[mm9:7:111448473-111448496:-]0.51041230-12.66-0.5967
MIMAT0009421mmu-miR-669o76681Trim12uguaUUUGUACGUGUGUG-UUGAu ||: | ||| ||| |||| cagcAAGAAGGCAGCCACAAACUc220217240[mm9:7:111448473-111448496:-]0.51041230-12.66-0.6385
MIMAT0009425mmu-miR-195476681Trim12uugUCCCAGA-GUG-AGACGUCa ||| |:| : | ||||||| cuaAGGCUUUAUUCAUCUGCAGu219261283[mm9:7:111452279-111452301:-]0.51471487-18.45-0.8699
MIMAT0009427mmu-miR-669n76681Trim12ugUGUGUAGGUGUGUGUUUa || ||| |:|||:||| gaACUCAU--AUACAUAAAa219420437[mm9:7:111452125-111452142:-]0.50001390-10.33-0.1346
MIMAT0009427mmu-miR-669n76681Trim12uguguguaggUG-UGUGUUUa || :|||||| uuuguagagaACAGCACAAAa21182102[mm9:7:111452460-111452480:-]0.52361256-8.00-0.1427
MIMAT0009445mmu-miR-1274a76681Trim12accgcggacuUGUCCCUG-GACu :||||||| ||| agauggcaauGCAGGGACUCUGg213266288[mm9:7:111448613-111448635:-]0.50861200-25.51-0.3255
MIMAT0009445mmu-miR-1274a76681Trim12accgcggacuUGUCCCUG-GACu :||||||| ||| agauggcaauGCAGGGACUCUGg21378100[mm9:7:111448613-111448635:-]0.50861200-25.51-0.3593
MIMAT0011222mmu-miR-214676681Trim12guguaCCU-UGGGAAG-AGGUg ||| |:|:||| |||| gaaggGGAGAUCUUUCAUCCAg2166687[mm9:7:111448814-111448835:-]0.50711220-16.77-0.1317
MIMAT0012774mmu-miR-66476681Trim12auccgaccccUCAUUUACUUAu | ||||||||| auauacauaaAAUAAAUGAAUc213426447[mm9:7:111452115-111452136:-]0.50001527-6.59-1.2429
MIMAT0000128mmu-miR-30a76681Trim12gaaggUCAGCUCCUACAA-AUGu || :| |||||| ||| cuaagAGAUGUUGAUGUUGUACa218226248[mm9:7:111452314-111452336:-]0.51471210-12.90-1.0732
MIMAT0000130mmu-miR-30b76681Trim12ucgaCUC-ACAUCCUACAA-AUGu ||| ||| |||||| ||| cuaaGAGAUGU-UGAUGUUGUACa219226248[mm9:7:111452314-111452336:-]0.51471230-15.51-1.0757
MIMAT0000147mmu-miR-135a76681Trim12agUGUA-UCCUUAUUUUUC-GGUAu |||| ||| : : |||| |||| uuACAUCAGGUGGGUAAAGACCAUg222362386[mm9:7:111448515-111448539:-]0.51041280-18.17-0.5814
MIMAT0000147mmu-miR-135a76681Trim12agUGUA-UCCUUAUUUUUC-GGUAu |||| ||| : : |||| |||| uuACAUCAGGUGGGUAAAGACCAUg222174198[mm9:7:111448515-111448539:-]0.51041280-18.17-0.6229
MIMAT0000150mmu-miR-13876681Trim12gccggacUAAGUGUUGUGGUCGa |||:|::|||||||| caugggcAUUUAUGACACCAGCu217132154[mm9:7:111452408-111452430:-]0.50671687-25.53-0.6031
MIMAT0004577mmu-miR-29976681Trim12uucgccaAAUGG-CA-GGGUGUAu || || || ||||||| gguuccaUUCCCAGUACCCACAUu216327350[mm9:7:111452212-111452235:-]0.50421497-18.24-0.4710
MIMAT0000381mmu-miR-34c76681Trim12cgUUA--GUCGAUUGAUGUGACGGa ||| |||:||:: ||||||| cuAAUUCCAGUUAGU--CACUGCCa222190212[mm9:7:111452350-111452372:-]0.50731577-20.48-1.0484
MIMAT0000382mmu-miR-34b-5p76681Trim12ugUUA--GUCGAUUAAUGUGACGGa ||| |||:||:| ||||||| cuAAUUCCAGUUAGU--CACUGCCa222190212[mm9:7:111452350-111452372:-]0.50731617-20.63-1.0484
MIMAT0000514mmu-miR-30c76681Trim12cgACUCUC-ACAUCCUACAA-AUGu | |||| ||| |||||| ||| acUAAGAGAUGU-UGAUGUUGUACa222225248[mm9:7:111452314-111452337:-]0.51471300-19.44-1.0757
MIMAT0000515mmu-miR-30d76681Trim12gaaggUCAGCCCCUACAA-AUGu || :| |||||| ||| cuaagAGAUGUUGAUGUUGUACa218226248[mm9:7:111452314-111452336:-]0.51471210-11.31-1.0757
MIMAT0000542mmu-miR-34a76681Trim12uguuGGUCGAUUCUGUGACGGu ||||:| || ||||||| aauuCCAGUU-AGUCACUGCCa219192212[mm9:7:111452350-111452370:-]0.50731647-27.32-1.0660
MIMAT0000612mmu-miR-135b76681Trim12agUGUA-UCCUUACUUUUC-GGUAu |||| ||| : | |||| |||| uuACAUCAGGUGGGUAAAGACCAUg222362386[mm9:7:111448515-111448539:-]0.51041320-17.88-0.5814
MIMAT0000612mmu-miR-135b76681Trim12agUGUA-UCCUUACUUUUC-GGUAu |||| ||| : | |||| |||| uuACAUCAGGUGGGUAAAGACCAUg222174198[mm9:7:111448515-111448539:-]0.51041320-17.88-0.6229
MIMAT0000663mmu-miR-21876681Trim12uguaccaaucuaguUCGUGUu |||||| aauuuguagagaacAGCACAa2880100[mm9:7:111452462-111452482:-]0.52361206-12.50-0.2022
MIMAT0000667mmu-miR-3376681Trim12acGUUACGUUGAUGUUACGUg |||| :|: :||||||| acCAAU-AGAUGGCAAUGCAg220260279[mm9:7:111448622-111448641:-]0.50861537-11.87-0.1687
MIMAT0000667mmu-miR-3376681Trim12acGUUACGUUGAUGUUACGUg |||| :|: :||||||| acCAAU-AGAUGGCAAUGCAg2207291[mm9:7:111448622-111448641:-]0.50861537-11.87-0.1894
MIMAT0000677mmu-miR-7a76681Trim12uguuguuuuagugaUCAGAAGGu :||||||| -------------gGGUCUUCCu210110[mm9:7:111448891-111448899,111449350-111449350:-]0.51951417-11.72-0.1639
MIMAT0000678mmu-miR-7b76681Trim12uguuguuuuagugUUCAGAAGGu ::||||||| -------------GGGUCUUCCu211110[mm9:7:111448891-111448899,111449350-111449350:-]0.51951427-11.57-0.1639
MIMAT0000711mmu-miR-36576681Trim12uauuCCUAAAAAUCCCCGUAAu ||| | | ||||||| uauuGGA--UCCAUGGGCAUUu219123142[mm9:7:111452420-111452439:-]0.50671437-13.57-0.7395
MIMAT0000741mmu-miR-37776681Trim12ugUUUUCAACGGAA--ACACACUa :||| || : || ||||||| gaGAAACUUUUAUUAAUGUGUGAc221440463[mm9:7:111448438-111448461:-]0.51041557-9.28-0.8246
MIMAT0000741mmu-miR-37776681Trim12uguuuucaacgGAAACACACUa || ||||||| ucucuacagagCUCUGUGUGAu212154175[mm9:7:111452387-111452408:-]0.50731477-15.19-0.3133
MIMAT0000741mmu-miR-37776681Trim12ugUUUUCAACGGAA--ACACACUa :||| || : || ||||||| gaGAAACUUUUAUUAAUGUGUGAc221252275[mm9:7:111448438-111448461:-]0.51041557-9.28-0.8644
MIMAT0001542mmu-miR-449a76681Trim12ugGUCGAUUGUUAUGUGACGGu |||:||:: ||||||| ucCAGUUAGU----CACUGCCa221195212[mm9:7:111452350-111452367:-]0.50731477-25.57-1.0589
MIMAT0003128mmu-miR-48576681Trim12cuUAAGUAGUGCCGGUCG-GAGa |||:|| || ||||| ||| gcAUUUAUGAC-ACCAGCUCUCu221137158[mm9:7:111452404-111452425:-]0.50671300-20.75-0.2899
MIMAT0003172mmu-miR-542-3p76681Trim12aaaGUCAAUAGUUAGACAGUGu :|| || :: ||||||| ccaUAGCUA-AGGGCUGUCACu220342362[mm9:7:111448539-111448559:-]0.51041457-12.72-0.2112
MIMAT0003172mmu-miR-542-3p76681Trim12aaaGUCAAUAGUUAGACAGUGu :|| || :: ||||||| ccaUAGCUA-AGGGCUGUCACu220154174[mm9:7:111448539-111448559:-]0.51041457-12.72-0.2341
MIMAT0004186mmu-miR-301b76681Trim12cgaAACUGUUAUG---GUAACG-UGAc || ||:||| |||||| ||| ccaUUCCCAGUACCCACAUUGCAACUc221331357[mm9:7:111452205-111452231:-]0.50421270-14.44-0.8620
MIMAT0003460mmu-miR-449c76681Trim12ggucGAUCGUUACGUGACGGa | ||: | ||||||| aauuCCAGUUAGUCACUGCCa218192212[mm9:7:111452350-111452370:-]0.50731497-25.04-1.0736
MIMAT0004324mmu-miR-181d76681Trim12uggGUGGCUGUUG-UUACUUACAa :|| | ||: ||||||| | auaUACAUAAAAUAAAUGAAUCUu221426449[mm9:7:111452113-111452136:-]0.50001270-8.51-0.1273
MIMAT0004853mmu-miR-87476681Trim12agCCAGGGAGCC-CGGU-CCCGUc | ||: |:|| ||| ||||| gaGAUCUAUUGGAUCCAUGGGCAu221117140[mm9:7:111452422-111452445:-]0.50611230-18.83-0.5697
MIMAT0004896mmu-miR-590-3p76681Trim12ugaucGAAUAUGUAUUUUAau | |||||||||||| gaacuCAUAUACAUAAAAUaa317420440[mm9:7:111452122-111452142:-]0.50001520-11.06-0.1056
MIMAT0005447mmu-miR-449b76681Trim12cgGUCGAUUGUUGUGACGGa |||:||:: ||||||| ucCAGUUAGU--CACUGCCa219195212[mm9:7:111452350-111452367:-]0.50731557-24.51-1.0484
DNA & RNA Element - TRANSFAC
AccessionASDescriptionSpeciesEntrezPubmedBinding Info
G073906Trim12aMus musculus76681
DNA & RNA Element - RepTar
Gene NamemiRNABeginEndProfile
Trim12mmu-miR-20astarbeg:268end:280pic:3' GAAATTCACGAGCATTACGTCA 5'& || ||||||| &5' --------GC----AATGCAG- 3'
Trim12mmu-miR-19astarbeg:236end:253pic:3' CATCACGTTGATACGTTTTGAT 5'& |. |||. |||||||| &5' -----GT-ACTG-GCAAAACT- 3'
Trim12mmu-miR-466a-5pbeg:30end:42pic:3' ATACATGTACATGTGTGTGTAT 5'& |.||||||| &5' ------------CGCACACAT- 3'
Trim12mmu-miR-466b-5pbeg:30end:43pic:3' GTACATGTACATGTGTGTGTAG 5'& |.|||||||| &5' ------------CGCACACATC 3'
Trim12mmu-miR-466c-5pbeg:30end:43pic:3' ATACATGTACGTGTGTGTGTAG 5'& |.|||||||| &5' ------------CGCACACATC 3'
Trim12mmu-miR-466e-5pbeg:30end:43pic:3' ATACATGTACATGTGTGTGTAG 5'& |.|||||||| &5' ------------CGCACACATC 3'
Trim12mmu-miR-145starbeg:312end:328pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& ||| ||||||| &5' ------CAGCGG--CCAGGAA- 3'
Trim12mmu-miR-1943beg:135end:155pic:3' AGGTCCACGGGTCTAGGAGGGAA 5'& |||| ||| |||||||| &5' -CCAGCAGCC-----CCTCCCTT 3'
Trim12mmu-miR-1943beg:0end:14pic:3' AGGTCCACGGGTCTAGGAGGGAA 5'& || |.|. |||||||| &5' ----GG-GTCT---TCCTCCCT- 3'
Trim12mghv-miR-M1-3beg:46end:59pic:3' TTCGCGTTGAGGACGAGTGGAG 5'& || |||||||| &5' ----------CC--CTCACCTC 3'
Trim12mmu-miR-542-3pbeg:352end:362pic:3' AAAGTCAATAGTTAGACAGTGT 5'& ||||||| &5' --------------CTGTCAC- 3'
Trim12mmu-miR-130bstarbeg:201end:218pic:3' TCATCACGTTGTCCCTTTCTCA 5'& | ||| |||||||| &5' ------GATACA-GGAAAGAG- 3'
Trim12mmu-miR-546beg:247end:264pic:3' CTGAGGCACGGTGGTA 5'& ||||. ||||||| &5' -ACTCTAGGCCACCA- 3'
Trim12mmu-miR-423-5pbeg:141end:151pic:3' TTTCAGAGCGAGAGACGGGGAGT 5'& ||||||| &5' ---------------GCCCCTC- 3'
Trim12mmu-miR-1894-5pbeg:57end:76pic:3' TCTCC-GTCCACCATCCCCTCTC 5'& || |||| |||||||| &5' ---GGCCAGGA---AGGGGAGA- 3'
Trim12mmu-miR-7abeg:0end:10pic:3' TGTTGTTTTAGTGATCAGAAGGT 5'& .||||||| &5' --------------GGTCTTCC- 3'
Trim12mmu-miR-7bbeg:0end:10pic:3' TGTTGTTTTAGTGTTCAGAAGGT 5'& ..||||||| &5' -------------GGGTCTTCC- 3'
Trim12mcmv-miR-m107-1-5pbeg:325end:344pic:3' CCACTGAGCTCTGC---TCACTGGC 5'& ||| .|||.|| &5' --------GAGCTTTTTGGTGGCC- 3'
Trim12mmu-miR-129-3pbeg:336end:357pic:3' TACGAAAAACC-CC-------ATTCCCGAA 5'& || || |||||||| &5' ---------GGTGGCCATAGCTAAGGGCT- 3'
Trim12mmu-miR-141starbeg:379end:399pic:3' AGGTTGTGACGTGA-CCTTCTAC 5'& ||| ||. ||||||| &5' -CCA----TGTTAAGGGAAGAT- 3'
Trim12mmu-miR-145starbeg:197end:214pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& |.||| || |||||| &5' ----AGCAG-ATA--CAGGAA- 3'
Trim12mmu-miR-146bbeg:295end:317pic:3' TCGGATA-CCTTAAGTCAAGAGT 5'& || ||| |||. ||||.||| &5' AGGCTAGAGGAGA--AGTTTTCA 3'
Trim12mmu-miR-150beg:161end:181pic:3' GTGACCATGTTCCCA-ACCCTCT 5'& .|||| |||| ||||.|| &5' -GCTGG-----GGGTGTGGGGGA 3'
Trim12mmu-miR-1894-5pbeg:160end:183pic:3' TCTCCG---TCCACCATCCCCTCTC 5'& ||| .||| ||.||||||| &5' ---GGCTGGGGGT-GTGGGGGAGA- 3'
Trim12mmu-miR-1897-5pbeg:280end:299pic:3' GGGGGAGAAAGAGGTAGGTTTC 5'& |||| .|||||||.| &5' ----CTCTGG--TCATCCAAGG 3'
Trim12mmu-miR-1904beg:74end:94pic:3' GGAGGG-AGGTCTCCTCGTCTTG 5'& || | ||||| |||||| &5' -CTTTCATCCAG----GCAGAA- 3'
Trim12mmu-miR-1930beg:161end:180pic:3' TGCGACGTCCATGATACCTCCA 5'& |||| .||| .|||.|| &5' --GCTGGGGGT---GTGGGGG- 3'
Trim12mmu-miR-1937bbeg:164end:181pic:3' ACCCCCGAGCAGGCCCTA 5'& |||||. .| |||| &5' -GGGGGTGTGG--GGGA- 3'
Trim12mmu-miR-196bbeg:400end:423pic:3' GGGTTGTTG-TCCTTTGATGGAT 5'& |.||.||| ||| |.| || &5' CTCAGCAAGAAGGCAGCCAC--- 3'
Trim12mmu-miR-1982.1beg:158end:183pic:3' GAC--ACCCTCTTGTATCCCACTCT 5'& ||| ||||.| .|.||| |||| &5' CTGGCTGGGGGT--GTGGGG-GAGA 3'
Trim12mmu-miR-199bstarbeg:228end:246pic:3' CTTGTCCATCA-GATTTGTGACCC 5'& ||| ||||..||||| &5' --------AGTCCTAAGTACTGG- 3'
Trim12mmu-miR-210beg:11end:39pic:3' AGTCGGCGACA-GTGT----GCGTGTC 5'& || ||| || || |||||| &5' TCCGCCA-TGGACAAATTTTCGCACA- 3'
Trim12mmu-miR-218-1starbeg:368end:389pic:3' CCACGAACTGCCTTGGTACAAA 5'& |||| | .|||||||| &5' GGTGG--GTAAAGACCATGTT- 3'
Trim12mmu-miR-294beg:202end:229pic:3' TGTGTGTTTTC-CCTTCG-TGAAA 5'& |.||| .|||| |||.| ||||| &5' ATACAGGAAAGAGGAGGAAACTTT 3'
Trim12mmu-miR-302bstarbeg:372end:393pic:3' TCTTTCGTAAG-GGTACAATTTCA 5'& ..|.| |||||||||.| &5' ---GGGTAAAGACCATGTTAAGG- 3'
Trim12mmu-miR-3099starbeg:312end:333pic:3' GTTCCCGA-CCTTCCTTCGACC 5'& ||. ||| ||||| |||| &5' CAGCGGCCAGGAAG--AGCT-- 3'
Trim12mmu-miR-343beg:162end:183pic:3' AGACCCGTGTACTTCCCTCT 5'& ||||| . || .|||||| &5' -CTGGGGGTGTG-GGGGAGA 3'
Trim12mmu-miR-383beg:273end:291pic:3' TCGGTGTCAGTGGAAGACTAGA 5'& .||| || ||||.|| &5' ----GCAGGGAC--TCTGGTC- 3'
Trim12mmu-miR-423-5pbeg:0end:20pic:3' TTTCAGAGCGAGAGACGG-GGAGT 5'& ..||||. ||| || || || &5' -GGGTCTTCCTCCCT-CCGCC--- 3'
Trim12mmu-miR-465a-3pbeg:273end:291pic:3' AGATGAATCTTTCC-GGGACTAG 5'& | |.|| |.|||.|| &5' --------GCAGGGACTCTGGTC 3'
Trim12mmu-miR-465b-3pbeg:273end:291pic:3' AGATGAATCTTTCC-GGGACTAG 5'& | |.|| |.|||.|| &5' --------GCAGGGACTCTGGTC 3'
Trim12mmu-miR-465c-3pbeg:273end:291pic:3' AGATGAATCTTTCC-GGGACTAG 5'& | |.|| |.|||.|| &5' --------GCAGGGACTCTGGTC 3'
Trim12mmu-miR-486beg:196end:213pic:3' GAGCCCCGTCGAGTC-ATGTCCT 5'& |||| || ||||||| &5' -------CAGC--AGATACAGGA 3'
Trim12mmu-miR-488beg:428end:452pic:3' CTGGTTCTTTGT-CG----GAAAGTT 5'& |||||||| | ||||.| &5' ----AAGAAACACGAGAAACTTTTA- 3'
Trim12mmu-miR-511beg:403end:418pic:3' ACTCACGTCTCG-TTTTCCGTA 5'& ||| |.|||||| &5' ---------AGCAAGAAGGCA- 3'
Trim12mmu-miR-532-3pbeg:155end:180pic:3' ACGT--TCGGAACCCACACCCTCC 5'& |. .||. |||||||||.| &5' -GTTCTGGCTGGGGGTGTGGGGG- 3'
Trim12mmu-miR-540-3pbeg:43end:64pic:3' GGTCCT---AGCTGGAGACTGGA 5'& ||| || |||||||.|| &5' ---GGACCCTC-ACCTCTGGCC- 3'
Trim12mmu-miR-615-5pbeg:36end:54pic:3' CTAGGCTCGTGGCC-CCTGGGGG 5'& ||.| ||||||.| &5' --------CATCTTTGGACCCTC 3'
Trim12mmu-miR-669gbeg:259end:279pic:3' TAGTACAGTTGTGTA-TGTTACGT 5'& |||.| || .||||||| &5' -------CAATAGATGGCAATGCA 3'
Trim12mmu-miR-670beg:104end:115pic:3' AAGTGGTGTATGTGAGTCCCTA 5'& .| |||||| &5' ------------GC-CAGGGA- 3'
Trim12mmu-miR-670beg:268end:283pic:3' AAGTGGTGTATGTGA-GTCCCTA 5'& .|| |||||| &5' ----------GCAATGCAGGGA- 3'
Trim12mmu-miR-691beg:198end:214pic:3' AAAAGACGGAGAGAAGTCCTTA 5'& || |||||| &5' ------GCAGATA--CAGGAA- 3'
Trim12mmu-miR-691beg:52end:69pic:3' AAAAGACGGAGAGAAGTCCTTA 5'& ||||| |||||| &5' -------CCTCTGGCCAGGAA- 3'
Trim12mmu-miR-692beg:293end:309pic:3' CTCACTCCGCGAGTTTCTCTA 5'& |||| .|.|||| &5' -----AGGCTA--GAGGAGA- 3'
Trim12mmu-miR-696beg:190end:212pic:3' GGGT---GTCGTTCGTGTGCG 5'& ||| |||||. .||| | &5' -CCAAACCAGCAGATACAGG- 3'
Trim12mmu-miR-696beg:397end:417pic:3' GGGTG--TCGTTCGTGTGCG 5'& |||| |||||| | || &5' -CCACTCAGCAAGA--AGGC 3'
Trim12mmu-miR-702beg:367end:378pic:3' CTCGCCCCATTTCCCACCCGT 5'& ||||||.| &5' -------------GGTGGGTA 3'
Trim12mmu-miR-709beg:1end:20pic:3' AGGAGGACGGAGACGGAGG 5'& ||.|||| |||| ||| &5' TCTTCCTCCCTCCGCC--- 3'
Trim12mmu-miR-883a-5pbeg:400end:410pic:3' CATTGACGATGAAGAGAGTCGT 5'& ||||||| &5' ---------------CTCAGCA 3'
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
Trim12aRAID00021292mmu-miR-7000-3pmiRNAMIMAT0027903Trim12amRNA76681Prediction0.1828
Trim12aRAID00118829mmu-miR-138-5pmiRNAMIMAT0000150Trim12amRNA76681Prediction0.1828
Trim12aRAID00423506mmu-miR-301b-3pmiRNAMIMAT0004186Trim12amRNA76681Prediction0.1828
Trim12aRAID00449673mmu-miR-34a-5pmiRNAMIMAT0000542Trim12amRNA76681Prediction0.1828
Trim12aRAID00515461mmu-miR-33-5pmiRNAMIMAT0000667Trim12amRNA76681Prediction0.1828
Trim12aRAID00638473mmu-miR-3113-5pmiRNAMIMAT0014959Trim12amRNA76681Prediction0.1828
Trim12aRAID00856281mmu-miR-546miRNAMIMAT0003166Trim12amRNA76681Prediction0.1828
Trim12aRAID01070249mmu-miR-135b-5pmiRNAMIMAT0000612Trim12amRNA76681Prediction0.1828
Trim12aRAID01075981mmu-miR-365-3pmiRNAMIMAT0000711Trim12amRNA76681Prediction0.1828
Trim12aRAID01130638mmu-miR-377-3pmiRNAMIMAT0000741Trim12amRNA76681Prediction0.1828
Trim12aRAID01333705mmu-miR-30d-5pmiRNAMIMAT0000515Trim12amRNA76681Prediction0.1828
Trim12aRAID01359025mmu-miR-874-3pmiRNAMIMAT0004853Trim12amRNA76681Prediction0.1828
Trim12aRAID01375669mmu-miR-449c-5pmiRNAMIMAT0003460Trim12amRNA76681Prediction0.1828
Trim12aRAID01582943mmu-miR-542-3pmiRNAMIMAT0003172Trim12amRNA76681Prediction0.1828
Trim12aRAID01929553mmu-miR-30a-5pmiRNAMIMAT0000128Trim12amRNA76681Prediction0.1828
Trim12aRAID02175768mmu-miR-485-5pmiRNAMIMAT0003128Trim12amRNA76681Prediction0.1828
Trim12aRAID02291207mmu-miR-30c-5pmiRNAMIMAT0000514Trim12amRNA76681Prediction0.1828
Trim12aRAID02300402mmu-miR-7b-5pmiRNAMIMAT0000678Trim12amRNA76681Prediction0.1828
Trim12aRAID02393420mmu-miR-449a-5pmiRNAMIMAT0001542Trim12amRNA76681Prediction0.1828
Trim12aRAID02599889mmu-miR-34b-5pmiRNAMIMAT0000382Trim12amRNA76681Prediction0.1828
Trim12aRAID02632298mmu-miR-218-5pmiRNAMIMAT0000663Trim12amRNA76681Prediction0.1828
Trim12aRAID02779013mmu-miR-34c-5pmiRNAMIMAT0000381Trim12amRNA76681Prediction0.1828
Trim12aRAID02807774mmu-miR-449bmiRNAMIMAT0005447Trim12amRNA76681Prediction0.1828
Trim12aRAID02858712mmu-miR-590-3pmiRNAMIMAT0004896Trim12amRNA76681Prediction0.1828
Trim12aRAID02990924mmu-miR-135a-5pmiRNAMIMAT0000147Trim12amRNA76681Prediction0.1828
Trim12aRAID03205826mmu-miR-7045-3pmiRNAMIMAT0027995Trim12amRNA76681Prediction0.1828
Trim12aRAID03307889mmu-miR-7a-5pmiRNAMIMAT0000677Trim12amRNA76681Prediction0.1828
Trim12aRAID03440098mmu-miR-299a-3pmiRNAMIMAT0004577Trim12amRNA76681Prediction0.1828
Trim12aRAID03602563mmu-miR-3113-3pmiRNAMIMAT0014960Trim12amRNA76681Prediction0.1828
Trim12aRAID03727436mmu-miR-181d-5pmiRNAMIMAT0004324Trim12amRNA76681Prediction0.1828
Trim12aRAID03795943mmu-miR-3078-3pmiRNAMIMAT0014865Trim12amRNA76681Prediction0.1828
Trim12aRAID03993927mmu-miR-30b-5pmiRNAMIMAT0000130Trim12amRNA76681Prediction0.1828