DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004519 mmu-let-7g* 66825 Rnf186 cguuccgucaccGGACAUGUca ::|||||| uguauauaucccUUUGUACAca 3 11 295 316 [mm9:4:138524203-138524224:+] 0.5537 122 0 -9.10 -0.1240 MIMAT0004546 mmu-miR-202-5p 66825 Rnf186 uuucuuCAUAUACGUAUCCUu ||:|| |||||||| guuccuGUGUA-GCAUAGGAa 2 16 188 207 [mm9:4:138524096-138524115:+] 0.5600 157 7 -18.21 -0.3474 MIMAT0004583 mmu-miR-130b* 66825 Rnf186 ucaUCACGUUGUCCCUUUCUCa || | || :||||||||| ggaAG-GAAAGGGGGAAAGAGa 2 20 204 224 [mm9:4:138524112-138524132:+] 0.5033 161 7 -20.31 -0.4339 MIMAT0004620 mmu-let-7a* 66825 Rnf186 ccUUUCUGUCAUCU--AACAUAUc |:|| : || : ||||||| ccAGAGCUCCUAAGUUUUGUAUAu 2 21 278 301 [mm9:4:138524186-138524209:+] 0.5537 143 7 -7.70 -0.5405 MIMAT0004621 mmu-let-7b* 66825 Rnf186 cccUUCCGUCAUCC--AACAUAUc :|| : || | ||||||| ccaGAGCUCCUAAGUUUUGUAUAu 2 20 278 301 [mm9:4:138524186-138524209:+] 0.5537 142 7 -7.08 -0.5405 MIMAT0004622 mmu-let-7c-1* 66825 Rnf186 ccuuucgaucuuccAACAUGUc ||||||| uuguauauaucccuUUGUACAc 2 9 294 315 [mm9:4:138524202-138524223:+] 0.5537 140 7 -5.51 -0.8173 MIMAT0005439 mmu-let-7c-2* 66825 Rnf186 ccUUUCUGUCAUCU--AACAUAUc |:|| : || : ||||||| ccAGAGCUCCUAAGUUUUGUAUAu 2 21 278 301 [mm9:4:138524186-138524209:+] 0.5537 143 7 -7.70 -0.5405 MIMAT0004623 mmu-let-7f* 66825 Rnf186 cccuuccguuaucuAACAUAUc ||||||| agagcuccuaaguuUUGUAUAu 2 9 280 301 [mm9:4:138524188-138524209:+] 0.5537 140 7 -6.14 -0.5441 MIMAT0004665 mmu-miR-218-1* 66825 Rnf186 ccaCGAACUGCCUUGGUACAAa || ||| | :||||||| aaaGCCAGACUG-GCCAUGUUg 2 20 125 145 [mm9:4:138524033-138524053:+] 0.6167 153 7 -16.04 -0.1653 MIMAT0000706 mmu-miR-362-5p 66825 Rnf186 uaaguGUGGAUCCAAGGUUCCUAa ||: | || | ||||||| cuggcCAUGUUGGAU-CAAGGAUu 2 20 134 156 [mm9:4:138524042-138524064:+] 0.6167 153 7 -16.86 -0.5710 MIMAT0002105 mmu-miR-464 66825 Rnf186 auagAGUGU---CUU-AUUUGAAC-CAu ||||| ||| |::||||| || aaaaUCACAUUCGAACUGGACUUGCGUg 2 20 95 122 [mm9:4:138524003-138524030:+] 0.6167 125 0 -17.18 -0.6501 MIMAT0003732 mmu-miR-668 66825 Rnf186 ccaucacccGGCUCGGCUCACUGu |:|| :||||||| agacaccccCUGA-AUGAGUGACu 2 16 227 249 [mm9:4:138524135-138524157:+] 0.5033 145 7 -17.28 -0.2301 MIMAT0003455 mmu-miR-679 66825 Rnf186 ugguucucagUGGAGUGUCAGg ||||||||||| ccucccccagACCUCACAGUCu 2 13 43 64 [mm9:4:138523951-138523972:+] 0.5491 160 7 -24.73 -0.1665 MIMAT0005839 mmu-miR-669f 66825 Rnf186 uaugcacacaCACAUACAUAUAc || | ||||||| gagcuccuaaGU-UUUGUAUAUa 2 14 281 302 [mm9:4:138524189-138524210:+] 0.5537 143 7 -5.55 -1.0235 MIMAT0009441 mmu-miR-1968 66825 Rnf186 ucAGGUGGUAGGAAUUGUC-GACGu ||| ||| | | |||| |||| ccUCCCCCAGACCUCACAGUCUGCa 2 23 43 67 [mm9:4:138523951-138523975:+] 0.5491 134 0 -23.19 -0.3354 MIMAT0011211 mmu-miR-2135 66825 Rnf186 caaAGCCGGGGUUCUGGAGa || |||| ||||||| cccUCCUCCCCCAGACCUCa 2 18 39 58 [mm9:4:138523947-138523966:+] 0.5491 161 7 -21.64 -0.1192 MIMAT0013803 mmu-miR-2861 66825 Rnf186 ggcgggcGGCGGUCCGGGg || ||||||| cuggaucCCUACAGGCCCa 2 13 6 24 [mm9:4:138523914-138523932:+] 0.5970 144 7 -22.45 -0.6977 MIMAT0014852 mmu-miR-3072* 66825 Rnf186 ggacgggagggaGCCCCAGGGa :|||||||| acucaaggguggUGGGGUCCCu 2 11 247 268 [mm9:4:138524155-138524176:+] 0.5033 146 7 -25.77 -0.3041 MIMAT0000157 mmu-miR-145 66825 Rnf186 ucccuaaggacccuUUUGACCUg :||||||| ucaaaaucacauucGAACUGGAc 2 10 93 115 [mm9:4:138524001-138524023:+] 0.6167 141 7 -14.73 -0.3625 MIMAT0000382 mmu-miR-34b-5p 66825 Rnf186 ugUUAGUCG-AUUAAUGU-GACGGa :| |||: :|| :|| ||||| ugGAACAGUGGGAUCGCACCUGCCu 2 22 163 187 [mm9:4:138524071-138524095:+] 0.6167 120 0 -18.18 -0.1980 MIMAT0000653 mmu-miR-28 66825 Rnf186 gaguuaucugacaCUCGAGGAa |||||||| uaccccuauuccaGAGCUCCUa 2 10 268 289 [mm9:4:138524176-138524197:+] 0.5285 145 7 -15.14 -0.5776 MIMAT0003450 mmu-miR-488 66825 Rnf186 cugGUUCUUUGUCGGAAAGUu | ||:::| |||||||| gggCUAGGGGCCGCCUUUCAa 2 19 76 96 [mm9:4:138523984-138524004:+] 0.6167 162 7 -25.49 -0.5303 MIMAT0004828 mmu-miR-708 66825 Rnf186 gggucgaucUAACAU-UCGAGGAa ||| | ||||||| ccuaccccuAUUCCAGAGCUCCUa 2 15 266 289 [mm9:4:138524174-138524197:+] 0.5285 145 7 -16.86 -0.5776 MIMAT0004936 mmu-miR-873 66825 Rnf186 uccucUGAGUGUUCAAGGACg || ::| ||||||| aucgcACCUGCCUGUUCCUGu 2 17 175 195 [mm9:4:138524083-138524103:+] 0.5600 148 7 -15.84 -0.2069

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G066684 Rnf186 Mus musculus 66825

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Rnf186 mmu-miR-2135 beg:39 end:58 pic:3' CAAAGCCGGGGTTCTGGAGA 5'& || |||| ||||||| &5' ---TCCTCCCCCAGACCTC- 3' Rnf186 mmu-miR-28 beg:278 end:289 pic:3' GAGTTATCTGACACTCGAGGAA 5'& |||||||| &5' -------------GAGCTCCT- 3' Rnf186 mmu-miR-679 beg:46 end:65 pic:3' TGGTTCTCAGTGGAGTGTCAGG 5'& |||. |||||||||||. &5' -CCAG-----ACCTCACAGTCT 3' Rnf186 mmu-miR-2861 beg:17 end:41 pic:3' GGCGGG---CGGCGG-TCCGGGG 5'& |||| ||.||| |||..|| &5' --GCCCAGTGCTGCCAAGGTTCC 3' Rnf186 mmu-miR-202-5p beg:191 end:208 pic:3' TTTCTTCATATACGTATCCTT 5'& ||.|| ||||||||| &5' ------GTGTA-GCATAGGAA 3' Rnf186 mmu-miR-668 beg:233 end:249 pic:3' CCATCACCCGGCTCGGCTCACTGT 5'& |.|| .||||||| &5' ---------CTGAA-TGAGTGAC- 3' Rnf186 mcmv-miR-m01-4 beg:191 end:207 pic:3' GTGCGCGTGCACAATCGTATCCT 5'& ||| |||||||||| &5' ---------GTG-TAGCATAGGA 3' Rnf186 mmu-miR-2138 beg:25 end:43 pic:3' TAAGGCGGTTCGGGCAAGGGAA 5'& |.|||||| ||||||| &5' ---CTGCCAAG---GTTCCCT- 3' Rnf186 mcmv-miR-m107-1-5p beg:234 end:250 pic:3' CCACTGAGCTCTGCTCACTGGC 5'& .|| |.|||||||. &5' -------TGA-ATGAGTGACT- 3' Rnf186 mghv-miR-M1-8 beg:275 end:298 pic:3' CTGGTTT-GGGGG-TCACTCACGA 5'& |||.| |.||. ||| ||. &5' --CCAGAGCTCCTAAGTTT-TGT- 3' Rnf186 mmu-let-7c-1star beg:279 end:301 pic:3' CCTTTCGATC-TTCC-AACATGTC 5'& |.|||| ||| |||||.| &5' --AGAGCTCCTAAGTTTTGTATA- 3' Rnf186 mmu-miR-1188 beg:39 end:61 pic:3' AGGACCGGGT-TGGAGTGTGGT 5'& |||| |||| |||||||| &5' TCCTCCCCCAGACCTCACA--- 3' Rnf186 mmu-miR-1274a beg:104 end:119 pic:3' ACCGCGGACTTGTCCCTGGACT 5'& |||| ||||.|| &5' --------GAACT-GGACTTG- 3' Rnf186 mmu-miR-130bstar beg:201 end:224 pic:3' TCATCACGTTGTCCCTTTCTCA 5'& .| || || .||||||||| &5' GGAAGGA-AAGGGGGAAAGAG- 3' Rnf186 mmu-miR-145 beg:149 end:167 pic:3' TCCCTAAGGACCCTTTTGACCTG 5'& ||||||. .||||| &5' --GGATTCTGT-----GCTGGA- 3' Rnf186 mmu-miR-149 beg:117 end:134 pic:3' CCCTCACTTCTGTGCCTCGGTCT 5'& ||| || ||||||| &5' ----GTGT---CAA--AGCCAGA 3' Rnf186 mmu-miR-1900 beg:239 end:260 pic:3' ACTTCCTGGTCTCTCCCGCCGG 5'& |||. |||. ||||.||. &5' TGAGTGACTCA--AGGGTGGT- 3' Rnf186 mmu-miR-1952 beg:201 end:219 pic:3' GTCTTCCT--CCCACCTCT 5'& .|||||| ||| ||| &5' -GGAAGGAAAGGG-GGA-- 3' Rnf186 mmu-miR-199a-5p beg:319 end:331 pic:3' CTTGTCCATCAGACTTGTGACCC 5'& |.|||.||| &5' -------------GGACATTGG- 3' Rnf186 mmu-miR-204 beg:196 end:219 pic:3' TCCGTATCCTACTGTTTCCCTT 5'& |||||||| | ||.|||.| &5' --GCATAGGAAGGAAAGGGGGA 3' Rnf186 mmu-miR-211 beg:196 end:219 pic:3' TCCGTTTCCTACTGTTTCCCTT 5'& ||| |||| | ||.|||.| &5' --GCATAGGAAGGAAAGGGGGA 3' Rnf186 mmu-miR-2132 beg:167 end:187 pic:3' GTAGCGCAGT--TGTGGGCGG 5'& |.| .||||.||| &5' ----GTGGGATCGCACCTGCC 3' Rnf186 mmu-miR-218-1star beg:125 end:145 pic:3' CCACGAACTGCCTTGGTACAAA 5'& || ||| ..||||||| &5' ---GCCAGACT-GGCCATGTT- 3' Rnf186 mmu-miR-222 beg:182 end:201 pic:3' TGGGTCATCGGTCTACATCGA 5'& .||. || || .|||||| &5' GCCT-GTT-CCT-GTGTAGC- 3' Rnf186 mmu-miR-2861 beg:340 end:362 pic:3' GGCGGG---CGGCGGTCCGGGG 5'& || | |||||.|.| &5' --GCAAATAGAA-CCAGGTCTC 3' Rnf186 mmu-miR-29bstar beg:337 end:357 pic:3' ATTTGGTGGTATACTTTGGTCG 5'& ||| || ||| .|||||| &5' -AAAGCAA-ATA--GAACCAG- 3' Rnf186 mmu-miR-326 beg:274 end:284 pic:3' TGACCTCCTTCCCGGGTCTCC 5'& .|||||| &5' -------------TCCAGAG- 3' Rnf186 mmu-miR-331-3p beg:65 end:87 pic:3' AAGATCCTA-TCCGGGTCCCCG 5'& |.|| .|| |.|||||| &5' ---TGGGTAAGGGGCTAGGGGC 3' Rnf186 mmu-miR-338-3p beg:148 end:167 pic:3' GTTGTTTTAGTGACTACGACCT 5'& |..||. ||| ||||||| &5' ----AGGATT-CTG-TGCTGGA 3' Rnf186 mmu-miR-343 beg:196 end:219 pic:3' AGACCCGTGTA----C-TTCCCTCT 5'& |||.| | |||||.|| &5' -----GCATAGGAAGGAAAGGGGGA 3' Rnf186 mmu-miR-344 beg:133 end:151 pic:3' TGTCAGTCCGAAACCGATCTAGT 5'& ||| |.|.||||| &5' -------GGCCAT-GTTGGATCA 3' Rnf186 mmu-miR-3475 beg:261 end:283 pic:3' AAGTT-TGGTACACGGAGGTCT 5'& || ||| .|||||| &5' -TCCCTACCCCTA--TTCCAGA 3' Rnf186 mmu-miR-34a beg:13 end:34 pic:3' TGTT--GGTCGATTCTGTGACGGT 5'& |||. ||||. .|||||| &5' ACAGGCCCAGT------GCTGCCA 3' Rnf186 mmu-miR-362-5p beg:136 end:157 pic:3' TAAGTGTGGATCCAAGGTTCCTAA 5'& ||. | || .|||||||| &5' -----CATGTTGGA-TCAAGGATT 3' Rnf186 mmu-miR-384-3p beg:190 end:208 pic:3' TAACAC-TTGTTAAAGATCCTTA 5'& |||| |.|| |||||| &5' --TGTGTAGCA-----TAGGAA- 3' Rnf186 mmu-miR-449a beg:19 end:34 pic:3' TGGTCGATTGTTATGTGACGGT 5'& ||||. .|||||| &5' -CCAGT---------GCTGCCA 3' Rnf186 mmu-miR-470 beg:134 end:155 pic:3' TGAGTGGTCACGGTCAGGTTCTT 5'& | .||| ||. | .||||.| &5' --TGGCCA-TGTTGGATCAAGGA 3' Rnf186 mmu-miR-488 beg:74 end:97 pic:3' CTGGTTCTTTGTCGGAAAGTT 5'& |.|. || .| ||||||||| &5' GGCT-AGGGGCCGCCTTTCAA 3' Rnf186 mmu-miR-568 beg:292 end:315 pic:3' CACACATATGTA----AATATGTA 5'& ||||||.|| ||.|||| &5' ---TGTATATATCCCTTTGTACA- 3' Rnf186 mmu-miR-666-5p beg:170 end:190 pic:3' CCGAGAGTGTCGACACGGGCGA 5'& || ||.|| | ||||.|.| &5' GGA--TCGCACC--TGCCTGTT 3' Rnf186 mmu-miR-698 beg:201 end:219 pic:3' TCCCTTCCTTTGCTCTTAC 5'& ||||||||| |.|.| &5' --GGAAGGAAAGGGGGA-- 3' Rnf186 mmu-miR-708 beg:267 end:289 pic:3' GGGTCGATCTAACATTCGAGGAA 5'& ||| ||| .||||||| &5' CCC--CTATTCCA-GAGCTCCT- 3' Rnf186 mmu-miR-760 beg:267 end:286 pic:3' AGGGGTGTCTGGGTCTCGGC 5'& |||| .|||||||. &5' -CCCCTAT--TCCAGAGCT- 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Rnf186 RAID00349853 mmu-miR-33-5p miRNA MIMAT0000667 Rnf186 mRNA 66825 Prediction 0.1828 Rnf186 RAID00426341 mmu-miR-665-3p miRNA MIMAT0003733 Rnf186 mRNA 66825 Prediction 0.1828 Rnf186 RAID00473500 mmu-miR-7117-5p miRNA MIMAT0028131 Rnf186 mRNA 66825 Prediction 0.1828 Rnf186 RAID00834911 mmu-miR-708-5p miRNA MIMAT0004828 Rnf186 mRNA 66825 Prediction 0.2202 Rnf186 RAID00835797 mmu-miR-669b-3p miRNA MIMAT0017250 Rnf186 mRNA 66825 Prediction 0.1828 Rnf186 RAID00840595 mmu-miR-6982-3p miRNA MIMAT0027867 Rnf186 mRNA 66825 Prediction 0.1828 Rnf186 RAID00934739 mmu-miR-145a-5p miRNA MIMAT0000157 Rnf186 mRNA 66825 Prediction 0.1828 Rnf186 RAID01037161 mmu-miR-511-3p miRNA MIMAT0017281 Rnf186 mRNA 66825 Prediction 0.1828 Rnf186 RAID01592709 mmu-let-7c-1-3p miRNA MIMAT0004622 Rnf186 mRNA 66825 Prediction 0.1828 Rnf186 RAID01607856 mmu-miR-34b-5p miRNA MIMAT0000382 Rnf186 mRNA 66825 Prediction 0.1828 Rnf186 RAID02340983 mmu-miR-7212-5p miRNA MIMAT0028392 Rnf186 mRNA 66825 Prediction 0.1828 Rnf186 RAID02393034 mmu-miR-873a-5p miRNA MIMAT0004936 Rnf186 mRNA 66825 Prediction 0.1828 Rnf186 RAID02407072 mmu-miR-28a-5p miRNA MIMAT0000653 Rnf186 mRNA 66825 Prediction 0.2202 Rnf186 RAID02972463 mmu-miR-669f-3p miRNA MIMAT0005839 Rnf186 mRNA 66825 Prediction 0.1828 Rnf186 RAID03044074 mmu-miR-1897-5p miRNA MIMAT0007864 Rnf186 mRNA 66825 Prediction 0.1828 Rnf186 RAID03310720 mmu-miR-467a-3p miRNA MIMAT0002108 Rnf186 mRNA 66825 Prediction 0.1828 Rnf186 RAID03698727 mmu-miR-489-3p miRNA MIMAT0003112 Rnf186 mRNA 66825 Prediction 0.1828 Rnf186 RAID03851801 mmu-miR-488-3p miRNA MIMAT0003450 Rnf186 mRNA 66825 Prediction 0.1828