DNA & RNA Element - RepTar |
Gene Name | miRNA | Begin | End | Profile |
Klhl9 | mghv-miR-M1-9 | beg:262 | end:279 | pic:3' TTTTTCCAGGTCCGTTTACACT 5'& ||. |.||||||| &5' -------TCTTAGTAAATGTG- 3' |
Klhl9 | mmu-miR-129-3p | beg:722 | end:735 | pic:3' TACGAAAAACCCCATTCCCGAA 5'& ||| ||||||| &5' --GCT---------AAGGGCT- 3' |
Klhl9 | mmu-miR-16star | beg:1231 | end:1249 | pic:3' AGTCGTCGTGTCAGTTATGACC 5'& |||. | ||||||||| &5' ----CAGT-CT-TCAATACTG- 3' |
Klhl9 | mmu-miR-136 | beg:320 | end:339 | pic:3' GGTAGTAGTTTTGT---TTACCTCA 5'& .||||| ||||||| &5' --------GAAACATTAAATGGAG- 3' |
Klhl9 | mmu-miR-1194 | beg:1507 | end:1525 | pic:3' TCCTAGATCGTCAA-TGAGTAAG 5'& ||. ||| |||||||. &5' -------AGT-GTTGACTCATTT 3' |
Klhl9 | mmu-miR-30astar | beg:312 | end:327 | pic:3' CGACGTTTGTAGGCTGACTTTC 5'& ||..|||||||| &5' ---------ATTTGACTGAAA- 3' |
Klhl9 | mmu-miR-30estar | beg:312 | end:327 | pic:3' CGACATTTGTAGGCTGACTTTC 5'& ||..|||||||| &5' ---------ATTTGACTGAAA- 3' |
Klhl9 | mmu-miR-710 | beg:586 | end:603 | pic:3' GAGTTGAGAGGGGTTCTGAACC 5'& ||||.|. ||||||| &5' ---AACTTTT----AGACTTG- 3' |
Klhl9 | mmu-miR-144 | beg:1233 | end:1251 | pic:3' TCATGTAGTAGATATGACAT 5'& .|| || |||||||. &5' -----GTCTTCAATACTGTG 3' |
Klhl9 | mmu-miR-338-5p | beg:119 | end:139 | pic:3' GTGAGTCGTGGTCCTATAACAA 5'& .| || ||||||||| &5' --TTTGGCTT---GATATTGTT 3' |
Klhl9 | mmu-miR-7astar | beg:494 | end:511 | pic:3' ATACC-GTCTGACACTAAACAAC 5'& || ||| |||||||| &5' ---GGTCAG-----GATTTGTT- 3' |
Klhl9 | mmu-miR-466d-5p | beg:1387 | end:1402 | pic:3' GTACATGTACATGCGTGTGTGT 5'& ||| |||||||| &5' ----------TACACACACACA 3' |
Klhl9 | mmu-miR-759 | beg:977 | end:989 | pic:3' CAGTTTTAACAAAC-GTGAGACG 5'& | ||||||| &5' -------------GTCACTCTG- 3' |
Klhl9 | mmu-miR-654-3p | beg:1599 | end:1618 | pic:3' TTCCACTACCAGTC---GTCTGTAT 5'& ||.| |||||||| &5' ---------GTTAACTTCAGACATA 3' |
Klhl9 | mmu-miR-3470b | beg:1409 | end:1428 | pic:3' GGTCGGACCA----GATGTCTCACT 5'& ||| . ||||||| &5' ------TGGGAGAGTGCCAGAGTG- 3' |
Klhl9 | mmu-miR-879star | beg:1500 | end:1513 | pic:3' GGCTTTCGAACTTC-GGTATTCG 5'& | |||||||. &5' -------------GCCCATAAGT 3' |
Klhl9 | mmu-miR-327 | beg:1079 | end:1093 | pic:3' TAGGAGTACGG-GGAGTTCA 5'& ||. ||||||| &5' --------GCTGCCTCAAG- 3' |
Klhl9 | mmu-miR-1943 | beg:371 | end:390 | pic:3' AGGTCCACGGGTCTA-GGAGGGAA 5'& |||| ||| ||||||| &5' ---AGGTA--CAGCTACCTCCCT- 3' |
Klhl9 | mmu-miR-145 | beg:1353 | end:1374 | pic:3' TCCCTAAGGACCCTTTTGACCTG 5'& ||||||||||||.|| | &5' -----TTCCTGGGAAAATTGTTC 3' |
Klhl9 | mmu-let-7i | beg:370 | end:387 | pic:3' TTGTCGTGTTTGATGATGGAGT 5'& .|.||| .||||||| &5' ---GGTACA----GCTACCTC- 3' |
Klhl9 | mmu-let-7d | beg:371 | end:387 | pic:3' TTGATACGTTGGATGATGGAGA 5'& |. || .||||||| &5' ------GT-ACA-GCTACCTC- 3' |
Klhl9 | mmu-let-7f | beg:371 | end:387 | pic:3' TTGATATGTTAGATGATGGAGT 5'& .|||| .||||||| &5' ----GTACA----GCTACCTC- 3' |
Klhl9 | mmu-let-7g | beg:371 | end:387 | pic:3' TTGACATGTTTGATGATGGAGT 5'& ||||| .||||||| &5' ----GTACA----GCTACCTC- 3' |
Klhl9 | mmu-miR-1961 | beg:373 | end:387 | pic:3' AAGATTGATGATGGAGT 5'& || .||||||| &5' -----ACAGCTACCTC- 3' |
Klhl9 | mmu-miR-709 | beg:1072 | end:1090 | pic:3' AGGAGGACGGA-GACGGAGG 5'& . ||. ||||||| &5' ----TGTGTGAGCTGCCTC- 3' |
Klhl9 | mmu-miR-381 | beg:47 | end:59 | pic:3' TGTCTCTCGAACGGGAACATAT 5'& ||||||||| &5' ------------CCCTTGTAT- 3' |
Klhl9 | mmu-miR-540-5p | beg:100 | end:110 | pic:3' TGTCTCAGTCTCCCACTGGGAAC 5'& ||||||| &5' ---------------GACCCTT- 3' |
Klhl9 | mmu-miR-3471 | beg:1813 | end:1830 | pic:3' TTACGGAATGTCAA---CCTAGAGT 5'& |||| ||||||| &5' ----------AGTTAGAGGATCTC- 3' |
Klhl9 | mmu-miR-362-3p | beg:527 | end:541 | pic:3' ACTTAGGAACTTGTCCACACAA 5'& ||.|||||||| &5' ----------AATAGGTGTGT- 3' |
Klhl9 | mmu-miR-329 | beg:531 | end:541 | pic:3' TTTTTCCAATCGACCCACACAA 5'& ||||||| &5' --------------GGTGTGT- 3' |
Klhl9 | mmu-miR-466g | beg:807 | end:821 | pic:3' ACACACACGTACA-CAGACATA 5'& ||| ||||||| &5' ----------TGTAGTCTGTA- 3' |
Klhl9 | mmu-miR-1197 | beg:1760 | end:1773 | pic:3' TCTTCATCTGGTACACAGGAT 5'& .|| ||||||| &5' ---------TCA-GTGTCCT- 3' |
Klhl9 | mmu-miR-411star | beg:232 | end:248 | pic:3' CCAATCACCTGGCACAATGTAT 5'& |||| ||||||||. &5' -----GTGG----TGTTACATG 3' |
Klhl9 | mcmv-miR-m01-1 | beg:50 | end:70 | pic:3' GGCAAGCTGCAATAAGAGGAGA 5'& |.| |||||||. &5' ----TTGTATTGTTTCTCCTT- 3' |
Klhl9 | mcmv-miR-m21-1 | beg:1308 | end:1330 | pic:3' GCCGAACTTGCACAGGGGATA 5'& || |||||||.|. &5' -GGAATTATAGTGTCCCTTG- 3' |
Klhl9 | mcmv-miR-m21-1 | beg:331 | end:348 | pic:3' GCCGAACTTGCACAGGGGATA 5'& ||.| | |||||||.| &5' -----TGGA-G-GTCCCCTGT 3' |
Klhl9 | mmu-let-7a | beg:962 | end:980 | pic:3' TTGATATGTTGGATGATGGAGT 5'& .| || ||.||||| &5' -------TAGTCTCCTGCCTCA 3' |
Klhl9 | mmu-let-7b | beg:1079 | end:1091 | pic:3' TTGGTGTGTTGGATGATGGAGT 5'& .||.||||| &5' -------------GCTGCCTCA 3' |
Klhl9 | mmu-let-7b | beg:366 | end:387 | pic:3' TTGGTGTGTTGGATGATGGAGT 5'& .||| || .||||||| &5' -GCCAAGGTACA-GCTACCTC- 3' |
Klhl9 | mmu-let-7b | beg:962 | end:980 | pic:3' TTGGTGTGTTGGATGATGGAGT 5'& .| || ||.||||| &5' -------TAGTCTCCTGCCTCA 3' |
Klhl9 | mmu-let-7c | beg:962 | end:980 | pic:3' TTGGTATGTTGGATGATGGAGT 5'& .| || ||.||||| &5' -------TAGTCTCCTGCCTCA 3' |
Klhl9 | mmu-let-7d | beg:1072 | end:1090 | pic:3' TTGATACGTTGGATGATGGAGA 5'& |.|| | .||.|||| &5' ---TGTGTGA---GCTGCCTC- 3' |
Klhl9 | mmu-let-7d | beg:962 | end:979 | pic:3' TTGATACGTTGGATGATGGAGA 5'& .| || ||.|||| &5' -------TAGTCTCCTGCCTC- 3' |
Klhl9 | mmu-let-7e | beg:962 | end:980 | pic:3' TTGATATGTTGGAGGATGGAGT 5'& .| |||||.||||| &5' -------TAGTCTCCTGCCTCA 3' |
Klhl9 | mmu-let-7e | beg:1072 | end:1091 | pic:3' TTGATATGTTGGAGGATGGAGT 5'& |.|. | ||.||||| &5' ---TGTGTGAG---CTGCCTCA 3' |
Klhl9 | mmu-let-7f | beg:962 | end:980 | pic:3' TTGATATGTTAGATGATGGAGT 5'& .|.||| ||.||||| &5' -------TAGTCTCCTGCCTCA 3' |
Klhl9 | mmu-let-7g | beg:1072 | end:1091 | pic:3' TTGACATGTTTGATGATGGAGT 5'& |||. | .||.||||| &5' ---TGTGTGA---GCTGCCTCA 3' |
Klhl9 | mmu-let-7g | beg:959 | end:980 | pic:3' TTGACATGTTTGATGATGGAGT 5'& || .|. || ||.||||| &5' ----GTTTAGTCTCCTGCCTCA 3' |
Klhl9 | mmu-let-7i | beg:958 | end:980 | pic:3' TTGTCGTGTTTGATGATGGAGT 5'& ||. .|. || ||.||||| &5' ---AGTTTAGTCTCCTGCCTCA 3' |
Klhl9 | mmu-miR-106a | beg:1335 | end:1358 | pic:3' GATGGAC-GTGACAAT--CGTGAAAC 5'& || .|||| |.||||| &5' -----TGATACTGAATATGTACTTT- 3' |
Klhl9 | mmu-miR-106a | beg:146 | end:167 | pic:3' GATGGACGTGACAATCGTGAAAC 5'& || .|| |||.|||| &5' ----CTATACAAGT-GCATTTTG 3' |
Klhl9 | mmu-miR-106b | beg:1539 | end:1561 | pic:3' TAGACGTGACAGTCGTGAAAT 5'& ||||||.|| ||| |.||| &5' -TCTGCATTGACAGAATTTT- 3' |
Klhl9 | mmu-miR-106b | beg:805 | end:826 | pic:3' TAGACGT--GACAGTC-GTGAAAT 5'& ||||.| ||| .|| .|| &5' -TCTGTAGTCTG-TAGTTAC---- 3' |
Klhl9 | mmu-miR-1187 | beg:1386 | end:1402 | pic:3' AATGTGTGTATGTGTGTGTGTAT 5'& ||||||||||||| &5' --------ATACACACACACA-- 3' |
Klhl9 | mmu-miR-1190 | beg:180 | end:191 | pic:3' CTGTCTCCCCTTGGAGTCGACT 5'& .||||||| &5' -------------TTCAGCTG- 3' |
Klhl9 | mmu-miR-128 | beg:1079 | end:1100 | pic:3' TTTCTCTGGCCAAG---TGACACT 5'& ||| |.| || .|||||| &5' ---GAG-CTGCCTCAAGGCTGTGA 3' |
Klhl9 | mmu-miR-128 | beg:1232 | end:1251 | pic:3' TTTCTCTGGCCAAGTGACACT 5'& || |. .||||||. &5' ----AGTCTTCAATACTGTGG 3' |
Klhl9 | mmu-miR-129-5p | beg:1150 | end:1169 | pic:3' CGTTCGGGTCTGGCGTTTTTC 5'& ||||. |||. |||||| &5' ---AGCCTTGACT-CAAAAA- 3' |
Klhl9 | mmu-miR-129-5p | beg:451 | end:470 | pic:3' CGTTCGGGTCTGGC-GTTTTTC 5'& ||.||. | ||.||| &5' -----CCTAGGTAGACAGAAA- 3' |
Klhl9 | mmu-miR-130b | beg:872 | end:895 | pic:3' TAC-GGGAAAGTAGTAACGTGAC 5'& || ...|||.|||||| ||| &5' -TGTTTTTTTTATCATTA-ACT- 3' |
Klhl9 | mmu-miR-134 | beg:1745 | end:1766 | pic:3' GGGGAGACCAGTTGGTCAGTGT 5'& ||||.||||||| |||| &5' -CCCTTTGGTCAAAT-GTCA-- 3' |
Klhl9 | mmu-miR-142-3p | beg:1625 | end:1650 | pic:3' AGGTATTTCATCCTTTGTGATGT 5'& |..| ||.|||| || .|||| &5' TTTAGAAGGTAGAAATTGCTAC- 3' |
Klhl9 | mmu-miR-147 | beg:921 | end:945 | pic:3' ATCG--TCTTCGTAAAGGCGTGTG 5'& .|| ||||||||| | ||| &5' -GGCATAGAAGCATTCTCA-ACA- 3' |
Klhl9 | mmu-miR-150 | beg:1407 | end:1417 | pic:3' GTGACCATGTTCCCAACCCTCT 5'& ||||||| &5' ---------------TGGGAGA 3' |
Klhl9 | mmu-miR-152 | beg:1539 | end:1552 | pic:3' GGTTCAAGACAGTACGTGACT 5'& || ||||.||| &5' ----------TC-TGCATTGA 3' |
Klhl9 | mmu-miR-154 | beg:334 | end:357 | pic:3' GCTTCCGTTGTGCCT-ATTGGAT 5'& |.|||. | .| ||||||| &5' -GGAGGTCCCCTGTTCTAACCTA 3' |
Klhl9 | mmu-miR-154star | beg:412 | end:432 | pic:3' TTATCCAG-TTGGCACATACTAA 5'& ||| |. | |||.||||| &5' -----GTCTAGGC-TGTGTGATT 3' |
Klhl9 | mmu-miR-155 | beg:1531 | end:1552 | pic:3' TGGGGATAGTGTTAAT--CGTAATT 5'& ||| ||| |||||.| &5' -------TCATGATTTCTGCATTGA 3' |
Klhl9 | mmu-miR-15a | beg:1416 | end:1434 | pic:3' GTGTTTGGTAATACACGACGAT 5'& .||| ||||||.|. &5' -----GCCAGA--GTGCTGTTG 3' |
Klhl9 | mmu-miR-15b | beg:1414 | end:1434 | pic:3' ACATTTGGTACTACACGACGAT 5'& || .||| || ||||||.|. &5' -GT--GCCA-GA-GTGCTGTTG 3' |
Klhl9 | mmu-miR-16 | beg:1416 | end:1434 | pic:3' GCGGTTATAAATGCACGACGAT 5'& ||||. ||||||.|. &5' -GCCAGA------GTGCTGTTG 3' |
Klhl9 | mmu-miR-16star | beg:1326 | end:1346 | pic:3' AGTCGTCGTG--TCAGTTATGACC 5'& .|.| ||| .|||||| &5' -----GGTAATGAGT-GATACTG- 3' |
Klhl9 | mmu-miR-1839-5p | beg:1247 | end:1267 | pic:3' GTTCTGGACAAGATAGATGGAA 5'& ..|| || |||.||| &5' -GGGAATA---CTTTCTGCCT- 3' |
Klhl9 | mmu-miR-185 | beg:1682 | end:1697 | pic:3' AGTCCTTGACGGAAAGAGAGGT 5'& ||| ||.|.||| &5' -------CTGA--TTTTTTCC- 3' |
Klhl9 | mmu-miR-1897-5p | beg:628 | end:650 | pic:3' GGGGGAGA-AAGAGGTAGGTTTC 5'& ||.| ||.||. ||||.| &5' --CCTTATATTTTCT-TCCAGA- 3' |
Klhl9 | mmu-miR-1898 | beg:1143 | end:1163 | pic:3' CTAGGGGACACTTGGAACTGGA 5'& ||.| | |.|||||||. &5' ----CCTTTTTAGCCTTGACT- 3' |
Klhl9 | mmu-miR-18a | beg:146 | end:167 | pic:3' GATAGACGTGATCTACGTGGAAT 5'& || .|| || ||||..||. &5' ----CTATACAAG-TGCATTTTG 3' |
Klhl9 | mmu-miR-190b | beg:1796 | end:1816 | pic:3' TTGGGTTATAGTTTGTATAGT 5'& | |.|. ||||||| &5' ----CTTTGTTTTTCATATCA 3' |
Klhl9 | mmu-miR-1929 | beg:1402 | end:1415 | pic:3' GAGACGAGATATTTCAGGATCTT 5'& ||||||.|.| &5' -------------AGTCCTGGGA 3' |
Klhl9 | mmu-miR-1929 | beg:1341 | end:1365 | pic:3' GAGACGAG-ATATTTCAGGATCTT 5'& ||| |.|| ||||.|.| &5' --CTGAATATGTACTTTCCTGGGA 3' |
Klhl9 | mmu-miR-1929 | beg:418 | end:442 | pic:3' GAGACGAGATATT--TCAGGATCTT 5'& ||| |.|.| ||||.||||| &5' ----GCTGTGTGATTAGTCTTAGAA 3' |
Klhl9 | mmu-miR-1929 | beg:443 | end:460 | pic:3' GAGACGAGATATTTC--AGGATCTT 5'& |.||| ||||||. &5' ----------TGAAGTTTCCTAGG- 3' |
Klhl9 | mmu-miR-1930 | beg:318 | end:341 | pic:3' TGC-GACGTCCATGA-TACCTCCA 5'& | ||| |||||||| &5' --GACTGAAACATTAAATGGAGGT 3' |
Klhl9 | mmu-miR-1948 | beg:1245 | end:1270 | pic:3' GACATGCTCAC--GAGACGGATTT 5'& ||||. || .|||||||.|. &5' CTGTGGGAATACTTTCTGCCTGAG 3' |
Klhl9 | mmu-miR-1953 | beg:1340 | end:1361 | pic:3' GTCTTCGGACTCT----TGAAAGGGT 5'& |||| |||||||. &5' -------CTGAATATGTACTTTCCT- 3' |
Klhl9 | mmu-miR-1953 | beg:435 | end:458 | pic:3' GTCTTCGGACTCTTGAAAGGGT 5'& .|||| ||| |||||.| &5' TAGAATATTT-GAAGTTTCCTA 3' |
Klhl9 | mmu-miR-1954 | beg:798 | end:823 | pic:3' TTGTCCCAGAG---TGAGACGTCA 5'& .|| |.|| | ||||.||| &5' --TAGTTTTTCTGTAGTCTGTAGT 3' |
Klhl9 | mmu-miR-1957 | beg:630 | end:648 | pic:3' CAGTATACGAGATGGTGAC 5'& |.|||| .||| ||| &5' -TTATATTTTCTTCCA--- 3' |
Klhl9 | mmu-miR-1958 | beg:1339 | end:1362 | pic:3' TGAATGACGA--AGGTGAAAGGAT 5'& ||||| | .||||||||. &5' ---TACTGAATATGTACTTTCCTG 3' |
Klhl9 | mmu-miR-1958 | beg:1676 | end:1698 | pic:3' TGAATGACGAAGGT----GAAAGGAT 5'& |.||| ||| .|||||| &5' ----ATTGCATCCTGATTTTTTCCT- 3' |
Klhl9 | mmu-miR-1958 | beg:1763 | end:1779 | pic:3' TGAATGACGAAGGTGAAAGGAT 5'& |. ||| .|||||| &5' -------GTGTCC-TTTTCCT- 3' |
Klhl9 | mmu-miR-1961 | beg:1079 | end:1091 | pic:3' AAGATTGATGATGGAGT 5'& .||.||||| &5' --------GCTGCCTCA 3' |
Klhl9 | mmu-miR-1961 | beg:960 | end:980 | pic:3' AAGATT-GATGATGGAGT 5'& |.||. || ||.||||| &5' -TTTAGTCTCCTGCCTCA 3' |
Klhl9 | mmu-miR-196a | beg:366 | end:386 | pic:3' GGGTTGT-TGTACTTTGATGGAT 5'& |||| . ||| .|||||| &5' -CCAAGGTACA----GCTACCT- 3' |
Klhl9 | mmu-miR-196b | beg:369 | end:386 | pic:3' GGGTTGTTGTCCT--TTGATGGAT 5'& ||| |.|||||| &5' ---------AGGTACAGCTACCT- 3' |
Klhl9 | mmu-miR-1970 | beg:1321 | end:1344 | pic:3' GTTTCGGATAGGGG--------TCACTGTGT 5'& .||||. |||||.|| &5' --------GTCCCTTGGTAATGAGTGATAC- 3' |
Klhl9 | mmu-miR-1971 | beg:1255 | end:1276 | pic:3' AGAGTCGGG-TCGGAAATG 5'& |.|| |||. || |||| &5' TTTCTGCCTGAGAA-TTAC 3' |
Klhl9 | mmu-miR-202-5p | beg:1264 | end:1283 | pic:3' TTTCTTCATATACGTATCCTT 5'& .|||| || |||.|||| &5' -GAGAATTA----CATGGGAA 3' |
Klhl9 | mmu-miR-208a | beg:418 | end:439 | pic:3' TGTTCGAAAAACGAG---CAGAATA 5'& |.||| ||. |||||| &5' --AGGCTG--TGTGATTAGTCTTA- 3' |
Klhl9 | mmu-miR-2136 | beg:1389 | end:1407 | pic:3' GTGTAGAGTCAGT-TGTGGGTC 5'& |||| || |||||.|| &5' CACA-------CACACACCTAG 3' |
Klhl9 | mmu-miR-2140 | beg:1113 | end:1132 | pic:3' TGGTGGTTCTAGACGTGGA 5'& |||| | ||||||.| &5' --CACCCTGTTCTGCATC- 3' |
Klhl9 | mmu-miR-2141 | beg:376 | end:388 | pic:3' TTGAAAAGACTGTGGAGGA 5'& | .|||||| &5' ---------GCTACCTCC- 3' |
Klhl9 | mmu-miR-219 | beg:1419 | end:1440 | pic:3' TCTTAACG-CAAACCTGTTAGT 5'& |||. ||| ||| ||||.|| &5' AGAG-TGCTGTT--GACAGTC- 3' |
Klhl9 | mmu-miR-219 | beg:390 | end:411 | pic:3' TCTTAACGCAAACCTGTTAGT 5'& |.|| |. ||||||||||| &5' -GGATAGT-TTTGGACAATC- 3' |
Klhl9 | mmu-miR-21star | beg:1416 | end:1434 | pic:3' CTGTCGGGTAGCTGACGACAAC 5'& ||| || |||||||| &5' ----GCCA---GAGTGCTGTTG 3' |
Klhl9 | mmu-miR-26a | beg:430 | end:450 | pic:3' TCGGATAGGACCTAATGAACTT 5'& .||.| || ||.||||| &5' -----GTCTTAGAATATTTGAA 3' |
Klhl9 | mmu-miR-27a | beg:1078 | end:1100 | pic:3' CGCCTTGAATCGG-----TGACACTT 5'& ||.|| ||| .|||||| &5' ---GAGCT--GCCTCAAGGCTGTGA- 3' |
Klhl9 | mmu-miR-27a | beg:1235 | end:1253 | pic:3' CGCCTTGAATCGGTGACACTT 5'& ||| .||||||.. &5' ------CTTCAATACTGTGGG 3' |
Klhl9 | mmu-miR-27a | beg:888 | end:907 | pic:3' CGCCTTGAATCGGTGACACTT 5'& ||||| | ||||||| &5' ----AACTTTTAC-CTGTGAA 3' |
Klhl9 | mmu-miR-27a | beg:1763 | end:1784 | pic:3' CGC-CTTGAATCGGTGACACTT 5'& | | ||| || .||||| &5' --GTGTCCTTTTCC-TTGTGA- 3' |
Klhl9 | mmu-miR-27b | beg:1231 | end:1253 | pic:3' CGTCTTGAATCGGTGACACTT 5'& ||| ||| .||||||.. &5' -CAGT-CTTCAATACTGTGGG 3' |
Klhl9 | mmu-miR-27b | beg:888 | end:907 | pic:3' CGTCTTGAATCGGTGACACTT 5'& ||||| | ||||||| &5' ----AACTTTTAC-CTGTGAA 3' |
Klhl9 | mmu-miR-291b-3p | beg:140 | end:166 | pic:3' TGTTTGTTTTACC--------TACGTGAAA 5'& |||||| .||||.||| &5' -------AAATGGCTATACAAGTGCATTTT 3' |
Klhl9 | mmu-miR-29a | beg:1033 | end:1051 | pic:3' ATTGGCTAAAGTCTACCACGAT 5'& |||. |||||||. &5' -------TTTTTTTTGGTGCTG 3' |
Klhl9 | mmu-miR-29b | beg:1033 | end:1051 | pic:3' TTGTGACTAAAGTTTACCACGAT 5'& |||. |||||||. &5' --------TTTTTTTTGGTGCTG 3' |
Klhl9 | mmu-miR-29bstar | beg:1159 | end:1179 | pic:3' ATTTGGTGG-TATACTTTGGTCG 5'& .|| ||| .||||||| &5' ----TCAAAAATA--GAACCAGC 3' |
Klhl9 | mmu-miR-29c | beg:1033 | end:1051 | pic:3' ATTGGCTAAAGTTTACCACGAT 5'& |||. |||||||. &5' -------TTTTTTTTGGTGCTG 3' |
Klhl9 | mmu-miR-300star | beg:1225 | end:1244 | pic:3' TGTTTCCTATTGGAG---AGAAGTT 5'& .||||. ||||||| &5' ---------GACCTTCAGTCTTCAA 3' |
Klhl9 | mmu-miR-302c | beg:918 | end:938 | pic:3' GGTGACTT-TGTACCTTCGTGAA 5'& ||| .||| ||||||.| &5' -----GAAGGCATAGAAGCATT- 3' |
Klhl9 | mmu-miR-3099 | beg:1144 | end:1158 | pic:3' AGGGGTTGGAGAGAGATCGGAT 5'& ||.|.|||||| &5' ----------CTTTTTAGCCT- 3' |
Klhl9 | mmu-miR-30astar | beg:1257 | end:1271 | pic:3' CGACGTTTGTAGGCTGACTTTC 5'& ||.| ||||.| &5' ----------TCTGCCTGAGA- 3' |
Klhl9 | mmu-miR-30astar | beg:1367 | end:1383 | pic:3' CGACGTTTGTAGGCTGACTTTC 5'& .|.| ||||||.| &5' ---------GTTCAACTGAAGG 3' |
Klhl9 | mmu-miR-30c-2star | beg:626 | end:649 | pic:3' TCTCATTTGTCGGAAGAGGGTC 5'& || |.| ..||||.|||| &5' -GACCTTATA-TTTTCTTCCAG 3' |
Klhl9 | mmu-miR-30estar | beg:1367 | end:1383 | pic:3' CGACATTTGTAGGCTGACTTTC 5'& .|.| ||||||.| &5' ---------GTTCAACTGAAGG 3' |
Klhl9 | mmu-miR-30estar | beg:1249 | end:1271 | pic:3' CGACATTTGT---AGGCTGACTTTC 5'& | ||.| ||.| ||||.| &5' ---GGGAATACTTTCTGCCTGAGA- 3' |
Klhl9 | mmu-miR-32 | beg:263 | end:283 | pic:3' ACGTTGAATCA-TTACACGTTAT 5'& |||||| ||||||.||| &5' -----CTTAGTAAATGTGTAAT- 3' |
Klhl9 | mmu-miR-323-3p | beg:1056 | end:1079 | pic:3' TCTCCAGCT---GGCACATTACAC 5'& ||| || ||||||||| &5' ---GGTAAGCATCC-TGTAATGTG 3' |
Klhl9 | mmu-miR-324-3p | beg:1199 | end:1220 | pic:3' TCGTCGTGGACC---------CCGTCACC 5'& |||| ||||||| &5' --------CTGGTTTCTTTAAGGCAGTG- 3' |
Klhl9 | mmu-miR-328 | beg:718 | end:736 | pic:3' TGCCTTCCCGTCTCTCCCGGTC 5'& || || |||||.| &5' ---GATA-GCTA--AGGGCTA- 3' |
Klhl9 | mmu-miR-330star | beg:1783 | end:1805 | pic:3' AGAGACGTCCGGGACACGAAACG 5'& |||.| || |||||||. &5' TCTTTT--GGAGT--TGCTTTGT 3' |
Klhl9 | mmu-miR-331-5p | beg:981 | end:998 | pic:3' CCTAGGGACCCTGGTATGGATC 5'& |.||| |||.|||| &5' ----CTCTGA---CATGCCTA- 3' |
Klhl9 | mmu-miR-338-5p | beg:41 | end:63 | pic:3' GTGAGTCGTGGTCCTATAACAA 5'& .||| | || .||||||| &5' --TTCATCCCCTT-GTATTGTT 3' |
Klhl9 | mmu-miR-33 | beg:1440 | end:1463 | pic:3' ACGTTACGTTGA---TGTTACGTG 5'& .||||.||.| |||| |. &5' --TAATGTAATTCAGACAAAGT-- 3' |
Klhl9 | mmu-miR-3470a | beg:1444 | end:1465 | pic:3' GGTCGGACCAGATGTTTCACT 5'& |. ||||||||| &5' ---GTAATTCAGACAAAGTGA 3' |
Klhl9 | mmu-miR-3475 | beg:627 | end:650 | pic:3' AAGTTTGGTACAC----GGAGGTCT 5'& .||| |.|||||| &5' ----GACCTTATATTTTCTTCCAGA 3' |
Klhl9 | mmu-miR-361 | beg:1042 | end:1064 | pic:3' CATGGGGACCTCTAA-GACTATT 5'& ||.|. |||.| |||.||| &5' GTGCT----GAGGTAGCTGGTAA 3' |
Klhl9 | mmu-miR-367 | beg:2 | end:15 | pic:3' AGTGGTAACGATTTCACGTTAA 5'& ||.|||.||| &5' -----------AAGGTGTAAT- 3' |
Klhl9 | mmu-miR-377 | beg:402 | end:431 | pic:3' TGTTTT-CAACGGAA---ACACACTA 5'& |||| ||||.|| |||||||| &5' ACAATCTGTTGTCTAGGCTGTGTGAT 3' |
Klhl9 | mmu-miR-380-3p | beg:1820 | end:1838 | pic:3' TTCTACACCTGGTATGATGTAT 5'& |||.| .||.||| &5' -------GGATCTCTTTATATA 3' |
Klhl9 | mmu-miR-381 | beg:1642 | end:1662 | pic:3' TGTCTCTCGAACG--GGAACATAT 5'& ||| |.||||.|| &5' -------GCTACTAACTTTGTGTA 3' |
Klhl9 | mmu-miR-384-5p | beg:128 | end:154 | pic:3' TGTAACGGATCCTTAACAAATGT 5'& |.||||..||| || || ||.| &5' ATATTGTTTAGTAAATGGCTATA 3' |
Klhl9 | mmu-miR-411star | beg:1820 | end:1838 | pic:3' CCAATCACCTGGCACAATGTAT 5'& |||.| |||.||| &5' -------GGATCTCTTTATATA 3' |
Klhl9 | mmu-miR-411star | beg:808 | end:828 | pic:3' CCAATCACCTGGCA-CAATGTAT 5'& || | |.|| |||||||. &5' -----GTAGTCTGTAGTTACATG 3' |
Klhl9 | mmu-miR-421 | beg:1414 | end:1435 | pic:3' CGCGGGTTAATTACAGACAACTA 5'& |.||| |.|| ||||||| &5' GTGCCAG---AGTG-CTGTTGA- 3' |
Klhl9 | mmu-miR-429 | beg:156 | end:177 | pic:3' TGC-CGTAATGGTCTGTCATAAT 5'& | ||||| ||||||| &5' --GTGCATTTTGAAA-AGTATTA 3' |
Klhl9 | mmu-miR-432 | beg:935 | end:956 | pic:3' GACGGGTGACTAGATGAGGTTCT 5'& |.|| .|||||.|| &5' ---CTCAACAAA--GCTCCAGGA 3' |
Klhl9 | mmu-miR-450a-3p | beg:918 | end:943 | pic:3' TACTTACGT---TTCGTAGGGGTTA 5'& ||| ||| ||||||.|.||| &5' --GAAGGCATAGAAGCATTCTCAA- 3' |
Klhl9 | mmu-miR-464 | beg:1312 | end:1333 | pic:3' ATAGAGTGTCTTATTTGAACCAT 5'& |.|.|| ||||||| &5' ----TTATAGTGTCC-CTTGGTA 3' |
Klhl9 | mmu-miR-466k | beg:573 | end:589 | pic:3' AGTGTACATGTACATGTGTGTGT 5'& .||||||||||.| &5' ----------GTGTACACACATA 3' |
Klhl9 | mmu-miR-467b | beg:820 | end:837 | pic:3' GTATATGTACGTCCGTGAATG 5'& ||||||| .|.||| &5' ----TACATGCT--TATTTA- 3' |
Klhl9 | mmu-miR-470 | beg:935 | end:956 | pic:3' TGAGTGGTCACGGTCAGGTTCTT 5'& |||| || || ||||.|| &5' -CTCAACAAAGC---TCCAGGA- 3' |
Klhl9 | mmu-miR-488 | beg:0 | end:25 | pic:3' CTGGTTCT---TTGTCGGAAAGTT 5'& |||||. ||.| |.|||||. &5' --CCAAGGTGTAATACCTTTTCAG 3' |
Klhl9 | mmu-miR-488 | beg:1513 | end:1537 | pic:3' CTG-GTTCTTTGTCGGAAAGTT 5'& ||| || ||.||||| &5' GACTCATTTTAATGCTTTTCA- 3' |
Klhl9 | mmu-miR-493 | beg:1214 | end:1236 | pic:3' GGACCGTGTG-TCATCCTGGAAGT 5'& | | |||| |||||||| &5' ----GTGCTAAAGTA-GACCTTCA 3' |
Klhl9 | mmu-miR-493 | beg:571 | end:597 | pic:3' GGAC-CGTGTGTCATCCTGGAAGT 5'& .|| |.||||| ||.||.| &5' -TTGTGTACACACATAAACTTTTA 3' |
Klhl9 | mmu-miR-497 | beg:1417 | end:1434 | pic:3' ATGTTTGGTGTCACACGACGAC 5'& | ||| ||||||.|| &5' -------C-CAGAGTGCTGTTG 3' |
Klhl9 | mmu-miR-499 | beg:691 | end:711 | pic:3' TTTGTAGTGACGTTCAGAATT 5'& |.| || ||||||||| &5' ---CGTGTCTA-AAGTCTTAA 3' |
Klhl9 | mmu-miR-505 | beg:1416 | end:1436 | pic:3' TCTTTTGGTCGTTC-ACAACTGC 5'& .|||| | ||||||| &5' -----GCCAGAGTGCTGTTGAC- 3' |
Klhl9 | mmu-miR-505 | beg:1502 | end:1519 | pic:3' TCTTTTGGTCGTTCACAACTGC 5'& ||| .|||||||||| &5' ------CCA-TAAGTGTTGAC- 3' |
Klhl9 | mmu-miR-509-5p | beg:1775 | end:1797 | pic:3' TACTAACGGTGTA--AGACCTCAT 5'& |||. |.|| |.|||||| &5' ----TTGTGATATCTTTTGGAGT- 3' |
Klhl9 | mmu-miR-532-5p | beg:909 | end:929 | pic:3' TGCCAGGATGTGAGTTCCGTAC 5'& ||| .| ||||||| &5' -CGGGAGT-TAAGGAAGGCAT- 3' |
Klhl9 | mmu-miR-539 | beg:48 | end:68 | pic:3' TGTGTGGTTCCTATTAAAGAGG 5'& || | || .||||||| &5' -----CCTTGTATTGTTTCTCC 3' |
Klhl9 | mmu-miR-542-3p | beg:275 | end:296 | pic:3' AAAGTCAATAGT-TAGACAGTGT 5'& || ||.| .|||||.|.| &5' -----GTAATTATGTCTGTTATA 3' |
Klhl9 | mmu-miR-544 | beg:825 | end:843 | pic:3' CTCGAACGATTTTTACGTCTTA 5'& |||| |||||| &5' -----TGCTTATTTAGCAGAA- 3' |
Klhl9 | mmu-miR-574-5p | beg:1386 | end:1401 | pic:3' TGTGTGAGTGTGTGTGTGTGAGT 5'& .|||||||||||| &5' -------TACACACACACAC--- 3' |
Klhl9 | mmu-miR-665 | beg:375 | end:395 | pic:3' TCCCTGGAGTCGGAGGACCA 5'& || ||||| ||||.||| &5' AGCTACCTC--CCTCTTGG- 3' |
Klhl9 | mmu-miR-669n | beg:1386 | end:1402 | pic:3' TGTGTGTAGGTGTGTGTTTA 5'& |.||||| ||||||| &5' ATACACA--CACACAC---- 3' |
Klhl9 | mmu-miR-669n | beg:577 | end:599 | pic:3' TGTGTGTAGGTGTGTGTTTA 5'& |||||||| || .|.| &5' ACACACATAAACTTTTAGA- 3' |
Klhl9 | mmu-miR-673-3p | beg:1393 | end:1413 | pic:3' CCACGTGTCTTGAGTCGGGGCCT 5'& |||| || .||.||.||. &5' ----CACAC-ACCTAGTCCTGGG 3' |
Klhl9 | mmu-miR-674 | beg:13 | end:28 | pic:3' ATGTGGTGAGGGTAGAGTCACG 5'& || |.||||||. &5' ----------CCTTTTCAGTGT 3' |
Klhl9 | mmu-miR-677 | beg:500 | end:522 | pic:3' AGTCTTCGATTAGT-AGTGACTT 5'& ||.| .|. || ||||||.| &5' --AGGATTTGTTCTCTCACTGGA 3' |
Klhl9 | mmu-miR-684 | beg:1266 | end:1286 | pic:3' AACTGAACTT-CCCTTTTGA 5'& || |||||||. &5' --GAATTACATGGGAAAAT- 3' |
Klhl9 | mmu-miR-684 | beg:1347 | end:1370 | pic:3' AAC-TGAACTT-CCCTTTTGA 5'& || |||| |||||||.| &5' -TGTACTTTCCTGGGAAAATT 3' |
Klhl9 | mmu-miR-693-3p | beg:1078 | end:1098 | pic:3' AATGTCGGTGTAGACTTTCGACG 5'& ||| | || ||.||||. &5' ----AGCTGCCTC--AAGGCTGT 3' |
Klhl9 | mmu-miR-693-5p | beg:1561 | end:1581 | pic:3' CTTTTGAAA-GCCTACACCGAC 5'& ||||| .| |||||.| &5' ----ACTTTGTGTGTGTGGTT- 3' |
Klhl9 | mmu-miR-704 | beg:234 | end:252 | pic:3' GATCCTCGTCTCGTGTACAGA 5'& || |. ||..|||| &5' ---GGTGTTA--CATGTGTC- 3' |
Klhl9 | mmu-miR-706 | beg:1189 | end:1211 | pic:3' AAAAAAC-TCTGTC--CCAAAGAGA 5'& | || ||| |||||||.| &5' ------GAAGTCAGCTGGTTTCTTT 3' |
Klhl9 | mmu-miR-706 | beg:1790 | end:1810 | pic:3' AAAAAACTC--TGTCCCAAAGAGA 5'& ||| .| ||||.|| &5' ------GAGTTGCTTTGTTTTTC- 3' |
Klhl9 | mmu-miR-706 | beg:1563 | end:1586 | pic:3' AAAAAACTCTGTC-CCAAAGAGA 5'& |||| | | |||||.|.| &5' ---TTTGTGTGTGTGGTTTTTTT 3' |
Klhl9 | mmu-miR-713 | beg:5 | end:29 | pic:3' CGACACAC---GGA--AGTCACGT 5'& |||| ||| ||||||.| &5' ---GTGTAATACCTTTTCAGTGTA 3' |
Klhl9 | mmu-miR-741 | beg:1816 | end:1832 | pic:3' AGATGTATCTTACCGTAGAGAGT 5'& |||| || ||||||. &5' ------TAGA--GG-ATCTCTT- 3' |
Klhl9 | mmu-miR-741 | beg:498 | end:517 | pic:3' AGATGTATCTTACCGTAGAGAGT 5'& ||.|| ||||||| &5' -------AGGATTTGTTCTCTCA 3' |
Klhl9 | mmu-miR-743a | beg:1795 | end:1810 | pic:3' AGATGAGTCGAACCACAGAAAG 5'& |||| |||.|||| &5' --------GCTT--TGTTTTTC 3' |
Klhl9 | mmu-miR-743b-3p | beg:1795 | end:1810 | pic:3' AGATAAGTCGTACTACAGAAAG 5'& || |||.|||| &5' --------GCTT--TGTTTTTC 3' |
Klhl9 | mmu-miR-743b-5p | beg:1089 | end:1108 | pic:3' ACTACCTGTGGTCAGACTTGT 5'& |.| . |||||.|| &5' -----GGCTGTGATCTGAGCA 3' |
Klhl9 | mmu-miR-743b-5p | beg:1470 | end:1491 | pic:3' ACTACCTGTGGTC--AGACTTGT 5'& || | | ||||||| &5' ----GGCTTCTGGCTTCTGAAC- 3' |
Klhl9 | mmu-miR-763 | beg:180 | end:191 | pic:3' CGGTGACCAAGAAGGGTCGACC 5'& ..|||||| &5' -------------TTCAGCTG- 3' |
Klhl9 | mmu-miR-7a | beg:633 | end:648 | pic:3' TGTTGTTTTAGTGATCAGAAGGT 5'& .|.| ||||||| &5' ----------TATTT-TCTTCCA 3' |
Klhl9 | mmu-miR-7b | beg:630 | end:648 | pic:3' TGTTGTTTTAGTGTTC-AGAAGGT 5'& |.|.| ||||||| &5' ---------TTATATTTTCTTCCA 3' |
Klhl9 | mmu-miR-871 | beg:1326 | end:1350 | pic:3' GTACTGACCGTG----ATTA-GACTTAT 5'& .|||.| |.|| ||||||| &5' -----TTGGTAATGAGTGATACTGAATA 3' |
Klhl9 | mmu-miR-871 | beg:1532 | end:1558 | pic:3' GTACTGAC--CGTGATTAGACTTAT 5'& |||||.| |||.|.| | |||| &5' CATGATTTCTGCATTGA-CAGAAT- 3' |
Klhl9 | mmu-miR-872 | beg:1098 | end:1120 | pic:3' GGACTTGATTGTTCAT-TGGAA 5'& ||||.| ||||. || ||| &5' -CTGAGCAAACAGATACACC-- 3' |
Klhl9 | mmu-miR-9 | beg:670 | end:691 | pic:3' AGTATGTCGATCTAT-TGGTTTCT 5'& || ||||.||| &5' ------AGAATTCAATACCAGAGA 3' |
Klhl9 | mmu-miR-9 | beg:840 | end:858 | pic:3' AGTATGTCGATCTATTGGTTTCT 5'& ||| || .|||||| &5' ------AGCAAGTT--TCAAAGA 3' |
Klhl9 | mmu-miR-96 | beg:1211 | end:1225 | pic:3' TCGTTTTTACACGATCACGGTTT 5'& || |||||.||| &5' -----------GC-AGTGCTAAA 3' |
Klhl9 | mmu-miR-98 | beg:1079 | end:1091 | pic:3' TTGTTATGTTGAATGATGGAGT 5'& .||.||||| &5' -------------GCTGCCTCA 3' |
Klhl9 | mmu-miR-98 | beg:969 | end:980 | pic:3' TTGTTATGTTGAATGATGGAGT 5'& ||.||||| &5' --------------CTGCCTCA 3' |
Klhl9 | mmu-miR-183star | beg:1436 | end:1455 | pic:3' AATACCGGGAAGC-CATTAAGTG 5'& | ||||| |||||||| &5' ----GTCCCTTAATGTAATTCA- 3' |
Klhl9 | mcmv-miR-m21-1 | beg:1174 | end:1191 | pic:3' GCCGAACTTGCACAGGGGATA 5'& ||| .| ||||||| &5' --GCTCAGA----TCCCCTA- 3' |
Klhl9 | mmu-miR-1894-3p | beg:1312 | end:1330 | pic:3' GAGGGAAGTGGGAGAGGGAACG 5'& |.|. | ||||||| &5' ------TTATAGTGTCCCTTG- 3' |