DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT015528 mmu-miR-9-5p Mus musculus Ccnf 12449 Mus musculus Sequencing Functional MTI (Weak) 19536157 MIRT008296 mmu-miR-541-5p Mus musculus Ccnf 12449 Mus musculus Sequencing Functional MTI (Weak) 19536157

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004521 mmu-miR-15b* 12449 Ccnf aucucgucGUUUAUUACUAAGc :| || :|||||| aaaauauuUAUAUUGUGAUUCa 2 15 1298 1319 [mm9:17:24375413-24375434:-] 0.5002 134 6 -5.84 -0.2074 MIMAT0004535 mmu-miR-150* 12449 Ccnf gaUAGGGGGU-CCGGAC-AUGGUc || |:|| ||:|| ||||| agAUGGCUCAUCGCUUGCUACCAa 2 21 856 879 [mm9:17:24375853-24375876:-] 0.5001 123 0 -15.77 -0.2908 MIMAT0004540 mmu-miR-186* 12449 Ccnf ggguuuuuuaaguGGAAUCCCg |||||||| guacuguguagauCCUUAGGGg 2 10 80 101 [mm9:17:24360742-24360763:-] 0.4223 145 7 -14.97 -0.1325 MIMAT0004540 mmu-miR-186* 12449 Ccnf ggguuuuuuaagUGGAAUCCCg | ||||||| ------acggggAACUUAGGGa 2 11 1 16 [mm9:17:24376716-24376731:-] 0.5022 142 7 -15.03 -0.3884 MIMAT0004544 mmu-miR-193* 12449 Ccnf aguagaACGGGCGUUUCUGGGu ||::: :||||||| ucugaaUGUUUAAGAAGACCCc 2 17 305 326 [mm9:17:24376406-24376427:-] 0.5052 148 7 -15.70 -0.4167 MIMAT0004545 mmu-miR-200b* 12449 Ccnf aggUUACGACGGGUCAUUCUAc ||||:| ::|||||||| gaaAAUGUU-AUUAGUAAGAUg 2 20 840 860 [mm9:17:24375872-24375892:-] 0.5061 161 7 -20.06 -0.3893 MIMAT0004572 mmu-miR-290-3p 12449 Ccnf cccgaAUUUUGAUCCGCCGUGAAa |::|::|| ||||||| ggaagUGGAGUUA-CAGGCACUUg 2 20 165 187 [mm9:17:24376545-24376567:-] 0.5003 149 7 -17.56 -0.1392 MIMAT0000370 mmu-miR-292-3p 12449 Ccnf ugugaguUUUGGACCGCCGUGAAa ::| :| ||||||| uggaaguGGAGUUACAGGCACUUg 2 18 164 187 [mm9:17:24376545-24376568:-] 0.5003 141 7 -13.54 -0.1419 MIMAT0004579 mmu-miR-302a* 12449 Ccnf cguUCAUGUUGGUGCAAAUUCa ||| | : |:||||||| gguAGUUCUG-AAUGUUUAAGa 2 20 299 319 [mm9:17:24376413-24376433:-] 0.5052 149 7 -11.84 -0.7324 MIMAT0004617 mmu-miR-148a* 12449 Ccnf ucagccUCACAGAGUCUUGAAa | | |: ||||||| uugccaACUAUUAGAGAACUUg 2 17 585 606 [mm9:17:24376126-24376147:-] 0.4991 144 7 -6.81 -0.1789 MIMAT0004619 mmu-miR-200a* 12449 Ccnf agGUC-GUGACA--GGCCAUUCUAc ||| | ||| :: ||||||| uaCAGAAAAUGUUAUUAGUAAGAUg 2 21 836 860 [mm9:17:24375872-24375896:-] 0.5061 146 7 -18.63 -0.3954 MIMAT0004626 mmu-miR-18a* 12449 Ccnf gucuUCCUCGUGAAUCCCGUCa :||||: | ||||||| acuuGGGAGU-C-AAGGGCAGg 2 19 49 68 [mm9:17:24368051-24368070:-] 0.5002 146 7 -20.59 -0.4822 MIMAT0004628 mmu-miR-21* 12449 Ccnf cugucggguagCUGACGACAAc |:|||||||| uacugagggagGGCUGCUGUUu 2 12 38 59 [mm9:17:24360784-24360805:-] 0.5001 151 7 -16.00 -0.1019 MIMAT0004630 mmu-miR-26b* 12449 Ccnf cucGGUUC--AUUACCUCUUGUCc ||| | || |||||||| agaCCAUGCCUACGUGAGAACAGa 2 20 444 467 [mm9:17:24376265-24376288:-] 0.5126 150 7 -15.21 -0.1836 MIMAT0004631 mmu-miR-29a* 12449 Ccnf gacUUGUGGUUUUCUUUAGUCa :|: | ||| ||||||| uguGAUUCAAAACAAAAUCAGa 2 20 1311 1332 [mm9:17:24375400-24375421:-] 0.5002 155 7 -13.54 -1.0498 MIMAT0004636 mmu-miR-93* 12449 Ccnf gcCCUUCACGAUCGAGU-CGUCa || | || |:||| |||| cuGGCCUUACUCGUUCAGGCAGg 2 21 527 549 [mm9:17:24376183-24376205:-] 0.5023 120 0 -14.31 -0.6272 MIMAT0000549 mmu-miR-322* 12449 Ccnf cacaacgucGCGAAGUACAAa | :|||||||| uuggcuaccCCUUUCAUGUUc 2 13 1032 1052 [mm9:17:24375680-24375700:-] 0.5007 148 7 -10.52 -0.2965 MIMAT0004638 mmu-miR-323-5p 12449 Ccnf cgcuugCGCGGUGCCUGGUGGa || || |||||||| cuuauaGCACCCAGGACCACCa 2 17 1158 1179 [mm9:17:24375553-24375574:-] 0.5007 156 7 -22.97 -0.1366 MIMAT0000569 mmu-miR-330* 12449 Ccnf agAGACGUCCGGGACACGAAACg || || :|| ||||||| uuUCAGCUAAUCC--UGCUUUGc 2 22 568 588 [mm9:17:24376144-24376164:-] 0.4991 146 7 -17.67 -0.1063 MIMAT0000578 mmu-miR-337-3p 12449 Ccnf uccguaguauAUCCUCGACUu || ||||||| gguccgggacUA-GAGCUGAg 2 12 29 48 [mm9:17:24376684-24376703:-] 0.5022 141 7 -13.66 -0.2416 MIMAT0004647 mmu-miR-338-5p 12449 Ccnf guGAGUCGUGGUCCUAUAACAa ||:: || ||| ||||||| cuCUUGUCA-CAGAAUAUUGUg 2 21 790 810 [mm9:17:24375922-24375942:-] 0.5121 162 7 -13.13 -0.3430 MIMAT0004647 mmu-miR-338-5p 12449 Ccnf gugagucgugguccUAUAACAa ||||||| cuccaaaaauauuuAUAUUGUg 2 9 1293 1314 [mm9:17:24375418-24375439:-] 0.5002 140 7 -5.12 -0.9770 MIMAT0004660 mmu-miR-19a* 12449 Ccnf caucaCGUUGAUACGUUUUGAu |:::| | |||||||| accugGUGGCGA-GCAAAACUu 2 18 22 42 [mm9:17:24373980-24374000:-] 0.4693 151 7 -13.83 -0.1107 MIMAT0004660 mmu-miR-19a* 12449 Ccnf caUCACGUUGAUACGUUUUGau | ||::|:| |||||| auAUUGUGAUU---CAAAACaa 3 21 1307 1325 [mm9:17:24375407-24375425:-] 0.5002 128 0 -7.49 -0.1091 MIMAT0000742 mmu-miR-378* 12449 Ccnf uguGUCCUGGACCUCAGUCCUc ||| :| | ||||||| guuCAGUGCAAGCUGUCAGGAc 2 20 103 124 [mm9:17:24360719-24360740:-] 0.5711 151 7 -17.20 -0.2459 MIMAT0000745 mmu-miR-380-3p 12449 Ccnf uucuacaccugguauGAUGUAu |||||| ugccugucuuuauuuCUACAUu 2 8 577 598 [mm9:17:24360245-24360266:-] 0.5565 120 6 -8.65 -0.1074 MIMAT0003388 mmu-miR-376b* 12449 Ccnf auugGUAUCUUCC--UUAUAGGUg |||:|| || :||||||| accgCAUGGAUGGUAGAUAUCCAa 2 19 717 740 [mm9:17:24375992-24376015:-] 0.5121 161 7 -19.02 -0.2793 MIMAT0001094 mmu-miR-412 12449 Ccnf gccgaucacCUGGUCCACUu |: ||||||| gggagucaaGGGCAGGUGAa 2 12 53 72 [mm9:17:24368047-24368066:-] 0.5002 143 7 -19.20 -0.4019 MIMAT0001637 mmu-miR-452 12449 Ccnf cagagucaaaGGAGAC-GUUUGu |||:|| ||||| gaucuucaccCCUUUGACAAACc 2 13 1265 1287 [mm9:17:24375445-24375467:-] 0.5007 120 0 -14.25 -0.6456 MIMAT0003409 mmu-miR-467a 12449 Ccnf gcgUAUAUGUACGUCCGUGAAu :|: | | ||||||||| gaaGUGGAGUUACAGGCACUUg 2 20 166 187 [mm9:17:24376545-24376566:-] 0.5003 155 7 -17.88 -0.1405 MIMAT0002111 mmu-miR-470 12449 Ccnf ugaGUGGUCACGGUCAGGUUCUu | ::|| | | ||||||| cugCUUUAGAACAAAUCCAAGAc 2 21 648 670 [mm9:17:24376062-24376084:-] 0.5059 152 7 -12.64 -0.5388 MIMAT0005295 mmu-miR-376c* 12449 Ccnf auuUGUAUCUUCC--UUAUAGGUg :|||:|| || :||||||| accGCAUGGAUGGUAGAUAUCCAa 2 20 717 740 [mm9:17:24375992-24376015:-] 0.5121 162 7 -18.92 -0.2793 MIMAT0003376 mmu-miR-302c 12449 Ccnf gguGACUUUGUACCU-UCGUGAa || ||::: || |||||| gcuCUCAAGUGAAGACAGCACUc 2 20 369 391 [mm9:17:24360452-24360474:-] 0.5460 123 6 -12.75 -0.1761 MIMAT0004820 mmu-miR-744* 12449 Ccnf uccaacuccaaucaCCGUUGUc ||||||| auuaccugucccugGGCAACAg 2 9 45 66 [mm9:17:24373956-24373977:-] 0.4948 140 7 -14.79 -0.1391 MIMAT0003728 mmu-miR-374* 12449 Ccnf gagCCUGUUACUAUUAU-GUUGg ||| || | |||| |||| guaGGA-AAGAAAAAUAUCAACa 2 20 752 773 [mm9:17:24375959-24375980:-] 0.5121 121 0 -8.19 -0.7426 MIMAT0003733 mmu-miR-665 12449 Ccnf ucccuGGAGUCG-GAGGACCa | |::|| ||||||| guauuCAUUGGCUCUCCUGGa 2 16 147 167 [mm9:17:24376565-24376585:-] 0.5003 150 7 -18.21 -0.4316 MIMAT0003892 mmu-miR-762 12449 Ccnf cgagacaGGGCC-GG-GGUCGGGg || || || ||||||| auagcacCCAGGACCACCAGCCCa 2 16 1161 1184 [mm9:17:24375548-24375571:-] 0.5007 149 7 -29.20 -0.2803 MIMAT0003894 mmu-miR-764-5p 12449 Ccnf uccUCC-UGUACACUC-GUGg ||| || |||||| ||| uacAGGCACUUGUGAGCCACc 2 17 176 196 [mm9:17:24376536-24376556:-] 0.5003 127 0 -20.71 -0.1182 MIMAT0014815 mmu-miR-3099* 12449 Ccnf guUCCC--GACCUUCCUUCGACc :||| || |:|||||||| acGGGGAACU-UAGGGAAGCUGu 2 20 1 22 [mm9:17:24376710-24376731:-] 0.5022 152 7 -22.70 -0.1776 MIMAT0004823 mmu-miR-666-3p 12449 Ccnf ucgUCCGCUAGUGCGAC-GUCGg |||| | | |||| |||| cugAGGCCAGGA-GCUGACAGCc 2 20 268 289 [mm9:17:24360554-24360575:-] 0.5460 121 0 -20.89 -0.1492 MIMAT0003739 mmu-miR-673-5p 12449 Ccnf gagGUUCCU--GGUC---UCGACACUc |::||| ::|| |||||||| --aCGGGGAACUUAGGGAAGCUGUGAg 2 20 1 25 [mm9:17:24376707-24376731:-] 0.5022 149 7 -26.58 -0.1143 MIMAT0003740 mmu-miR-674 12449 Ccnf auGUGGUGAGGGUAGAGUCACg || || |: | ||||||| guCAGGACACUGAGCUCAGUGa 2 21 117 138 [mm9:17:24360705-24360726:-] 0.5711 156 7 -17.53 -0.2350 MIMAT0003740 mmu-miR-674 12449 Ccnf augUGGUGAGGGUAGAGUCACg :|| ||: |||||||| guaGCCUCUUAAUUCUCAGUGc 2 20 376 397 [mm9:17:24376335-24376356:-] 0.5052 155 7 -23.17 -0.3727 MIMAT0003741 mmu-miR-674* 12449 Ccnf aacaagacucuaccCUCGACAc ||||||| -----gaccuucaaGAGCUGUg 2 9 1 17 [mm9:17:24374005-24374021:-] 0.5558 140 7 -14.64 -0.3981 MIMAT0003451 mmu-miR-677 12449 Ccnf agucuucgAUUAGUAGUGACUu |: |||||||||| cccuuucaUGUUCAUCACUGAa 2 15 1040 1061 [mm9:17:24375671-24375692:-] 0.5007 158 7 -17.11 -0.3946 MIMAT0003457 mmu-miR-680 12449 Ccnf ggGGGUACAGUC--GUCUACGGg ||:| || || |||||||| ugCCUACGUGAGAACAGAUGCCa 2 20 450 472 [mm9:17:24376260-24376282:-] 0.5126 162 7 -24.29 -0.2680 MIMAT0003457 mmu-miR-680 12449 Ccnf ggggGUACAGUCGUCU-ACGGg ||| |: ||||| |||| aagaCAUCUUUGCAGAUUGCCa 2 18 666 687 [mm9:17:24376045-24376066:-] 0.5121 129 0 -16.10 -0.6117 MIMAT0004189 mmu-miR-693-3p 12449 Ccnf aaUGUCGGUGU-AGACUUUC-GACg | :||:||| ||||| ||| ccAGGGCUACACAGAGAAAGUCUGu 2 22 120 144 [mm9:17:24367975-24367999:-] 0.5000 120 0 -16.77 -0.2064 MIMAT0003495 mmu-miR-705 12449 Ccnf acggGUGGGGUGGAGGGUGg |||:|: |||||||| acagCACUCU-CCUCCCACa 2 17 383 401 [mm9:17:24360442-24360460:-] 0.4818 158 7 -27.25 -0.2837 MIMAT0003496 mmu-miR-706 12449 Ccnf aaAAA--ACUCUGUCC------CAAAGAGa ||| ||||: ||| ||||||| ugUUUACUGAGGGAGGGCUGCUGUUUCUCu 2 21 34 63 [mm9:17:24360780-24360809:-] 0.5001 146 7 -21.64 -0.1312 MIMAT0003496 mmu-miR-706 12449 Ccnf aaaaaACU-CU-GUCCCAAA-GAGa ||| || ||| |||| ||| aagccUGAUGACCAGAGUUUGCUCu 2 18 878 902 [mm9:17:24375830-24375854:-] 0.5000 123 0 -14.05 -0.1168 MIMAT0003498 mmu-miR-708* 12449 Ccnf gaucUUCGAGUGUCAG-AUCAAc | || |: |||| ||||| ucgcAUGCACGGAGUCUUAGUUa 2 19 945 967 [mm9:17:24375765-24375787:-] 0.5003 126 0 -13.28 -0.1468 MIMAT0003502 mmu-miR-712 12449 Ccnf ccauggcgggcccACUUCCUc ||||||| ucauguucaucacUGAAGGAa 2 9 1045 1065 [mm9:17:24375667-24375687:-] 0.5007 140 7 -12.61 -0.3584 MIMAT0003504 mmu-miR-713 12449 Ccnf cgacaCACGGAAGUCACGu | | |||||||| cuuagGGGAGUUCAGUGCa 2 15 94 112 [mm9:17:24360731-24360749:-] 0.5711 146 7 -15.21 -0.8109 MIMAT0003504 mmu-miR-713 12449 Ccnf cgacacacggaAGUCACGu ||||||| ccucuuaauucUCAGUGCu 2 9 380 398 [mm9:17:24376334-24376352:-] 0.5052 140 7 -11.33 -0.2053 MIMAT0003506 mmu-miR-715 12449 Ccnf gugcgcccccacACGUGCCUc |||||||| ugacugcucgcaUGCACGGAg 2 10 938 958 [mm9:17:24375774-24375794:-] 0.5000 145 7 -20.61 -0.2227 MIMAT0003514 mmu-miR-718 12449 Ccnf gcuGUGGGCCGGCCCG-CCUUc :||:|| :| ||| |||| ccuUACUCGUUCAGGCAGGAAa 2 19 531 552 [mm9:17:24376180-24376201:-] 0.5023 126 0 -19.05 -0.3656 MIMAT0003781 mmu-miR-676* 12449 Ccnf cgUUCAGGAUUCCAACA-UCUCa | || ||||| ||| |||| ucAUGU-CUAAGACUGUCAGAGg 2 21 812 833 [mm9:17:24375899-24375920:-] 0.5121 126 0 -16.08 -0.7764 MIMAT0004238 mmu-miR-743a 12449 Ccnf agaUGAGUCGAAC-CACAGAAAg |:|| :||| ||||||| gccAUUC--UUUGCCUGUCUUUa 2 20 568 588 [mm9:17:24360255-24360275:-] 0.5262 147 7 -11.26 -0.7565 MIMAT0004840 mmu-miR-743b-3p 12449 Ccnf agaUAAGUCGUAC-UACAGAAAg |||| : || ||||||| gccAUUC--UUUGCCUGUCUUUa 2 20 568 588 [mm9:17:24360255-24360275:-] 0.5262 143 7 -10.16 -0.7565 MIMAT0004841 mmu-miR-871 12449 Ccnf guaCUGACCGUGAUUAGACUUAu | :|||:| | ||||||| ggaGUUUGGUAGU--UCUGAAUg 2 21 292 312 [mm9:17:24376420-24376440:-] 0.5052 153 7 -16.24 -0.4793 MIMAT0004846 mmu-miR-881 12449 Ccnf agauaagucuuuucUGUGUCAa ||||||| gcccagguggccuaACACAGUu 2 9 307 328 [mm9:17:24360515-24360536:-] 0.5460 140 7 -13.88 -0.3206 MIMAT0004850 mmu-miR-883b-5p 12449 Ccnf acugacGAUGGGUAAGAGUCAu || :: ||||||||| gguagcCUCUUAAUUCUCAGUg 2 17 375 396 [mm9:17:24376336-24376357:-] 0.5052 156 7 -17.99 -0.2610 MIMAT0004856 mmu-miR-105 12449 Ccnf ugguguucgUAGACUCGUGAACc ||| |||||||| acaccuuuaAUCCCAGCACUUGg 2 15 32 54 [mm9:17:24368065-24368087:-] 0.5002 154 7 -22.42 -0.1644 MIMAT0004883 mmu-miR-466g 12449 Ccnf acacACACGUACACAGACAUa | ||| | |||||||| uacaUAUGC-U-UGUCUGUAu 2 18 85 103 [mm9:17:24376629-24376647:-] 0.5003 149 7 -14.64 -0.4718 MIMAT0004884 mmu-miR-466h 12449 Ccnf auguGUGUUCGUG-UACGUGUGu ::| : ||| |||||||| cugcUGCUGUCACAAUGCACACc 2 19 397 419 [mm9:17:24376313-24376335:-] 0.5052 153 7 -15.60 -0.4012 MIMAT0004888 mmu-miR-493 12449 Ccnf ggaccgugugucaucCUGGAAGu ||||||| ---------------GACCUUCa 2 9 1 8 [mm9:17:24374014-24374021:-] 0.5558 140 7 -14.18 -0.1479 MIMAT0004890 mmu-miR-509-5p 12449 Ccnf uacuaacgguguaaGACCUCAu ||||||| ugaggcccuuaaagCUGGAGUu 2 9 464 485 [mm9:17:24360358-24360379:-] 0.4719 140 7 -17.05 -0.1739 MIMAT0004938 mmu-miR-875-3p 12449 Ccnf guaucggagucAUAAAAGUCc |:||||||| ucuuuuuauuuUGUUUUCAGu 2 11 49 69 [mm9:17:24376663-24376683:-] 0.5013 146 7 -8.48 -0.7308 MIMAT0005291 mmu-miR-582-5p 12449 Ccnf ucaUUGACCAACUUGUU-GACAu ||||| || |||| |||| accAACUGAUU--ACAAUCUGUg 2 20 78 98 [mm9:17:24373924-24373944:-] 0.4975 128 0 -13.49 -0.4111 MIMAT0005292 mmu-miR-582-3p 12449 Ccnf aacccaagucaacaAGUUGUCc ||||||| aggaaagaaaaauaUCAACAGa 2 9 754 775 [mm9:17:24375957-24375978:-] 0.5121 140 7 -9.62 -0.9543 MIMAT0005830 mmu-miR-466l 12449 Ccnf uuauaCACACGUACAUAAAUAu || | :| ||||||| uuucaGUUUUUACUUAUUUAUa 2 18 63 84 [mm9:17:24376648-24376669:-] 0.5003 149 7 -4.32 -1.1407 MIMAT0005830 mmu-miR-466l 12449 Ccnf uuAUACACACGUACAUAAAUAu ||| | | ||||||| ucUAUCUCCAAAAAUAUUUAUa 2 21 1288 1309 [mm9:17:24375423-24375444:-] 0.5004 144 7 -4.56 -1.1654 MIMAT0005832 mmu-miR-669g 12449 Ccnf uagUACAGUUGUG-UA-UGUUACGu :|| :: ::| :| ||||||| ucaGUGCUGCUGCUGUCACAAUGCa 2 21 391 415 [mm9:17:24376317-24376341:-] 0.5052 142 7 -14.58 -0.2443 MIMAT0005832 mmu-miR-669g 12449 Ccnf uaguacaguuGUGUAUGU-UACGu :|:||||| |||| uuuacuuauuUAUAUACAUAUGCu 2 14 71 94 [mm9:17:24376638-24376661:-] 0.5003 121 0 -10.55 -0.8682 MIMAT0005832 mmu-miR-669g 12449 Ccnf uaGUACAGUUGUG--UAUGU-UACGu |||| | ||:: : ||| |||| acCAUGCCUACGUGAGAACAGAUGCc 2 22 446 471 [mm9:17:24376261-24376286:-] 0.5126 120 0 -12.44 -0.1991 MIMAT0005836 mmu-miR-1186 12449 Ccnf guacggaaAUUAAGGUCGUGAg |:| ||||||| cucucaagUGAAGACAGCACUc 2 15 370 391 [mm9:17:24360452-24360473:-] 0.5460 142 7 -16.36 -0.2076 MIMAT0005848 mmu-miR-466j 12449 Ccnf aauguguguAC-GUG-UACGUGUGu || ||| |||||||| ugcugcugcUGUCACAAUGCACACc 2 15 395 419 [mm9:17:24376313-24376337:-] 0.5052 152 7 -17.97 -0.4012 MIMAT0005849 mmu-miR-1191 12449 Ccnf auCCCGAUGUAU-CAUUCUGAc | |:| |||: ||||||| uuGUGUU-CAUGUCUAAGACUg 2 20 806 826 [mm9:17:24375906-24375926:-] 0.5121 148 7 -15.01 -0.2388 MIMAT0005858 mmu-miR-1197 12449 Ccnf ucuucaucugguACACAGGAu |||||||| ugucuacccuucUGUGUCCUg 2 10 206 226 [mm9:17:24360617-24360637:-] 0.5460 145 7 -17.22 -0.4905 MIMAT0007864 mmu-miR-1897-5p 12449 Ccnf gggggagaaAGAGGUAGGUUUc ||| : |||||| ugacaaaccUCUAUCUCCAAAa 2 14 1279 1300 [mm9:17:24375432-24375453:-] 0.5004 121 6 -18.32 -0.1903 MIMAT0007872 mmu-miR-1906 12449 Ccnf ucgggacGGAGUC-CGACGACGu :||||| |||||||| ucuuaauUCUCAGUGCUGCUGCu 2 16 382 404 [mm9:17:24376328-24376350:-] 0.5052 162 7 -26.61 -0.1312 MIMAT0007872 mmu-miR-1906 12449 Ccnf ucgggAC-GGAGUCCGACGA-CGu || |||| | ||||| || aaagaUGUCCUCUGACUGCUCGCa 2 18 926 949 [mm9:17:24375783-24375806:-] 0.5000 124 0 -21.25 -0.2925 MIMAT0007876 mmu-miR-1907 12449 Ccnf uggaggUCUAGGAGAC-GACGAg | :||||||| ||||| caaaagAUGUCCUCUGACUGCUc 2 17 924 946 [mm9:17:24375786-24375808:-] 0.5000 132 0 -24.59 -0.1002 MIMAT0007878 mmu-miR-1894-3p 12449 Ccnf gagGGAAGUGGG---AGA-GGGAACg :||| :||| ||| |||||| uuaUCUUAGCCCAUUUCUACCCUUGc 2 20 340 365 [mm9:17:24376367-24376392:-] 0.5052 126 6 -24.82 -0.3596 MIMAT0009390 mmu-miR-1927 12449 Ccnf aguCAGGGAUUGUAGGUCUCCAg |||: :|| :||||||| cauGUCUAAGACUGUCAGAGGUu 2 21 813 835 [mm9:17:24375897-24375919:-] 0.5121 156 7 -21.19 -0.7344 MIMAT0009396 mmu-miR-1933-5p 12449 Ccnf uuUGAUUCUGGCUUGUGGUACUGa :| : ||: |||:||||||| uuGCGGUGAUGAAACGCCAUGACc 2 23 977 1000 [mm9:17:24375732-24375755:-] 0.5007 162 7 -21.01 -0.1797 MIMAT0009397 mmu-miR-1933-3p 12449 Ccnf uauCAG-UGUGACUAC-CAGGACc ||| || || || |||||| ccuGUCUACCCUUCUGUGUCCUGu 2 20 204 227 [mm9:17:24360616-24360639:-] 0.5460 126 6 -16.39 -0.2402 MIMAT0009397 mmu-miR-1933-3p 12449 Ccnf uaucAGUGUGACUACCAGGACc ||| || |||||||||| aauaUCA-ACAGAUGGUCCUGg 2 19 764 784 [mm9:17:24375948-24375968:-] 0.5121 168 7 -26.61 -0.3906 MIMAT0009405 mmu-miR-1941-5p 12449 Ccnf uucGGAGAC---AUGGUCGUAGAGGga |||:|| ||| :|||||| accCCUUUGACAAACCUCUAUCUCCaa 3 22 1272 1298 [mm9:17:24375434-24375460:-] 0.5004 136 0 -23.06 -0.1306 MIMAT0009407 mmu-miR-1942 12449 Ccnf guUGGUCUACUUCUG-UAGACu |||| ||| || ||||| uuACCAACUGAUUACAAUCUGu 2 20 76 97 [mm9:17:24373925-24373946:-] 0.4975 127 0 -15.55 -0.6159 MIMAT0009414 mmu-miR-1937b 12449 Ccnf acccccgAGCAGGCCCUa || ||||||| ccuguugUC-UCCGGGAg 2 12 223 239 [mm9:17:24360604-24360620:-] 0.5460 141 7 -15.17 -0.1223 MIMAT0009414 mmu-miR-1937b 12449 Ccnf acCCCCGAGCAGGCCCUa | | :| |||||||| guGAGAUUGGUCCGGGAc 2 17 21 38 [mm9:17:24376694-24376711:-] 0.5022 152 7 -18.70 -0.1261 MIMAT0009417 mmu-miR-1950 12449 Ccnf acugguauaggaauCUACGUCu ||||||| uggaggcacgagcuGAUGCAGa 2 9 1093 1114 [mm9:17:24375618-24375639:-] 0.5007 140 7 -15.80 -0.1581 MIMAT0009429 mmu-miR-1937c 12449 Ccnf accccCGAGA-AGGCCCUa |:| | ||||||| guccuGUUGUCUCCGGGAg 2 14 221 239 [mm9:17:24360604-24360622:-] 0.5460 144 7 -15.17 -0.1320 MIMAT0009429 mmu-miR-1937c 12449 Ccnf acCCCCGAGAAGGCCCUa | | :| ||||||| guGAGAUUGGUCCGGGAc 2 17 21 38 [mm9:17:24376694-24376711:-] 0.5022 144 7 -14.72 -0.1261 MIMAT0009430 mmu-miR-1957 12449 Ccnf caGUAUACGAGAUGG-UGAc ||| ||||:|||| ||| gcCAU-UGCUUUACCAACUg 2 18 67 85 [mm9:17:24373937-24373955:-] 0.4975 131 0 -21.14 -0.9399 MIMAT0009431 mmu-miR-1958 12449 Ccnf ugaaugacgaaggUGAAAGGAu :||||||| gugagaucaguaaGCUUUCCUa 2 10 232 253 [mm9:17:24376479-24376500:-] 0.5003 141 7 -12.69 -0.4944 MIMAT0009435 mmu-miR-1962 12449 Ccnf uaCACAGGGUCACGGUCGGAGa ||| |||| :||||||| caGUG-ACCAG-CUCAGCCUCu 2 21 133 152 [mm9:17:24360691-24360710:-] 0.5711 152 7 -26.86 -0.2152 MIMAT0009435 mmu-miR-1962 12449 Ccnf uacacagggUC-ACGGUCGGAGa || || ||||||| gaggccaggAGCUGACAGCCUCc 2 14 270 292 [mm9:17:24360551-24360573:-] 0.5460 148 7 -20.66 -0.2601 MIMAT0009455 mmu-miR-1983 12449 Ccnf ucUUUUGUACGAGGUCCACUc :|: || | ||||||| ggGAGUCAAG-GGCAGGUGAa 2 20 53 72 [mm9:17:24368047-24368066:-] 0.5002 141 7 -14.04 -0.4050 MIMAT0009459 mmu-miR-1982* 12449 Ccnf ggAGGGGUCCUGGGAGGGUu ||||: | |||||||| caUCCCU--GUCCCUCCCAa 2 19 491 508 [mm9:17:24360335-24360352:-] 0.5262 155 7 -27.27 -0.5284 MIMAT0009459 mmu-miR-1982* 12449 Ccnf ggagggGUCCUG---GGAGGGUu ||| || ||||||| ugaagaCAGCACUCUCCUCCCAc 2 15 378 400 [mm9:17:24360443-24360465:-] 0.4818 145 7 -17.71 -0.3132 MIMAT0011214 mmu-miR-2138 12449 Ccnf uaaggcGGUUCGGGCAAGGGAa |: ||||:||||||| ggcuuaCUCAGCCUGUUCCCUu 2 17 1139 1160 [mm9:17:24375572-24375593:-] 0.5007 164 7 -26.21 -0.2891 MIMAT0011217 mmu-miR-2141 12449 Ccnf uugaaaaGACUGU-GGAGGa |||||| ||||| ccaggagCUGACAGCCUCCu 2 13 274 293 [mm9:17:24360550-24360569:-] 0.5460 124 0 -21.78 -0.1203 MIMAT0011222 mmu-miR-2146 12449 Ccnf guguaccuugggaAGAGGUg |||||| ugacaaaccucuaUCUCCAa 2 8 1279 1298 [mm9:17:24375434-24375453:-] 0.5004 120 6 -16.04 -0.1434 MIMAT0012771 mmu-miR-432 12449 Ccnf gaCGGGUGACUAGAUGAG-GUUCu | ||| ||: :||| |||| uaGACCAGUGGGGAGCUCUCAAGu 2 22 355 378 [mm9:17:24360465-24360488:-] 0.5460 121 0 -19.20 -0.1626 MIMAT0012771 mmu-miR-432 12449 Ccnf gacgggugacuAGAU-GAGGUUcu |||| |||||| uuugacaaaccUCUAUCUCCAAaa 3 13 1277 1300 [mm9:17:24375432-24375455:-] 0.5004 131 0 -14.13 -0.1755 MIMAT0012771 mmu-miR-432 12449 Ccnf gaCGGGUGACUAGAUGA-GGUUCu ||:||: | | |:|| ||||| ugGCUCAUCGCU-UGCUACCAAGc 2 22 859 881 [mm9:17:24375851-24375873:-] 0.5001 127 0 -18.93 -0.1243 MIMAT0015640 mmu-miR-3470a 12449 Ccnf ggucGGAC-CAGA-UGUUUCACu |||| || ||||||| caucCCUGUCCCUCCCAAAGUGg 2 18 491 513 [mm9:17:24360330-24360352:-] 0.5262 143 7 -16.45 -0.1092 MIMAT0015644 mmu-miR-1186b 12449 Ccnf caCCACGUACGGAAAUUAGGGu || ||| ||||||||||| guGGCGCACACCUUUAAUCCCa 2 21 25 46 [mm9:17:24368073-24368094:-] 0.5002 176 7 -30.38 -0.4703 MIMAT0000128 mmu-miR-30a 12449 Ccnf gaAGGUCA-GCU-CCUACAAAUGu |:|| | :|: | |||||||| ccUUCACUAUGGUGAAUGUUUACu 2 21 18 41 [mm9:17:24360802-24360825:-] 0.5001 154 7 -15.49 -0.2729 MIMAT0000130 mmu-miR-30b 12449 Ccnf ucgacucACAUCCUACAAAUGu || | |||||||| uucacuaUGGUGAAUGUUUACu 2 16 20 41 [mm9:17:24360802-24360823:-] 0.5001 151 7 -11.91 -0.2682 MIMAT0000148 mmu-miR-136 12449 Ccnf gguAGUAGUUUUG---UUUACCUCa ||:|: |::| |||||||| uacUCGUUCAGGCAGGAAAUGGAGa 2 20 534 558 [mm9:17:24376174-24376198:-] 0.5023 154 7 -17.49 -0.7404 MIMAT0000148 mmu-miR-136 12449 Ccnf ggUA-GUAGUUUUGUUUACC-UCa || || || ||||||| || auAUCCAACAUCUCAAAUGGUAGg 2 21 733 756 [mm9:17:24375976-24375999:-] 0.5121 123 0 -19.16 -0.7596 MIMAT0000153 mmu-miR-141 12449 Ccnf ggUAGAAAUGGUCU-GUCACAAu :|| |: || | ||||||| guGUCCCUG-CAUAUCAGUGUUg 2 21 423 444 [mm9:17:24360399-24360420:-] 0.4176 145 7 -14.88 -0.2316 MIMAT0000159 mmu-miR-149 12449 Ccnf cccuCACUUCUGUGCCUCG-GUCu || |:||||| |||| ||| agcuGUCAGGACACUGAGCUCAGu 2 20 113 136 [mm9:17:24360707-24360730:-] 0.5711 139 0 -22.64 -0.1236 MIMAT0000160 mmu-miR-150 12449 Ccnf gugaccauGUUCCCAACCCUCu ||: ||||||| uuuaauccCAGCACUUGGGAGu 2 15 37 58 [mm9:17:24368061-24368082:-] 0.5002 142 7 -13.50 -0.1794 MIMAT0000162 mmu-miR-152 12449 Ccnf gguucaAGACAGUACGUGACu | | || ||||||| ugaccgUAUCUC-UGCACUGa 2 16 540 559 [mm9:17:24360284-24360303:-] 0.5262 145 7 -18.02 -0.7377 MIMAT0000210 mmu-miR-181a 12449 Ccnf ugaGUGGCUGUCGCAACUUACAa | :: || :| ||||||| uagCCUUCACUAUGGUGAAUGUu 2 21 15 37 [mm9:17:24360806-24360828:-] 0.5001 148 7 -14.08 -0.1319 MIMAT0000210 mmu-miR-181a 12449 Ccnf ugaguGGCUGUCGCAACUUACAa ::|::||: ||||||| ggaguUUGGUAGUUCUGAAUGUu 2 19 292 314 [mm9:17:24376418-24376440:-] 0.5052 154 7 -16.89 -0.3516 MIMAT0000211 mmu-miR-182 12449 Ccnf gccacacUCAAGAUGGUAACGGUUu | | ||:|: ||||||| uucagcuAAUCCUGCU-UUGCCAAc 2 19 569 592 [mm9:17:24376140-24376163:-] 0.4991 152 7 -13.09 -0.3960 MIMAT0000215 mmu-miR-186 12449 Ccnf ucggguuUUCCUCUUAAGAAAc |||| ||||||| gaauuucAAGG-CCAUUCUUUg 2 16 558 578 [mm9:17:24360265-24360285:-] 0.5262 145 7 -13.00 -0.1884 MIMAT0000219 mmu-miR-24 12449 Ccnf gacaaggACGACUUGAC-UCGGu ||:|| |||| |||| auaucagUGUUG-ACUGUAGCCu 2 16 433 454 [mm9:17:24360389-24360410:-] 0.4176 121 0 -17.98 -0.2245 MIMAT0000225 mmu-miR-195 12449 Ccnf cggUUAUA-AAGACAC-GACGAu || || | || || ||||| caaAAGAUGUCCUCUGACUGCUc 2 19 924 946 [mm9:17:24375786-24375808:-] 0.5000 121 0 -12.40 -0.1002 MIMAT0000248 mmu-miR-30e 12449 Ccnf gaAGGUCA-GUU-CCUACAAAUGu |:|| | ::: | |||||||| ccUUCACUAUGGUGAAUGUUUACu 2 21 18 41 [mm9:17:24360802-24360825:-] 0.5001 150 7 -12.23 -0.2682 MIMAT0000381 mmu-miR-34c 12449 Ccnf cguuagucGAUUGAUGUGACGGa |||: |||||||| cuguuucuCUAG-GACACUGCCu 2 16 54 75 [mm9:17:24360768-24360789:-] 0.3868 149 7 -20.39 -0.1125 MIMAT0000382 mmu-miR-34b-5p 12449 Ccnf uguuagucGAUUAAUGUGACGGa |||: |||||||| cuguuucuCUAG-GACACUGCCu 2 16 54 75 [mm9:17:24360768-24360789:-] 0.3868 149 7 -19.52 -0.1125 MIMAT0000514 mmu-miR-30c 12449 Ccnf cgacucucACAUCCUACAAAUGu || | |||||||| cuucacuaUGGUGAAUGUUUACu 2 16 19 41 [mm9:17:24360802-24360824:-] 0.5001 151 7 -12.13 -0.2682 MIMAT0000515 mmu-miR-30d 12449 Ccnf gaAGGUCA-GCC-CCUACAAAUGu |:|| | :|| | |||||||| ccUUCACUAUGGUGAAUGUUUACu 2 21 18 41 [mm9:17:24360802-24360825:-] 0.5001 158 7 -17.33 -0.2753 MIMAT0000516 mmu-miR-148a 12449 Ccnf uguuucaagacaucACGUGACu ||||||| ugugaccguaucucUGCACUGa 2 9 538 559 [mm9:17:24360284-24360305:-] 0.5262 140 7 -13.53 -0.7662 MIMAT0000519 mmu-miR-200a 12449 Ccnf ugUAGCAAUGGUCU-GUCACAAu :|| |: || | ||||||| guGUCCCUG-CAUAUCAGUGUUg 2 21 423 444 [mm9:17:24360399-24360420:-] 0.4176 145 7 -14.75 -0.2316 MIMAT0000528 mmu-miR-18a 12449 Ccnf gauAGAC--GUGAUCUACGUGGAAu |||| | |||| |||||||| aucUCUGGCCCCUAG-UGCACCUUa 2 21 266 289 [mm9:17:24376443-24376466:-] 0.5028 165 7 -22.80 -0.7097 MIMAT0000542 mmu-miR-34a 12449 Ccnf uguuggucGAUUCUGUGACGGu |||:||||||||| cuguuucuCUAGGACACUGCCu 2 15 54 75 [mm9:17:24360768-24360789:-] 0.3868 166 7 -24.41 -0.1136 MIMAT0000548 mmu-miR-322 12449 Ccnf agGUUUUGUAC-UUA-AC-GACGAc ||||| ||| | || ||||| ccCAAAAGAUGUCCUCUGACUGCUc 2 21 922 946 [mm9:17:24375786-24375810:-] 0.5000 122 0 -17.27 -0.1012 MIMAT0000567 mmu-miR-329 12449 Ccnf uuuuuccaaucgacCCACACAa ||||||| gacuguagccuaauGGUGUGUg 2 9 444 465 [mm9:17:24360378-24360399:-] 0.4176 140 7 -13.47 -0.2343 MIMAT0000567 mmu-miR-329 12449 Ccnf uuuuuccaaUCGACCCA-CACAa | |||||| |||| gggaauugaACCUGGGUCGUGUg 2 14 210 232 [mm9:17:24376500-24376522:-] 0.5003 121 0 -15.48 -0.1266 MIMAT0000580 mmu-miR-148b 12449 Ccnf uguuucaagacacuACGUGACu ||||||| ugugaccguaucucUGCACUGa 2 9 538 559 [mm9:17:24360284-24360305:-] 0.5262 140 7 -15.62 -0.7662 MIMAT0000590 mmu-miR-342-3p 12449 Ccnf ugcccacGCUAAAGACACACUCu | | | |||||||| cuguagcCUAAUGGUGUGUGAGg 2 17 446 468 [mm9:17:24360375-24360397:-] 0.4176 148 7 -16.20 -0.1648 MIMAT0000590 mmu-miR-342-3p 12449 Ccnf ugcccacGCUAAAGACACACUCu :|: | |||||||| uugaaccUGGGUCGUGUGUGAGa 2 17 215 237 [mm9:17:24376495-24376517:-] 0.5003 148 7 -23.69 -0.4705 MIMAT0000653 mmu-miR-28 12449 Ccnf gaGUUAUCUGACACUC-GAGGAa ||: || ||| || ||||| gcCAGGAG-CUGACAGCCUCCUu 2 21 273 294 [mm9:17:24360549-24360570:-] 0.5460 122 0 -16.65 -0.1276 MIMAT0000667 mmu-miR-33 12449 Ccnf acguuACGUUGAUGUUACGUg ||| :: |||||||| gcugcUGCUGUCACAAUGCAc 2 17 396 416 [mm9:17:24376316-24376336:-] 0.5052 156 7 -17.09 -0.1737 MIMAT0000673 mmu-miR-181b 12449 Ccnf ugGGUGGCUGUCGUUACUUACAa || :| || :::||||||| agCCUUC-ACUAUGGUGAAUGUu 2 22 16 37 [mm9:17:24360806-24360827:-] 0.5001 151 7 -15.81 -0.1319 MIMAT0000673 mmu-miR-181b 12449 Ccnf uggguGGCUGUCGUUACUUACAa ::|::||: ||||||| ggaguUUGGUAGUUCUGAAUGUu 2 19 292 314 [mm9:17:24376418-24376440:-] 0.5052 154 7 -17.44 -0.3516 MIMAT0000674 mmu-miR-181c 12449 Ccnf ugAGUGGCUGUCCAACUUACAa ||||: |::| ||||||| cuUCACU-AUGG--UGAAUGUu 2 21 19 37 [mm9:17:24360806-24360824:-] 0.5001 151 7 -17.46 -0.1222 MIMAT0000674 mmu-miR-181c 12449 Ccnf ugaguGGCUGUCCA-ACUUACAa ::|::|| | ||||||| ggaguUUGGUAGUUCUGAAUGUu 2 18 292 314 [mm9:17:24376418-24376440:-] 0.5052 152 7 -14.54 -0.3573 MIMAT0004684 mmu-miR-362-3p 12449 Ccnf acuUAGGAACUUGUCCACACAa | ||| ||: ||||||| uguAGCCU--AAU-GGUGUGUg 2 20 447 465 [mm9:17:24360378-24360396:-] 0.4176 146 7 -15.01 -0.2184 MIMAT0004684 mmu-miR-362-3p 12449 Ccnf acuuaggAACUUG--UCCA-CACAa |||||| :||| |||| cugggaaUUGAACCUGGGUCGUGUg 2 16 208 232 [mm9:17:24376500-24376524:-] 0.5003 122 0 -16.02 -0.1229 MIMAT0000743 mmu-miR-379 12449 Ccnf ggaugcaAGGUAUCAGAUGGu ||| | ||||||| aaacccaUCCCU-GUCUACCc 2 15 195 214 [mm9:17:24360629-24360648:-] 0.5460 148 7 -14.98 -0.3895 MIMAT0000746 mmu-miR-381 12449 Ccnf ugUCUCUCGAACGGGAACAUAu :| |||| ||||||| guGGCGAGC-AAAACUUGUAUu 2 21 27 47 [mm9:17:24373975-24373995:-] 0.4693 142 7 -14.00 -0.4036 MIMAT0004745 mmu-miR-384-5p 12449 Ccnf uguAACGGAU-CC-UUAACAAAUGu || ||| || :| ||||||| gccUUCACUAUGGUGAAUGUUUACu 2 21 17 41 [mm9:17:24360802-24360826:-] 0.5001 154 7 -13.42 -0.2753 MIMAT0001091 mmu-miR-410 12449 Ccnf uguccgguagacacAAUAUAa |||||| caguuuuuacuuauUUAUAUa 2 8 66 86 [mm9:17:24376646-24376666:-] 0.5003 120 6 -3.94 -0.1014 MIMAT0001095 mmu-miR-370 12449 Ccnf uggucCAAGGUGGGGUC-GUCCg |||||| ||| |||| agugaGUUCCAGGACAGCCAGGg 2 18 103 125 [mm9:17:24367994-24368016:-] 0.5001 125 0 -19.89 -0.2315 MIMAT0001095 mmu-miR-370 12449 Ccnf ugGUCCAAGGUGGGGUCGUCCg || ||:| ||||||| gaCAAUGUCUAGAGCAGCAGGu 2 21 1231 1252 [mm9:17:24375480-24375501:-] 0.5007 148 7 -17.88 -0.1899 MIMAT0001542 mmu-miR-449a 12449 Ccnf uggucgauuGUUAUGUGACGGu :|: |||||||| cuguuucucUAGGACACUGCCu 2 14 54 75 [mm9:17:24360768-24360789:-] 0.3868 149 7 -17.28 -0.1125 MIMAT0003112 mmu-miR-489 12449 Ccnf cgACGGUAU-AUACACCAC-AGUAa ||:|| | || | ||| |||| cuUGUCACAGAAUAUUGUGUUCAUg 2 22 792 816 [mm9:17:24375916-24375940:-] 0.5121 124 0 -10.44 -0.3774 MIMAT0003128 mmu-miR-485 12449 Ccnf cuUAAGUAGUGCCGGUCGGAGa | | | || | :||||||| ucAGUGACCA-GCUCAGCCUCu 2 21 132 152 [mm9:17:24360691-24360711:-] 0.5711 150 7 -18.58 -0.2172 MIMAT0003128 mmu-miR-485 12449 Ccnf cuuaaguagUGCCGGUCGGAGa :| | ||||||| aggccaggaGCUGACAGCCUCc 2 14 271 292 [mm9:17:24360551-24360572:-] 0.5460 145 7 -15.90 -0.2555 MIMAT0003130 mmu-miR-486 12449 Ccnf gagccCCGUCGAGUC-AUGUCCu || ||: || |||||| cuccuGGAAGUGGAGUUACAGGc 2 18 160 182 [mm9:17:24376550-24376572:-] 0.5003 121 6 -19.72 -0.1083 MIMAT0003168 mmu-miR-543 12449 Ccnf uucuucacGUGGCGCUUACAAa :|: |:||||||| gccuucacUAUGGUGAAUGUUu 2 15 17 38 [mm9:17:24360805-24360826:-] 0.5001 150 7 -14.61 -0.5418 MIMAT0003168 mmu-miR-543 12449 Ccnf uuCUUCA---CGU-GGCGCUUACAAa |:||| |:| :: :||||||| aaGGAGUUUGGUAGUUCUGAAUGUUu 2 21 290 315 [mm9:17:24376417-24376442:-] 0.5052 146 7 -16.25 -0.5292 MIMAT0003172 mmu-miR-542-3p 12449 Ccnf aaAGUCAAUAGUUAGACAGUGu ||||| | ||||||| ucUCAGUGCUGCUGCUGUCACa 2 21 389 410 [mm9:17:24376322-24376343:-] 0.5052 152 7 -20.25 -0.2541 MIMAT0003889 mmu-miR-758 12449 Ccnf aucaccuggucCAGUGUUu ||||||| gugcugcugcuGUCACAAu 2 9 394 412 [mm9:17:24376320-24376338:-] 0.5052 140 7 -9.99 -0.2212 MIMAT0003890 mmu-miR-551b 12449 Ccnf gaCUUUGGUUCAUACCCAGCg |:||:::| ||||||| ugGGAAUUGAACCUGGGUCGu 2 20 209 229 [mm9:17:24376503-24376523:-] 0.5003 155 7 -19.12 -0.1037 MIMAT0003460 mmu-miR-449c 12449 Ccnf ggucGAUCGUUACGUGACGGa |||| | ||||||| uucuCUAGGA---CACUGCCu 2 18 58 75 [mm9:17:24360768-24360785:-] 0.3868 145 7 -18.49 -0.1020 MIMAT0003513 mmu-miR-505 12449 Ccnf ucuuuuGGUCGU----UCACAACUGc || ||| ||||||||| ugugucCCUGCAUAUCAGUGUUGACu 2 17 422 447 [mm9:17:24360396-24360421:-] 0.4176 151 7 -17.43 -0.1480 MIMAT0004324 mmu-miR-181d 12449 Ccnf ugGGUGGCUGUUGUUACUUACAa || :| || |:::||||||| agCCUUC-ACUAUGGUGAAUGUu 2 22 16 37 [mm9:17:24360806-24360827:-] 0.5001 159 7 -16.73 -0.1306 MIMAT0004324 mmu-miR-181d 12449 Ccnf uggguGGCUGUUGUUACUUACAa ::|::|:: ||||||| ggaguUUGGUAGUUCUGAAUGUu 2 19 292 314 [mm9:17:24376418-24376440:-] 0.5052 150 7 -14.80 -0.3544 MIMAT0004858 mmu-miR-18b 12449 Ccnf gauugucGUGAUCUACGUGGAAu | |||| |||||||| cucuggcCCCUAG-UGCACCUUa 2 17 268 289 [mm9:17:24376443-24376464:-] 0.5028 158 7 -24.29 -0.7097 MIMAT0005447 mmu-miR-449b 12449 Ccnf cggucGAUUGUUGUGACGGa |||: :|||||||| uuucuCUAG-GACACUGCCu 2 16 57 75 [mm9:17:24360768-24360786:-] 0.3868 153 7 -20.08 -0.1125 MIMAT0004937 mmu-miR-875-5p 12449 Ccnf guggacuAUUUUGACU-CCAUAu |:|||: || ||||| aagcauuUGAAAUAGAGGGUAUu 2 16 621 643 [mm9:17:24360200-24360222:-] 0.5868 123 0 -13.97 -1.0636

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G063018 Ccnf Mus musculus 12449

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Ccnf mmu-miR-693-3p beg:464 end:481 pic:3' AATGTCGGTGTAGACTTTCGACG 5'& .||| || ||||||| &5' ----GGCC----CTTAAAGCTG- 3' Ccnf mmu-miR-139-5p beg:436 end:451 pic:3' GACCTCTGTGCACG--TGACATCT 5'& |||. ||||||| &5' ----------GTGTTGACTGTAG- 3' Ccnf mmu-miR-34b-5p beg:56 end:76 pic:3' TGTTAGTCGATTAATGTGACGGA 5'& || |||. ||||||||| &5' ----TCT-CTAGG-ACACTGCCT 3' Ccnf mmu-miR-34c beg:56 end:76 pic:3' CGTTAGTCGATTGATGTGACGGA 5'& || |||. ||||||||| &5' ----TCT-CTAGG-ACACTGCCT 3' Ccnf mmu-miR-34a beg:59 end:75 pic:3' TGTTGGTCGATTCTGTGACGGT 5'& |||.||||||||| &5' --------CTAGGACACTGCC- 3' Ccnf mmu-miR-449c beg:59 end:76 pic:3' GGTCGATCGTTACGTGACGGA 5'& |||| | |||||||| &5' ----CTAGGA---CACTGCCT 3' Ccnf mmu-miR-1186 beg:381 end:392 pic:3' GTACGGAAATTAAGGTCGTGAG 5'& |||||||| &5' --------------CAGCACTC 3' Ccnf mmu-miR-763 beg:165 end:180 pic:3' CGGTGACCAAGAAGGGTCGACC 5'& |||| |||||||| &5' GCCA---------CCCAGCTG- 3' Ccnf mmu-miR-1982star beg:490 end:509 pic:3' GGAGGGGTCCTGGGAGGGTT 5'& ||||. | ||||||||| &5' --TCCCT--GTCCCTCCCAA 3' Ccnf mmu-miR-705 beg:384 end:401 pic:3' ACGGGTGGGGTGGAGGGTGG 5'& |||.|. |||||||| &5' ----CACTCT-CCTCCCAC- 3' Ccnf mmu-miR-186star beg:90 end:101 pic:3' GGGTTTTTTAAGTGGAATCCCG 5'& |||||||| &5' -------------CCTTAGGG- 3' Ccnf mmu-miR-543 beg:22 end:39 pic:3' TTCTTCACGTGGCGCTTACAAA 5'& .|. |.|||||||| &5' --------TATGGTGAATGTTT 3' Ccnf mmu-miR-484 beg:414 end:424 pic:3' TAGCCCTCCCCTGACTCGGACT 5'& ||||||| &5' --------------GAGCCTG- 3' Ccnf mmu-miR-337-3p beg:268 end:285 pic:3' TCCGTAGTATATCCTCGACTT 5'& |||| ||||||||| &5' AGGCC------AGGAGCTGA- 3' Ccnf mmu-miR-362-3p beg:449 end:465 pic:3' ACTTAGGAACTTGTCCACACAA 5'& ||| ||. ||||||| &5' -----CCT--AAT-GGTGTGT- 3' Ccnf mmu-miR-379 beg:199 end:214 pic:3' GGATGCAAGGTATCAGATGGT 5'& ||| ||||||| &5' -------TCCCT-GTCTACC- 3' Ccnf mcmv-miR-m108-2-5p.1 beg:528 end:547 pic:3' GCCACGAGCGCAGCT-CACTGGCG 5'& |.| || |||||||. &5' ------TTGTATCCATGTGACCGT 3' Ccnf mcmv-miR-m01-1 beg:379 end:397 pic:3' GGCAAGCTGCAATAAGAGGAGA 5'& ||| ||||||| &5' ------GACAGCACTCTCCTC- 3' Ccnf mcmv-miR-m01-3 beg:4 end:26 pic:3' AGCTC-CGTTGTCAGCGAAGTGGC 5'& ||| |. .|| | ||||||. &5' --GAGTGTGTTAG-C-CTTCACT- 3' Ccnf mcmv-miR-m107-1-5p beg:119 end:141 pic:3' CCACTGA-GCTCTGCTCACTGGC 5'& ||| .||| ||||||| &5' ---GACACTGAGCTCAGTGACC- 3' Ccnf mcmv-miR-M44-1 beg:635 end:657 pic:3' TGGCGCCGAGACC--TTTTTCTAT 5'& ||. .|| ||||||||| &5' -----GGTATTGAATAAAAAGATA 3' Ccnf mmu-miR-101a beg:76 end:88 pic:3' AAGTCAATAGTGTCATGACAT 5'& .|||||||. &5' ------------GGTACTGTG 3' Ccnf mmu-miR-101b beg:69 end:88 pic:3' AAGTC-GATAGTGTCATGACAT 5'& | |||| .|||||||. &5' ----GCCTATG--GGTACTGTG 3' Ccnf mmu-miR-1190 beg:36 end:57 pic:3' CTGTCTCCC-CTTGGAGTCGACT 5'& || ||||| |..|. |||| &5' -ACTGAGGGAGGGCT---GCTG- 3' Ccnf mmu-miR-1193 beg:299 end:321 pic:3' CTATCATTTTGCCCACTGGAT 5'& ||| . | ||||.|||| &5' --TAGCGGCCCAGGTGGCCTA 3' Ccnf mmu-miR-1197 beg:204 end:227 pic:3' TCTTCATCTGGT---ACACAGGAT 5'& || ||| ||||||||. &5' ----GTCTACCCTTCTGTGTCCTG 3' Ccnf mmu-miR-135a beg:551 end:573 pic:3' AGTGTATCCTTATT-TTTCGGTAT 5'& ||| |||| ||.||||| &5' -CACT---GAATTTCAAGGCCAT- 3' Ccnf mmu-miR-135b beg:551 end:573 pic:3' AGTGTATCCTTACT-TTTCGGTAT 5'& ||| |||| ||.||||| &5' -CACT---GAATTTCAAGGCCAT- 3' Ccnf mmu-miR-136 beg:592 end:612 pic:3' GGTAGTAGTTTTGTTTACCTCA 5'& |||. | |||||.| &5' ----CATTTCTTCTAATGGGG- 3' Ccnf mmu-miR-141 beg:422 end:445 pic:3' GGTAGAAATGGTCTGTCACAAT 5'& .|| |.| |||||||. &5' --GTCCCTGCATATCAGTGTTG 3' Ccnf mmu-miR-145 beg:462 end:483 pic:3' TCCCTAAGGACCCTTTTGACCTG 5'& || || |||.||||| &5' ---GAGGCCCTT-AAAGCTGGA- 3' Ccnf mmu-miR-146bstar beg:83 end:101 pic:3' TGGTCTTGAC-TC-AGGGATCCCG 5'& || || |||.||||| &5' --------TGTAGATCCTTAGGG- 3' Ccnf mmu-miR-148a beg:542 end:560 pic:3' TGTTTCAAGACATC---ACGTGACT 5'& ||| |||||||| &5' ----------GTATCTCTGCACTGA 3' Ccnf mmu-miR-148b beg:542 end:560 pic:3' TGTTTCA-AGACACTACGTGACT 5'& || ||| |||||||| &5' -----GTATCTC---TGCACTGA 3' Ccnf mmu-miR-152 beg:540 end:560 pic:3' GGTTCAAGACAGTACGTGACT 5'& ||. || || |||||||| &5' CCGTA-TC--TC-TGCACTGA 3' Ccnf mmu-miR-15astar beg:301 end:320 pic:3' ACTCCGTCGTGTCATACCGGAC 5'& ||.|| ||| .|||||| &5' ----GCGGCCCAG-GTGGCCT- 3' Ccnf mmu-miR-181c beg:19 end:38 pic:3' TGAGTGGCTGTCCAACTTACAA 5'& .||||. || |||||||| &5' -TTCACTAT--GG-TGAATGTT 3' Ccnf mmu-miR-181d beg:17 end:38 pic:3' TGGGTGGCTGTTGTTACTTACAA 5'& || .| || | .|||||||| &5' --CCTTC-ACTATGGTGAATGTT 3' Ccnf mmu-miR-1906 beg:37 end:58 pic:3' TCGGGACGGAG-TCCGACGACGT 5'& ||| .||||||||. &5' ----CTGAGGGAGGGCTGCTGT- 3' Ccnf mmu-miR-1942 beg:617 end:631 pic:3' GTTGGTCTACTTCTGTAGACT 5'& |||| |||.||| &5' ---------GAAG-CATTTGA 3' Ccnf mmu-miR-1946a beg:3 end:31 pic:3' TTTTCACACA--CGGTGGTGACGGGCCGA 5'& ..||||||| ||| .|||| .||. &5' -GGAGTGTGTTAGCCTTCACTA--TGGT- 3' Ccnf mmu-miR-1962 beg:132 end:153 pic:3' TACACAGGGTCACGGTCGGAGA 5'& ||| |||| .|||||||| &5' --GTGA-CCAGC-TCAGCCTCT 3' Ccnf mmu-miR-1962 beg:271 end:292 pic:3' TACACAGGGTCA-CG---GTCGGAGA 5'& |||| || ||||||| &5' -------CCAGGAGCTGACAGCCTC- 3' Ccnf mmu-miR-1968 beg:164 end:181 pic:3' TCAGGTGGTAGGAATTGTCGACGT 5'& || ||||| ||||||. &5' AG-CCACC--------CAGCTGT- 3' Ccnf mmu-miR-196a beg:63 end:77 pic:3' GGGTTGTTGTACTTTGATGGAT 5'& || |||.|||| &5' -----------GACACTGCCTA 3' Ccnf mmu-miR-196b beg:60 end:77 pic:3' GGGTTGTTGTCCTTTGATGGAT 5'& .|||| |||.|||| &5' --------TAGGACACTGCCTA 3' Ccnf mmu-miR-1982star beg:55 end:75 pic:3' GGAGGGGTCCTGGGAGGGTT 5'& .||.|.||||| || || &5' -TTCTCTAGGACACTGCC-- 3' Ccnf mmu-miR-1983 beg:300 end:317 pic:3' TCTTTTGTACGAGGTCCACTC 5'& |.|. || |||||||. &5' ----AGCG-GC-CCAGGTGG- 3' Ccnf mmu-miR-199a-3p beg:36 end:58 pic:3' ATTGGTTACACGTCTGATGACA 5'& || | | .|.||.|||| &5' --ACTGAGG-GAGGGCTGCTGT 3' Ccnf mmu-miR-199b beg:36 end:58 pic:3' ATTGGTTACACGTCTGATGACA 5'& || | | .|.||.|||| &5' --ACTGAGG-GAGGGCTGCTGT 3' Ccnf mmu-miR-20bstar beg:435 end:451 pic:3' GATCTTCACGAGTGTGACGTCA 5'& ||||.| ||||.|| &5' -----AGTGTTG--ACTGTAG- 3' Ccnf mmu-miR-2140 beg:537 end:558 pic:3' TGGTGGTTCT-AGACGTGGA 5'& . |||. |||||||. &5' -TGACCGTATCTCTGCACT- 3' Ccnf mmu-miR-21star beg:46 end:59 pic:3' CTGTCGGGTAGCTGACGACAAC 5'& |.|||||||| &5' -----------GGCTGCTGTT- 3' Ccnf mmu-miR-223 beg:269 end:287 pic:3' ACCCCATAAACTG---TTTGACTGT 5'& |.| .|.|||||| &5' ----------GGCCAGGAGCTGACA 3' Ccnf mmu-miR-23b beg:449 end:467 pic:3' CCATTAGGG--ACCGTTACACTA 5'& ||. |||. .||||| &5' ------CCTAATGGT-GTGTGA- 3' Ccnf mmu-miR-27a beg:183 end:197 pic:3' CGCCTTGAATCGGTGACACTT 5'& || ||||||| &5' ----------GCACCTGTGAA 3' Ccnf mmu-miR-27astar beg:127 end:151 pic:3' ACGAGT-GTTCGTCGATTCGGGA 5'& ||||| ..| ||||| ||||. &5' -GCTCAGTGACCAGCTCAGCCT- 3' Ccnf mmu-miR-27b beg:183 end:197 pic:3' CGTCTTGAATCGGTGACACTT 5'& || ||||||| &5' ----------GCACCTGTGAA 3' Ccnf mmu-miR-294 beg:610 end:629 pic:3' TGTGTGTTTTCCCTTCGTGAAA 5'& |||||| |||||||.|| &5' ----ACAAAA-GGAAGCATTT- 3' Ccnf mmu-miR-295 beg:606 end:629 pic:3' TCTGAGTTTTCATCATCGTGAAA 5'& .|. |||||| ||||.|| &5' GGGAACAAAAGGA--AGCATTT- 3' Ccnf mmu-miR-298 beg:540 end:555 pic:3' CCCTTCTTGTCGGGA--GGAGACGG 5'& || .|||||| &5' ------------CCGTATCTCTGC- 3' Ccnf mmu-miR-302a beg:607 end:630 pic:3' AGTGGTTTTGTA--CCTTCGTGAAT 5'& ..|||| |||||||.||. &5' -----GGAACAAAAGGAAGCATTTG 3' Ccnf mmu-miR-302b beg:607 end:630 pic:3' GATGATTTTGTA--CCTTCGTGAAT 5'& ..|||| |||||||.||. &5' -----GGAACAAAAGGAAGCATTTG 3' Ccnf mmu-miR-302c beg:607 end:629 pic:3' GGTGACTTTGTA--CCTTCGTGAA 5'& |.|||| |||||||.|| &5' -----GGAACAAAAGGAAGCATTT 3' Ccnf mmu-miR-302d beg:608 end:630 pic:3' TGTGAGTTTGTA--CCTTCGTGAAT 5'& .|||| |||||||.||. &5' ------GAACAAAAGGAAGCATTTG 3' Ccnf mmu-miR-3099 beg:443 end:456 pic:3' AGGGGTTGGAGAGAGATCGGAT 5'& || ||||||| &5' ------------CTGTAGCCTA 3' Ccnf mmu-miR-30b beg:24 end:41 pic:3' TCGACTCACATCCTACAAATGT 5'& || ||| |||||||| &5' ---TG-GTGA---ATGTTTAC- 3' Ccnf mmu-miR-30c beg:25 end:41 pic:3' CGACTCTCACATCCTACAAATGT 5'& .||| |||||||| &5' ------GGTGA---ATGTTTAC- 3' Ccnf mmu-miR-30c-2star beg:492 end:508 pic:3' TCTCATTTGTCGGAA---GAGGGTC 5'& ||| |||||| &5' -----------CCTGTCCCTCCCA- 3' Ccnf mmu-miR-30c-2star beg:3 end:27 pic:3' TCTCATTT-GTCGGAAGAGGGTC 5'& .||||. .||||||| |.| &5' GGAGTGTGTTAGCCTTCA-CTA- 3' Ccnf mmu-miR-30c-2star beg:378 end:400 pic:3' TCTCATTTGTCG-GAA--GAGGGTC 5'& |.||||| || |||||| &5' -----AGACAGCACTCTCCTCCCA- 3' Ccnf mmu-miR-30d beg:21 end:41 pic:3' GAAGGTCAGCC-CCTACAAATGT 5'& |.| .|| | |||||||| &5' ---CTA--TGGTGAATGTTTAC- 3' Ccnf mmu-miR-327 beg:545 end:568 pic:3' TAGGAGTACGG-----GGAGTTCA 5'& .||| ||| ..||||| &5' --TCTC-TGCACTGAATTTCAAG- 3' Ccnf mmu-miR-330 beg:401 end:419 pic:3' CGGATTCTGTGTCCGGGTCTCT 5'& ||| || |||.||.|| &5' -CCTT-----CA-GCCTAGGGA 3' Ccnf mmu-miR-337-3p beg:463 end:481 pic:3' TCCGTAGTATATCCTCGACTT 5'& |||| |||||.| &5' AGGCCCTTAA----AGCTGGA 3' Ccnf mmu-miR-342-3p beg:458 end:468 pic:3' TGCCCACGCTAAAGACACACTCT 5'& ||||||||. &5' --------------TGTGTGAGG 3' Ccnf mmu-miR-342-5p beg:370 end:393 pic:3' GAGTTAGTGTCTATCGTGGGGA 5'& ||||| ||| |||||.|. &5' CTCAAGTGAAGACAGCACTCT- 3' Ccnf mmu-miR-3470a beg:492 end:514 pic:3' GGTCGGACCAGAT---GTTTCACT 5'& ||| ||| |||||||. &5' ----CCT-GTCCCTCCCAAAGTGG 3' Ccnf mmu-miR-351 beg:89 end:102 pic:3' GTCCGAGTTTCCCGAGGAGTCCCT 5'& ||||.||||. &5' --------------TCCTTAGGGG 3' Ccnf mmu-miR-365 beg:630 end:645 pic:3' TATTCCTAAAAATC-CCCGTAAT 5'& ||| |||.|||. &5' -----------TAGAGGGTATTG 3' Ccnf mmu-miR-376c beg:234 end:256 pic:3' TGCACTT-TAAA-GGAGATACAA 5'& ||. || |||||.|||| &5' ----GAGCATGAGCCTCTGTGTT 3' Ccnf mmu-miR-376c beg:507 end:525 pic:3' TGCACTTTAAAGGAGATACAA 5'& |||. ||. |||.||| &5' --GTGG---TTTGTCTGTGT- 3' Ccnf mmu-miR-377 beg:445 end:467 pic:3' TGTTTTCAACGGAA----ACACACTA 5'& || |||| ||||||| &5' ------GTAGCCTAATGGTGTGTGA- 3' Ccnf mmu-miR-378star beg:103 end:124 pic:3' TGTGTCCTGGACCTCAGTCCTC 5'& ||| | | ||||||| &5' ---CAGTGCAAGCTGTCAGGA- 3' Ccnf mmu-miR-380-3p beg:419 end:436 pic:3' TTCTACACCTGGTATGATGTAT 5'& |||| || ||.|||| &5' ----TGTGT-CC---CTGCATA 3' Ccnf mmu-miR-384-5p beg:21 end:41 pic:3' TGTAACGGAT-CC-TTAACAAATGT 5'& ||| || .| ||||||| &5' -------CTATGGTGAATGTTTAC- 3' Ccnf mmu-miR-423-5p beg:487 end:505 pic:3' TTTCAGAGCG-AGAGACGGGGAGT 5'& || || |||.||||| &5' --------GCATCCCTGTCCCTC- 3' Ccnf mmu-miR-449a beg:53 end:75 pic:3' TGGTCGATT-GTTA-TGTGACGGT 5'& |.| | |||||||| &5' ----GTTTCTCTAGGACACTGCC- 3' Ccnf mmu-miR-449b beg:53 end:76 pic:3' CGGTC-GATTGTTGTGACGGA 5'& |.. |||. .||||||||| &5' GTTTCTCTAG-GACACTGCCT 3' Ccnf mmu-miR-449b beg:170 end:192 pic:3' CGGTCGATTGT-TGTGACGGA 5'& ||||||. || .|.| ||| &5' -CCAGCTGTCATGCGCA-CCT 3' Ccnf mmu-miR-452 beg:91 end:116 pic:3' CAGAGTCAA---AGGAGACGTTTGT 5'& ||.|| |.| |||||.| &5' --CTTAGGGGAGTTCAGTGCAAGC- 3' Ccnf mmu-miR-485 beg:129 end:153 pic:3' CTTAAGT-AGTGC-CG-GTCGGAGA 5'& ||| | || || |||||||| &5' ----TCAGTGACCAGCTCAGCCTCT 3' Ccnf mmu-miR-493 beg:3 end:24 pic:3' GGACCGTGTGTCATCCTGGAAGT 5'& || || .|||||| &5' ---GGAGTGT-GTTA-GCCTTCA 3' Ccnf mmu-miR-505 beg:425 end:447 pic:3' TCTTTTGGTCGT----TCACAACTGC 5'& || ||| ||||||||| &5' ------CCTGCATATCAGTGTTGAC- 3' Ccnf mmu-miR-509-5p beg:465 end:485 pic:3' TACTAACGGTGTAA---GACCTCAT 5'& ||| | ||||||| &5' ------GCC-CTTAAAGCTGGAGT- 3' Ccnf mmu-miR-542-3p beg:163 end:184 pic:3' AAAGTCAATA-GTTAGACAGTGT 5'& ||| ||. ||||||. &5' ---CAGCCACCCAG-CTGTCAT- 3' Ccnf mmu-miR-666-5p beg:564 end:584 pic:3' CCGAGAGTGTCGACACGGGCGA 5'& ||| ||. || ||||.|. &5' GGC---CATT-CTTTGCCTGT- 3' Ccnf mmu-miR-672 beg:130 end:152 pic:3' AGTGTGTGTCATG---TG-GTTGGAGT 5'& | ||||. .| ||.|||| &5' -----CTCAGTGACCAGCTCAGCCTC- 3' Ccnf mmu-miR-674 beg:89 end:112 pic:3' ATGTGGTGAGGGTA------GAGTCACG 5'& |||. .||||||| &5' --------TCCTTAGGGGAGTTCAGTGC 3' Ccnf mmu-miR-677 beg:542 end:561 pic:3' AGTCTTCGATTAGTA--GTGACTT 5'& |. ||| ||||||| &5' ------GT--ATCTCTGCACTGAA 3' Ccnf mmu-miR-679 beg:309 end:330 pic:3' TGGTTCTCAGTGGA--GTGTCAGG 5'& .|| .||| ||||||.| &5' ------GGTGGCCTAACACAGTTC 3' Ccnf mmu-miR-682 beg:433 end:451 pic:3' GTCTGAAGTGAC-ACTGACGTC 5'& ||| || ||||||.|| &5' ------TCAGTGTTGACTGTAG 3' Ccnf mmu-miR-688 beg:412 end:425 pic:3' CTTATTCATCAGCGGACGCT 5'& .| |||||.| &5' --------GGGAGCCTGTG- 3' Ccnf mmu-miR-690 beg:3 end:21 pic:3' AAACCAACACTCGGATCGGAAA 5'& || ||| | .||||||| &5' ---GGA-GTGTG-TTAGCCTT- 3' Ccnf mmu-miR-693-3p beg:43 end:55 pic:3' AATGTCGGTGTAGACTTTCGACG 5'& ||..||||| &5' --------------GAGGGCTGC 3' Ccnf mmu-miR-706 beg:43 end:64 pic:3' AAAAAACTCTGTCC----CAAAGAGA 5'& |.|| .| |||||||| &5' ------GGGAGGGCTGCTGTTTCTCT 3' Ccnf mmu-miR-743a beg:568 end:588 pic:3' AGATGAGT--CGAACCACAGAAAG 5'& |.|| || ||||||| &5' ---ATTCTTTGCC---TGTCTTT- 3' Ccnf mmu-miR-743b-3p beg:568 end:588 pic:3' AGATAAGT--CGTACTACAGAAAG 5'& |||| || ||||||| &5' ---ATTCTTTGCC---TGTCTTT- 3' Ccnf mmu-miR-744 beg:412 end:434 pic:3' ACGACAATCGGGATC-GGGGCGT 5'& | ||||. | |||.||| &5' ----GGGAGCCTGTGTCCCTGCA 3' Ccnf mmu-miR-7b beg:590 end:606 pic:3' TGTTGTTTTAGTGTTCAGAAGGT 5'& .||| |||||.| &5' ----------TACATTTCTTCTA 3' Ccnf mmu-miR-872 beg:436 end:455 pic:3' GGACTTGATTGTTCATTGGAA 5'& | .|.|| |||.||| &5' ---GTGTTGACT-GTAGCCT- 3' Ccnf mmu-miR-872 beg:271 end:295 pic:3' GGA-CTTGATTGTTCATTGGAA 5'& || ||.||.|||. |||| &5' CCAGGAGCTGACAGCCT-CCTT 3' Ccnf mmu-miR-878-3p beg:168 end:186 pic:3' AGATGGGTCACACCACAGTACG 5'& |||||| |||||||| &5' ---ACCCAGC----TGTCATGC 3' Ccnf mmu-miR-879 beg:233 end:251 pic:3' CCGAATCTCGATATTCGGAGA 5'& .|||| ||.||||||| &5' -----GGAGC-ATGAGCCTCT 3' Ccnf mmu-miR-881 beg:307 end:329 pic:3' AGATAAGTCTTTTC----TGTGTCAA 5'& |||. .| |||||||| &5' ------CAGGT-GGCCTAACACAGTT 3' Ccnf mmu-miR-881star beg:42 end:64 pic:3' TCTACACTGACAATAGAGAGAC 5'& .|| |.||| |.|.||||| &5' GGAG--GGCTGCTGTTTCTCT- 3' Ccnf mmu-miR-93star beg:41 end:66 pic:3' GCCCTTC--ACGATCGAGTCGTCA 5'& ||||.| ||||. .|| .|| &5' -GGGAGGGCTGCTGTTTCTCTAG- 3' Ccnf mmu-miR-713 beg:95 end:113 pic:3' CGACACACGGAAGTCACGT 5'& | | ||||||||| &5' ---GGG-GAGTTCAGTGCA 3' Ccnf mmu-miR-1937c beg:223 end:239 pic:3' ACCCCCGAGA-AGGCCCTA 5'& |.| | ||||||| &5' -----GTTGTCTCCGGGA- 3' Ccnf mmu-miR-1937b beg:227 end:239 pic:3' ACCCCCGAGCAGGCCCTA 5'& || ||||||| &5' -------TC-TCCGGGA- 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Ccnf RAID00002093 mmu-miR-98-5p miRNA MIMAT0000545 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID00152227 mmu-miR-181a-5p miRNA MIMAT0000210 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID00169451 mmu-miR-486a-5p miRNA MIMAT0003130 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID00185578 mmu-miR-6919-5p miRNA MIMAT0027738 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID00206862 mmu-miR-200a-3p miRNA MIMAT0000519 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID00261323 mmu-miR-181c-5p miRNA MIMAT0000674 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID00271932 mmu-miR-141-3p miRNA MIMAT0000153 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID00459521 mmu-miR-195a-5p miRNA MIMAT0000225 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID00534605 mmu-miR-6715-3p miRNA MIMAT0029877 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID00558970 mmu-miR-6943-3p miRNA MIMAT0027787 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID00573468 mmu-miR-337-3p miRNA MIMAT0000578 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID00665470 mmu-miR-148b-3p miRNA MIMAT0000580 Ccnf mRNA 12449 CLIP-seq//Prediction 0.6478 Ccnf RAID00697236 mmu-miR-758-3p miRNA MIMAT0003889 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID00728548 mmu-miR-489-3p miRNA MIMAT0003112 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID00808684 mmu-miR-33-5p miRNA MIMAT0000667 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID00900337 mmu-miR-449b miRNA MIMAT0005447 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID00932394 mmu-miR-338-3p miRNA MIMAT0000582 Ccnf mRNA 12449 CLIP-seq 0.5483 Ccnf RAID00958019 mmu-miR-505-3p miRNA MIMAT0003513 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID00975764 mmu-miR-381-3p miRNA MIMAT0000746 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID01103975 mmu-miR-7080-3p miRNA MIMAT0028067 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID01122106 mmu-miR-329-3p miRNA MIMAT0000567 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID01206424 mmu-miR-7229-3p miRNA MIMAT0028427 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID01216799 mmu-miR-30e-5p miRNA MIMAT0000248 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID01336951 mmu-miR-484 miRNA MIMAT0003127 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID01434069 mmu-miR-34c-5p miRNA MIMAT0000381 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID01470830 mmu-miR-28a-5p miRNA MIMAT0000653 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID01583022 mmu-miR-7031-3p miRNA MIMAT0027967 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID01630796 mmu-miR-34b-5p miRNA MIMAT0000382 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID01647326 mmu-miR-34a-5p miRNA MIMAT0000542 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID01725363 mmu-miR-6987-5p miRNA MIMAT0027876 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID01742805 mmu-miR-7236-5p miRNA MIMAT0028440 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID01849757 mmu-miR-449a-5p miRNA MIMAT0001542 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID01861743 mmu-miR-410-3p miRNA MIMAT0001091 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID01864853 mmu-miR-152-3p miRNA MIMAT0000162 Ccnf mRNA 12449 CLIP-seq//Prediction 0.6559 Ccnf RAID01880243 mmu-miR-362-3p miRNA MIMAT0004684 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID01895146 mmu-miR-551b-3p miRNA MIMAT0003890 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID01931122 mmu-miR-5112 miRNA MIMAT0020620 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID02013760 mmu-miR-181d-5p miRNA MIMAT0004324 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID02031380 mmu-miR-541-5p miRNA MIMAT0003170 Ccnf mRNA 12449 NGS (Next Generation Sequencing) 0.5483 Ccnf RAID02048597 mmu-miR-7226-3p miRNA MIMAT0028421 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID02076141 mmu-miR-322-5p miRNA MIMAT0000548 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID02089924 mmu-miR-1962 miRNA MIMAT0009435 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID02155965 mmu-miR-148a-3p miRNA MIMAT0000516 Ccnf mRNA 12449 CLIP-seq//Prediction 0.6478 Ccnf RAID02225857 mmu-miR-760-5p miRNA MIMAT0017245 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID02226536 mmu-miR-384-5p miRNA MIMAT0004745 Ccnf mRNA 12449 Prediction 0.2202 Ccnf RAID02350142 mmu-miR-1197-3p miRNA MIMAT0005858 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID02356394 mmu-miR-182-5p miRNA MIMAT0000211 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID02438768 mmu-miR-1249-5p miRNA MIMAT0014804 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID02439023 mmu-miR-3079-3p miRNA MIMAT0014867 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID02456045 mmu-miR-30b-5p miRNA MIMAT0000130 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID02573687 mmu-miR-150-5p miRNA MIMAT0000160 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID02596984 mmu-miR-30c-5p miRNA MIMAT0000514 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID02628809 mmu-miR-149-5p miRNA MIMAT0000159 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID02647807 mmu-miR-24-3p miRNA MIMAT0000219 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID02713004 mmu-miR-6955-5p miRNA MIMAT0027810 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID02714557 mmu-miR-342-3p miRNA MIMAT0000590 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID02742008 mmu-miR-186-5p miRNA MIMAT0000215 Ccnf mRNA 12449 CLIP-seq//Prediction 0.6308 Ccnf RAID02743625 mmu-miR-18b-5p miRNA MIMAT0004858 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID02799766 mmu-miR-6912-5p miRNA MIMAT0027724 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID02877064 mmu-miR-542-3p miRNA MIMAT0003172 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID02892568 mmu-miR-3113-3p miRNA MIMAT0014960 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID02899652 mmu-miR-136-5p miRNA MIMAT0000148 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID03096041 mmu-miR-449c-5p miRNA MIMAT0003460 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID03216213 mmu-miR-181b-5p miRNA MIMAT0000673 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID03323389 mmu-miR-485-5p miRNA MIMAT0003128 Ccnf mRNA 12449 Prediction 0.2202 Ccnf RAID03393804 mmu-miR-370-3p miRNA MIMAT0001095 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID03424283 mmu-miR-30a-5p miRNA MIMAT0000128 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID03456220 mmu-miR-543-3p miRNA MIMAT0003168 Ccnf mRNA 12449 Prediction 0.2202 Ccnf RAID03585069 mmu-miR-379-5p miRNA MIMAT0000743 Ccnf mRNA 12449 CLIP-seq//Prediction 0.6308 Ccnf RAID03659229 mmu-miR-6929-5p miRNA MIMAT0027758 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID03691285 mmu-miR-30d-5p miRNA MIMAT0000515 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID03699756 mmu-miR-9-5p miRNA MIMAT0000142 Ccnf mRNA 12449 NGS (Next Generation Sequencing) 0.5483 Ccnf RAID03713758 mmu-miR-18a-5p miRNA MIMAT0000528 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID03803005 mmu-miR-6541 miRNA MIMAT0025588 Ccnf mRNA 12449 Prediction 0.1828 Ccnf RAID03897810 mmu-miR-875-5p miRNA MIMAT0004937 Ccnf mRNA 12449 Prediction 0.1828