DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000377 mmu-miR-299* 67513 2610002J02Rik uacaUACACCCUGCCA-UUUGGu | ||| | | || ||||| ucucAGGUGUGCCUGUGAAACCg 2 19 219 241 [mm9:4:154630535-154630557:+] 0.5012 122 0 -12.74 -0.2792 MIMAT0000569 mmu-miR-330* 67513 2610002J02Rik agagacguccgggacACGAAAcg |||||| gaauaaauuuuaaguUGCUUUcc 3 9 454 476 [mm9:4:154630770-154630792:+] 0.5000 120 0 -6.11 -0.1613 MIMAT0003896 mmu-miR-763 67513 2610002J02Rik cggugaccaagaAGGGUCGACc ||||||||| ugggacaggaagUCCCAGCUGa 2 11 257 278 [mm9:4:154630573-154630594:+] 0.5012 150 7 -21.07 -0.3353 MIMAT0003740 mmu-miR-674 67513 2610002J02Rik auGUGGUGAGGGUAGAGU-CACg || | | ||||||| ||| ccCAGGAGACACAUCUCAGGUGu 2 21 206 228 [mm9:4:154630522-154630544:+] 0.5012 124 0 -17.40 -0.1028 MIMAT0003741 mmu-miR-674* 67513 2610002J02Rik aacaagaCUCUACCCUCGACAc || || ||||||| aaauggaGAAAU-UGAGCUGUu 2 16 324 344 [mm9:4:154630640-154630660:+] 0.5000 145 7 -14.79 -0.7375 MIMAT0003461 mmu-miR-683 67513 2610002J02Rik cuccuguGUCGAAUGUCGUCc || || ||||||| ugcugguCA-CUGACAGCAGg 2 15 129 148 [mm9:4:154630445-154630464:+] 0.5012 148 7 -20.70 -0.1750 MIMAT0003472 mmu-miR-693-5p 67513 2610002J02Rik cuuUUGAAAGCCUACACCGAc :|| || |||||||||| accGACAUU-GGAUGUGGCUu 2 19 40 59 [mm9:4:154630356-154630375:+] 0.5012 164 7 -20.96 -0.2679 MIMAT0003487 mmu-miR-697 67513 2610002J02Rik agAGGUGUCCUGGUCCUACAa || :| || |||||||| ugUCAGCCUGA-CAGGAUGUg 2 20 180 199 [mm9:4:154630496-154630515:+] 0.5012 153 7 -17.04 -0.1495 MIMAT0004893 mmu-miR-574-5p 67513 2610002J02Rik uguGUGAGUGUGUGUGUGU-GAGu ||| || : | ||||| ||| aauCACCCA-GGAGACACAUCUCa 2 21 201 223 [mm9:4:154630517-154630539:+] 0.5012 122 0 -18.10 -0.1234 MIMAT0005843 mmu-miR-1188 67513 2610002J02Rik aggaccGGGUUGGA-GUGUGGu :| ||||| |||||| ucuccuUCAAACCUACACACCg 2 16 22 43 [mm9:4:154630338-154630359:+] 0.5013 127 6 -23.91 -0.3276 MIMAT0009397 mmu-miR-1933-3p 67513 2610002J02Rik uaUCAGUGUGACUACCAG-GACc :| ||:| || ||||| ||| uuGGACAUAAUGCUGGUCACUGa 2 21 119 141 [mm9:4:154630435-154630457:+] 0.5012 132 0 -17.00 -0.3360 MIMAT0009424 mmu-miR-1953 67513 2610002J02Rik gucUUCGGACUC-UUGAAAGGgu || ::| || :|||||| auaAAUUUUAAGUUGCUUUCC-- 3 20 456 476 [mm9:4:154630772-154630792:+] 0.5000 130 0 -9.40 -0.1597 MIMAT0009426 mmu-miR-1955 67513 2610002J02Rik uuuucgacGUCACGUA-GGACCCUGa ||| | | |||||||| accguuccCAGAGAUUACCUGGGACa 2 18 238 263 [mm9:4:154630554-154630579:+] 0.5012 152 7 -19.73 -0.2796 MIMAT0009426 mmu-miR-1955 67513 2610002J02Rik uuUUCGACGUCACGUAG--GAC-CCUGa |:|| ||| || ||| ||| |||| gcAGGCAGCACUG-AUCCUCUGUGGACu 2 24 144 170 [mm9:4:154630460-154630486:+] 0.5012 132 0 -21.44 -0.2203 MIMAT0009431 mmu-miR-1958 67513 2610002J02Rik ugaaugacgaaGGUGAAAGGau :::|||||| uaaauuuuaagUUGCUUUCC-- 3 12 457 476 [mm9:4:154630773-154630792:+] 0.5000 123 0 -7.85 -0.1582 MIMAT0009433 mmu-miR-1960 67513 2610002J02Rik ucgggagaaGAUUGUCGUGACc | ::|||||||| cacugacagCAGGCAGCACUGa 2 14 136 157 [mm9:4:154630452-154630473:+] 0.5012 149 7 -17.76 -0.1596 MIMAT0009440 mmu-miR-1967 67513 2610002J02Rik cguagaagaggggucCUAGGAGu ||||||| acagcaggcagcacuGAUCCUCu 2 9 141 163 [mm9:4:154630457-154630479:+] 0.5012 140 7 -14.93 -0.4157 MIMAT0011210 mmu-miR-2134 67513 2610002J02Rik cguggGGCAAAGGGU-UCUg ||| |||||| ||| ugaaaCCG-UUCCCAGAGAu 2 15 234 252 [mm9:4:154630550-154630568:+] 0.5012 120 0 -18.48 -0.3027 MIMAT0014852 mmu-miR-3072* 67513 2610002J02Rik ggacGGGAGGGAGCCCCAGGGa || | | :|||||||| ggcaCCGUGGCCUGGGGUCCCa 2 19 287 308 [mm9:4:154630603-154630624:+] 0.5012 154 7 -28.29 -0.2149 MIMAT0000126 mmu-miR-27b 67513 2610002J02Rik cgUCUUGA-AUCGG--UGACACUu :|:||| || |: ||||||| caGGGACUGUACCUUAACUGUGAg 2 20 427 450 [mm9:4:154630743-154630766:+] 0.5000 153 7 -19.33 -0.4236 MIMAT0000134 mmu-miR-124 67513 2610002J02Rik ccguaaGUGG-CGCACGGAAu ||:| | ||||||| -----gCAUCAGGGUGCCUUg 2 15 1 16 [mm9:4:154630317-154630332:+] 0.6028 149 7 -20.26 -0.3035 MIMAT0000148 mmu-miR-136 67513 2610002J02Rik gguAGUAGUUUUGUUUACCUCa | | |::: |||||||| gauUGAAAAGGGAAAAUGGAGa 2 20 311 332 [mm9:4:154630627-154630648:+] 0.5006 151 7 -12.47 -1.0599 MIMAT0000159 mmu-miR-149 67513 2610002J02Rik cccucacuucUGUGCCUCGGUCu || ||||||| cuguaccuuaACUGUGAGCCAGa 2 14 433 455 [mm9:4:154630749-154630771:+] 0.5000 141 7 -16.56 -1.1093 MIMAT0000237 mmu-miR-204 67513 2610002J02Rik uccguaucCUACUGUUUCCCUu ||| : ||||||| gucccacuGAUUGAAAAGGGAa 2 15 303 324 [mm9:4:154630619-154630640:+] 0.5006 150 7 -13.97 -0.7632 MIMAT0000379 mmu-miR-301a 67513 2610002J02Rik cgaaacUGUU-AUGAUAACG-UGAc |:|: |||| |||| ||| gcagccAUAGCUACUUUUGCUACUg 2 18 388 412 [mm9:4:154630704-154630728:+] 0.5000 124 0 -14.58 -0.2175 MIMAT0000529 mmu-miR-20a 67513 2610002J02Rik gaugGACGU-GAUAUUCG-UGAAAu | ||| | || ||| ||||| gcuaCGGCAGCCAU-AGCUACUUUu 2 20 382 405 [mm9:4:154630698-154630721:+] 0.5000 120 0 -16.05 -0.1181 MIMAT0000537 mmu-miR-27a 67513 2610002J02Rik cgCCUUGA-AUCGG--UGACACUu ||:||| || |: ||||||| caGGGACUGUACCUUAACUGUGAg 2 20 427 450 [mm9:4:154630743-154630766:+] 0.5000 157 7 -22.03 -0.4236 MIMAT0000540 mmu-miR-93 67513 2610002J02Rik gaugGACGUGCUUGUCG-UGAAAc | ||| |:||| ||||| gcuaCGGCAGCCAUAGCUACUUUu 2 20 382 405 [mm9:4:154630698-154630721:+] 0.5000 123 0 -17.00 -0.1193 MIMAT0000559 mmu-miR-326 67513 2610002J02Rik ugaccuccuucccGGGUCUCc ||||||| cugugaaaccguuCCCAGAGa 2 9 231 251 [mm9:4:154630547-154630567:+] 0.5012 140 7 -15.70 -0.8884 MIMAT0004642 mmu-miR-330 67513 2610002J02Rik cgGAUUCUGUGUC-CGGGUCUCu ||: || || | ||||||| gcCUGUGAAACCGUUCCCAGAGa 2 21 229 251 [mm9:4:154630545-154630567:+] 0.5012 155 7 -25.48 -0.8850 MIMAT0000582 mmu-miR-338-3p 67513 2610002J02Rik guUGUUUUAGUGACUACGACCu |: ::| || | ||||||| gcAUUGGA-CA-UAAUGCUGGu 2 21 116 135 [mm9:4:154630432-154630451:+] 0.5012 144 7 -15.99 -0.3543 MIMAT0000668 mmu-miR-211 67513 2610002J02Rik uccGUUUCCUACUGUUUCCCUu | | ||| : ||||||| gucCCACUGAUUGAAAAGGGAa 2 20 303 324 [mm9:4:154630619-154630640:+] 0.5006 151 7 -13.86 -0.7596 MIMAT0000711 mmu-miR-365 67513 2610002J02Rik uauuCCUAAA-AA-UCCCCGUAAu || ||| || | ||||||| uucuGGUUUUGUUCAUGGGCAUUg 2 19 98 121 [mm9:4:154630414-154630437:+] 0.5012 156 7 -15.05 -0.4100 MIMAT0001095 mmu-miR-370 67513 2610002J02Rik ugGUCCAAGGUGG-GGUCGUCCg | ||| |||: ||||||| ugCUGGU--CACUGACAGCAGGc 2 21 129 149 [mm9:4:154630445-154630465:+] 0.5012 148 7 -24.87 -0.3503 MIMAT0003187 mmu-miR-20b 67513 2610002J02Rik gaugGACGU-GAUACUCG-UGAAAc | ||| | || ||| ||||| gcuaCGGCAGCCAU-AGCUACUUUu 2 20 382 405 [mm9:4:154630698-154630721:+] 0.5000 120 0 -13.88 -0.1181 MIMAT0004186 mmu-miR-301b 67513 2610002J02Rik cgaaacUGUU-AUGGUAACG-UGAc |:|: |||: |||| ||| gcagccAUAGCUACUUUUGCUACUg 2 18 388 412 [mm9:4:154630704-154630728:+] 0.5000 120 0 -13.41 -0.2175 MIMAT0003729 mmu-miR-216b 67513 2610002J02Rik agUGUAAACGGACGUCUCUAAa || || || |||||||| aaACCGUU-CC--CAGAGAUUa 2 21 236 254 [mm9:4:154630552-154630570:+] 0.5012 147 7 -13.15 -0.1495

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G066859 Faap20 Mus musculus 67513

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Faap20 RAID00166481 mmu-miR-326-3p miRNA MIMAT0000559 Faap20 mRNA 67513 Prediction 0.2202 Faap20 RAID00205652 mmu-miR-338-3p miRNA MIMAT0000582 Faap20 mRNA 67513 Prediction 0.1828 Faap20 RAID00939721 mmu-miR-20b-5p miRNA MIMAT0003187 Faap20 mRNA 67513 Prediction 0.1828 Faap20 RAID01316339 mmu-miR-27a-3p miRNA MIMAT0000537 Faap20 mRNA 67513 Prediction 0.1828 Faap20 RAID01370986 mmu-miR-124-3p miRNA MIMAT0000134 Faap20 mRNA 67513 Prediction 0.1828 Faap20 RAID01427828 mmu-miR-370-3p miRNA MIMAT0001095 Faap20 mRNA 67513 Prediction 0.1828 Faap20 RAID01740177 mmu-miR-3084-5p miRNA MIMAT0014876 Faap20 mRNA 67513 Prediction 0.1828 Faap20 RAID01846922 mmu-miR-149-5p miRNA MIMAT0000159 Faap20 mRNA 67513 Prediction 0.2202 Faap20 RAID02076919 mmu-miR-365-3p miRNA MIMAT0000711 Faap20 mRNA 67513 Prediction 0.1828 Faap20 RAID02197713 mmu-miR-194-2-3p miRNA MIMAT0017073 Faap20 mRNA 67513 Prediction 0.1828 Faap20 RAID02259957 mmu-miR-3072-5p miRNA MIMAT0014852 Faap20 mRNA 67513 Prediction 0.1828 Faap20 RAID02334053 mmu-miR-301b-3p miRNA MIMAT0004186 Faap20 mRNA 67513 Prediction 0.1828 Faap20 RAID02405298 mmu-miR-136-5p miRNA MIMAT0000148 Faap20 mRNA 67513 Prediction 0.1828 Faap20 RAID02414512 mmu-miR-301a-3p miRNA MIMAT0000379 Faap20 mRNA 67513 Prediction 0.1828 Faap20 RAID02449915 mmu-miR-6926-5p miRNA MIMAT0027752 Faap20 mRNA 67513 Prediction 0.1828 Faap20 RAID02476252 mmu-miR-204-5p miRNA MIMAT0000237 Faap20 mRNA 67513 Prediction 0.1828 Faap20 RAID02558507 mmu-miR-93-5p miRNA MIMAT0000540 Faap20 mRNA 67513 Prediction 0.1828 Faap20 RAID02753689 mmu-miR-222-5p miRNA MIMAT0017061 Faap20 mRNA 67513 Prediction 0.1828 Faap20 RAID02833007 mmu-miR-20a-5p miRNA MIMAT0000529 Faap20 mRNA 67513 Prediction 0.1828 Faap20 RAID02905376 mmu-miR-216b-5p miRNA MIMAT0003729 Faap20 mRNA 67513 Prediction 0.1828 Faap20 RAID03200670 mmu-miR-7656-3p miRNA MIMAT0029819 Faap20 mRNA 67513 Prediction 0.1828 Faap20 RAID03374394 mmu-miR-7055-5p miRNA MIMAT0028014 Faap20 mRNA 67513 Prediction 0.1828 Faap20 RAID03454063 mmu-miR-330-5p miRNA MIMAT0004642 Faap20 mRNA 67513 Prediction 0.2202 Faap20 RAID03509211 mmu-miR-7662-3p miRNA MIMAT0029831 Faap20 mRNA 67513 Prediction 0.1828 Faap20 RAID03708738 mmu-miR-505-5p miRNA MIMAT0017259 Faap20 mRNA 67513 Prediction 0.1828 Faap20 RAID03841932 mmu-miR-211-5p miRNA MIMAT0000668 Faap20 mRNA 67513 Prediction 0.1828 Faap20 RAID03872468 mmu-miR-27b-3p miRNA MIMAT0000126 Faap20 mRNA 67513 Prediction 0.1828