DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Trim71; Gm1127; Lin41 ATTTA 1253-3820 4292-4296;4658-4662;5114-5118

DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT005597 mmu-miR-125a-5p Mus musculus Trim71 636931 Mus musculus qRT-PCR Non-Functional MTI (Weak) 19898466 MIRT005597 mmu-miR-125a-5p Mus musculus Trim71 636931 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT005598 mmu-miR-125b-5p Mus musculus Trim71 636931 Mus musculus qRT-PCR Non-Functional MTI (Weak) 19898466 MIRT005598 mmu-miR-125b-5p Mus musculus Trim71 636931 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT005599 mmu-miR-128-3p Mus musculus Trim71 636931 Mus musculus qRT-PCR Non-Functional MTI (Weak) 19898466 MIRT004728 mmu-let-7a-5p Mus musculus Trim71 636931 Mus musculus Flow//GFP reporter assay//Immunocytochemistry//Immunohistochemistry//Immunoprecipitaion//In situ hybridization//Northern blot//qRT-PCR//Western blot Functional MTI 19898466 MIRT004729 mmu-let-7e-5p Mus musculus Trim71 636931 Mus musculus Flow//GFP reporter assay//Immunocytochemistry//Immunohistochemistry//Immunoprecipitaion//In situ hybridization//Northern blot//qRT-PCR//Western blot Functional MTI 19898466 MIRT604585 mmu-miR-329-3p Mus musculus Trim71 636931 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT580251 mmu-miR-351-5p Mus musculus Trim71 636931 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT604578 mmu-miR-696 Mus musculus Trim71 636931 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT580250 mmu-miR-670-5p Mus musculus Trim71 636931 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871 MIRT604583 mmu-miR-188-3p Mus musculus Trim71 636931 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT604587 mmu-miR-362-3p Mus musculus Trim71 636931 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT604581 mmu-miR-466h-5p Mus musculus Trim71 636931 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT604579 mmu-miR-466j Mus musculus Trim71 636931 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT604584 mmu-miR-3057-3p Mus musculus Trim71 636931 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT604582 mmu-miR-466m-5p Mus musculus Trim71 636931 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT604580 mmu-miR-669m-5p Mus musculus Trim71 636931 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT604586 mmu-miR-466q Mus musculus Trim71 636931 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004524 mmu-miR-30b* 636931 Trim71 cuGCAUU-UGUAGGUGUAGGGUc | |:| ||| |||||||| gaCUUGACACA-AGACAUCCCAa 2 21 784 805 [mm9:9:114420958-114420979:-] 0.5329 149 7 -17.86 -0.8360 MIMAT0004530 mmu-miR-127* 636931 Trim71 uagucUCGGGA--GACUCGAAGUc ||:||| || ||||| | gccuaAGUCCUACCUCAGCUUAAa 2 18 157 180 [mm9:9:114421583-114421606:-] 0.7372 128 0 -14.07 -0.1480 MIMAT0004533 mmu-miR-141* 636931 Trim71 agGUUGUGA----CGUGACCUUC-UAc |||| :| |||||||||| || ugCAACCUUGAGGGCACUGGAAGCAUa 2 21 355 381 [mm9:9:114421382-114421408:-] 0.4897 131 0 -22.25 -0.1408 MIMAT0004540 mmu-miR-186* 636931 Trim71 ggguuuuuuaagugGAAUCCcg |||||| guuuguuauaaagaCUUAGGua 3 9 898 919 [mm9:9:114420844-114420865:-] 0.5476 120 0 -7.67 -0.1369 MIMAT0000217 mmu-miR-188-5p 636931 Trim71 gggAGGUGGUACG-UUCCCUAc | :: :| || ||||||| gggUGUGGUAGGCAAAGGGAUa 2 19 1069 1090 [mm9:9:114420673-114420694:-] 0.5748 145 7 -11.53 -0.9449 MIMAT0000218 mmu-miR-24-1* 636931 Trim71 ugAC-UAUAGUCGAGUCAUCCGUg || :|: :|: ::||||||| uaUGUGUGAGGGUGUGGUAGGCAa 2 22 1060 1083 [mm9:9:114420680-114420703:-] 0.4765 148 7 -16.65 -0.1814 MIMAT0000230 mmu-miR-199a-3p 636931 Trim71 auugguuacacgUCUGAUGAca | |||||| aaggaaacccaaAAACUACUaa 3 11 414 435 [mm9:9:114421328-114421349:-] 0.5690 122 0 -7.16 -0.1056 MIMAT0004546 mmu-miR-202-5p 636931 Trim71 uuucuucauauacgUAUCCUu |||||| aagauguuggaaagAUAGGAu 2 8 453 473 [mm9:9:114421290-114421310:-] 0.5238 120 6 -8.90 -0.1071 MIMAT0000240 mmu-miR-207 636931 Trim71 cucccuccucucggucCUCUUCg |||||| acuacuaaguaaaaaaGAGAAGu 2 8 428 450 [mm9:9:114421313-114421335:-] 0.5464 120 6 -8.81 -0.1225 MIMAT0000367 mmu-miR-291a-5p 636931 Trim71 ucUCUCCCGGAGGUGAAACUAc | |||| : :||||||| gcAAAGGG--AUAGCUUUGAUu 2 21 1080 1099 [mm9:9:114420664-114420683:-] 0.5748 145 7 -14.93 -0.3319 MIMAT0000367 mmu-miR-291a-5p 636931 Trim71 ucuCUCCCGGAGGUGAAAC-UAc |:| |:||| ||||| || uucGGGUGUCUCAUCUUUGUAUc 2 20 670 692 [mm9:9:114421071-114421093:-] 0.6429 127 0 -16.08 -0.4990 MIMAT0004574 mmu-miR-294* 636931 Trim71 ucUAUCC--CGGAGGUAAAAC-UCa :|:|| || | ||||||| || ugGUGGGGUGCAUGCAUUUUGUAGa 2 21 382 406 [mm9:9:114421357-114421381:-] 0.5690 127 0 -20.42 -0.6468 MIMAT0004575 mmu-miR-295* 636931 Trim71 cuucacaCGGGGUGUAAACUCa ||:::: ||||||| agggauaGCUUUG-AUUUGAGa 2 16 1084 1104 [mm9:9:114420659-114420679:-] 0.5748 145 7 -10.49 -0.6237 MIMAT0004579 mmu-miR-302a* 636931 Trim71 cguucauguuggugcAAAUUCa |||||| uauuauuuuuuuuuuUUUAAGa 2 8 119 140 [mm9:9:114421623-114421644:-] 0.4708 120 6 -2.31 -0.1319 MIMAT0004583 mmu-miR-130b* 636931 Trim71 ucaucacguugucccUUUCUCa |||||| aaacuacuaaguaaaAAAGAGa 2 8 426 447 [mm9:9:114421316-114421337:-] 0.5464 120 6 -6.94 -0.1308 MIMAT0004625 mmu-miR-16* 636931 Trim71 agucgucgugucagUUAUGACc ||||||| uuuguguucuugagAAUACUGu 2 9 497 518 [mm9:9:114421245-114421266:-] 0.5238 140 7 -11.85 -0.3287 MIMAT0004629 mmu-miR-22* 636931 Trim71 auuucGAACGGUGACUUCUUGa :|| :: :| |||||| uauuuUUUUUUUUUUAAGAACa 2 18 122 143 [mm9:9:114421620-114421641:-] 0.6040 121 6 -5.20 -0.3240 MIMAT0005440 mmu-miR-24-2* 636931 Trim71 ugACAAAGUCGAGUCAUCCGUg ||| :|: ::||||||| ugUGUGAGGGUGUGGUAGGCAa 2 21 1062 1083 [mm9:9:114420680-114420701:-] 0.5748 152 7 -17.41 -0.3005 MIMAT0004630 mmu-miR-26b* 636931 Trim71 cucgguucauuaccUCUUGUcc |||||| uuuuuuuuuuuuuaAGAACAaa 3 9 124 145 [mm9:9:114421618-114421639:-] 0.6040 120 0 -6.37 -0.1903 MIMAT0000569 mmu-miR-330* 636931 Trim71 agagacguccgggacACGAAACg ||||||| cacaauguuuuuuccUGCUUUGg 2 9 1107 1129 [mm9:9:114420634-114420656:-] 0.5748 140 7 -12.82 -0.3182 MIMAT0004656 mmu-miR-345-3p 636931 Trim71 caGAGGUCUGGG-GAUCAAGUCc :||| | ::: ||||||| uuUUCCUGCUUUGGAAGUUCAGg 2 21 1116 1138 [mm9:9:114420625-114420647:-] 0.5748 143 7 -21.22 -0.3806 MIMAT0000605 mmu-miR-350 636931 Trim71 cuUUCACAUACCCGAAACA-CUu ::||| ||| :||||| || ugGGGUGCAUGCAUUUUGUAGAu 2 21 385 407 [mm9:9:114421356-114421378:-] 0.5690 128 0 -13.24 -0.3455 MIMAT0004667 mmu-miR-199b 636931 Trim71 auugguuacacgUCUGAUGAca | |||||| aaggaaacccaaAAACUACUaa 3 11 414 435 [mm9:9:114421328-114421349:-] 0.5690 122 0 -7.16 -0.1056 MIMAT0004691 mmu-miR-382* 636931 Trim71 uuuuucacaacaggcACUUACu |||||| uuuuuuuuuuacagaUGAAUGu 2 8 193 214 [mm9:9:114421549-114421570:-] 0.7372 120 6 -5.99 -0.1472 MIMAT0001090 mmu-miR-409-3p 636931 Trim71 uccccaaguggcucGUUGUAAg ||||||| uaagaacaaaaguaCAACAUUg 2 9 136 157 [mm9:9:114421606-114421627:-] 0.6040 140 7 -8.24 -0.8315 MIMAT0002104 mmu-miR-463* 636931 Trim71 uacuaccUGUUGUUUAAUCCAu |:|| :| |||||| guuuguuAUAAAGACUUAGGUa 2 16 898 919 [mm9:9:114420844-114420865:-] 0.5476 127 6 -8.57 -0.1626 MIMAT0004758 mmu-miR-463 636931 Trim71 gaUGGAAUAUACCACAGA-UAGu |: || | ||||||| ||| ucAUAUUUUCGGGUGUCUCAUCu 2 21 663 685 [mm9:9:114421078-114421100:-] 0.6429 128 0 -16.19 -0.4503 MIMAT0004760 mmu-miR-470* 636931 Trim71 agAAGAGUCUUUCCAUGAC-CAa ||||:: :|| ||||| || ugUUCUUGAGAA--UACUGUGUu 2 21 501 521 [mm9:9:114421242-114421262:-] 0.5238 121 0 -14.16 -0.6424 MIMAT0004781 mmu-miR-532-3p 636931 Trim71 acgUUCGGAACC-CACACCCUCc ||| | || ||||||||| aagAAGGGUGGGUGUGUGGGAGu 2 20 698 720 [mm9:9:114421043-114421065:-] 0.4595 162 7 -22.76 -0.1331 MIMAT0003127 mmu-miR-484 636931 Trim71 uaGCCCUCCCCUGACUCGGACu :| | ||| :|||||||| ucUGUGCAGGGCUUGAGCCUGu 2 21 223 244 [mm9:9:114421519-114421540:-] 0.7372 160 7 -24.16 -0.8371 MIMAT0003186 mmu-miR-369-3p 636931 Trim71 uuucuaguugguacAUAAUAa |||||| ccccccuuuauuuuUAUUAUu 2 8 105 125 [mm9:9:114421638-114421658:-] 0.4708 120 6 -3.27 -0.1230 MIMAT0003189 mmu-miR-291b-5p 636931 Trim71 ccUCUCCCGGAGGUGAAACUAg | |||| : :||||||| gcAAAGGG--AUAGCUUUGAUu 2 21 1080 1099 [mm9:9:114420664-114420683:-] 0.5748 145 7 -16.27 -0.3319 MIMAT0003189 mmu-miR-291b-5p 636931 Trim71 ccuCUCCCGGAGGUGAAAC-UAg |:| |:||| ||||| || uucGGGUGUCUCAUCUUUGUAUc 2 20 670 692 [mm9:9:114421071-114421093:-] 0.6429 127 0 -18.67 -0.4990 MIMAT0003728 mmu-miR-374* 636931 Trim71 gagccUGUUACUAUUAUGUUGg | || | |:|||||| uuuuaAGAACAAAAGUACAACa 2 18 133 154 [mm9:9:114421609-114421630:-] 0.6040 137 6 -9.94 -0.2149 MIMAT0003736 mmu-miR-670 636931 Trim71 aaguggUGUAUGUGAGUCCCUa | || |||||||| aagaagAAAUCGUCUCAGGGAu 2 17 66 87 [mm9:9:114421676-114421697:-] 0.4823 148 7 -17.85 -0.3586 MIMAT0003736 mmu-miR-670 636931 Trim71 aaGUGGUGUAUGUGAGUCCCUa ::|: :: | ::||||||| ccUGCUUUGGAAGUUCAGGGAa 2 21 1120 1141 [mm9:9:114420622-114420643:-] 0.5748 148 7 -14.16 -0.9330 MIMAT0014816 mmu-miR-3099 636931 Trim71 agggguuggaGAGAGAUCGGAu ||: ||||||| auggcuguggCUUGCUAGCCUa 2 13 627 648 [mm9:9:114421115-114421136:-] 0.6429 148 7 -18.38 -0.4362 MIMAT0003739 mmu-miR-673-5p 636931 Trim71 gagguUCCUGGUCUC-GACACUc |||:|: ||| |||||| ugugcAGGGCUUGAGCCUGUGAa 2 18 225 247 [mm9:9:114421516-114421538:-] 0.7372 133 6 -21.16 -0.5810 MIMAT0003740 mmu-miR-674 636931 Trim71 auguGGUGA-GGGUAGAGUCACg :| || :::| ||||||| cuuuUCUCUGUUUACCUCAGUGu 2 19 579 601 [mm9:9:114421162-114421184:-] 0.6235 149 7 -15.03 -0.2918 MIMAT0003449 mmu-miR-488* 636931 Trim71 aacucucacGAUA-AUAGACCc || | ||||||| gugucucauCUUUGUAUCUGGu 2 13 675 696 [mm9:9:114421067-114421088:-] 0.5512 143 7 -10.76 -0.4484 MIMAT0003471 mmu-miR-692 636931 Trim71 cucacuccgcgagUUUCUCUa ||||||| acuacuaaguaaaAAAGAGAa 2 9 428 448 [mm9:9:114421315-114421335:-] 0.5464 140 7 -7.39 -1.1885 MIMAT0003472 mmu-miR-693-5p 636931 Trim71 cuUUUGAAAGCCUACACCGAc ::| | :|| ||||||| uaGGAGAUAUGGCUGUGGCUu 2 20 619 639 [mm9:9:114421124-114421144:-] 0.6429 151 7 -18.78 -0.1537 MIMAT0004189 mmu-miR-693-3p 636931 Trim71 aaugucgguguagacUUUCGACg ||||||| cuuugcuugaggagaAAAGCUGg 2 9 762 784 [mm9:9:114420979-114421001:-] 0.5329 140 7 -10.61 -0.2453 MIMAT0003496 mmu-miR-706 636931 Trim71 aaaaAACUCUGUCC---CAAAGAGa |||: |||| ||||||| acccUUGGCUCAGGUCUGUUUCUCa 2 19 1183 1207 [mm9:9:114420556-114420580:-] 0.5452 153 7 -16.62 -0.4786 MIMAT0003507 mmu-miR-500 636931 Trim71 acUUGGGAACGGGUCCACGUAa |:| : || : :||||||| gaAGCAUAUGGUGGGGUGCAUg 2 21 374 395 [mm9:9:114421368-114421389:-] 0.5294 152 7 -17.43 -0.1250 MIMAT0003508 mmu-miR-501-5p 636931 Trim71 aaagugggucccUGUUUCCUAa ::||||||| aggccuuugaauGUAAAGGAUu 2 11 1275 1296 [mm9:9:114420467-114420488:-] 0.5519 142 7 -13.54 -0.6667 MIMAT0003509 mmu-miR-501-3p 636931 Trim71 guUUAGGA-ACGGGCCCACGUAa || | | || : |||||||| ggAAGCAUAUGGUGGGGUGCAUg 2 21 373 395 [mm9:9:114421368-114421390:-] 0.5294 155 7 -17.21 -0.1250 MIMAT0003510 mmu-miR-717 636931 Trim71 ucUCUUCCA--UAGAGACAGACUc :||| || | :||||||| agGGAAUGUAGAAGAUUGUCUGAc 2 21 1136 1159 [mm9:9:114420604-114420627:-] 0.5748 147 7 -18.53 -0.2768 MIMAT0003510 mmu-miR-717 636931 Trim71 ucucuuccauagAGACAGACUc | ||||||| uguuuaccucagUGUGUCUGAc 2 11 587 608 [mm9:9:114421155-114421176:-] 0.6235 142 7 -11.17 -0.3742 MIMAT0004236 mmu-miR-741 636931 Trim71 agAUGUAUCUUACCGUAG-AGAGu | || |||| | ||| |||| auUUCAAAGAA-GAAAUCGUCUCa 2 22 60 82 [mm9:9:114421681-114421703:-] 0.4760 123 0 -13.82 -0.5578 MIMAT0004238 mmu-miR-743a 636931 Trim71 agaUGAGUCGAACCACAGAAAg || |||: | ||||||| aggACACAGUAU-AUGUCUUUu 2 20 1326 1346 [mm9:9:114420417-114420437:-] 0.5167 153 7 -12.32 -1.0263 MIMAT0004840 mmu-miR-743b-3p 636931 Trim71 agauaaGUCGUACUACAGAAAg |||:|| |||||||| aggacaCAGUAU-AUGUCUUUu 2 17 1326 1346 [mm9:9:114420417-114420437:-] 0.5167 162 7 -17.58 -1.0235 MIMAT0004842 mmu-miR-879 636931 Trim71 ccgaaucucgauaUUCGGAGa ||||||| uucccucucuggcAAGCCUCu 2 9 281 301 [mm9:9:114421462-114421482:-] 0.6135 140 7 -14.90 -0.1468 MIMAT0004845 mmu-miR-881* 636931 Trim71 ucuacACUGACAAU-AGA-GAGAc ||| ||| | ||| |||| acagaUGAAUGUAAUUCUCCUCUg 2 18 203 226 [mm9:9:114421537-114421560:-] 0.7372 124 0 -17.95 -0.9994 MIMAT0004846 mmu-miR-881 636931 Trim71 agauaagucuuUUCUGUGUCAa |:|||||||| acaggaaguguAGGACACAGUa 2 12 1315 1336 [mm9:9:114420427-114420448:-] 0.5167 151 7 -19.06 -0.6504 MIMAT0004848 mmu-miR-883a-5p 636931 Trim71 cauugacgaugaagaGAGUCGu |||||| uugccuaaguccuacCUCAGCu 2 8 155 176 [mm9:9:114421587-114421608:-] 0.7372 120 6 -13.06 -0.3168 MIMAT0004867 mmu-miR-327 636931 Trim71 uaggaguacggGGAGUUCa ||||||| guggaggcagaCCUCAAGg 2 9 1228 1246 [mm9:9:114420517-114420535:-] 0.5157 140 7 -14.26 -0.1364 MIMAT0004870 mmu-miR-453 636931 Trim71 acGUUC-GAGUGAUACUCCGU-UGGa :||| || | |: |||||| ||| ccUAAGUCUGAGUG-GAGGCAGACCu 2 23 1217 1241 [mm9:9:114420522-114420546:-] 0.5157 127 0 -20.60 -0.1730 MIMAT0004934 mmu-miR-872 636931 Trim71 ggACUUGAUUGUUC-AUUGGAa | |: ||:||| |||||| uaUAAGAAAAUAAGUUAACCUu 2 20 918 939 [mm9:9:114420824-114420845:-] 0.5476 127 6 -13.66 -0.4020 MIMAT0004938 mmu-miR-875-3p 636931 Trim71 guaucggagucauAAAAGUCc ||||||| gagagagaggggcUUUUCAGa 2 9 947 967 [mm9:9:114420796-114420816:-] 0.5476 140 7 -7.80 -0.1458 MIMAT0004938 mmu-miR-875-3p 636931 Trim71 guAUCGGAGUC---AUAAA-AGUCc | | ||||| |:||| |||| ccUUGGCUCAGGUCUGUUUCUCAGg 2 20 1185 1209 [mm9:9:114420554-114420578:-] 0.5452 122 0 -17.34 -0.2464 MIMAT0005830 mmu-miR-466l 636931 Trim71 uuauacacacguACAUAAAUau | |||||| uuuuaauuuuauUUUAUUUAa- 3 11 1352 1372 [mm9:9:114420391-114420411:-] 0.5424 122 0 -0.35 -0.5180 MIMAT0005833 mmu-miR-669d 636931 Trim71 uguAUAUGUACGUGUGUGUUCa |: || || ||||||| agcUGGACUUG---ACACAAGa 2 20 779 797 [mm9:9:114420966-114420984:-] 0.5329 143 7 -11.59 -0.4365 MIMAT0005847 mmu-miR-1190 636931 Trim71 cugucuccccuUGGAGUCGAcu ||||||||| gccuaaguccuACCUCAGCUua 3 12 157 178 [mm9:9:114421585-114421606:-] 0.7372 135 0 -15.70 -0.3083 MIMAT0005853 mmu-miR-669e 636931 Trim71 uaCUUGUACGUGUGUGUUCUGu |:|| || ||||||||| cuGGACUUG---ACACAAGACa 2 21 781 799 [mm9:9:114420964-114420982:-] 0.5329 156 7 -20.18 -0.4136 MIMAT0005857 mmu-miR-1196 636931 Trim71 ucCGUCUCCGU---CCAUCUAAa |:: | ||| ||||||| ggGUGCAUGCAUUUUGUAGAUUg 2 19 387 409 [mm9:9:114421354-114421376:-] 0.5690 141 7 -10.99 -0.6392 MIMAT0007863 mmu-miR-1902 636931 Trim71 uuCAGUACGGAUGA----CGUGGAGa ||| || ||: | ||||||| uuGUC-UGACUGGUGGGAGCACCUCa 2 21 1151 1175 [mm9:9:114420588-114420612:-] 0.5748 145 7 -17.76 -0.4277 MIMAT0007866 mmu-miR-1905 636931 Trim71 gauggcgcACCACCCUGACCAc | || ||||||| guagaagaUUGUCUGACUGGUg 2 15 1143 1164 [mm9:9:114420599-114420620:-] 0.5748 146 7 -17.07 -0.1777 MIMAT0007871 mmu-miR-1892 636931 Trim71 uagGAGGGAGGGCAGGGGUUUa | || |:|| ||||||| aagCCCCGUUCCUCCCCCAAAg 2 20 1255 1276 [mm9:9:114420487-114420508:-] 0.5338 159 7 -25.07 -0.1632 MIMAT0007873 mmu-miR-1896 636931 Trim71 gagGAGUGG-GUGGUAGUCUCUc :| ||| :::: ||||||| aagUUAACCUUGUUCUCAGAGAg 2 20 929 951 [mm9:9:114420812-114420834:-] 0.5476 150 7 -22.94 -0.1425 MIMAT0009398 mmu-miR-1934 636931 Trim71 ucuccugcuUCGUCCCCUGGUCu || | ||||||| gggcuuuucAGAUGUGGACCAGg 2 15 956 978 [mm9:9:114420785-114420807:-] 0.5476 146 7 -21.23 -0.2390 MIMAT0009398 mmu-miR-1934 636931 Trim71 ucuccUGCUUCGUCCCCUG-GUCu | ||||:: |||| ||| ccaacAGGAAGUGUAGGACACAGu 2 19 1312 1335 [mm9:9:114420428-114420451:-] 0.5167 122 0 -16.03 -0.7122 MIMAT0009415 mmu-miR-1948 636931 Trim71 gaCAUGCUCACGAGACGGAUUu |||| | | :||||||| aaGUACAA---CAUUGCCUAAg 2 21 145 163 [mm9:9:114421600-114421618:-] 0.7372 148 7 -14.60 -1.0988 MIMAT0009416 mmu-miR-1949 636931 Trim71 uugauacgacuguaggaCCAUAUc |||||| uuuguuauaaagacuuaGGUAUAa 2 8 899 922 [mm9:9:114420841-114420864:-] 0.5476 120 6 -8.67 -0.1078 MIMAT0009432 mmu-miR-1959 636931 Trim71 gaggugacucgaUGUAGGGg ||||||| acuugacacaagACAUCCCa 2 9 785 804 [mm9:9:114420959-114420978:-] 0.5329 140 7 -17.61 -0.6861 MIMAT0009434 mmu-miR-1961 636931 Trim71 aaGAUUGAUGAUGGAGu |||| | ||||||| gcCUAAGUCCUACCUCa 2 16 157 173 [mm9:9:114421590-114421606:-] 0.7372 159 7 -17.47 -1.1925 MIMAT0009434 mmu-miR-1961 636931 Trim71 aagauuGAU-GAUGGAGu ||| ||||||| uaauuuCUAUCUACCUCa 2 12 252 269 [mm9:9:114421494-114421511:-] 0.7372 146 7 -16.68 -1.2605 MIMAT0009442 mmu-miR-1969 636931 Trim71 uggGUACAAUUUCAGAG-GUAGAa :|| || ::|| || ||||| ucaUAUUUUCGGGUGUCUCAUCUu 2 21 663 686 [mm9:9:114421077-114421100:-] 0.6429 128 0 -13.78 -0.5213 MIMAT0009456 mmu-miR-1839-5p 636931 Trim71 guuCUGGACAAGAUAGAUGGAa ||: |||||||||||| aguGAUAAUUUCUAUCUACCUc 2 20 247 268 [mm9:9:114421495-114421516:-] 0.7372 167 7 -19.67 -1.0324 MIMAT0009456 mmu-miR-1839-5p 636931 Trim71 guucuggacaagauaGAUGGAa |||||| aacauugccuaagucCUACCUc 2 8 151 172 [mm9:9:114421591-114421612:-] 0.7372 120 6 -13.91 -0.1974 MIMAT0009461 mmu-miR-1982.2 636931 Trim71 gacacccuCUUGUAUCCCACu | :: ||||||| gguuuucuGUGUUUAGGGUGu 2 14 14 34 [mm9:9:114421729-114421749:-] 0.4760 141 7 -17.41 -0.5963 MIMAT0011211 mmu-miR-2135 636931 Trim71 caaagccgggguUCUGGAGa ||||||| cugaguggaggcAGACCUCa 2 9 1224 1243 [mm9:9:114420520-114420539:-] 0.5157 140 7 -15.92 -0.1667 MIMAT0012772 mmu-miR-599 636931 Trim71 caaaCUAUUUG-ACUGUGUu | |::|| ||||||| aaaaGCUGGACUUGACACAa 2 16 776 795 [mm9:9:114420968-114420987:-] 0.5329 150 7 -15.09 -0.5759 MIMAT0012774 mmu-miR-664 636931 Trim71 auccgaccccucaUUUACUUAu |:|||||| uuuuuuuuuuuacAGAUGAAUg 2 10 192 213 [mm9:9:114421550-114421571:-] 0.7372 129 6 -7.39 -0.2816 MIMAT0015645 mmu-miR-3473 636931 Trim71 ccGACUCGGUAGAG-AGGu |||| |||||| ||| guCUGA--CAUCUCAUCCc 2 17 602 618 [mm9:9:114421145-114421161:-] 0.6235 121 0 -16.25 -0.5543 MIMAT0015646 mmu-miR-3474 636931 Trim71 cuUAGG-UGCAGAGGAGGG-UCCc :||: || |||| |||| ||| guGUCUGACAUCUCAUCCCUAGGa 2 21 600 623 [mm9:9:114421140-114421163:-] 0.6332 131 0 -20.39 -0.8284 MIMAT0000121 mmu-let-7g 636931 Trim71 uugacauGUUUGAUGAUGGAGu | || | ||||||| acauugcCUAAGUCCUACCUCa 2 16 152 173 [mm9:9:114421590-114421611:-] 0.7372 151 7 -17.23 -1.1958 MIMAT0000121 mmu-let-7g 636931 Trim71 uugaCA-UGUU--UGAU-GAUGGAGu || |:|| ||| ||||||| ugaaGUGAUAAUUUCUAUCUACCUCa 2 19 244 269 [mm9:9:114421494-114421519:-] 0.7372 147 7 -19.38 -1.2627 MIMAT0000122 mmu-let-7i 636931 Trim71 uuguCGUGUUUGAUGAUGGAGu || | || | ||||||| cauuGC-CUAAGUCCUACCUCa 2 19 153 173 [mm9:9:114421590-114421610:-] 0.7372 152 7 -16.15 -1.1958 MIMAT0000122 mmu-let-7i 636931 Trim71 uugUCG-UGUU--UGAU-GAUGGAGu ||: |:|| ||| ||||||| ugaAGUGAUAAUUUCUAUCUACCUCa 2 20 244 269 [mm9:9:114421494-114421519:-] 0.7372 148 7 -19.14 -1.2637 MIMAT0000125 mmu-miR-23b 636931 Trim71 ccaUUAGGGACCGUUACA-CUa || ::| || ||||| || uggAAGUUCAGGGAAUGUAGAa 2 19 1127 1148 [mm9:9:114420615-114420636:-] 0.5748 122 0 -16.15 -0.5242 MIMAT0000128 mmu-miR-30a 636931 Trim71 gaaggucagcuccuACAAAUGu ||||||| acagggcuuuucucUGUUUACc 2 9 573 594 [mm9:9:114421169-114421190:-] 0.6235 140 7 -9.94 -0.3284 MIMAT0000130 mmu-miR-30b 636931 Trim71 ucgacucacauccuACAAAUGu ||||||| acagggcuuuucucUGUUUACc 2 9 573 594 [mm9:9:114421169-114421190:-] 0.6235 140 7 -8.31 -0.3284 MIMAT0000135 mmu-miR-125a-5p 636931 Trim71 agUGUCCAAUUUCCCAGAGUCCCu | || ||| ||||||||| ucAAAGAAGAAAUCGUCUCAGGGa 2 23 63 86 [mm9:9:114421677-114421700:-] 0.4880 162 7 -23.29 -0.8738 MIMAT0000136 mmu-miR-125b-5p 636931 Trim71 agUGUUCAAUCCCAGAGUCCCu | ||| | ||||||||| aaAGAAGAAAUCGUCUCAGGGa 2 21 65 86 [mm9:9:114421677-114421698:-] 0.4880 160 7 -21.40 -0.8773 MIMAT0000142 mmu-miR-9 636931 Trim71 agUAUGUCGAUCU-AUUG-GUUUCu | || | ||: |||| ||||| gcAGACCUCAAGGUUAACACAAAGc 2 22 1234 1258 [mm9:9:114420505-114420529:-] 0.5157 124 0 -13.23 -0.1069 MIMAT0000147 mmu-miR-135a 636931 Trim71 aguguAUCCUUAUUUUUCGGUAu | | : | |||||||| cauguUUGUGUUUCAAAGCCAUc 2 19 740 762 [mm9:9:114421001-114421023:-] 0.5033 146 7 -10.63 -0.4300 MIMAT0000156 mmu-miR-144 636931 Trim71 ucauguaguagaUAUGACAu ||||||| guguucuugagaAUACUGUg 2 9 500 519 [mm9:9:114421244-114421263:-] 0.5238 140 7 -9.43 -0.4758 MIMAT0000210 mmu-miR-181a 636931 Trim71 ugAGUGGCUGUC--GCAACUUACAa || || | || | |||||||| ccUCCCCCAAAGGCCUUUGAAUGUa 2 22 1265 1289 [mm9:9:114420474-114420498:-] 0.5519 160 7 -15.46 -0.8598 MIMAT0000210 mmu-miR-181a 636931 Trim71 ugAGUGGCUGUCGCAACUUACAa |: :: ||| | ||||||| uuUUUUUUACA--GAUGAAUGUa 2 22 195 215 [mm9:9:114421548-114421568:-] 0.7372 146 7 -11.47 -1.2750 MIMAT0000215 mmu-miR-186 636931 Trim71 ucGGGUUUUCCUCUUAAGAAAc ||: |: | ||||:||| uaCCUCAGCUUA-AAUUUUUUu 2 21 167 187 [mm9:9:114421576-114421596:-] 0.7372 130 0 -7.54 -0.1065 MIMAT0000235 mmu-miR-202-3p 636931 Trim71 agaaggguacgcgauAUGGAGa |||||| acauugccuaaguccUACCUCa 2 8 152 173 [mm9:9:114421590-114421611:-] 0.7372 120 6 -13.14 -0.2010 MIMAT0000235 mmu-miR-202-3p 636931 Trim71 agaaggguacgcgauAUGGAGa |||||| gugauaauuucuaucUACCUCa 2 8 248 269 [mm9:9:114421494-114421515:-] 0.7372 120 6 -10.81 -0.2014 MIMAT0000237 mmu-miR-204 636931 Trim71 ucCGUAUCCUACUGUUUCCCUu |::|:| | |:|||||||| ggGUGUGGUA-GGCAAAGGGAu 2 21 1069 1089 [mm9:9:114420674-114420694:-] 0.5748 162 7 -22.74 -0.3180 MIMAT0000248 mmu-miR-30e 636931 Trim71 gaaggucaguuccuACAAAUGu ||||||| acagggcuuuucucUGUUUACc 2 9 573 594 [mm9:9:114421169-114421190:-] 0.6235 140 7 -10.53 -0.3284 MIMAT0000383 mmu-let-7d 636931 Trim71 uugauacguuGGAU-GAUGGAGa :||| ||||||| agugauaauuUCUAUCUACCUCa 2 13 247 269 [mm9:9:114421494-114421516:-] 0.7372 147 7 -16.15 -1.2637 MIMAT0000383 mmu-let-7d 636931 Trim71 uugauAC-GUUGGAUGAUGGAGa || | | | ||||||| aacauUGCCUAAGUCCUACCUCa 2 18 151 173 [mm9:9:114421590-114421612:-] 0.7372 144 7 -15.24 -1.1958 MIMAT0000514 mmu-miR-30c 636931 Trim71 cgacUCUC-ACAUCCUACAAAUGu ||:| | | ||||||| caacAGGGCUUUUCUCUGUUUACc 2 20 571 594 [mm9:9:114421169-114421192:-] 0.6235 142 7 -9.60 -0.3284 MIMAT0000515 mmu-miR-30d 636931 Trim71 gaaggucagccccuACAAAUGu ||||||| acagggcuuuucucUGUUUACc 2 9 573 594 [mm9:9:114421169-114421190:-] 0.6235 140 7 -9.44 -0.3284 MIMAT0000518 mmu-miR-196a 636931 Trim71 ggGUUGUUGUACUUUGAUGGAu ::|:||: | | |||||| agUGAUAAUUUCUAUCUACCUc 2 21 247 268 [mm9:9:114421495-114421516:-] 0.7372 128 6 -10.56 -0.1029 MIMAT0000521 mmu-let-7a 636931 Trim71 uugaUAUGUUGGAU-GAUGGAGu ||| :||| ||||||| agugAUAAUUUCUAUCUACCUCa 2 19 247 269 [mm9:9:114421494-114421516:-] 0.7372 153 7 -18.93 -1.2627 MIMAT0000521 mmu-let-7a 636931 Trim71 uuGAUAUGUUGGAU----GAUGGAGu | | |: :|||| ||||||| uaCAACAUUGCCUAAGUCCUACCUCa 2 21 148 173 [mm9:9:114421590-114421615:-] 0.7372 147 7 -18.66 -1.1974 MIMAT0000522 mmu-let-7b 636931 Trim71 uuGGUGUGUUGGAU----GAUGGAGu | |||: :|||| ||||||| uaCAACAUUGCCUAAGUCCUACCUCa 2 21 148 173 [mm9:9:114421590-114421615:-] 0.7372 155 7 -22.71 -1.1958 MIMAT0000522 mmu-let-7b 636931 Trim71 uuggugUGUU--GGAU-GAUGGAGu |:|| :||| ||||||| gaagugAUAAUUUCUAUCUACCUCa 2 17 245 269 [mm9:9:114421494-114421518:-] 0.7372 150 7 -20.45 -1.2627 MIMAT0000523 mmu-let-7c 636931 Trim71 uuggUAUGUUGGAU-GAUGGAGu ||| :||| ||||||| agugAUAAUUUCUAUCUACCUCa 2 19 247 269 [mm9:9:114421494-114421516:-] 0.7372 153 7 -19.59 -1.2627 MIMAT0000523 mmu-let-7c 636931 Trim71 uuGGUAUGUUGGAU----GAUGGAGu | | |: :|||| ||||||| uaCAACAUUGCCUAAGUCCUACCUCa 2 21 148 173 [mm9:9:114421590-114421615:-] 0.7372 147 7 -20.34 -1.1974 MIMAT0000524 mmu-let-7e 636931 Trim71 uugauauGUUGGAGGAUGGAGu | | ||||||||| acauugcCUAAGUCCUACCUCa 2 16 152 173 [mm9:9:114421590-114421611:-] 0.7372 151 7 -20.01 -1.1974 MIMAT0000524 mmu-let-7e 636931 Trim71 uugauaUGUUGGAG---GAUGGAGu |:||::|| ||||||| gaagugAUAAUUUCUAUCUACCUCa 2 17 245 269 [mm9:9:114421494-114421518:-] 0.7372 151 7 -19.17 -1.2627 MIMAT0000525 mmu-let-7f 636931 Trim71 uugaUAUGUUAGAU-GAUGGAGu ||| |||| ||||||| agugAUAAUUUCUAUCUACCUCa 2 19 247 269 [mm9:9:114421494-114421516:-] 0.7372 157 7 -18.84 -1.2616 MIMAT0000525 mmu-let-7f 636931 Trim71 uugauAUGUUAGAUGAUGGAGu || |:|| ||||||| uugccUA-AGUC--CUACCUCa 2 18 155 173 [mm9:9:114421590-114421608:-] 0.7372 144 7 -15.00 -1.1844 MIMAT0000532 mmu-miR-23a 636931 Trim71 ccUUUAGGGACCGUUACA-CUa :|| ::| || ||||| || ugGAAGUUCAGGGAAUGUAGAa 2 20 1127 1148 [mm9:9:114420615-114420636:-] 0.5748 123 0 -20.53 -0.5242 MIMAT0000545 mmu-miR-98 636931 Trim71 uugUUA-UGUUGA--AU-GAUGGAGu |:| |:||:| || ||||||| ugaAGUGAUAAUUUCUAUCUACCUCa 2 20 244 269 [mm9:9:114421494-114421519:-] 0.7372 152 7 -17.94 -1.2627 MIMAT0000545 mmu-miR-98 636931 Trim71 uuGUUAU-GUUGAAUGAUGGAGu || |: | | | ||||||| aaCAUUGCCUAAGUCCUACCUCa 2 21 151 173 [mm9:9:114421590-114421612:-] 0.7372 147 7 -15.76 -1.1974 MIMAT0000590 mmu-miR-342-3p 636931 Trim71 ugcccacgcuAAAGACACACUCu | | |||||||| ggaccucgucUCUAUGUGUGAGg 2 14 1048 1070 [mm9:9:114420693-114420715:-] 0.4765 149 7 -17.42 -0.1923 MIMAT0000597 mmu-miR-346 636931 Trim71 ucUCCGUCCGUGAGC-CCGUCUGu || | | | | | ||||||| uaAGUCUG--AGUGGAGGCAGACc 2 22 1219 1240 [mm9:9:114420523-114420544:-] 0.5157 141 7 -16.52 -0.1916 MIMAT0000609 mmu-miR-351 636931 Trim71 guccGAGUUUC--C---CGAGGAGUCCCu :|||||| | | :||||||| gaauUUCAAAGAAGAAAUCGUCUCAGGGa 2 21 58 86 [mm9:9:114421677-114421705:-] 0.4880 146 7 -23.25 -0.8738 MIMAT0000612 mmu-miR-135b 636931 Trim71 aguguAUCCUUACUUUUCGGUAu | | : | |||||||| cauguUUGUGUUUCAAAGCCAUc 2 19 740 762 [mm9:9:114421001-114421023:-] 0.5033 146 7 -12.26 -0.4300 MIMAT0000663 mmu-miR-218 636931 Trim71 uguACCAAUCUAGUUCGUGUu || || || ||||||| cuuUGAUUUGA-GAAGCACAa 2 19 1092 1111 [mm9:9:114420652-114420671:-] 0.5748 152 7 -11.00 -0.6327 MIMAT0000666 mmu-miR-320 636931 Trim71 agcgggAGAGUUGGGUCGAAaa || :| |:|||||| ccuaagUCCUACCUCAGCUUaa 3 17 158 179 [mm9:9:114421584-114421605:-] 0.7372 136 0 -17.65 -0.4219 MIMAT0000668 mmu-miR-211 636931 Trim71 uccguuuCCUACUGUUUCCCUu || |:|||||||| aggguguGGUAGGCAAAGGGAu 2 16 1068 1089 [mm9:9:114420674-114420695:-] 0.5748 155 7 -22.27 -0.3207 MIMAT0000673 mmu-miR-181b 636931 Trim71 uggguggcUGUCGUUACUUACAa |||| |||||||| uuuuuuuuACAG--AUGAAUGUa 2 16 195 215 [mm9:9:114421548-114421568:-] 0.7372 152 7 -11.61 -1.2750 MIMAT0000673 mmu-miR-181b 636931 Trim71 ugGGUGGCUGUC-GUUACUUACAa || || | :| | ||||||| cuCCCCCAAAGGCCUUUGAAUGUa 2 22 1266 1289 [mm9:9:114420474-114420497:-] 0.5519 152 7 -18.55 -0.8598 MIMAT0000674 mmu-miR-181c 636931 Trim71 ugAGUGGCUGUCC---AACUUACAa || || | ||| |||||||| ccUCCCCCAAAGGCCUUUGAAUGUa 2 21 1265 1289 [mm9:9:114420474-114420498:-] 0.5519 159 7 -16.96 -0.8632 MIMAT0000674 mmu-miR-181c 636931 Trim71 ugAGUGGCUGUCCAACUUACAa |: :: ||| | ||||||| uuUUUUUUACA-GAUGAAUGUa 2 21 195 215 [mm9:9:114421548-114421568:-] 0.7372 150 7 -10.78 -1.2769 MIMAT0000739 mmu-miR-375 636931 Trim71 agugcgcucggcuugCUUGUUu |||||| uuuuuuuuuuuuuaaGAACAAa 2 8 124 145 [mm9:9:114421618-114421639:-] 0.6040 120 6 -7.87 -0.2749 MIMAT0000743 mmu-miR-379 636931 Trim71 ggaUGCAA-GGUAUCA-GAUGGu || || || ||| ||||| acaACAUUGCCUAAGUCCUACCu 2 19 149 171 [mm9:9:114421592-114421614:-] 0.7372 121 0 -12.29 -1.0873 MIMAT0004745 mmu-miR-384-5p 636931 Trim71 uguaacggauccuuaACAAAUGu ||||||| aacagggcuuuucucUGUUUACc 2 9 572 594 [mm9:9:114421169-114421191:-] 0.6235 140 7 -13.70 -0.3284 MIMAT0001076 mmu-miR-384-3p 636931 Trim71 uaacaCUUGUUAAAGA-UCCUUa |: | :||||| ||||| gcucaGGUCUGUUUCUCAGGAAc 2 18 1190 1212 [mm9:9:114420551-114420573:-] 0.5157 125 0 -11.59 -0.1464 MIMAT0001081 mmu-miR-196b 636931 Trim71 ggguuguuguccuuuGAUGGAu |||||| aacauugccuaagucCUACCUc 2 8 151 172 [mm9:9:114421591-114421612:-] 0.7372 120 6 -10.12 -0.1993 MIMAT0001081 mmu-miR-196b 636931 Trim71 ggguuguuguccuuuGAUGGAu |||||| agugauaauuucuauCUACCUc 2 8 247 268 [mm9:9:114421495-114421516:-] 0.7372 120 6 -10.56 -0.1039 MIMAT0001546 mmu-miR-450a-5p 636931 Trim71 uauaaucCUUGUGU-AGCGUUUu ||| ::: ||||||| cuagguuGAAAGUGUUCGCAAAg 2 16 853 875 [mm9:9:114420888-114420910:-] 0.5329 146 7 -12.58 -0.4006 MIMAT0003112 mmu-miR-489 636931 Trim71 cgACGGUAUAUACACCACA-GUAa | |::|:| | ||||| ||| uuUUCUGUGUUUAGGGUGUGCAUg 2 22 16 39 [mm9:9:114421724-114421747:-] 0.4760 125 0 -12.89 -0.1849 MIMAT0003168 mmu-miR-543 636931 Trim71 uucuucACGUGGC-GCUUACAaa | :|| | :|||||| uuuuuuUUUACAGAUGAAUGUaa 3 17 194 216 [mm9:9:114421547-114421569:-] 0.7372 127 0 -8.37 -0.2163 MIMAT0003727 mmu-miR-374 636931 Trim71 gugaaucguccAACAUAAUAua || |||||| ccccccuuuauUUUUAUUAUuu 3 12 105 126 [mm9:9:114421637-114421658:-] 0.4708 127 0 -1.04 -0.1090 MIMAT0003730 mmu-miR-592 636931 Trim71 uguaguagcguauAACUGUGUUa ||||||||| agaaaagcuggacUUGACACAAg 2 11 774 796 [mm9:9:114420967-114420989:-] 0.5329 150 7 -11.59 -0.3496 MIMAT0003456 mmu-miR-495 636931 Trim71 uucuucacgugguACAAACAAa |||||||| ucuguguuuuuguUGUUUGUUa 2 10 884 905 [mm9:9:114420858-114420879:-] 0.5403 145 7 -10.54 -1.0839 MIMAT0004324 mmu-miR-181d 636931 Trim71 uggguggcuguUGU-UACUUACAa ||| |||||||| uuuuuuuuuuuACAGAUGAAUGUa 2 13 192 215 [mm9:9:114421548-114421571:-] 0.7372 151 7 -10.04 -1.2760 MIMAT0004324 mmu-miR-181d 636931 Trim71 ugGGUGGCUGUU-GUUACUUACAa || || | :: | ||||||| cuCCCCCAAAGGCCUUUGAAUGUa 2 22 1266 1289 [mm9:9:114420474-114420497:-] 0.5519 148 7 -17.73 -0.8632 MIMAT0004847 mmu-miR-882 636931 Trim71 ugaUUACGC-GAUUG-AGAG-AGGa |:||:| ||:|| |||| ||| cucAGUGUGUCUGACAUCUCAUCCc 2 20 594 618 [mm9:9:114421145-114421169:-] 0.6235 129 0 -21.78 -0.5687 MIMAT0004896 mmu-miR-590-3p 636931 Trim71 ugaUCGAAUAUGUAUUUUAAu || | : |: ||||||| gaaAGAUAGGAUUUAAAAUUc 2 19 462 482 [mm9:9:114421281-114421301:-] 0.5238 150 7 -3.55 -0.9158 MIMAT0005850 mmu-miR-1192 636931 Trim71 uuAAACCAGACAAACAAACAAa | || |:| ||||||||| ucUGUGUUUUUGUUGUUUGUUa 2 21 884 905 [mm9:9:114420858-114420879:-] 0.5403 164 7 -11.78 -1.0814

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G065340 Trim71 Mus musculus 636931

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Trim71 mmu-miR-204 beg:1072 end:1089 pic:3' TCCGTATCCTACTGTTTCCCTT 5'& ||.| |.|||||||| &5' -GGTA------GGCAAAGGGA- 3' Trim71 mmu-miR-218 beg:1093 end:1112 pic:3' TGTACCAATCTAG----TTCGTGTT 5'& |||. |||||||| &5' ---------GATTTGAGAAGCACAA 3' Trim71 mmu-miR-188-5p beg:1077 end:1090 pic:3' GGGAGGTGGTACG-TTCCCTAC 5'& || ||||||| &5' -----------GCAAAGGGAT- 3' Trim71 mmu-miR-669d beg:779 end:797 pic:3' TGTATATGTACGTG---TGTGTTCA 5'& .| || || ||||||| &5' ------GC-TGGACTTGACACAAG- 3' Trim71 mmu-miR-1959 beg:788 end:804 pic:3' GAGGTGACTCGATGTAGGGG 5'& ||| ||||||| &5' ---CACAAG---ACATCCC- 3' Trim71 mmu-miR-2135 beg:1230 end:1243 pic:3' CAAAGCCGGGGTTCTGGAGA 5'& ||| ||||||| &5' -----GGC----AGACCTC- 3' Trim71 mmu-miR-345-3p beg:1121 end:1139 pic:3' CAGAGGTCTGGGGATCAAGTCC 5'& ||. || |||||||| &5' --CTTTGGA-----AGTTCAGG 3' Trim71 mmu-let-7b beg:146 end:174 pic:3' TTGGTGTGTTGGAT----GATGGAGT 5'& || |||. .|||| |||||||| &5' -ACAACATTGCCTAAGTCCTACCTCA 3' Trim71 mmu-let-7f beg:148 end:174 pic:3' TTGATATG---TTAGATGATGGAGT 5'& ||| |.| |.|| |||||||| &5' AACATTGCCTAAGTC--CTACCTCA 3' Trim71 mmu-let-7c beg:150 end:174 pic:3' TTGGTATGTTGGAT----GATGGAGT 5'& ||| .|||| |||||||| &5' ---CATT--GCCTAAGTCCTACCTCA 3' Trim71 mmu-miR-1961 beg:156 end:174 pic:3' AAGATTGATGATGGAGT 5'& |||| | |||||||| &5' --CTAAGTCCTACCTCA 3' Trim71 mmu-let-7g beg:243 end:270 pic:3' TTGACATGTTT--GAT-GATGGAGT 5'& || || |.|| ||| |||||||| &5' AAGTG-ATAATTTCTATCTACCTCA 3' Trim71 mmu-let-7i beg:244 end:270 pic:3' TTGTCG-TGTTT--GAT-GATGGAGT 5'& ||. |.|| ||| |||||||| &5' ---AGTGATAATTTCTATCTACCTCA 3' Trim71 mmu-miR-98 beg:244 end:270 pic:3' TTGTTATGTT-GAATGATGGAGT 5'& |. ||| || |||||||| &5' AGTGATAATTTCTATCTACCTCA 3' Trim71 mmu-let-7b beg:246 end:270 pic:3' TTGGTGTGTTGGAT-GATGGAGT 5'& . |.| .||| |||||||| &5' --TGATAATTTCTATCTACCTCA 3' Trim71 mmu-let-7c beg:246 end:270 pic:3' TTGGTATGTTGGAT-GATGGAGT 5'& . ||| .||| |||||||| &5' --TGATAATTTCTATCTACCTCA 3' Trim71 mmu-let-7a beg:248 end:270 pic:3' TTGATATGTTGGAT-GATGGAGT 5'& ||| .||| |||||||| &5' ----ATAATTTCTATCTACCTCA 3' Trim71 mmu-let-7e beg:248 end:270 pic:3' TTGATATGTTGGAG---GATGGAGT 5'& |.||..|| |||||||| &5' ------ATAATTTCTATCTACCTCA 3' Trim71 mmu-let-7f beg:248 end:270 pic:3' TTGATATGTTAGAT-GATGGAGT 5'& ||| |||| |||||||| &5' ----ATAATTTCTATCTACCTCA 3' Trim71 mmu-miR-1961 beg:253 end:270 pic:3' AAGATTGATGATGGAGT 5'& ||||| |||||||| &5' TTCTAT---CTACCTCA 3' Trim71 mmu-let-7e beg:587 end:598 pic:3' TTGATATGTTGGAGGATGGAGT 5'& ..||||||| &5' -------------TTTACCTCA 3' Trim71 mmu-let-7a beg:588 end:598 pic:3' TTGATATGTTGGATGATGGAGT 5'& .||||||| &5' --------------TTACCTCA 3' Trim71 mmu-let-7c beg:588 end:598 pic:3' TTGGTATGTTGGATGATGGAGT 5'& .||||||| &5' --------------TTACCTCA 3' Trim71 mmu-miR-295star beg:1088 end:1104 pic:3' CTTCACACGGGGTGTAAACTCA 5'& ||. . ||||||| &5' -------GCTTTG-ATTTGAG- 3' Trim71 mmu-miR-714 beg:1039 end:1058 pic:3' CGCTGGCTGGCCG--GGAGCAGC 5'& |.| || ||||||| &5' ------GGCGGGGGACCTCGTC- 3' Trim71 mmu-let-7d beg:154 end:173 pic:3' TTGATACGTTGGAT----GATGGAGA 5'& .|||| ||||||| &5' ---------GCCTAAGTCCTACCTC- 3' Trim71 mmu-miR-98 beg:163 end:174 pic:3' TTGTTATGTTGAATGATGGAGT 5'& |||||||| &5' --------------CTACCTCA 3' Trim71 mmu-let-7d beg:254 end:269 pic:3' TTGATACGTTGGAT-GATGGAGA 5'& .||| ||||||| &5' ----------TCTATCTACCTC- 3' Trim71 mmu-miR-3099 beg:634 end:649 pic:3' AGGGGTTGGAGAGAGATCGGAT 5'& || |||||||| &5' ----------CTTGCTAGCCTA 3' Trim71 mmu-miR-125b-5p beg:74 end:87 pic:3' AGTGTTCAATCCCAGAGTCCCT 5'& |||||||||| &5' ------------GTCTCAGGGA 3' Trim71 mmu-miR-291a-5p beg:1081 end:1099 pic:3' TCTCTCCCGGAGGTGAAACTAC 5'& |||| .||||||| &5' ----AGGGATA--GCTTTGAT- 3' Trim71 mmu-miR-291b-5p beg:1081 end:1100 pic:3' CCTCTCCCGGAGGTGAAACTAG 5'& |||| .|||||||. &5' ----AGGGATA--GCTTTGATT 3' Trim71 mmu-miR-592 beg:777 end:796 pic:3' TGTAGTAGCGTAT--AACTGTGTTA 5'& || ||||||||| &5' --------GCTGGACTTGACACAA- 3' Trim71 mmu-miR-212 beg:1024 end:1036 pic:3' ACCGGCACTGACCTCTGACAAT 5'& || ||||||| &5' -----------GG-GACTGTT- 3' Trim71 mmu-miR-484 beg:228 end:244 pic:3' TAGCCCTCCCCTGACTCGGACT 5'& ||| .|||||||| &5' --------GGGCTTGAGCCTG- 3' Trim71 mmu-miR-696 beg:722 end:737 pic:3' GGGTGTCGTTCGTGTGCG 5'& |.. |||||||| &5' ------GTGTGCACACGC 3' Trim71 mmu-miR-342-5p beg:1009 end:1020 pic:3' GAGTTAGTGTCTATCGTGGGGA 5'& .||||||| &5' -------------GGCACCCC- 3' Trim71 mmu-miR-207 beg:990 end:1010 pic:3' CTCCCTCCTCTCGGTCCTCTTCG 5'& |||.|| ||. |||||||. &5' --GGGGGGT--GCT-GGAGAAGT 3' Trim71 mmu-miR-501-3p beg:379 end:395 pic:3' GTTTAGGAACGGGCCCACGTAA 5'& || . |||||||| &5' --------TGGTGGGGTGCAT- 3' Trim71 mmu-miR-362-3p beg:700 end:715 pic:3' ACTTAGGAACTTGTCCACACAA 5'& |.. ||||||| &5' ---------GGGTGGGTGTGT- 3' Trim71 mmu-miR-532-3p beg:1150 end:1169 pic:3' ACGTTCGGAACCCACACCCTCC 5'& |.|| ||||||| &5' -----GTCTGACTGGTGGGAG- 3' Trim71 mcmv-miR-m01-3star beg:1252 end:1269 pic:3' CGGCACTTCGCTCGCAAGGAGC 5'& |||| |||||||| &5' ------AAGCCC-CGTTCCTC- 3' Trim71 mmu-miR-495 beg:886 end:905 pic:3' TTCTTCACGTGGT--ACAAACAAA 5'& |||. |||||||| &5' -----GTGTTTTTGTTGTTTGTT- 3' Trim71 mcmv-miR-m01-1 beg:205 end:226 pic:3' GGCAAGC-TGCAATAAGAGGAGA 5'& .| |.|| |||||||||| &5' -----TGAATGTAATTCTCCTCT 3' Trim71 mcmv-miR-m21-1 beg:1206 end:1221 pic:3' GCCGAACTTGCACAGGGGATA 5'& |||| |.||||| &5' ------GAACC--TTCCCTA- 3' Trim71 mcmv-miR-m88-1 beg:1045 end:1068 pic:3' TCTGGGGCTGTAGCTGAAGAC 5'& .||||.|| | || |. | || &5' GGACCTCGTC-TCTATGTGTG 3' Trim71 mghv-miR-M1-1 beg:242 end:261 pic:3' TTTCCTTCATGCCGGTAAAGAT 5'& |||||. ||||||| &5' ----GAAGTGATA--ATTTCTA 3' Trim71 mghv-miR-M1-5 beg:257 end:275 pic:3' CTCTGCTGGGCTAGAGTTGAGA 5'& |.|. ||||||||| &5' ------ATCTAC-CTCAACTCT 3' Trim71 mmu-let-7bstar beg:522 end:543 pic:3' CCCTTCCGTCATCCAACATATC 5'& | .||. ||||||||.|. &5' -GTGGGGT--TAGGTTGTGTG- 3' Trim71 mmu-let-7f beg:580 end:598 pic:3' TTGATATGTTAGAT---GATGGAGT 5'& ||| .||||||| &5' ----------TCTCTGTTTACCTCA 3' Trim71 mmu-let-7g beg:583 end:598 pic:3' TTGACATGTTTGATGATGGAGT 5'& |||| .||||||| &5' --CTGT--------TTACCTCA 3' Trim71 mmu-let-7g beg:144 end:174 pic:3' TTGACATGTT-TGATG--------ATGGAGT 5'& |||||| |.|.| ||||||| &5' ----GTACAACATTGCCTAAGTCCTACCTCA 3' Trim71 mmu-let-7gstar beg:225 end:250 pic:3' CGTTCCGTCAC-CGGACATGTCA 5'& |||.||| || ||||||. ||| &5' GCAGGGCT-TGAGCCTGTGAAGT 3' Trim71 mmu-miR-106a beg:387 end:403 pic:3' GATGGACGTGACAATCGTGAAAC 5'& ||||. |||.|||| &5' -----TGCAT-----GCATTTTG 3' Trim71 mmu-miR-106b beg:382 end:403 pic:3' TAGACGTGACAGT-CGTGAAAT 5'& || . || || |||.|||. &5' ---TGGGGTG-CATGCATTTTG 3' Trim71 mmu-miR-106bstar beg:585 end:603 pic:3' CGTCGTTCATGGGTGTCACGCC 5'& |. ||||. |||||.| &5' ---GTT--TACCT-CAGTGTG- 3' Trim71 mmu-miR-1192 beg:878 end:905 pic:3' TTAAAC-CAGACA-------AACAAACAAA 5'& | |||||| ||||||||| &5' -----GTGTCTGTGTTTTTGTTGTTTGTT- 3' Trim71 mmu-miR-125a-3p beg:1199 end:1220 pic:3' CCGAGGGTTCTTGGAGTGGACA 5'& .||.||.|||||| ||| &5' --TTCTCAGGAACCTTCCCT-- 3' Trim71 mmu-miR-125a-5p beg:1125 end:1141 pic:3' AGTGTCCAATTTCCCA-GAGTCCCT 5'& || .||||||| &5' ------------GGAAGTTCAGGGA 3' Trim71 mmu-miR-125b-5p beg:1125 end:1141 pic:3' AGTGTTCAATCCCA-GAGTCCCT 5'& || .||||||| &5' ----------GGAAGTTCAGGGA 3' Trim71 mmu-miR-129-5p beg:407 end:429 pic:3' CGTTCGGGTC---TGGCGTTTTTC 5'& .|||| || ||| |||||| &5' --GAGCCAAGGAAACC-CAAAAA- 3' Trim71 mmu-miR-130a beg:262 end:282 pic:3' TACGGGAAAATTGT--AACGTGAC 5'& ||| ||| |||||.| &5' ----CCTC--AACTCTTTGCATT- 3' Trim71 mmu-miR-130b beg:262 end:282 pic:3' TACGGGAAAGTAGTAACGTGAC 5'& ||| || |||||.| &5' ----CCTCAACTCTTTGCATT- 3' Trim71 mmu-miR-130bstar beg:936 end:956 pic:3' TCATCACGTT-GTCCCTTTCTCA 5'& ||. ||| ||.|||| &5' -----TGTTCTCAGAGAGAGAG- 3' Trim71 mmu-miR-132 beg:1016 end:1036 pic:3' GCTGGTACCGACATCTGACAAT 5'& ||| .||||||| &5' ---CCACATCAG-GGACTGTT- 3' Trim71 mmu-miR-139-3p beg:1040 end:1062 pic:3' GAGGTTGTCCC--GGCGCAGAGGT 5'& ..|.||| || ||||||.| &5' ----GGCGGGGGACCTCGTCTCTA 3' Trim71 mmu-miR-1 beg:267 end:284 pic:3' TATGTATGAAGAAATGTAAGGT 5'& || |||||.||||.| &5' ------AC-TCTTTGCATTTC- 3' Trim71 mmu-miR-143 beg:591 end:615 pic:3' CTCGATGTCACGAA----GTAGAGT 5'& || |||||. ||||||| &5' ---CT-CAGTGTGTCTGACATCTCA 3' Trim71 mmu-miR-143 beg:671 end:687 pic:3' CTCGATGTCACGAAGTAGAGT 5'& .||| ||||||. &5' -------GGTGTCTCATCTT- 3' Trim71 mmu-miR-145 beg:358 end:376 pic:3' TCCCTAAGGAC-CCTTTTGACCTG 5'& |.|| ||. |||||| &5' -------CTTGAGGGC-ACTGGA- 3' Trim71 mmu-miR-145star beg:1190 end:1212 pic:3' GTTCTTGTC---ATAAAG-GTCCTTA 5'& ||| |.|||| |||||| &5' ------CAGGTCTGTTTCTCAGGAA- 3' Trim71 mmu-miR-154 beg:1075 end:1095 pic:3' GCTTCCGTTGTGCCTATTGGAT 5'& | |||||| | |||||.|.| &5' -GTAGGCAA-AGGGATAGCTT- 3' Trim71 mmu-miR-17 beg:387 end:403 pic:3' GATGGACGTGACATTCGTGAAAC 5'& ||||. |||.|||| &5' -----TGCAT-----GCATTTTG 3' Trim71 mmu-miR-181a beg:200 end:215 pic:3' TGAGTGGCTGTCGCAACTTACAA 5'& |||| ||||||| &5' --------ACAGA--TGAATGT- 3' Trim71 mmu-miR-181a beg:1268 end:1289 pic:3' TGAGTGGCTGTCGC-AACTTACAA 5'& || .|| |||||||| &5' -----CCAAAGGCCTTTGAATGT- 3' Trim71 mmu-miR-181b beg:200 end:215 pic:3' TGGGTGGCTGTCGTTACTTACAA 5'& |||| |||||||| &5' --------ACAG--ATGAATGT- 3' Trim71 mmu-miR-181b beg:1267 end:1289 pic:3' TGGGTGGCTGTCGTT-ACTTACAA 5'& ||| || .|| ||||||| &5' -CCC-CCAAAGGCCTTTGAATGT- 3' Trim71 mmu-miR-181c beg:1269 end:1289 pic:3' TGAGTGGCTGTCCAACTTACAA 5'& || |.| |||||||| &5' ---CAAAGGCCT-TTGAATGT- 3' Trim71 mmu-miR-181d beg:1267 end:1289 pic:3' TGGGTGGCTGTTGTTACTTACAA 5'& |||| |.| | ||||||| &5' -CCCAAAGGC--CTTTGAATGT- 3' Trim71 mmu-miR-1839-5p beg:247 end:268 pic:3' GTTCTGGACAAGATAGATGGAA 5'& ||. |||||||||||| &5' ---GATAATTTCTATCTACCT- 3' Trim71 mmu-miR-188-3p beg:706 end:719 pic:3' ACGTTTGGGACGTACACCCTC 5'& |..|||||||| &5' ----------GTGTGTGGGAG 3' Trim71 mmu-miR-188-3p beg:507 end:531 pic:3' ACGTTTGGGACG--TACACCCTC 5'& | ||. ||. |||||||. &5' -GAATACTGTGTTTATGTGGGG- 3' Trim71 mmu-miR-188-5p beg:215 end:238 pic:3' GGGAGGTGGTACGTTCCCTAC 5'& .|||| |..||||.|| || &5' -TCTCCTCTGTGCAGGGCTTG 3' Trim71 mmu-miR-1892 beg:307 end:329 pic:3' TAGGAGGGAGGGCAGGGGTTTA 5'& ||||| |.|||| |||. ||. &5' ATCCT-CTTCCC-TCCTGAAG- 3' Trim71 mmu-miR-1892 beg:1255 end:1276 pic:3' TAGGAGGGAGGGCAGGGGTTTA 5'& || || |.|| ||||||| &5' --CC-CCGTTCCTCCCCCAAA- 3' Trim71 mmu-miR-1896 beg:933 end:952 pic:3' GAGGAGTGGGTGGTAGTCTCTC 5'& ||| ..| |||||||| &5' --CCTTGTTC----TCAGAGAG 3' Trim71 mmu-miR-1896 beg:1011 end:1031 pic:3' GAGGAGTGGGTG-GTAGTCTCTC 5'& ||||| | ||||||.|| &5' -----CACCCCCACATCAGGGA- 3' Trim71 mmu-miR-1929 beg:633 end:652 pic:3' GAGACGAGATATTTCAGGATCTT 5'& |||. || ||||||| &5' ----GCTTGCT--AG-CCTAGAA 3' Trim71 mmu-miR-1929 beg:317 end:337 pic:3' GAGACGAGATATTTCAGGATCTT 5'& ||| ||.| |||||.| &5' -----CTCCTGAAGG-CCTAGGA 3' Trim71 mmu-miR-1930 beg:1219 end:1235 pic:3' TGC-GACGTCCATGATACCTCCA 5'& | ||| .|||||| &5' --GTCTGA-------GTGGAGG- 3' Trim71 mmu-miR-1941-5p beg:268 end:287 pic:3' TTCGGAGACATGGTCGTAGAGGGA 5'& |||| ||||.||||| &5' ----CTCTTT----GCATTTCCCT 3' Trim71 mmu-miR-194 beg:881 end:908 pic:3' AGGTGTACCT-CAAC-GACAATGT 5'& || ..| |||| .|||||.| &5' TCTGTGTTTTTGTTGTTTGTTATA 3' Trim71 mmu-miR-1948 beg:628 end:651 pic:3' GACATGCTCACGAGACGGATTT 5'& ||||. | |||| |||||.| &5' CTGTG-GCTTGCTA-GCCTAGA 3' Trim71 mmu-miR-1954 beg:569 end:590 pic:3' TTGTCCCAGAGT-GAGACGTCA 5'& ||||||| ||. |||||. &5' AACAGGG-CTTTTCTCTGT--- 3' Trim71 mmu-miR-1959 beg:295 end:316 pic:3' GAGGTGACTCGA-TGTAGGGG 5'& || || .||| ||||||.| &5' --CCTCTTGGCTCACATCCTC 3' Trim71 mmu-miR-1960 beg:357 end:375 pic:3' TCGGGAGAAGATTGTCGTGACC 5'& |||. .| .||||||| &5' ---CCTT----GAGGGCACTGG 3' Trim71 mmu-miR-1961 beg:582 end:598 pic:3' AAGATTGATGATGGAGT 5'& |||. .||||||| &5' -TCTGT---TTACCTCA 3' Trim71 mmu-miR-1969 beg:245 end:264 pic:3' TGGGTACAATTTCAGAGGTAGAA 5'& .|| ||| |.||.|||| &5' ----GTGATAA--TTTCTATCT- 3' Trim71 mmu-miR-1970 beg:774 end:795 pic:3' GTTTCGGATAGGGGTCACTGTGT 5'& |||||. |. ||||||| &5' -AAAGCTGGA-CT---TGACACA 3' Trim71 mmu-miR-1971 beg:1263 end:1284 pic:3' AGAGTCGGG--TCGGAAATG 5'& ||| || .||||||. &5' -CTCCCCCAAAGGCCTTTG- 3' Trim71 mmu-miR-1981 beg:1267 end:1284 pic:3' CGGTGCAGATTCGGG---TCGGAAATG 5'& ||| .||||||. &5' ------------CCCAAAGGCCTTTG- 3' Trim71 mmu-miR-1982star beg:1198 end:1219 pic:3' GGAGGGGTCC-TGGGAGGGTT 5'& .|.|.|||| |||.|||| &5' -TTTCTCAGGAACCTTCCC-- 3' Trim71 mmu-miR-199a-5p beg:363 end:375 pic:3' CTTGTCCATCAGACTTGTGACCC 5'& |..|||||| &5' -------------GGGCACTGG- 3' Trim71 mmu-miR-20astar beg:1129 end:1147 pic:3' GAAATTCACGAG-CA-TTACGTCA 5'& |.|| | ||||.|| &5' --------GTTCAGGGAATGTAG- 3' Trim71 mmu-miR-211 beg:1066 end:1089 pic:3' TCCGTTTCCTACTGTTTCCCTT 5'& .||.. || |.|||||||| &5' GGGTGT-GGTAGGCAAAGGGA- 3' Trim71 mmu-miR-2135 beg:1260 end:1283 pic:3' CAAAGCC-GGGG-TTCTGGAGA 5'& ||| |||| |||.|||.| &5' --TTCCTCCCCCAAAGGCCTTT 3' Trim71 mmu-miR-2135 beg:1038 end:1055 pic:3' CAAAGCCGGGGTTCTGGAGA 5'& || | ..|||||| &5' -----GGGCGGGGGACCTC- 3' Trim71 mmu-miR-214 beg:732 end:754 pic:3' TG-ACGGACAGACACGGACGACA 5'& .| ||| |||.||||..| | &5' GCGTGCATGTTTGTGTTT-C--- 3' Trim71 mmu-miR-215 beg:862 end:880 pic:3' CAGACAGTTTAGTATCCAGTA 5'& |||. || ||||.| &5' ---TGTTCG--CAAAGGTTA- 3' Trim71 mmu-miR-218 beg:325 end:342 pic:3' TGTACCA-ATCTAGTTCGTGTT 5'& || |||. |.||||| &5' ----GGCCTAGG--AGGCACA- 3' Trim71 mmu-miR-2182 beg:702 end:729 pic:3' GCG-CCGCAC-CCTTTACAC-CGCA 5'& |. ||.||| ||.|.|||| |.|| &5' -GTGGGTGTGTGGGAGTGTGTGTGT 3' Trim71 mmu-miR-27a beg:225 end:248 pic:3' CGCCTTGAA-TCGGTGACACTT 5'& || |..||| |||| |||||| &5' GCAGGGCTTGAGCC--TGTGAA 3' Trim71 mmu-miR-297astar beg:709 end:729 pic:3' ATACCCATACACACATACATAT 5'& |.|||| .|||||||.|| &5' TGTGGGAGTGTGTGTGTG---- 3' Trim71 mmu-miR-297b-3p beg:709 end:729 pic:3' ATACCCATACACACATACATAT 5'& |.|||| .|||||||.|| &5' TGTGGGAGTGTGTGTGTG---- 3' Trim71 mmu-miR-297cstar beg:702 end:728 pic:3' ATACCCATACACA--CATACATAT 5'& .|||||.|||| ||.|||.|. &5' -GTGGGTGTGTGGGAGTGTGTGTG 3' Trim71 mmu-miR-29astar beg:54 end:77 pic:3' GACTTGTGGT--TTTCTTTAGTCA 5'& ||||. .|| .|||||||| &5' -TGAATTTCAAAGAAGAAATC--- 3' Trim71 mmu-miR-324-5p beg:374 end:393 pic:3' TGTGGTTACGGG-ATC-CCCTACGC 5'& || |.| |||.||| &5' --------GCATATGGTGGGGTGC- 3' Trim71 mmu-miR-324-5p beg:970 end:1001 pic:3' TGTGGT--TACGGG------ATCCCCTACGC 5'& |||| .|||| |.||||.||| &5' --ACCAGGGTGCCACAGAAGTGGGGGGTGC- 3' Trim71 mmu-miR-329 beg:695 end:715 pic:3' TTTTTCCAATCGACCCACACAA 5'& ||.|||| ||||||||| &5' AAGAAGGG----TGGGTGTGT- 3' Trim71 mmu-miR-330star beg:1109 end:1129 pic:3' AGAGACGTCC-GGGACACGAAACG 5'& ||. .|| ||||||| &5' ----TGTTTTTTCC--TGCTTTG- 3' Trim71 mmu-miR-330star beg:220 end:245 pic:3' AGAGACGTCCGGGACACGAAACG 5'& ||| |||||| |.|| || ||. &5' TCTGTGCAGGGCTTGAGCC-TGT 3' Trim71 mmu-miR-335-5p beg:483 end:510 pic:3' TGTAAAAA-GCAATA--ACGAGAACT 5'& ||| .|| ||.|||||| &5' --ATTGTAGTGTATTTGTGTTCTTGA 3' Trim71 mmu-miR-335-5p beg:877 end:896 pic:3' TGTAAAAAGCAATA--ACGAGAACT 5'& ||| ||.|.||| &5' --------CGTGTCTGTGTTTTTG- 3' Trim71 mmu-miR-338-3p beg:443 end:464 pic:3' GTTGTTTTAGTGACTACGACCT 5'& .||.| ||||.|||| &5' ----GAAGTATAAGATGTTGGA 3' Trim71 mmu-miR-340-5p beg:674 end:691 pic:3' TTAGTCAGAGTAACGAAATATT 5'& ||||||| ||||.|| &5' -----GTCTCAT--CTTTGTA- 3' Trim71 mmu-miR-342-3p beg:700 end:719 pic:3' TGCCCACGCTAAAGACACACTCT 5'& ||||| | ||||||.|| &5' --GGGTGGG-----TGTGTGGGA 3' Trim71 mmu-miR-344 beg:838 end:860 pic:3' TGTC-AGTCC-GAAACCGATCTAGT 5'& .|| ||||| || ||||.|. &5' -TAGCTCAGGACT----CTAGGTT- 3' Trim71 mmu-miR-345-5p beg:511 end:535 pic:3' TTCGTGACCTGAT----CCCCAGTCG 5'& .|||| .| |||||.|| &5' ---TACTGTGTTTATGTGGGGTTAG- 3' Trim71 mmu-miR-3473 beg:626 end:647 pic:3' CCGAC-TCGGTAGAGAGGT 5'& ||||| .||. || || &5' GGCTGTGGCTTGCTAGCC- 3' Trim71 mmu-miR-3474 beg:1190 end:1210 pic:3' CTTAGGTGCAGA-GGAGGGTCCC 5'& .|| |||| ..||.|||| &5' ----TCAGGTCTGTTTCTCAGG- 3' Trim71 mmu-miR-3474 beg:72 end:86 pic:3' CTTAGGTGCAGAGGAGGGTCCC 5'& || ||.||||| &5' -----------TCGTCTCAGGG 3' Trim71 mmu-miR-351 beg:1120 end:1141 pic:3' GTCCGAGTTTCCCGAGGAGTCCCT 5'& |||. || .||||||| &5' ---GCTTT---GGAAGTTCAGGGA 3' Trim71 mmu-miR-351 beg:65 end:87 pic:3' GTCCGAGTTTCCCGA--GGAGTCCCT 5'& .||| .|||||||| &5' -------GAAGAAATCGTCTCAGGGA 3' Trim71 mmu-miR-361 beg:0 end:23 pic:3' CAT-GGGGACCTCT-AAGACTATT 5'& ||. |..||||.| ||||| &5' GTGTCTTCTGGGGTTTTCTG---- 3' Trim71 mmu-miR-362-5p beg:74 end:88 pic:3' TAAGTGTGGATCCAAGGTTCCTAA 5'& || ||.|||| &5' ------------GTCTCAGGGAT- 3' Trim71 mmu-miR-376c beg:876 end:892 pic:3' TGCACTTTAAAGGAGATACAA 5'& ||||| |||.|||| &5' ACGTG--------TCTGTGTT 3' Trim71 mmu-miR-376c beg:8 end:27 pic:3' TGCACTTTAAAGGAGATACAA 5'& || .||| |||.|||| &5' ---TGGGGTTT--TCTGTGTT 3' Trim71 mmu-miR-377 beg:696 end:717 pic:3' TGTTTTCAACGGAAACACACTA 5'& |.||| |. ||||||. &5' --AGAAGG-GTGGGTGTGTGG- 3' Trim71 mmu-miR-378star beg:1190 end:1211 pic:3' TGTGTCCTGGACCTC-AGTCCTC 5'& | |||| .||| |||||| &5' -CTCAGG-TCTGTTTCTCAGGA- 3' Trim71 mmu-miR-384-5p beg:575 end:594 pic:3' TGTAACGGATCCTTAACAAATGT 5'& ||.| ||||||| &5' -----GCTTTTCTC-TGTTTAC- 3' Trim71 mmu-miR-431 beg:780 end:800 pic:3' ACGTACTGCC-GGAC---GTTCTGT 5'& || |.|| ||||||| &5' --------GGACTTGACACAAGACA 3' Trim71 mmu-miR-449b beg:143 end:160 pic:3' CGGTCGATTGTTGTGACGGA 5'& ||. ||||||.||||| &5' ---AGT--ACAACATTGCCT 3' Trim71 mmu-miR-450a-3p beg:1279 end:1302 pic:3' TACTTACGTTTCGTAGGGGTTA 5'& ||||||.|||| ||. ||| &5' -TGAATGTAAAGGATTTACAA- 3' Trim71 mmu-miR-450a-3p beg:599 end:622 pic:3' TACTTAC-GTTTCGTAGGGGTTA 5'& .|| || || ||||||.|. &5' GTGTCTGACATCTCATCCCTAG- 3' Trim71 mmu-miR-450b-3p beg:803 end:823 pic:3' TACGTACGTTTTAC-AAGGGTTA 5'& ||||| ||||||.| &5' ------GCAAATTTCTTCCCAGT 3' Trim71 mmu-miR-450b-3p beg:790 end:806 pic:3' TACGTACGTTTTACAAGGGTTA 5'& |||.| |||||| &5' -------CAAGACA-TCCCAA- 3' Trim71 mmu-miR-466a-3p beg:707 end:727 pic:3' AGAATACACACGCACATACATAT 5'& .|||||| | ||.|||.|. &5' ----GTGTGTGGGAGTGTGTGTG 3' Trim71 mmu-miR-466a-3p beg:22 end:47 pic:3' AGAATA-CACACGCACATACATAT 5'& .||| |||||| |||.|||.| &5' -TTTAGGGTGTGCATGTGTGTGT- 3' Trim71 mmu-miR-466b-3-3p beg:707 end:727 pic:3' AGAATACACACG--CACATACATAA 5'& .|||||| ||||.|||.| &5' ----GTGTGTGGGAGTGTGTGTGT- 3' Trim71 mmu-miR-466b-3-3p beg:22 end:47 pic:3' AGAATA-CACACGCACATACATAA 5'& .||| |||||| |||.|||.| &5' -TTTAGGGTGTGCATGTGTGTGT- 3' Trim71 mmu-miR-466b-3p beg:707 end:727 pic:3' AGAATACACACGCACATACATAT 5'& .|||||| | ||.|||.|. &5' ----GTGTGTGGGAGTGTGTGTG 3' Trim71 mmu-miR-466b-3p beg:22 end:47 pic:3' AGAATA-CACACGCACATACATAT 5'& .||| |||||| |||.|||.| &5' -TTTAGGGTGTGCATGTGTGTGT- 3' Trim71 mmu-miR-466b-3p beg:1053 end:1076 pic:3' AGA-ATACACACGCACATACATAT 5'& ||| |||||||| ||.|| &5' TCTCTATGTGTGAGGGTGTG---- 3' Trim71 mmu-miR-466c-3p beg:707 end:727 pic:3' AGAATACACACGCACATACATAT 5'& .|||||| | ||.|||.|. &5' ----GTGTGTGGGAGTGTGTGTG 3' Trim71 mmu-miR-466c-3p beg:22 end:47 pic:3' AGAATA-CACACGCACATACATAT 5'& .||| |||||| |||.|||.| &5' -TTTAGGGTGTGCATGTGTGTGT- 3' Trim71 mmu-miR-466d-3p beg:707 end:727 pic:3' GATACACACGCACATACATAT 5'& .|||||| | ||.|||.|. &5' --GTGTGTGGGAGTGTGTGTG 3' Trim71 mmu-miR-466d-3p beg:28 end:47 pic:3' GATACACACGCACATACATAT 5'& |||||| |||.|||.| &5' ----GTGTGCATGTGTGTGT- 3' Trim71 mmu-miR-466e-3p beg:707 end:727 pic:3' AGAATACACACGCACATACATAT 5'& .|||||| | ||.|||.|. &5' ----GTGTGTGGGAGTGTGTGTG 3' Trim71 mmu-miR-466e-3p beg:22 end:47 pic:3' AGAATA-CACACGCACATACATAT 5'& .||| |||||| |||.|||.| &5' -TTTAGGGTGTGCATGTGTGTGT- 3' Trim71 mmu-miR-466f beg:716 end:739 pic:3' TGTACGTGTACGTGTGTGTGCA 5'& .|| ..|| |||||.||| &5' --GTGTGTGTGTGCACACGCGT 3' Trim71 mmu-miR-466f-3p beg:706 end:729 pic:3' CACACATACA--CACACACATAC 5'& ||||.|| ||||||||.|| &5' --GTGTGTGGGAGTGTGTGTGTG 3' Trim71 mmu-miR-466g beg:878 end:889 pic:3' ACACACACGTACACAGACATA 5'& ||||||||.| &5' -----------GTGTCTGTGT 3' Trim71 mmu-miR-466i beg:705 end:730 pic:3' ATCACACATA--CACACACACATA 5'& .||||||. ||||||||||. &5' -GGTGTGTGGGAGTGTGTGTGTG- 3' Trim71 mmu-miR-466i beg:514 end:545 pic:3' ATCACACATACAC---------ACACACATA 5'& |||| |||||| |||||||. &5' --GTGTTTATGTGGGGTTAGGTTGTGTGTG- 3' Trim71 mmu-miR-466i beg:27 end:47 pic:3' ATCACACATACACACACACATA 5'& .||||| |||||||||| &5' -GGTGTGCATGTGTGTGT---- 3' Trim71 mmu-miR-467a-1star beg:708 end:729 pic:3' CACATCCACACACATACATATA 5'& ||||.|| ||||||.|||. &5' GTGTGGGAGTGTGTGTGTG--- 3' Trim71 mmu-miR-467bstar beg:708 end:729 pic:3' CACAACCACACACATACATATA 5'& |||| || ||||||.|||. &5' GTGTGGGAGTGTGTGTGTG--- 3' Trim71 mmu-miR-467dstar beg:708 end:729 pic:3' CACATCCACACACATACATATA 5'& ||||.|| ||||||.|||. &5' GTGTGGGAGTGTGTGTGTG--- 3' Trim71 mmu-miR-467estar beg:24 end:45 pic:3' TATATCCACACACATACATATA 5'& |||| ||||| ||||.|.| &5' ---TAGG-GTGTGCATGTGTGT 3' Trim71 mmu-miR-467f beg:702 end:727 pic:3' ACATCCACACACA--CACATATA 5'& ||.|||||||| ||||.|.| &5' -GTGGGTGTGTGGGAGTGTGTGT 3' Trim71 mmu-miR-469 beg:323 end:341 pic:3' CCTGTGGTTCTAGTTACTTTCTCCGT 5'& ||| | |.|||||| &5' -------AAGGCCT----AGGAGGCA 3' Trim71 mmu-miR-469 beg:1215 end:1237 pic:3' CCTGTGGTTCTAGTTACTT-TCTCCGT 5'& |.||| || |||. .|||||| &5' -----CTAAG-TC--TGAGTGGAGGCA 3' Trim71 mmu-miR-483star beg:695 end:722 pic:3' TTCTGCCCTCCC-C---TCCTCACT 5'& |||| ||| ||| | .|||||| &5' AAGAAGGGTGGGTGTGTGGGAGTG- 3' Trim71 mmu-miR-484 beg:1215 end:1228 pic:3' TAGCCCTCCCCTGACTCGGACT 5'& || ||.|||| &5' ------------CTAAGTCTGA 3' Trim71 mmu-miR-490 beg:838 end:861 pic:3' GTCGTACCTCAGGAGGTCCAAC 5'& .||| || |||.|||||| &5' TAGCTC--AGGACTCTAGGTTG 3' Trim71 mmu-miR-500 beg:373 end:395 pic:3' ACTTGGGA-ACGGGTCCACGTAA 5'& ||| | || . .||||||| &5' -GAAGCATATGGTGGGGTGCAT- 3' Trim71 mmu-miR-509-5p beg:1 end:17 pic:3' TACTAACGGTGTAAGACCTCAT 5'& ||.| ||||||.|| &5' -----TGTC---TTCTGGGGT- 3' Trim71 mmu-miR-532-3p beg:700 end:719 pic:3' ACGTTCGGAACC-CACACCCTCC 5'& ..|. || ||||||||| &5' ---GGGTG--GGTGTGTGGGAG- 3' Trim71 mmu-miR-532-3p beg:978 end:995 pic:3' ACGTTCGGAACCCACACCCTCC 5'& ||| |||||.| &5' -----GCCACAGAAGTGGGGG- 3' Trim71 mmu-miR-539 beg:1187 end:1207 pic:3' TGTGTGGTTCCTATTAAAGAGG 5'& .|. ||| .|||||| &5' ----GCTCAGGTCTGTTTCTC- 3' Trim71 mmu-miR-539 beg:77 end:96 pic:3' TGTGTGGTTCCTATTAAAGAGG 5'& .||.|||| ||||||.. &5' -----TCAGGGAT-ATTTCTTT 3' Trim71 mmu-miR-539 beg:795 end:818 pic:3' TGTGTGGTTCCTATTAAAGAGG 5'& ||| ||||| |||||||.| &5' ACATCCCAAGCA-AATTTCTTC 3' Trim71 mmu-miR-540-5p beg:1273 end:1284 pic:3' TGTCTCAGTCTCCCACTGGGAAC 5'& |.||.||| &5' ---------------GGCCTTTG 3' Trim71 mmu-miR-592 beg:1319 end:1336 pic:3' TGTAGTAGCGTATAACTGTGTTA 5'& |..|| ||||||.| &5' --------GTGTAG-GACACAGT 3' Trim71 mmu-miR-599 beg:777 end:796 pic:3' CAAACTATTTG-ACTGTGTT 5'& | |..|| |||||||| &5' ----GCTGGACTTGACACAA 3' Trim71 mmu-miR-615-5p beg:1036 end:1055 pic:3' CTAGGCTCGTGGCCCCTGGGGG 5'& ||| .| |||||||.| &5' -----GAGGGCGGGGGACCTC- 3' Trim71 mmu-miR-666-5p beg:671 end:695 pic:3' CCG-AGAGTGTCGACACGGGCGA 5'& ||. |||||. .||| |.| &5' GGTGTCTCATCTTTGTATCTG-- 3' Trim71 mmu-miR-667 beg:669 end:680 pic:3' GAACCCGACCCACCGTCCACAGT 5'& |.|||||| &5' --------------CGGGTGTC- 3' Trim71 mmu-miR-668 beg:233 end:254 pic:3' CCATCACCCGGCTCGG---C-TCACTGT 5'& ..||||| | |||||.| &5' ---------TTGAGCCTGTGAAGTGATA 3' Trim71 mmu-miR-669e beg:331 end:348 pic:3' TACTTGTACGTGTGTGTTCTGT 5'& | | .||||.|||| &5' --------GGAGGCACAGGACA 3' Trim71 mmu-miR-669e beg:779 end:800 pic:3' TACTTGTACGTGTGTGTTCTGT 5'& ||.|| || |||||||||| &5' -TGGACTTG---ACACAAGACA 3' Trim71 mmu-miR-669f beg:19 end:46 pic:3' TATGCACA-----CACACATACATATAC 5'& |||| ||||| ||||.|.|| &5' ----GTGTTTAGGGTGTGCATGTGTGTG 3' Trim71 mmu-miR-669f beg:706 end:729 pic:3' TATGCACACACA--CATACATATAC 5'& ||||||| ||.|||.|.|| &5' ----GTGTGTGGGAGTGTGTGTGTG 3' Trim71 mmu-miR-669i beg:708 end:731 pic:3' CATACGTACACACATATACGT 5'& ||.|| . ||||||.|.|||| &5' GTGTGGGAGTGTGTGTGTGCA 3' Trim71 mmu-miR-669m beg:19 end:45 pic:3' TATACAAA---CACACCTACATATA 5'& |.||||| ||||| ||||.|.| &5' -TGTGTTTAGGGTGTGCATGTGTGT 3' Trim71 mmu-miR-670 beg:1011 end:1031 pic:3' AAGTGGTGTATGTG-AGTCCCTA 5'& |||| | ||| ||||||| &5' --CACC-CC--CACATCAGGGA- 3' Trim71 mmu-miR-670 beg:1120 end:1141 pic:3' AAGTGGTGTATGTGAGTCCCTA 5'& .|. | .||||||| &5' ---GCTTTGGAAGTTCAGGGA- 3' Trim71 mmu-miR-670 beg:73 end:88 pic:3' AAGTGGTGTATGT-GAGTCCCTA 5'& |. ||||||||| &5' -----------CGTCTCAGGGAT 3' Trim71 mmu-miR-673-3p beg:331 end:357 pic:3' CCA-CGTGTCTTGA-GTCGGGGCCT 5'& || ||||||.|| |.|.||.| &5' GGAGGCACAGGACAGCGGTCCTG-- 3' Trim71 mmu-miR-686 beg:1219 end:1237 pic:3' AGAAGTGGCAGAC---CCTTCGTTA 5'& ||||| |||.|||. &5' --------GTCTGAGTGGAGGCAG- 3' Trim71 mmu-miR-688 beg:227 end:247 pic:3' CTTATTCATCAG-CGGACGCT 5'& |.| |||||.|| &5' ----AGGGCTTGAGCCTGTGA 3' Trim71 mmu-miR-691 beg:1194 end:1212 pic:3' AAAAGACGGAGAGAAGTCCTTA 5'& ||||..|| ||||||| &5' ---TCTGTTTC---TCAGGAA- 3' Trim71 mmu-miR-691 beg:1305 end:1322 pic:3' AAAAGACGGAGAGAAGTCCTTA 5'& || | | |||||| &5' -------CCACCCAACAGGAA- 3' Trim71 mmu-miR-691 beg:1028 end:1041 pic:3' AAAAGACGGAGAGAAGTCCTTA 5'& || |||||||. &5' ----------CTGTTCAGGAG- 3' Trim71 mmu-miR-692 beg:946 end:969 pic:3' CTCACTCCGCGAGTTTCTCTA 5'& ||| |||| |||. |||| &5' GAGAGAGGGGCTTTTC-AGAT 3' Trim71 mmu-miR-693-3p beg:763 end:784 pic:3' AATGTCGGTGTAGAC-TTTCGACG 5'& ||. | ||||||| &5' -----GCTTGAGGAGAAAAGCTG- 3' Trim71 mmu-miR-693-5p beg:533 end:548 pic:3' CTTTTGAAAGCCTACACCGAC 5'& |.| |||||.| &5' --------TTGTGTGTGGTT- 3' Trim71 mmu-miR-697 beg:1053 end:1075 pic:3' AGAGGTGTCCTGGTCCTACAA 5'& ||||.|. | . |||.||| &5' TCTCTAT-GTGTGAGGGTGT- 3' Trim71 mmu-miR-702 beg:691 end:711 pic:3' CTCGCCCCA---TTTCCCACCCGT 5'& ||| .|||||||||. &5' ------GGTAAAGAAGGGTGGGT- 3' Trim71 mmu-miR-704 beg:1322 end:1344 pic:3' GATCCTCGTCTCGTGTACAGA 5'& ||||| || ||.|.|||||| &5' -TAGGA-CACAGTATATGTCT 3' Trim71 mmu-miR-706 beg:1185 end:1207 pic:3' AAAAAACTCTGTCC---CAAAGAGA 5'& |||. |||| ||||||| &5' ----TTGGCTCAGGTCTGTTTCTC- 3' Trim71 mmu-miR-711 beg:302 end:325 pic:3' GAATGTA-GAGAGGGGCCCAGGG 5'& || |||| ||||.||| |||. &5' CTCACATCCTCTTCCC---TCCT 3' Trim71 mmu-miR-713 beg:583 end:602 pic:3' CGACACACGGAAGTCACGT 5'& |||| || ||||||. &5' -CTGTTTACC-TCAGTGT- 3' Trim71 mmu-miR-713 beg:532 end:551 pic:3' CGACACACGGAAGTCACGT 5'& |.||||||. |. ||| &5' GTTGTGTGTGGTT--TGC- 3' Trim71 mmu-miR-741 beg:32 end:53 pic:3' AGATGTATCTTAC-CGTAGAGAGT 5'& |.||| .|| |..||||||| &5' --TGCAT---GTGTGTGTCTCTCA 3' Trim71 mmu-miR-743a beg:1326 end:1347 pic:3' AGATGAGTCGAACCACAGAAAG 5'& || |||. |||||||. &5' ---ACACAGTATA-TGTCTTTT 3' Trim71 mmu-miR-743b-3p beg:1329 end:1347 pic:3' AGATAAGTCGTACTACAGAAAG 5'& |||.|| ||||||||. &5' ------CAGTAT-ATGTCTTTT 3' Trim71 mmu-miR-764-5p beg:712 end:733 pic:3' TCCTCCTGTACACTCGTGG 5'& .|||| ..|||| |||| &5' GGGAGTGTGTGTGTGCAC- 3' Trim71 mmu-miR-764-5p beg:361 end:381 pic:3' TCCTCCTGT-ACACTCGTGG 5'& ||||.|| || ||||. &5' --GAGGGCACTGGAAGCAT- 3' Trim71 mmu-miR-770-3p beg:288 end:310 pic:3' GGTCGAGGTGCAGT-CCGGGTGC 5'& | || .| || |||.||| &5' CTGGCAA-GCCTCTTGGCTCAC- 3' Trim71 mmu-miR-875-3p beg:653 end:676 pic:3' GTATC-GG--AGTCATAAAAGTCC 5'& || || ||| |||||||.|| &5' ---AGACCATTCA-TATTTTCGGG 3' Trim71 mmu-miR-875-5p beg:905 end:922 pic:3' GTGGACTATTTTGACTCCATAT 5'& ||.||| ||||||| &5' --------AAGACTTAGGTATA 3' Trim71 mmu-miR-877 beg:210 end:227 pic:3' GGGACGCGGT-AGAGGAGATG 5'& |. ||||||||. &5' ------GTAATTCTCCTCTG- 3' Trim71 mmu-miR-877star beg:1034 end:1052 pic:3' ACCCTCCTCCCTCTTCTCCTGT 5'& ||||||| .|.|||| &5' ----AGGAGGGC--GGGGGAC- 3' Trim71 mmu-miR-881 beg:1313 end:1336 pic:3' AGATAAGTCTTT-----TCTGTGTCAA 5'& |||.|| .|||||||| &5' ------CAGGAAGTGTAGGACACAGT- 3' Trim71 mmu-miR-98 beg:583 end:598 pic:3' TTGTTATGTTGAATGATGGAGT 5'& || .||||||| &5' ----------CTGTTTACCTCA 3' Trim71 mmu-miR-9star beg:1082 end:1097 pic:3' TGAAAGCCAATAGATCGAAATA 5'& || |||||||. &5' ------GGGA---TAGCTTTG- 3' Trim71 mmu-let-7a beg:144 end:174 pic:3' TTGATATGT-----TGGAT----GATGGAGT 5'& .|||| .|||| |||||||| &5' ----GTACAACATTGCCTAAGTCCTACCTCA 3' Trim71 mmu-let-7e beg:144 end:174 pic:3' TTGATATGTTGG---------AGGATGGAGT 5'& .|||||| |||||||||| &5' ----GTACAACATTGCCTAAGTCCTACCTCA 3' Trim71 mmu-let-7i beg:144 end:174 pic:3' TTGTCGTGTT-TGATG--------ATGGAGT 5'& ||.|||| |.|.| ||||||| &5' ---AGTACAACATTGCCTAAGTCCTACCTCA 3' Trim71 mmu-let-7b beg:588 end:598 pic:3' TTGGTGTGTTGGATGATGGAGT 5'& .||||||| &5' --------------TTACCTCA 3' Trim71 mmu-miR-1982.2 beg:17 end:34 pic:3' GACACCCTCTTGTATCCCACT 5'& ||||| ||||||| &5' CTGTGTT------TAGGGTG- 3' Trim71 mmu-miR-125a-5p beg:60 end:87 pic:3' AGTGTCCAATTTCCCAGAGTCCCT 5'& ||| || ||| |||||||||| &5' TCAAAGAAGAAATCGTCTCAGGGA 3' Trim71 mmu-miR-450a-5p beg:857 end:876 pic:3' TATAATCCTTGTGT-AGCGTTTT 5'& ||| |||||||. &5' -------GAAAGTGTTCGCAAAG 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Trim71 RAID00002427 mmu-miR-290b-5p miRNA MIMAT0029900 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID00136196 mmu-miR-6240 miRNA MIMAT0024861 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID00213536 mmu-miR-7660-3p miRNA MIMAT0029827 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID00214782 mmu-miR-466h-5p miRNA MIMAT0004884 Trim71 mRNA 636931 CLIP-seq 0.5483 Trim71 RAID00368299 mmu-miR-351-5p miRNA MIMAT0000609 Trim71 mRNA 636931 CLIP-seq//Prediction 0.6308 Trim71 RAID00385596 mmu-miR-532-3p miRNA MIMAT0004781 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID00400195 mmu-miR-495-3p miRNA MIMAT0003456 Trim71 mRNA 636931 Prediction 0.2202 Trim71 RAID00435906 mmu-miR-204-5p miRNA MIMAT0000237 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID00443662 mmu-miR-342-3p miRNA MIMAT0000590 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID00549132 mmu-let-7c-5p miRNA MIMAT0000523 Trim71 mRNA 636931 Prediction 0.2381 Trim71 RAID00632042 mmu-miR-1192 miRNA MIMAT0005850 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID00652845 mmu-miR-466j miRNA MIMAT0005848 Trim71 mRNA 636931 CLIP-seq 0.5483 Trim71 RAID00766719 mmu-miR-1961 miRNA MIMAT0009434 Trim71 mRNA 636931 Prediction 0.2202 Trim71 RAID00827735 mmu-miR-7002-3p miRNA MIMAT0027907 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID00889010 mmu-miR-125a-5p miRNA MIMAT0000135 Trim71 mRNA 636931 RT-PCR//CLIP-seq//Prediction 0.9007 Trim71 RAID00908837 mmu-miR-329-3p miRNA MIMAT0000567 Trim71 mRNA 636931 CLIP-seq 0.5483 Trim71 RAID00925395 mmu-miR-29c-3p miRNA MIMAT0000536 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID01003546 mmu-miR-23b-3p miRNA MIMAT0000125 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID01026556 mmu-miR-374b-5p miRNA MIMAT0003727 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID01034619 mmu-miR-135b-5p miRNA MIMAT0000612 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID01041042 mmu-miR-669c-3p miRNA MIMAT0017253 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID01046317 mmu-miR-7073-5p miRNA MIMAT0028052 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID01180057 mmu-miR-320-3p miRNA MIMAT0000666 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID01229727 mmu-miR-183-5p miRNA MIMAT0000212 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID01254779 mmu-miR-30d-5p miRNA MIMAT0000515 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID01310846 mmu-miR-23a-3p miRNA MIMAT0000532 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID01365356 mmu-miR-203-3p miRNA MIMAT0000236 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID01424288 mmu-miR-466m-5p miRNA MIMAT0014882 Trim71 mRNA 636931 CLIP-seq 0.5483 Trim71 RAID01428547 mmu-miR-196b-5p miRNA MIMAT0001081 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID01465161 mmu-miR-153-3p miRNA MIMAT0000163 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID01491544 mmu-miR-6990-3p miRNA MIMAT0027883 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID01559014 mmu-miR-653-5p miRNA MIMAT0004943 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID01570357 mmu-let-7b-5p miRNA MIMAT0000522 Trim71 mRNA 636931 Prediction 0.2381 Trim71 RAID01617493 mmu-miR-466q miRNA MIMAT0020631 Trim71 mRNA 636931 CLIP-seq//Prediction 0.6308 Trim71 RAID01774201 mmu-miR-140-3p miRNA MIMAT0000152 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID01811316 mmu-miR-144-3p miRNA MIMAT0000156 Trim71 mRNA 636931 Prediction 0.2202 Trim71 RAID01828957 mmu-miR-6413 miRNA MIMAT0025166 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID01846566 mmu-miR-669m-5p miRNA MIMAT0017346 Trim71 mRNA 636931 CLIP-seq 0.5483 Trim71 RAID01882752 mmu-miR-30a-5p miRNA MIMAT0000128 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID01902005 mmu-miR-1249-5p miRNA MIMAT0014804 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID01914228 mmu-miR-374c-5p miRNA MIMAT0014953 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID01973478 mmu-miR-6976-5p miRNA MIMAT0027854 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID02054087 mmu-let-7d-5p miRNA MIMAT0000383 Trim71 mRNA 636931 Prediction 0.2381 Trim71 RAID02103604 mmu-miR-181c-5p miRNA MIMAT0000674 Trim71 mRNA 636931 Prediction 0.2381 Trim71 RAID02125986 mmu-miR-99b-5p miRNA MIMAT0000132 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID02132084 mmu-miR-96-5p miRNA MIMAT0000541 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID02192823 mmu-miR-212-5p miRNA MIMAT0017053 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID02225527 mmu-miR-9-5p miRNA MIMAT0000142 Trim71 mRNA 636931 Prediction 0.2202 Trim71 RAID02237335 mmu-let-7f-5p miRNA MIMAT0000525 Trim71 mRNA 636931 Prediction 0.2381 Trim71 RAID02247546 mmu-miR-182-5p miRNA MIMAT0000211 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID02260132 mmu-miR-30c-5p miRNA MIMAT0000514 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID02300190 mmu-miR-186-5p miRNA MIMAT0000215 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID02334918 mmu-miR-489-3p miRNA MIMAT0003112 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID02350129 mmu-let-7i-5p miRNA MIMAT0000122 Trim71 mRNA 636931 Prediction 0.2381 Trim71 RAID02354570 mmu-miR-202-3p miRNA MIMAT0000235 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID02371383 mmu-miR-211-5p miRNA MIMAT0000668 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID02504210 mmu-miR-384-5p miRNA MIMAT0004745 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID02553225 mmu-miR-128-3p miRNA MIMAT0000140 Trim71 mRNA 636931 RT-PCR 0.7311 Trim71 RAID02554875 mmu-let-7a-5p miRNA MIMAT0000521 Trim71 mRNA 636931 IHC (Immunohistochemistry)//Reporter Assay//Northern Blot//ISH (In Situ Hybridization)//ICC (Immunocytochemistry)//IP (immunoprecipitation)//FACS (fluorescence-activated cell sorting)//Western Blot//RT-PCR//Prediction 0.9999 Trim71 RAID02562230 mmu-miR-218-5p miRNA MIMAT0000663 Trim71 mRNA 636931 Prediction 0.2202 Trim71 RAID02679835 mmu-miR-6941-5p miRNA MIMAT0027782 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID02703678 mmu-miR-181a-5p miRNA MIMAT0000210 Trim71 mRNA 636931 Prediction 0.2381 Trim71 RAID02797196 mmu-miR-590-3p miRNA MIMAT0004896 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID02831495 mmu-miR-362-3p miRNA MIMAT0004684 Trim71 mRNA 636931 CLIP-seq 0.5483 Trim71 RAID02847151 mmu-miR-346-5p miRNA MIMAT0000597 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID02852356 mmu-miR-196a-5p miRNA MIMAT0000518 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID02923611 mmu-miR-135a-5p miRNA MIMAT0000147 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID02981011 mmu-miR-670-5p miRNA MIMAT0003736 Trim71 mRNA 636931 CLIP-seq 0.5483 Trim71 RAID03013020 mmu-miR-3057-3p miRNA MIMAT0014823 Trim71 mRNA 636931 CLIP-seq 0.5483 Trim71 RAID03022731 mmu-miR-384-3p miRNA MIMAT0001076 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID03042016 mmu-miR-98-5p miRNA MIMAT0000545 Trim71 mRNA 636931 Prediction 0.2455 Trim71 RAID03121356 mmu-miR-181b-5p miRNA MIMAT0000673 Trim71 mRNA 636931 Prediction 0.2381 Trim71 RAID03181003 mmu-miR-873a-5p miRNA MIMAT0004936 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID03203510 mmu-miR-409-3p miRNA MIMAT0001090 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID03217800 mmu-miR-379-5p miRNA MIMAT0000743 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID03223211 mmu-let-7e-5p miRNA MIMAT0000524 Trim71 mRNA 636931 IHC (Immunohistochemistry)//Reporter Assay//Northern Blot//ISH (In Situ Hybridization)//ICC (Immunocytochemistry)//IP (immunoprecipitation)//FACS (fluorescence-activated cell sorting)//Western Blot//RT-PCR//Prediction 0.9999 Trim71 RAID03228823 mmu-miR-7229-3p miRNA MIMAT0028427 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID03262622 mmu-miR-26b-5p miRNA MIMAT0000534 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID03264429 mmu-miR-6936-5p miRNA MIMAT0027772 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID03415185 mmu-miR-7670-3p miRNA MIMAT0029847 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID03441471 mmu-miR-450a-5p miRNA MIMAT0001546 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID03498831 mmu-miR-375-3p miRNA MIMAT0000739 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID03502481 mmu-miR-7074-5p miRNA MIMAT0028054 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID03571078 mmu-miR-6540-5p miRNA MIMAT0025585 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID03588162 mmu-miR-882 miRNA MIMAT0004847 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID03618549 mmu-miR-199b-5p miRNA MIMAT0000672 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID03627518 mmu-miR-27b-3p miRNA MIMAT0000126 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID03686540 mmu-miR-181d-5p miRNA MIMAT0004324 Trim71 mRNA 636931 Prediction 0.2455 Trim71 RAID03773861 mmu-let-7g-5p miRNA MIMAT0000121 Trim71 mRNA 636931 Prediction 0.2381 Trim71 RAID03790371 mmu-miR-592-5p miRNA MIMAT0003730 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID03790905 mmu-miR-3092-5p miRNA MIMAT0014905 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID03795449 mmu-let-7k miRNA MIMAT0025580 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID03817195 mmu-miR-696 miRNA MIMAT0003483 Trim71 mRNA 636931 CLIP-seq 0.5483 Trim71 RAID03837583 mmu-miR-30e-5p miRNA MIMAT0000248 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID03908716 mmu-miR-125b-5p miRNA MIMAT0000136 Trim71 mRNA 636931 RT-PCR//CLIP-seq//Prediction 0.9007 Trim71 RAID03938535 mmu-miR-188-3p miRNA MIMAT0004541 Trim71 mRNA 636931 CLIP-seq 0.5483 Trim71 RAID03943648 mmu-miR-543-3p miRNA MIMAT0003168 Trim71 mRNA 636931 Prediction 0.2202 Trim71 RAID03944955 mmu-miR-7053-5p miRNA MIMAT0028010 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID03946465 mmu-miR-30b-5p miRNA MIMAT0000130 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID03951931 mmu-miR-93-5p miRNA MIMAT0000540 Trim71 mRNA 636931 Prediction 0.1828 Trim71 RAID04185608 Xist lncRNA 213742 Trim71 protein 636931 ChiRP-Seq (Chromatin Isolation by RNA purification) 0.5483