SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs31015540 | snp | C/T | 0.375 | 0.216506 | intron-variant | Shkbp1 | GRCm38.p3 | 7:27353203 | AGGAGAGAATCAATT[C/T]CTGCAAGTTGTCCTC | 192192 |
rs31100312 | snp | G/T | 0.375 | 0.216506 | intron-variant, upstream-variant-2KB | Sptbn4, Shkbp1 | GRCm38.p3 | 7:27357572 | AAAGAACAGTTACAT[G/T]CCCCAGACTCCTCTC | 192192 |
rs31142841 | snp | C/T | 0.375 | 0.216506 | synonymous-codon, upstream-variant-2KB | Sptbn4, Shkbp1 | GRCm38.p3 | 7:27357361 | CTCATCTGTGGATGA[C/T]GTGGTAGGTAGTGTC | 192192 |
rs31289408 | snp | A/G | 0.32 | 0.24 | intron-variant | Shkbp1 | GRCm38.p3 | 7:27354871 | GTATTGAAACTGCCC[A/G]GAGACTACCGAAGCC | 192192 |
rs31297350 | snp | A/C | 0.33241 | 0.236027 | intron-variant | Shkbp1 | GRCm38.p3 | 7:27345046 | GTGAACAAAGGTCAG[A/C]AATCAGTGCAGCTGG | 192192 |
rs31310916 | snp | A/G | 0.33241 | 0.236027 | intron-variant | Shkbp1 | GRCm38.p3 | 7:27344907 | GAAAAGACCAGGAAC[A/G]CTCGGGCCTATCAGA | 192192 |
rs31429296 | snp | G/T | 0.444444 | 0.157135 | intron-variant | Shkbp1 | Mm_Celera | 7:27349251 | GATTATAGAGTGGGG[G/T]GTGTGTGTGTGTGTG | 192192 |
rs31552188 | snp | A/G | 0.290657 | 0.246672 | intron-variant | Shkbp1 | GRCm38.p3 | 7:27345169 | GCCGGGAATCAGCAG[A/G]TACCAATGTCATTGC | 192192 |
rs31655432 | snp | A/G | 0.33241 | 0.236027 | intron-variant | Shkbp1 | GRCm38.p3 | 7:27344504 | GCACAGTGACCTGAG[A/G]TTTTTCCAGTGTCCC | 192192 |
rs31666327 | snp | C/T | 0.32 | 0.24 | intron-variant | Shkbp1 | GRCm38.p3 | 7:27354901 | CTGGCTAGTTTCAAC[C/T]GGCGTAAAATTCTAG | 192192 |
rs31697044 | snp | C/T | 0.375 | 0.216506 | intron-variant | Shkbp1 | GRCm38.p3 | 7:27353181 | ATCCTGAGACATGTG[C/T]GGTAGAAGGAGAGAA | 192192 |
rs31749374 | snp | A/G | 0.465374 | 0.126941 | intron-variant | Shkbp1 | GRCm38.p3 | 7:27348783 | ACTCCTTTCAACCTT[A/G]CCAGTGGCCACCCGT | 192192 |
rs31796054 | snp | A/C | 0.444444 | 0.157135 | intron-variant | Shkbp1 | Mm_Celera | 7:27355360 | GAGCTCCTGTCCCCC[A/C]TCCCACCCGGAGTCC | 192192 |
rs31918755 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Shkbp1 | Mm_Celera | 7:27353733 | GCTACAGACATGGCT[C/T]GCTGGGTAAAGCACT | 192192 |
rs32125499 | snp | A/T | 0.375 | 0.216506 | intron-variant, upstream-variant-2KB | Sptbn4, Shkbp1 | GRCm38.p3 | 7:27357491 | ATATTTGGAAGAGGA[A/T]CTCAACCACACCGCC | 192192 |
rs32143885 | snp | A/T | 0.375 | 0.216506 | intron-variant | Shkbp1 | GRCm38.p3 | 7:27344398 | TCAGCCTGCACCCCA[A/T]GCCACCCTGACACTC | 192192 |
rs32211008 | snp | A/C/T | 0.375 | 0.216506 | intron-variant | Shkbp1 | GRCm38.p3 | 7:27344400 | AGCCTGCACCCCATG[A/C/T]CACCCTGACACTCAG | 192192 |
rs32231961 | snp | A/T | 0.455 | 0.143091 | intron-variant | Shkbp1 | GRCm38.p3 | 7:27352890 | TCTGTGTGCCGGGAT[A/T]CAGCATTCAATGACC | 192192 |
rs32244668 | snp | A/T | 0.32 | 0.24 | intron-variant | Shkbp1 | Mm_Celera | 7:27354858 | TGCAAGGAGAAAGGT[A/T]TTGAAACTGCCCAGA | 192192 |
rs32283234 | snp | C/T | 0.375 | 0.216506 | intron-variant | Shkbp1 | GRCm38.p3 | 7:27353177 | TTTGATCCTGAGACA[C/T]GTGCGGTAGAAGGAG | 192192 |
rs32315788 | snp | C/T | 0.304688 | 0.243945 | intron-variant | Shkbp1 | GRCm38.p3 | 7:27344986 | GAATGGTGCTGGGTG[C/T]GAGTACAGAGGTGAA | 192192 |
rs32362916 | snp | C/T | 0.375 | 0.216506 | intron-variant | Shkbp1 | Mm_Celera | 7:27355191 | TATACAGTGGCAGAA[C/T]TCACCCATTTACCCA | 192192 |
rs32403371 | snp | C/G | 0.375 | 0.216506 | intron-variant | Shkbp1 | GRCm38.p3 | 7:27344399 | CAGCCTGCACCCCAT[C/G]CCACCCTGACACTCA | 192192 |
rs32479012 | snp | C/T | 0.375 | 0.216506 | intron-variant | Shkbp1 | GRCm38.p3 | 7:27353245 | CATGCACCCTCCCAC[C/T]ACGTGCCCAATAAAT | 192192 |
rs32513307 | snp | A/C | 0.375 | 0.216506 | intron-variant | Shkbp1 | GRCm38.p3 | 7:27348991 | AGAGGTGTCAGAGCT[A/C]CTGGAGCTGCAGTCA | 192192 |
rs32530734 | snp | C/T | 0.5 | 0 | intron-variant | Shkbp1 | GRCm38.p3 | 7:27342818 | GGGGGTAAGATGAGT[C/T]ACAGGTCAAGAGGAA | 192192 |
rs36240786 | snp | C/T | 0.408163 | 0.193609 | intron-variant | Shkbp1 | GRCm38.p3 | 7:27342642 | AAAGTGGAATTACAG[C/T]TACCTGGTAAGAGAG | 192192 |
rs36333918 | snp | A/C | 0.48 | 0.0979796 | synonymous-codon, nc-transcript-variant | Shkbp1 | GRCm38.p3 | 7:27347042 | CATGATCTTAGTGAC[A/C]GGGCTGCGGTGCACA | 192192 |
rs36351672 | snp | A/G | 0.244898 | 0.249948 | synonymous-codon, nc-transcript-variant | Shkbp1 | GRCm38.p3 | 7:27344675 | ACGCACAAATAGCTG[A/G]CTGGCATTTGGCACC | 192192 |
rs36386688 | snp | A/C | 0.231111 | 0.249285 | synonymous-codon, nc-transcript-variant | Shkbp1 | GRCm38.p3 | 7:27344690 | ACTGGCATTTGGCAC[A/C]ACTTTCTGGATGAAC | 192192 |
rs36399995 | snp | C/T | 0.277778 | 0.248452 | intron-variant | Shkbp1 | GRCm38.p3 | 7:27345702 | ATTGGTTCCTTTGCA[C/T]GGCCCGTTTCCTCAG | 192192 |
rs36463264 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Shkbp1 | GRCm38.p3 | 7:27348304 | TCTGGCTGGCCACAG[C/T]AGGGCAAGAAACTTT | 192192 |
rs36469566 | snp | C/G | 0.48 | 0.0979796 | intron-variant | Shkbp1 | GRCm38.p3 | 7:27350284 | ATCTGCTCGAAGAAT[C/G]CCACGGTTTTCCAAA | 192192 |
rs36542892 | snp | A/C | 0.297521 | 0.245442 | downstream-variant-500B | Shkbp1 | Mm_Celera | 7:27341731 | AAGTTCTCTTCTCTG[A/C]TTAAACCAGAAGGCA | 192192 |
rs36557682 | snp | A/G | 0.32 | 0.24 | intron-variant | Shkbp1 | GRCm38.p3 | 7:27345657 | ACTGGCCACGCCCCT[A/G]CTCTGCATTTAACTC | 192192 |
rs36743319 | snp | A/G | 0.48 | 0.0979796 | utr-variant-3-prime, nc-transcript-variant | Shkbp1 | GRCm38.p3 | 7:27342161 | GGTTTTATTGGAGAT[A/G]GTGGCTTTGGCTTTT | 192192 |
rs36785757 | snp | A/G | 0.336735 | 0.234472 | downstream-variant-500B | Shkbp1 | GRCm38.p3 | 7:27342051 | CTACCTCTTCCCTTG[A/G]ACAACTCCTTCCTCC | 192192 |
rs36817864 | snp | A/G | 0.244898 | 0.249948 | intron-variant | Shkbp1 | GRCm38.p3 | 7:27345766 | TGGTCCATCATTTCT[A/G]CTCTAAGGTCCTTGA | 192192 |
rs36839374 | snp | C/T | 0.48 | 0.0979796 | synonymous-codon, nc-transcript-variant | Shkbp1 | GRCm38.p3 | 7:27351742 | GGCCCACAGAAGGAT[C/T]TCGCTGCCAGTAGCT | 192192 |
rs36851585 | snp | A/G | 0.277778 | 0.248452 | intron-variant | Shkbp1 | Mm_Celera | 7:27345818 | ATTCAGCCCTCTTCA[A/G]TGACCCTCACACACT | 192192 |
rs36869101 | snp | C/G | 0.408163 | 0.193609 | intron-variant | Shkbp1 | GRCm38.p3 | 7:27348269 | TGCCGTCGAGACACA[C/G]AGCTACGGCTACGGC | 192192 |
rs37162303 | snp | C/T | 0.489796 | 0.070696 | intron-variant | Shkbp1 | GRCm38.p3 | 7:27350445 | AACCCTGGGCCTACA[C/T]AGTCACAGACACTCG | 192192 |
rs37298123 | snp | C/T | 0.197531 | 0.244432 | intron-variant | Shkbp1 | Mm_Celera | 7:27345432 | CTCCCAGTTTAAGCG[C/T]TTTTAGAAGGGTCAA | 192192 |
rs37316858 | snp | A/G | 0.48 | 0.0979796 | synonymous-codon, nc-transcript-variant | Shkbp1 | GRCm38.p3 | 7:27348583 | GAGGAGGAAGGAGCC[A/G]GCTGCATCATAGCTC | 192192 |
rs37590779 | snp | G/T | 0.124444 | 0.216185 | synonymous-codon, nc-transcript-variant | Shkbp1 | Mm_Celera | 7:27342753 | CTCTTCTTCTGTCAG[G/T]CCGCCTGCTGGGGGT | 192192 |
rs37613703 | snp | A/G | 0.231111 | 0.249285 | utr-variant-3-prime, nc-transcript-variant | Shkbp1 | GRCm38.p3 | 7:27342204 | AGGTGGGAACCTGGC[A/G]ACACAGATTACACCA | 192192 |
rs37911935 | snp | C/T | 0.459184 | 0.136902 | intron-variant | Shkbp1 | GRCm38.p3 | 7:27350773 | GTGGGAGTGTAATGG[C/T]GAGTAGAATCCTAAC | 192192 |
rs37975869 | snp | C/G | 0.408163 | 0.193609 | intron-variant | Shkbp1 | Mm_Celera | 7:27345431 | CCTCCCAGTTTAAGC[C/G]CTTTTAGAAGGGTCA | 192192 |
rs38075906 | snp | C/T | 0.375 | 0.216506 | intron-variant | Shkbp1 | GRCm38.p3 | 7:27344081 | CACTGAACTGACCCA[C/T]CAGGCTGAACGAGAT | 192192 |
rs38143899 | snp | C/T | 0.32 | 0.24 | intron-variant | Shkbp1 | GRCm38.p3 | 7:27343451 | GGGTCAGAAGTCATT[C/T]AGCCTGGCCCCTCTC | 192192 |
rs38290466 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Shkbp1 | Mm_Celera | 7:27344911 | AGACCAGGAACACTC[A/G]GGCCTATCAGAAGAC | 192192 |
rs38379518 | snp | C/T | 0.375 | 0.216506 | intron-variant | Shkbp1 | GRCm38.p3 | 7:27348259 | TCCTGAGGAGTGCCG[C/T]CGAGACACAGAGCTA | 192192 |
rs38379832 | snp | C/T | 0.231111 | 0.249285 | intron-variant | Shkbp1 | Mm_Celera | 7:27345778 | TCTGCTCTAAGGTCC[C/T]TGACTTCAGACAGGC | 192192 |
rs38492103 | snp | A/G | 0.297521 | 0.245442 | intron-variant | Shkbp1 | GRCm38.p3 | 7:27346889 | TGTGGCTACCCTCTC[A/G]GGTCTCCCGTTACCT | 192192 |
rs38753789 | snp | C/T | 0.231111 | 0.249285 | intron-variant | Shkbp1 | Mm_Celera | 7:27352208 | CGTCTTAAAACAGAG[C/T]GTAAAGGCTGGAGTC | 192192 |
rs38775594 | snp | A/G | 0.244898 | 0.249948 | intron-variant | Shkbp1 | GRCm38.p3 | 7:27342549 | CTGAGTGGAGACTGA[A/G]AAGGAGGGAAACTCA | 192192 |
rs39034847 | snp | G/T | 0.375 | 0.216506 | intron-variant | Shkbp1 | GRCm38.p3 | 7:27344145 | CTGCCTTCTTCTGTT[G/T]ATTCCTATTTAGCTT | 192192 |
rs39335378 | snp | C/T | 0.486111 | 0.0821678 | intron-variant | Shkbp1 | GRCm38.p3 | 7:27348213 | AGCAAACCAGAAGCA[C/T]GTGCTGCAGGAATAA | 192192 |
rs40097680 | snp | A/G | 0.48 | 0.0979796 | intron-variant | Shkbp1 | GRCm38.p3 | 7:27347821 | GCTTCAGCGTTGTAC[A/G]CGCAGTGGCCCTGGG | 192192 |
rs45659447 | snp | A/C | | | intron-variant | Shkbp1 | GRCm38.p3 | 7:27346663 | CACCCCCAGAGAACT[A/C]GGATTGCAGGTTTGG | 192192 |
rs45734461 | snp | A/T | | | intron-variant | Shkbp1 | Mm_Celera | 7:27346558 | TTTTTTTATTTTTAA[A/T]TTTTTTAGAGACAGG | 192192 |
rs45738825 | snp | C/G | | | intron-variant | Shkbp1 | GRCm38.p3 | 7:27351081 | GGCTGGATTACATCC[C/G]TCCATGTGTGTCAAC | 192192 |
rs45819491 | snp | C/G | | | intron-variant | Shkbp1 | GRCm38.p3 | 7:27355685 | ACGCTGCCTCCTCCA[C/G]TGAGATTCATGCATT | 192192 |
rs45984669 | snp | C/G | | | intron-variant | Shkbp1 | GRCm38.p3 | 7:27355836 | ATCCCGCCTCGGTCC[C/G]GTAGGATGGGGCCTC | 192192 |
rs46047409 | snp | A/G | | | synonymous-codon, nc-transcript-variant | Shkbp1 | GRCm38.p3 | 7:27342696 | AGAGCCCCGAGAGGA[A/G]GCCAATGGGCTCAGC | 192192 |
rs46062636 | snp | A/G | | | intron-variant, upstream-variant-2KB | Sptbn4, Shkbp1 | GRCm38.p3 | 7:27357697 | TGAAGTACTGGGGGG[A/G]GGGGGGAGCTTGCAG | 192192 |
rs46928163 | snp | C/T | | | intron-variant | Shkbp1 | GRCm38.p3 | 7:27348524 | CACACTGCACAAGGA[C/T]GCTGCTTACCTACAT | 192192 |
rs47062629 | snp | A/G | | | downstream-variant-500B | Shkbp1 | GRCm38.p3 | 7:27342088 | CAAAAAAACAAAACA[A/G]AACAGAACAACAACA | 192192 |
rs47227973 | snp | A/G | | | intron-variant | Shkbp1 | Mm_Celera | 7:27346780 | CCTGTAGCCCAGGCT[A/G]ACCTTGAACTGGAAG | 192192 |
rs47501326 | snp | A/G | | | intron-variant | Shkbp1 | GRCm38.p3 | 7:27347741 | CCCCCTGCCTCTGTC[A/G]TCCGAGTGTTGGAGA | 192192 |
rs47542296 | snp | A/C | | | intron-variant | Shkbp1 | GRCm38.p3 | 7:27348010 | CTTGTCCTCCCCATA[A/C]AGAAAAAGAAGAGGA | 192192 |
rs47720826 | snp | C/T | | | intron-variant | Shkbp1 | GRCm38.p3 | 7:27342992 | CAGAGGTCCTGAGTT[C/T]GATTCCCAGTAACCA | 192192 |
rs48393649 | snp | A/G | | | intron-variant | Shkbp1 | GRCm38.p3 | 7:27346473 | TTGCTTAATGGATGC[A/G]TTTTCTTCTTACTCC | 192192 |
rs48448500 | snp | A/G | | | intron-variant | Shkbp1 | GRCm38.p3 | 7:27348194 | CTAAAACAGAGCTAA[A/G]TAAAGCAAACCAGAA | 192192 |
rs48538923 | snp | C/T | | | intron-variant | Shkbp1 | Mm_Celera | 7:27350143 | TCCTGCCATCTTGCA[C/T]CCTGCCATCTTGCAC | 192192 |
rs48595915 | snp | A/G | | | intron-variant | Shkbp1 | GRCm38.p3 | 7:27351444 | GAAACCCTGACTAAG[A/G]CAGTATTCAGGAGTT | 192192 |
rs48733685 | snp | A/G | | | intron-variant | Shkbp1 | GRCm38.p3 | 7:27351394 | ACCCTTTCCTCCCCA[A/G]CTTGCTTCTTGGTCA | 192192 |
rs49134668 | snp | C/T | | | intron-variant | Shkbp1 | GRCm38.p3 | 7:27351491 | GGAATTCAAGGCTAG[C/T]TTGGGCTACATAGTA | 192192 |
rs49185487 | snp | A/G | | | intron-variant, upstream-variant-2KB | Sptbn4, Shkbp1 | GRCm38.p3 | 7:27357692 | GCAAATGAAGTACTG[A/G]GGGGGGGGGGGAGCT | 192192 |
rs49268884 | snp | A/G | | | intron-variant, upstream-variant-2KB | Sptbn4, Shkbp1 | GRCm38.p3 | 7:27357685 | AAACAATGCAAATGA[A/G]GTACTGGGGGGGGGG | 192192 |
rs49536198 | snp | C/T | | | intron-variant | Shkbp1 | GRCm38.p3 | 7:27350398 | CTGTAGGGTTCTTTT[C/T]CTCTTTCTCTAGGTA | 192192 |
rs49609535 | snp | A/G | | | intron-variant | Shkbp1 | GRCm38.p3 | 7:27346620 | TATGGAGGGGAGGAT[A/G]ACCTTAAAATTATGA | 192192 |
rs49612358 | snp | A/C | | | missense, nc-transcript-variant | Shkbp1 | GRCm38.p3 | 7:27342695 | AAGAGCCCCGAGAGG[A/C]AGCCAATGGGCTCAG | 192192 |
rs49836100 | snp | C/T | | | intron-variant, upstream-variant-2KB | Sptbn4, Shkbp1 | GRCm38.p3 | 7:27357708 | GGGGGGGGGGGAGCT[C/T]GCAGAGACCTGACAC | 192192 |
rs49937288 | snp | C/T | | | intron-variant | Shkbp1 | GRCm38.p3 | 7:27350397 | ACTGTAGGGTTCTTT[C/T]CCTCTTTCTCTAGGT | 192192 |
rs50697353 | snp | A/G | | | intron-variant | Shkbp1 | GRCm38.p3 | 7:27349398 | TCCCAGCCCCTCACT[A/G]GGAGATTCTAGGCAG | 192192 |
rs50731596 | snp | C/T | | | intron-variant | Shkbp1 | GRCm38.p3 | 7:27346062 | CTGGAGAGGTGGAGA[C/T]GGTCCCTAGGGCCCC | 192192 |
rs50745651 | snp | C/T | | | intron-variant | Shkbp1 | GRCm38.p3 | 7:27355477 | ACCGAGGAGGAGACA[C/T]GGGCCGAGTTGCAGA | 192192 |
rs51155776 | snp | C/T | | | intron-variant | Shkbp1 | GRCm38.p3 | 7:27355695 | CTCCACTGAGATTCA[C/T]GCATTCTCCTTTGGC | 192192 |
rs51268965 | snp | C/T | | | intron-variant | Shkbp1 | GRCm38.p3 | 7:27350262 | TCTTGCATCCTGCCA[C/T]CTCTACATCTGCTCG | 192192 |
rs51284545 | snp | A/T | | | intron-variant, upstream-variant-2KB | Sptbn4, Shkbp1 | GRCm38.p3 | 7:27357783 | GCCTTGAGATAAGTC[A/T]TTTTGGAACCGCAAG | 192192 |
rs51363855 | snp | C/T | | | downstream-variant-500B, upstream-variant-2KB | Sptbn4, Shkbp1 | Mm_Celera | 7:27356178 | AGTGATTTAGTAACT[C/T]CCCCCCCCCTTTTCT | 192192 |
rs51388647 | snp | C/T | | | synonymous-codon, nc-transcript-variant | Shkbp1 | GRCm38.p3 | 7:27350585 | GAACAAGGCCTCCAC[C/T]GGCACACCCAGGTGG | 192192 |
rs51410441 | snp | C/T | | | downstream-variant-500B, upstream-variant-2KB | Sptbn4, Shkbp1 | Mm_Celera | 7:27356132 | GCCGGTCTTTCCTGG[C/T]TTCGACGGGGCGCAC | 192192 |
rs51471169 | snp | C/T | | | intron-variant, upstream-variant-2KB | Sptbn4, Shkbp1 | GRCm38.p3 | 7:27357812 | AGAGGACCGGGTAAA[C/T]AAAGGTATGCTGGAG | 192192 |
rs51604776 | snp | A/G | | | intron-variant | Shkbp1 | GRCm38.p3 | 7:27351398 | TTTCCTCCCCAACTT[A/G]CTTCTTGGTCATGAT | 192192 |
rs51633567 | snp | G/T | | | intron-variant | Shkbp1 | GRCm38.p3 | 7:27348141 | GGTAAGATGCAAGAG[G/T]CAGGCTTGTCATGAA | 192192 |
rs51641022 | snp | A/C | | | synonymous-codon, utr-variant-5-prime, nc-transcript-variant | Shkbp1 | Mm_Celera | 7:27354388 | TGGAGGAGGTAGATA[A/C]CCATTGAAGAGGACA | 192192 |
rs51645278 | snp | G/T | | | intron-variant | Shkbp1 | GRCm38.p3 | 7:27346313 | TGTGAGACTCACACT[G/T]GGCTGATTGCCTCCC | 192192 |
rs51656445 | snp | C/T | | | intron-variant | Shkbp1 | GRCm38.p3 | 7:27344107 | GAGATGAACACATGC[C/T]CTGTCCTCTCAAGAC | 192192 |