DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G056027 Fbxo28 Rattus norvegicus 305105

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Fbxo28; Fbxo28_predicted; rCG_20120 rno-let-7i 611 632 -UGUC-GUGUUUGAUGAUGGAGU ||:| ::|| :|| ||:||| GACGGAUGCAUGCU-CUGCCUG- Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-101b 632 665 GAAGUCGAU-AGUG------------UCAUGACAU ||||| |||| :||:||| -GUCAGCACUUCACACAGCUCCUGCUGGUGCUGG- Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-106b 623 643 UAGACGUGA-CAGUCGUGAAAU ||||| || |||||||||| CUCUGC-CUGGUCAGCACUUC- Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-107 646 665 ACUAUCG-GGACAUGUUACGACGA ||| |||| ::||||| ---CAGCUCCUGCU-GGUGCUGG- Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-122a 617 645 -UGUUUG---UGGUAACAGU-GUGAGGU- :|| :| :|| |||| ||||:|| UGCAUGCUCUGCCUG-GUCAGCACUUCAC Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-129* 225 243 -UACGAAAAACCCCAUUCCCGAA |||:| |||| |||||| CAUGUUG--UGGG---AGGGCUA Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-135a 298 324 -AGUGUAU-CCUU--AUUU-UUCGGUAU |:||||: ||| |||| ||||| AUUACAUGCGGAUUUUAAACAAGCCC-- Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-138 643 658 CUAAGUGUUGUGGUCGA- ||||:| || ||| ---ACACAGCUCCUGCUG Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-140* 210 236 ACAGGCAC--CAAGA---UGGGACACCAU ||||| ||||| |: :||||| --ACCGUGCCGUUCUGUCAUGUUGUGGG- Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-146 32 64 UUGGGUACCUUAA---------GUCAA-GAGU |:|||||| ||||| ||| CAUCCAUGGCUGAGAGUUUAAGCAGUUACUCC Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-150 483 514 GUGA--CCAUG-------UUCCCAACCCUCU- ||| ||||: |||||| || ||: GACUUGGGUAUUGAGGUGAAGGGU-GGCAGGA Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-153 152 177 AGUGAAA--ACACUGA---UACGUU |:||| ||||:| ||||| GCGCUUCUCUGUGGCGCUGAUGCAC Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-17 620 643 UGAUG-GACGUGACAU-UCGUGAAAC |:| |||| ||| ||||||| -AUGCUCUGC-CUGGUCAGCACUUC- Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-18 601 623 AUAGACGUGA---UCUACGUGGAAU |||||||: :||||||: CAUCUGCAUGGACGGAUGCAUG--- Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-189 516 548 -UGACUA---UAGUCGA---GUCAU--CCGUG ||||| :| :|| ||||| |||| GACUGAGAGAGUGGGCGCGACAGUAGUGGCAA Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-194 33 62 -AGGUGU--AC-CUCAA---CGACAAUGU ||||:: || ||||| || ||||| AUCCAUGGCUGAGAGUUUAAGCAGUUACU Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-19a 190 209 AGUCAAAACG-UAUCUAAACGUGU |||| |||||||||:|| -----CUUGCAAUAGAUUUGUACU Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-204 495 518 -UCCGUAUCCUACUGU--UUCCCUU |||: |||:||:|| |||| GAGGUGAAGGGUGGCAGGAAGGA-- Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-205 481 507 GUCUGAGGCCAC--CU-UACUUCCU- |||||: ||| || :||||||: AAGACUUGGGUAUUGAGGUGAAGGGU Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-206 562 595 -GGUGUGUG---------AAGGAAUGUAAGGU- :||||:|| ||:||| : ||| AUCACAUACAGUUCCACUUUUCUUUGGGGCCAU Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-20a 624 643 -GAUGGACGUGAUAUUCGUGAAAU ||:|||| | ||||||| UCUGCCUGGUC----AGCACUUC- Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-20b 623 643 UGGACGUGAUAC-UCGUGAAAC :|||| ||: ||||||| CUCUGC-CUGGUCAGCACUUC- Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-210 158 180 -AGUCGGCGACAGUGUGCGUGUC- || |: || | |:|||||| CUCUGUGGCG--CUGAUGCACAGA Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-211 495 518 -UCCGUUUCCUACUGU--UUCCCUU |||::||||:||:|| |||| GAGGUGAAGGGUGGCAGGAAGGA-- Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-212 506 530 -CCGGCA---CUGAC-CUCUGACAAU ||| | ||||| |||| || UGGCAGGAAGGACUGAGAGAGUGG-- Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-217 243 261 UAGGUCAGUCAAGGACUACGUCAU ||| ||||||| ||||| -ACCAU---GUUCCUG-UGCAGG- Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-22* 494 521 -UUUCGAA---CGGUGA-CUUCUUGA- :|:|: |: :| ||||:||| UGAGGUGAAGGGUGGCAGGAAGGACUG Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-24 649 668 GACAAGGACGACU-UGACUCGGU ||||||||: :||| ||| ---CUCCUGCUGGUGCUG-GCCU Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-26a 360 379 CGGAUAGGACCUAAUGAACUU- |:||||| ||||||| --AUGUCCUGUUC-ACUUGAAA Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-26b 360 379 UUGGAUAGGACUUAAUGAACUU- |:||||| ||||||| ---AUGUCCUGUUC-ACUUGAAA Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-292-3p 619 643 -UGUGAGUUUUGGACC-GCCGUGAA- |::||| :||||| | |||||| CAUGCUCU--GCCUGGUCAGCACUUC Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-297 284 309 GUACGUAUGUACGUG---UGUAUGUA ||||||:|||||| ||||:|: -CUGCAUAUAUGCACAUUACAUGCGG Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-298 586 609 CCUUCUUGU--CGGGAGG-AGACGG :|::| |:||||| ||||| --UGGGGCCAUGUCCUCCAUCUGCA Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-299 225 248 -UACAUACACCCUGCCAUUUGGU- |||| ||||||| || ||||| CAUGU-UGUGGGAGGGCUAACCAU Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-29c* 68 90 -CUUGUGGUCCUC-UUUAGCCAGU |:|:|:| |||| || :||| AGGAUAUC-GGAGCAACAUGGUG- Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-30a-3p 17 49 -CGACGU------UUGUAGG--CUGACUUUC- ||| || :|||||| |:||||:|| AGCUCCAGAGGAAGACAUCCAUGGCUGAGAGU Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-30a-5p 248 274 GAAGGUCA-GCUC-CUACA-AAUGU- |||| || | :| ||||| ||||: GUUCCUGUGCAGGUGAUGUGUUACGU Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-30d 248 274 GAAGGUCA-GCCC-CUACA-AAUGU- |||| || | || ||||| ||||: GUUCCUGUGCAGGUGAUGUGUUACGU Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-30e 249 274 -AGGUCA-GUUC-CUACA-AAUGU- ||| || ||:| ||||| ||||: UUCCUGUGCAGGUGAUGUGUUACGU Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-31 645 669 -GUCGAU-ACGGUCGUAGAACGGA- ||||| |||::|:: || |||| ACAGCUCCUGCUGGUG-CUGGCCUU Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-322 226 252 -ACAACG---UCGCGAA--GUACAAA |||||: || ||| |||||| AUGUUGUGGGAGGGCUAACCAUGUUC Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-324-5p 589 621 UGUGGUUACGGGAU---------CC--CCUACGC :|| |||:||| || |||||| -GGCC-AUGUCCUCCAUCUGCAUGGACGGAUGCA Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-325 635 660 -UGUGAA-UGACUCGUGGAUGAUCC :||||| || ||| |||:||:| AGCACUUCACACAGCUCCUGCUGGU Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-326 505 526 UGACC-UCCUUCCCGGGUCUCC ||| ||||||| |: |||| -GUGGCAGGAAGGACUGAGAGA Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-327 78 100 -UGGG--AGUACGGGGAGUUCC :| | :||:||||:|:| AGCAACAUGGUGUCCCUUAGGC Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-328 510 536 UGCCUUCCCG----UCUCUCCCG-GUC |||||| | |||| |||| |: -AGGAAGGACUGAGAGAGUGGGCGCGA Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-331 513 554 AAGAUCCU---------AUCCGGG-------------UCCCCG |||| |:||| | |||||| ---AAGGACUGAGAGAGUGGGCGCGACAGUAGUGGCAAGGGGCG Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-336 481 510 -UCUG-AUCUAUA----C-CUUCCCACU- |||| |:|:||| | ||||||||: AAGACUUGGGUAUUGAGGUGAAGGGUGGC Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-338 632 666 -AGUUGUUUUAG-----------UGACUACGACCU |||:|| || :|||:|||||| GUCAGCACU-UCACACAGCUCCUGCUGGUGCUGGC Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-342 212 238 CUGCCCACGCUAAAGACA------CACUCU- |||| |||||| |||:|| ----CGUGCCG-UUCUGUCAUGUUGUGGGAG Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-346 503 539 -UCUCCGUCCG---UGA-------GUCCGU-CUGU- :| |||||| ||| ::|||: |||| GGGUGGCAGGAAGGACUGAGAGAGUGGGCGCGACAG Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-34b 630 652 GUUAGUCGAUUAAUGUGACGGAU ::||||| |||| ||: UGGUCAGCACUUCACACAGCUC- Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-34c 105 134 -CGUUAGUCGA--UUG-AUGUGA--CGGA ||:||||| ||| |||||| ||: GGCGAUCAGACACAACUUACACUUGGCUC Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-365 537 557 -UAUU-CCUAAAAAUCCCCGUAAU :||: || ||||||:|| AGUAGUGGCA----AGGGGCGUUU Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-370 241 263 -UUGGUCCAAGGUGGGGUCGUCCG- ||||| ||||| : |||||: UAACCAUGUUCCUGU---GCAGGUG Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-378 507 532 UGUGUCCUG---GAC-CUCAGUCCUC :||||| ||| ||| ||: -GGCAGGAAGGACUGAGAGAGUGGGC Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-382* 446 469 -UUCAC----AACAGGCACUUACUAA ||||| ||||||| ||||| UAAGUGCCCUUUGUCCG-GAAUGU-- Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-409-5p 227 247 GUUUCAACGAG--CCC-AUUGGA ||||: ||| ||||| ---UGUUGUGGGAGGGCUAACCA Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-412 475 505 UGCCGAUC----ACCU---GGUCCACUUCA |||:|| |||: : |||||||| UCGGUUAAGACUUGGGUAUUGAGGUGAAGG Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-422b 1 26 CGGAAG----ACUGAGGUUCAGGUCA || ||:|||:|: ||||| -ACUGGAAUAUGGCUCUAGCUCCAGA Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-424 598 626 -AGGUUU-UGUACUUA---ACG-ACGAC |||| :||||:| ||| |||| CUCCAUCUGCAUGGACGGAUGCAUGCUC Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-448 585 610 UACCCUG---UAGGAUGUAUACGUU ||||:| :|||| ||| |||| UUGGGGCCAUGUCCUCCAUCUGCAU Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-483 479 531 UGUUCUG--CCC-----------UCCC------------- CUC CUCACU :||||| ||| |||| ||| |||||: UUAAGACUUGGGUAUUGAGGUGAAGGGUGGCAGGAAGGACUGAGAGAGUGGG Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-497 635 665 AUGUUUG--GUGUC----AC-ACGACGAC- :|| ||||| || || ||||| AGCACUUCACACAGCUCCUGCUGGUGCUGG Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-542-3p 53 72 AAGUCAAUAGUUAGACAGUGU- |||||| | |||||| : -GCAGUUA-CUC-CUGUCAGGA Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-542-5p 81 99 GCACUGUACUACUAGGGGCUC- |||||:|| ||||: || ---AACAUGGUG-UCCCUUAGG Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-543 446 471 UCUUCACGU------GGCGCUUACAAA |||||| ||| ||||||| -UAAGUGCCCUUUGUCCG-GAAUGUUG Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-93 601 621 GAUGGACGUGCUUGUC-GUGAAAC |:|||||:|:||:| ::| -CAUCUGCAUGGACGGAUGCA--- Fbxo28; Fbxo28_predicted; rCG_20120 rno-let-7i 612 632 UGUC-GUGUUUGAUGAUGGAgu ||:| ::|| :|| ||:||| ACGGATGCATGCT-CTGCCTgg Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-101b 643 665 gaaGUCGAUAGUG-UCAUGACau ||||| ::| :||:||| acaCAGCTCCTGCTGGTGCTGgc Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-106b 623 643 uAGACGUGACAGUCGUGAAau ||||| : |||||||||| cTCTGCCTGGTCAGCACTTca Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-107 643 665 acUAUCG-GGACAUGUUACGACga | ||| |||| :::||||| acACAGCTCCTG-CTGGTGCTGgc Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-122a 632 653 uguUUGUGGUAACAGUGU-GAGGu |:||| || |||| |||| gtcAGCAC--TTCACACAGCTCCt Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-129* 221 242 uAC-GAAAAACCCCAUUCCCGAa || | | ||| || :|||||| cTGTCATGTTGTGG-GAGGGCTa Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-135a 299 325 AGUGUAU-CCU--UAUUU-UUCGGuau |:||||: ||| |||| ||||| TTACATGCGGATTTTAAACAAGCCcat Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-138 633 650 cuaaGUGUUGUG-GUCGA ||| ||| ||||| tcagCACTTCACACAGCT Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-140* 208 236 acaGGCAC--CAAGAUGG---GACACCau ||||| |||||::| :||||| taaCCGTGCCGTTCTGTCATGTTGTGGga Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-150 472 493 gUGA-CCAUGUUCCCAACCCucu ||| ||| :||| ||||| gACTCGGT-TAAGACTTGGGtat Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-17 619 643 ugAUG-GACGUGACAUUCGUGAAac |:| |||| : || ||||||| caTGCTCTGCCTGGTCAGCACTTca Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-18 622 643 auAGACGUGAUC-UACGUGGAau ||||| ||:| ||||:| gcTCTGC-CTGGTCAGCACTTca Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-189 517 533 UGACUAUAGUCGAGUCAUCCGUG ||||| || |||:|||:| ACTGA---GAG---AGTGGGCGC Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-194 34 61 AGGUGU--AC-CUCAA---CGACAAUGu ||||:: || ||||| || ||||| TCCATGGCTGAGAGTTTAAGCAGTTACt Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-19a 185 208 agucaaAACG-UAUCUAAACGUGu |||| |||||||||:|| ctttccTTGCAATAGATTTGTACt Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-204 482 507 UCCGUAUCC-UA---CUGUUUCCCuu || | |:|| || |:::||||| AGACTTGGGTATTGAGGTGAAGGGtg Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-206 557 577 GGUGUGUGAAG-GAAUGU-AAGGU ||| :|| || | |||| ||||| CCA-GCA--TCACATACAGTTCCA Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-20a 620 643 gAUG-GACGUGAUAUUCGUGAAau |:| |||| : :| ||||||| aTGCTCTGCCTGGTCAGCACTTca Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-20b 623 643 ugGACGUGAUACUCGUGAAac |||| : :| ||||||| ctCTGCCTGGTCAGCACTTca Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-210 149 178 AGUCG----GCGACA--GUG--UGCGUGUC || || | |||| |:| |:|||||| TCCGCGCTTCTCTGTGGCGCTGATGCACAG Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-211 496 519 UCCGUUUCCUACUG--UUUCCcuu |||::||||:||:| :|||| AGGTGAAGGGTGGCAGGAAGGact Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-212 503 523 CCGGCACUGACCU--CUGACaau || |||:| ||| ||||| GG--GTGGCAGGAAGGACTGaga Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-214 625 658 GACGGA-CAGAC----A------C--GGACGACa |||||| ||| | | | ||||||| CTGCCTGGTCAGCACTTCACACAGCTCCTGCTGg Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-217 238 261 uaGGUCAGU-CAAGGACUACGUCau |:| || |||||| :||||| ggCTAACCATGTTCCT-GTGCAGgt Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-22* 500 519 uUUCGAACGGUGACUUCUUGA ||| || || ||||:||| gAAGGGTGGCA-GGAAGGACT Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-24 646 667 GACAAGGACGACU-UGACUCGGu | | ||||||||: :||| ||| CAGCTCCTGCTGGTGCTG-GCCt Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-26a 358 377 cggAUAGGACCUAAUGAACUU |:|||| | | ||||||| aaaTGTCCT-GTTCACTTGAA Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-26b 357 377 UUGGAUAGGACUUAAUGAACUU || |:||||| | ||||||| AAAATGTCCTG-TTCACTTGAA Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-291-3p 617 642 cCGUGUGUUUC--ACC-UUCGUGAAa |||::| | ||| ||||||| tGCATGCTCTGCCTGGTCAGCACTTc Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-292-3p 620 641 UGUGAGUUUUGGACC-GCCGUGAA |::||| :||||| | |||||| ATGCTC--TGCCTGGTCAGCACTT Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-297 550 572 guaCGUAUGUACGU-GUGUAUGUa |: | || ||| |||||||| ggcGTTTCCA-GCATCACATACAg Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-297 283 308 guACGUAUGUACGUG---UGUAUGua ||||||:|||||| ||||:| tcTGCATATATGCACATTACATGCgg Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-298 587 608 CCUUCUUGU-CGGGAGG-AGACGg || |: || |:||||| ||||| GG--GGCCATGTCCTCCATCTGCa Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-298 606 630 CCUUCUUGUC--GGGAGGAGACGG- | | |:||:| | | ||||||| GCATGGACGGATGCATGCTCTGCCT Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-299 226 246 UACAUACACCCUGCCAUUUGGU |||| ||||||| || ||||| ATGT-TGTGGGAGGGCTAACCA Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-29a 642 663 uUG-GCUAAAGUCUACCACGAu || | : | | | ||||||| cACACAGCTCCTGCTGGTGCTg Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-29b 642 663 uUGUGACUAAAGUUUACCACGAu |||| | | | : ||||||| cACACAG-CTCCTGCTGGTGCTg Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-29c* 57 80 cuUGUGGUC-CUCUU-UAGCCagu || || | ||:| ||||| ttACTCCTGTCAGGATATCGGagc Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-30a-3p 24 47 cgaCGUUUGUAGG--CUGACUUUC | |:|||||| |:||||:|| gagGAAGACATCCATGGCTGAGAG Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-30e 250 272 AGGUCA-GUUC-CUACA-AAUGu ||| || ||:| ||||| |||| TCCTGTGCAGGTGATGTGTTACg Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-31 646 667 GUCGA-UACGGUCGUAGAACGGA ||||| |||::|: || |||| CAGCTCCTGCTGGT-GCTGGCCT Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-324-5p 597 620 uGUGGU-UACGGGAUCCCCUACGc | ||| ||| : : |||||| cCTCCATCTGCATGGACGGATGCa Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-325 636 659 uGUGAA-UGACUCGUGGAUGAUCc ||||| || ||| |||:||:| gCACTTCACACAGCTCCTGCTGGt Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-326 504 525 ugACC-UCCUUCCCGGGUCUCc ||| ||||||| |: |||| ggTGGCAGGAAGGACTGAGAGa Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-327 81 99 UGGGAGUACGGGGAGUUCc | | | :||:||||:|:| AACATGGTGTCCCTTAGGc Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-328 509 534 ugCCUUCCCG----UCUCUCCCGguc |||||| | |||| |||| caGGAAGGACTGAGAGAGTGGGCgcg Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-331 531 552 aaGAUCCUAUC-CGGGUCCCCG | | :||| | | |||||| cgCGACAGTAGTGGCAAGGGGC Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-336 482 508 UCUG-AUCUAUA----C-CUUCCCACu |||| |:|:||| | |||||||| AGACTTGGGTATTGAGGTGAAGGGTGg Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-338 641 665 AGU-UGUUUUAG-UGACUACGACCu ||| |||: | :|||:|||||| TCACACAGCTCCTGCTGGTGCTGGc Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-342 208 238 cugccCACGCUAA---AG----ACACACUCu |||| :|| || |||| ||| taaccGTGCCGTTCTGTCATGTTGTGGGAGg Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-345 622 638 CGUGACCUGAUCCCCAGUCGU || || | || |||||||| GCTCT-GCCT---GGTCAGCA Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-346 504 537 uCUCCGUC---CGUGAGU-------CCGU-CUGU | ||||| | ||| | |||: |||| gGTGGCAGGAAGGACTGAGAGAGTGGGCGCGACA Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-34b 609 631 guuaGUCGAUUAAUGUGACGGAu |:| |: |:| |||||| tggaCGGATGCATGCTCTGCCTg Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-34c 106 133 CGUUAGUC-G-AUUG-AUGUGA--CGga ||:||||| | ||| |||||| || GCGATCAGACACAACTTACACTTGGCtc Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-365 535 556 uauuccuaaaaaUCCCCGUAAu ||||||:|| acagtagtggcaAGGGGCGTTt Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-370 242 261 UUGGUCCAAGGUGGGGUCGUCCg ||||| ||||| : ||||| AACCATGTTCCTGT---GCAGGt Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-378 51 72 UGUGUCCUGGACCUCAGUCCUc | :||| || ||||||| AAGCAGTTACTCCTGTCAGGAt Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-378 493 514 uguguccuggaCCUCAGUCCUc || | ||||| ttgaggtgaagGGTGGCAGGAa Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-382* 447 470 UUCAC----AACAGGCACUUACUAa ||||| ||||||| ||||| | AAGTGCCCTTTGTCCG-GAATGTTg Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-409-3p 67 86 ccCCAAGUGGCUCGUUGUAa || | | ||||||||| caGGATATCGGAGCAACATg Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-409-5p 224 246 guUUCAACG--AGCCC-AUUGGa | ||||: ||| ||||| tcATGTTGTGGGAGGGCTAACCa Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-412 475 504 uGCCGA-UC---ACC--UGG-UCCACUUCa |||:| || ||| |:: |||||||| tCGGTTAAGACTTGGGTATTGAGGTGAAGg Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-422b 4 25 cggaAGACUGAGGUUC-AGGUCa | ||:|||: || ||||| ggaaTATGGCTCT-AGCTCCAGa Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-424 599 625 AGGU-UUUGUACUU---AACG-ACGAc |||| :||||:| ||| |||| TCCATCTGCATGGACGGATGCATGCTc Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-483 503 529 uguuCUGCCCUCCC---CUC-CUCACu |:| ||| || ||| ||||| gggtGGCAGGAAGGACTGAGAGAGTGg Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-483 530 554 uGUUCUGCCCUCCCC--UCCUCACu |: ||| | || || |||:| | gCGCGACAGTAGTGGCAAGGGGCGt Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-542-3p 52 70 aaGUCAAU-AGUUAGACAGUgu |||||| || |||||| agCAGTTACTC---CTGTCAgg Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-542-5p 78 97 gcacUGUACUACUAGGGGCUC |||||:|| ||||: || agcaACATGGTG-TCCCTTAG Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-543 445 470 ucUUCACG------UGGCGCUUACAAa |||||| ||| ||||||| ctAAGTGCCCTTTGTCCG-GAATGTTg Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-93 620 643 gAUG-GACGUGCUUGUCGUGAAac |:| |||| :|: |||||||| aTGCTCTGCCTGGTCAGCACTTca Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-214 651 658 ---------GACGGACAGACAC-------------GGACGACA ||||||| ||||||| AUGCAUGCUCUGCCUGGUCAGCACUUCACACAGCUCCUGCUGG Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-291-3p 635 642 C-----------------CGUGUGUUUC--ACCU-UCGUGAAA |||::| ||| ||||||| CCAUCUGCAUGGACGGAUGCAUGCUCUGCCUGGUCAGCACUUC Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-297 565 572 GUA------------------CGUAU--GUACGU-GUGUAUGUA ||:| || ||| |||||||| GCGCGACAGUAGUGGCAAGGGGCGUUUCCA-GCAUCACAUACAG Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-29a 656 663 U-----UGGCUAAAGUCU------------------ACCACGAU :|| |||| |||||||: UGCUCUGCCUGG-UCAGCACUUCACACAGCUCCUGCUGGUGCUGG Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-29b 656 663 --------------UUGUGACUAAAGUUU------ACCACGAU |:|||| ||: |||||||: UGCUCUGCCUGGUCAGCACUUCACACAGCUCCUGCUGGUGCUGG Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-322 224 231 ACA----------------------ACGUCGCGA-AGUACAAA ||| |: || ||||||| CCUUGCAAUAGAUUUGUACUAACCGUGCCGUUCUGUCAUGUUG Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-336 501 508 ----------------UCUGA-UCUAUA----C-CUUCCCACU ||||| :|:||| | ||||||||: UGUUGAGACUCGGUUAAGACUUGGGUAUUGAGGUGAAGGGUGGC Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-345 631 638 ----------CGUGACCUGAUCC---------------CCAGUCGU ||| ||||| || |||||||| UCCUCCAUCUGCA-UGGAC--GGAUGCAUGCUCUGCCUGGUCAGCAC Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-378 65 72 UG---------------------UGUCCUGGACCUCAGUCCUC :||| || ||||||| GACAUCCAUGGCUGAGAGUUUAAGCAGUUACUCCUGUCAGGAU Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-409-3p 79 86 CC-----------------------CCAAGUGGCUCGUUGUAA || | ||||||||| AGAGUUUAAGCAGUUACUCCUGUCAGGAUAUCGGAGCAACAUG Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-412 497 504 U-------------GCCGAU-C---ACCU---GGUCCACUUCA |||:|| | |||: : |||||||| GGAAUGUUGAGACUCGGUUAAGACUUGGGUAUUGAGGUGAAGG Fbxo28; Fbxo28_predicted; rCG_20120 rno-miR-543 463 470 UC-----------------UUCACGU------GGCGCUUACAAA |||||| ||| ||||||| UUGACUUUUUGUUUGUUCUAAGUGCCCUUUGUCCG-GAAUGUUG

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Fbxo28 RAID00301327 rno-miR-592 miRNA MIMAT0012834 Fbxo28 mRNA 305105 Prediction 0.1828 Fbxo28 RAID00634740 rno-miR-322-3p miRNA MIMAT0000547 Fbxo28 mRNA 305105 Prediction 0.1828 Fbxo28 RAID00895920 rno-miR-32-5p miRNA MIMAT0000811 Fbxo28 mRNA 305105 Prediction 0.1828 Fbxo28 RAID00949766 rno-miR-3557-3p miRNA MIMAT0017820 Fbxo28 mRNA 305105 Prediction 0.1828 Fbxo28 RAID00962279 rno-miR-211-3p miRNA MIMAT0017157 Fbxo28 mRNA 305105 Prediction 0.1828 Fbxo28 RAID01281717 rno-miR-351-3p miRNA MIMAT0017041 Fbxo28 mRNA 305105 Prediction 0.1828 Fbxo28 RAID01547775 rno-miR-3585-3p miRNA MIMAT0017879 Fbxo28 mRNA 305105 Prediction 0.1828 Fbxo28 RAID01889067 rno-miR-92b-3p miRNA MIMAT0005340 Fbxo28 mRNA 305105 Prediction 0.1828 Fbxo28 RAID02190974 rno-miR-448-3p miRNA MIMAT0001534 Fbxo28 mRNA 305105 Prediction 0.1828 Fbxo28 RAID02503535 rno-miR-26b-5p miRNA MIMAT0000797 Fbxo28 mRNA 305105 Prediction 0.1828 Fbxo28 RAID02572073 rno-miR-378a-5p miRNA MIMAT0003378 Fbxo28 mRNA 305105 Prediction 0.1828 Fbxo28 RAID02905476 rno-miR-152-5p miRNA MIMAT0017134 Fbxo28 mRNA 305105 Prediction 0.1828 Fbxo28 RAID02959593 rno-miR-335 miRNA MIMAT0000575 Fbxo28 mRNA 305105 Prediction 0.1828 Fbxo28 RAID03548172 rno-miR-26a-5p miRNA MIMAT0000796 Fbxo28 mRNA 305105 Prediction 0.1828 Fbxo28 RAID03602502 rno-miR-92a-3p miRNA MIMAT0000816 Fbxo28 mRNA 305105 Prediction 0.1828 Fbxo28 RAID03704108 rno-miR-873-5p miRNA MIMAT0005339 Fbxo28 mRNA 305105 Prediction 0.1828