DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000568 rno-miR-330* 54227 Arpc1b agagaCGUCCGGGAC---ACGAAACg | ||||: | ||||||| guuggGGAGGCUAAGGGCUGCUUUGc 2 19 51 76 [rn4:12:9796483-9796508:-] 0.5681 145 7 -22.11 -0.1184 MIMAT0000568 rno-miR-330* 54227 Arpc1b agagacguccgggacACGAAAcg |||||| ugccuuuuaaagagaUGCUUUca 3 9 175 197 [rn4:12:9796362-9796384:-] 0.5681 120 0 -9.02 -0.1581 MIMAT0000601 rno-miR-129* 54227 Arpc1b uacgaaaAACCCC----AUUCCCGAa |||||| |||||||| aaaggggUUGGGGAGGCUAAGGGCUg 2 16 45 70 [rn4:12:9796489-9796514:-] 0.5681 154 7 -21.88 -0.1846 MIMAT0000604 rno-miR-350 54227 Arpc1b caCUUUCACAUACC---CGAAAC-ACUu |::|| || || |||||| ||| ugGGGAGGCUAAGGGCUGCUUUGCUGAa 2 23 53 80 [rn4:12:9796479-9796506:-] 0.5681 125 0 -18.25 -0.4363 MIMAT0004717 rno-miR-29b-2* 54227 Arpc1b gauucggugguacacUUUGGUc |||||| gcuuucauucauugcAAACCAa 2 8 191 212 [rn4:12:9796347-9796368:-] 0.5681 120 6 -12.23 -0.2072 MIMAT0004719 rno-miR-30c-1* 54227 Arpc1b ccUCAUU-UGUUGGGAG-AGGGUc || |: :| ::|||| ||||| ugAGGAGUGCUGUCCUCAUCCCAc 2 21 5 28 [rn4:12:9796531-9796554:-] 0.5681 123 0 -25.33 -0.1780 MIMAT0004721 rno-miR-30b-3p 54227 Arpc1b cugcauuuGUAGGUGUAGGGUc ::||| ||||||| aggagugcUGUCCUCAUCCCAc 2 15 7 28 [rn4:12:9796531-9796552:-] 0.5681 154 7 -19.77 -0.1091 MIMAT0004726 rno-miR-101a* 54227 Arpc1b cguaGUCGUGA-CACUA-UUGACu || ::|| || || ||||| agcaCAAUGCUGGUCAUAAACUGc 2 19 233 256 [rn4:12:9796303-9796326:-] 0.5681 121 0 -15.02 -0.7302 MIMAT0000899 rno-miR-297 54227 Arpc1b guACGUAUGUACGUGUGUAUGua ||:: :| :| |||||| aaUGUGGGCUAAUAAACAUACca 3 22 262 284 [rn4:12:9796275-9796297:-] 0.5681 129 0 -9.71 -0.4487 MIMAT0005328 rno-miR-673 54227 Arpc1b gagguuccuggccuCGACACUc ||||||| --------------GCUGUGAg 2 9 1 8 [rn4:12:9796551-9796558:-] 0.5681 140 7 -18.84 -0.1204 MIMAT0012827 rno-miR-1224 54227 Arpc1b gagguggagggGUCAGGAGUg | ||||||| ugugaggagugCUGUCCUCAu 2 11 3 23 [rn4:12:9796536-9796556:-] 0.5681 142 7 -13.82 -0.1339 MIMAT0000553 rno-miR-324-5p 54227 Arpc1b ugUGGUUACG-GGAUCCCCUACGc || ::| : | ||||||||| guACAGGUCUGCAAAGGGGAUGCu 2 22 96 119 [rn4:12:9796440-9796463:-] 0.5681 152 7 -22.26 -0.3137 MIMAT0000581 rno-miR-338 54227 Arpc1b agUUGUUUUAGUGACUACGACCu | | ||| ||| ||||||| aaACCCAAAGCAC-AAUGCUGGu 2 22 225 246 [rn4:12:9796313-9796334:-] 0.5681 159 7 -17.52 -0.7246 MIMAT0000600 rno-miR-129 54227 Arpc1b cguucgggucuggcGUUUUUc |||||| cauucauugcaaacCAAAAAc 2 8 196 216 [rn4:12:9796343-9796363:-] 0.5681 120 6 -6.08 -0.1454 MIMAT0000781 rno-miR-9 54227 Arpc1b agUAUGUCGAUCUAUUGGUUUcu || || :|: | ||||||| ucAUUCA-UUGCA-AACCAAAaa 3 22 195 215 [rn4:12:9796344-9796364:-] 0.5681 133 0 -9.23 -0.1308 MIMAT0000781 rno-miR-9 54227 Arpc1b agUAUG-UC-GAUCUAUUGGUUUCu | || || | | | | |||||| aaAAACAAGACAAAAAACCCAAAGc 2 22 211 235 [rn4:12:9796324-9796348:-] 0.5681 123 6 -8.11 -0.1120 MIMAT0000792 rno-miR-23a 54227 Arpc1b ccuUUAGGGACCGUUACACua | |: || |||||| ccuAUUUAAUGAAAAUGUGcc 3 19 158 178 [rn4:12:9796381-9796401:-] 0.5681 126 0 -8.21 -0.1855 MIMAT0000793 rno-miR-23b 54227 Arpc1b ccAUUAGGGACCGUUACACua || |: || |||||| ccUAUUUAAUGAAAAUGUGcc 3 20 158 178 [rn4:12:9796381-9796401:-] 0.5681 131 0 -8.06 -0.1855 MIMAT0000828 rno-miR-124 54227 Arpc1b ccGUAAGUGGC----GCACGGAAu :|||:| :| :||||||| ccUAUUUAAUGAAAAUGUGCCUUu 2 19 158 181 [rn4:12:9796378-9796401:-] 0.5681 145 7 -15.22 -1.2426 MIMAT0000862 rno-miR-185 54227 Arpc1b agUCCUUGACGGAAAGAGAGGu |||:: || || ||||||| aaAGGGGAUG-CUCUCUCUCCa 2 21 108 128 [rn4:12:9796431-9796451:-] 0.5681 162 7 -24.97 -0.3343 MIMAT0000865 rno-miR-190 54227 Arpc1b uggAUUAUAUAGUUUGUAUAGu |:: || :||||||| | augUGGGCUAAUAAACAUACCa 2 20 263 284 [rn4:12:9796275-9796296:-] 0.5681 127 0 -9.58 -0.2042 MIMAT0000888 rno-miR-218 54227 Arpc1b uguaccaaucuagUUCGUGUu ||||||| gacaaaaaacccaAAGCACAa 2 9 219 239 [rn4:12:9796320-9796340:-] 0.5681 140 7 -10.88 -1.1185 MIMAT0001626 rno-miR-431 54227 Arpc1b acguacugccggacGUUCUGu |||||| uugcaaaccaaaaaCAAGACa 2 8 202 222 [rn4:12:9796337-9796357:-] 0.5681 120 6 -11.68 -0.3531 MIMAT0005302 rno-miR-190b 54227 Arpc1b uuggauuAUAGUUUGUAUAGu || :||||||| | ugugggcUAAUAAACAUACCa 2 15 264 284 [rn4:12:9796275-9796295:-] 0.5681 126 0 -10.36 -0.1986

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G098805 Arpc1b Rattus norvegicus 54227

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Arpc1b RAID00125799 rno-miR-331-5p miRNA MIMAT0017033 Arpc1b mRNA 54227 Prediction 0.1828 Arpc1b RAID00248528 rno-miR-129-5p miRNA MIMAT0000600 Arpc1b mRNA 54227 Prediction 0.1828 Arpc1b RAID00383485 rno-miR-431 miRNA MIMAT0001626 Arpc1b mRNA 54227 Prediction 0.1828 Arpc1b RAID00754986 rno-miR-338-3p miRNA MIMAT0000581 Arpc1b mRNA 54227 Prediction 0.2202 Arpc1b RAID01156718 rno-miR-9a-5p miRNA MIMAT0000781 Arpc1b mRNA 54227 Prediction 0.1828 Arpc1b RAID01247383 rno-miR-129-2-3p miRNA MIMAT0000601 Arpc1b mRNA 54227 Prediction 0.1828 Arpc1b RAID02261273 rno-miR-23b-3p miRNA MIMAT0000793 Arpc1b mRNA 54227 Prediction 0.1828 Arpc1b RAID02282467 rno-miR-185-5p miRNA MIMAT0000862 Arpc1b mRNA 54227 Prediction 0.1828 Arpc1b RAID02415733 rno-miR-190b-5p miRNA MIMAT0005302 Arpc1b mRNA 54227 Prediction 0.1828 Arpc1b RAID02423563 rno-miR-218a-5p miRNA MIMAT0000888 Arpc1b mRNA 54227 Prediction 0.1828 Arpc1b RAID02481717 rno-miR-324-5p miRNA MIMAT0000553 Arpc1b mRNA 54227 Prediction 0.1828 Arpc1b RAID02624697 rno-miR-190a-5p miRNA MIMAT0000865 Arpc1b mRNA 54227 Prediction 0.1828 Arpc1b RAID02960047 rno-miR-124-3p miRNA MIMAT0000828 Arpc1b mRNA 54227 Prediction 0.2202 Arpc1b RAID03558567 rno-miR-129-1-3p miRNA MIMAT0017120 Arpc1b mRNA 54227 Prediction 0.1828 Arpc1b RAID04024728 rno-miR-23a-3p miRNA MIMAT0000792 Arpc1b mRNA 54227 Prediction 0.1828