DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000568 rno-miR-330* 288710 Rnf10 agagacguccGGGACACGAAACg ::|||||||||| aucggguuucUUCUGUGCUUUGg 2 14 23 45 [rn4:12:42643476-42643498:+] 0.4922 157 7 -23.68 -0.4292 MIMAT0004712 rno-miR-23a* 288710 Rnf10 uuuaggguaggggUCCUUGGgg :|||||| uuccacaaagugaGGGAACCaa 3 10 117 138 [rn4:12:42643570-42643591:+] 0.6690 121 0 -15.01 -0.1112 MIMAT0004714 rno-miR-26b* 288710 Rnf10 cucgguucauuaccuCUUGUCc |||||| uaaguguuugaguuuGAACAGa 2 8 66 87 [rn4:12:42643519-42643540:+] 0.6248 120 6 -13.12 -0.1540 MIMAT0004728 rno-miR-124* 288710 Rnf10 uaGUUC-CAGGC-GACACUUGUgc :||| ||::| | |||||| uuUAAGUGUUUGAGUUUGAACAga 3 21 64 87 [rn4:12:42643517-42643540:+] 0.6248 134 0 -16.06 -0.1264 MIMAT0000893 rno-miR-290 288710 Rnf10 uuuUUCACGGGGGUAUCAAACUc |||||::: ||||||| uuuAAGUGUUU---GAGUUUGAa 2 21 64 83 [rn4:12:42643517-42643536:+] 0.6248 148 7 -14.16 -1.0809 MIMAT0003380 rno-miR-505 288710 Rnf10 ccuUUGGUCGUUCAC-AACUg ||:: :||||| |||| uguAAUUUUUAAGUGUUUGAg 2 18 57 77 [rn4:12:42643510-42643530:+] 0.6248 121 0 -10.60 -1.1310 MIMAT0005336 rno-miR-760-5p 288710 Rnf10 gcccgagaccaccggACUCCCc |||||| gggcuuuccacaaagUGAGGGa 2 8 112 133 [rn4:12:42643565-42643586:+] 0.6690 120 6 -19.33 -0.1372 MIMAT0012847 rno-miR-293 288710 Rnf10 guUUCACAGUGUGUCAAACUCa || | |:| | ||||||| guAAUUUUUA-AGUGUUUGAGu 2 21 58 78 [rn4:12:42643511-42643531:+] 0.6248 150 7 -10.55 -1.1792 MIMAT0012849 rno-miR-295 288710 Rnf10 cuucacacggggUGUAAACUCa :::|||||| uguaauuuuuaaGUGUUUGAGu 2 11 57 78 [rn4:12:42643510-42643531:+] 0.6248 126 6 -10.25 -0.1355 MIMAT0012853 rno-miR-761 288710 Rnf10 acacAGUCAAAGUGGGACGACg |::|||| : |||||| ugcuUUGGUUUGCUGCUGCUGu 2 19 38 59 [rn4:12:42643491-42643512:+] 0.5585 130 6 -14.98 -0.1255 MIMAT0001619 rno-miR-322 288710 Rnf10 agguuuuguACUUAACGACGAc ||: |||||||| ucugugcuuUGGUUUGCUGCUg 2 14 34 55 [rn4:12:42643487-42643508:+] 0.5585 153 7 -18.40 -0.7219 MIMAT0000552 rno-miR-301a 288710 Rnf10 cgaaacUGUUAUGAUAAC-GUGAc |:|| | ||||| |||| accaaaAUAA-AGUAUUGACACUc 2 18 181 203 [rn4:12:42643634-42643656:+] 0.5961 123 0 -8.13 -1.1234 MIMAT0000781 rno-miR-9 288710 Rnf10 aguaugucGAUCUAU-UGGUUUcu || || |||||| cagcuuccCUCUUUACACCAAAau 3 16 165 188 [rn4:12:42643618-42643641:+] 0.6690 122 0 -8.08 -0.1509 MIMAT0000784 rno-miR-15b 288710 Rnf10 acAUUUGGUACUACACGACGAu |: :|: ||:| ||||||| ucUGUGCUUUGGUUUGCUGCUg 2 21 34 55 [rn4:12:42643487-42643508:+] 0.5585 160 7 -18.30 -0.7181 MIMAT0000785 rno-miR-16 288710 Rnf10 gcgguuaUAAAUGCACGACGAu :|||:| ||||||| ugcuuugGUUUGC-UGCUGCUg 2 16 38 58 [rn4:12:42643491-42643511:+] 0.5585 153 7 -21.68 -0.6701 MIMAT0000846 rno-miR-141 288710 Rnf10 ggUAGAAAUGGUCUGUCACAau | :|||| | ||||||| aaAAUUUUA-AAUACAGUGUau 3 21 140 160 [rn4:12:42643593-42643613:+] 0.6690 138 0 -10.93 -0.2145 MIMAT0000848 rno-miR-142-3p 288710 Rnf10 aggUAUUUCAUCCUUUGUGA-UGu |||||||| :||||| || aaaAUAAAGUA-UUGACACUCACa 2 21 184 206 [rn4:12:42643637-42643659:+] 0.5961 130 0 -16.35 -1.0777 MIMAT0000870 rno-miR-195 288710 Rnf10 cgguuAUAAAGACACGACGAu |: ||: ||||||| ugcuuUGGUUUGCUGCUGCUg 2 17 38 58 [rn4:12:42643491-42643511:+] 0.5585 148 7 -16.70 -0.6990 MIMAT0000873 rno-miR-200c 288710 Rnf10 gguaguaaugggccgUCAUAAu |||||| uuuacaccaaaauaaAGUAUUg 2 8 176 197 [rn4:12:42643629-42643650:+] 0.5961 120 6 -8.95 -0.1664 MIMAT0000874 rno-miR-200a 288710 Rnf10 ugUAGCAAUGGUCUGUCACAau ||: ||| | ||||||| aaAUU-UUA-AAUACAGUGUau 3 21 141 160 [rn4:12:42643594-42643613:+] 0.6690 132 0 -8.33 -0.2165 MIMAT0000875 rno-miR-200b 288710 Rnf10 caguaguaaugguccgUCAUAAu |||||| cuuuacaccaaaauaaAGUAUUg 2 8 175 197 [rn4:12:42643628-42643650:+] 0.5961 120 6 -9.61 -0.1664 MIMAT0000887 rno-miR-217 288710 Rnf10 uaGGUCAGUCAAGGACUACGUCAu | || | ||:: || |||| acCAAGAAAAUUUUAAAUACAGUg 2 23 134 157 [rn4:12:42643587-42643610:+] 0.6690 122 0 -11.28 -0.1011 MIMAT0000896 rno-miR-292-5p 288710 Rnf10 guuuucucggggguCAAACUCa ||||||| uguaauuuuuaaguGUUUGAGu 2 9 57 78 [rn4:12:42643510-42643531:+] 0.6248 140 7 -10.20 -1.1879 MIMAT0000903 rno-miR-320 288710 Rnf10 agcgggagaguuGGGUCGAAaa :||||||| uacaguguauuuUCCAGCUUcc 3 11 151 172 [rn4:12:42643604-42643625:+] 0.6690 126 0 -12.57 -0.1248 MIMAT0001538 rno-miR-429 288710 Rnf10 ugccguaauggucugUCAUAAu |||||| uuuacaccaaaauaaAGUAUUg 2 8 176 197 [rn4:12:42643629-42643650:+] 0.5961 120 6 -9.61 -0.1664 MIMAT0003383 rno-miR-497 288710 Rnf10 auguuUGGUGUCACACGACGAc :|: ::|| ||||||| ucuguGCUUUGGUUUGCUGCUg 2 18 34 55 [rn4:12:42643487-42643508:+] 0.5585 153 7 -18.46 -0.7293

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G090725 Rnf10 Rattus norvegicus 288710

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Rnf10 RAID00192717 rno-miR-497-3p miRNA MIMAT0017230 Rnf10 mRNA 288710 Prediction 0.1828 Rnf10 RAID00321462 rno-miR-16-5p miRNA MIMAT0000785 Rnf10 mRNA 288710 Prediction 0.2202 Rnf10 RAID00505053 rno-miR-1297 miRNA MIMAT0035723 Rnf10 mRNA 288710 Prediction 0.1828 Rnf10 RAID00556022 rno-miR-301a-3p miRNA MIMAT0000552 Rnf10 mRNA 288710 Prediction 0.1828 Rnf10 RAID00661793 rno-miR-290 miRNA MIMAT0000893 Rnf10 mRNA 288710 Prediction 0.1828 Rnf10 RAID00668792 rno-miR-15b-5p miRNA MIMAT0000784 Rnf10 mRNA 288710 Prediction 0.2202 Rnf10 RAID00722068 rno-miR-200b-3p miRNA MIMAT0000875 Rnf10 mRNA 288710 Prediction 0.1828 Rnf10 RAID00835806 rno-miR-6331 miRNA MIMAT0025070 Rnf10 mRNA 288710 Prediction 0.1828 Rnf10 RAID00866429 rno-miR-200c-3p miRNA MIMAT0000873 Rnf10 mRNA 288710 Prediction 0.1828 Rnf10 RAID01139918 rno-miR-497-5p miRNA MIMAT0003383 Rnf10 mRNA 288710 Prediction 0.2202 Rnf10 RAID01649411 rno-miR-3541 miRNA MIMAT0017795 Rnf10 mRNA 288710 Prediction 0.1828 Rnf10 RAID01735858 rno-miR-141-3p miRNA MIMAT0000846 Rnf10 mRNA 288710 Prediction 0.1828 Rnf10 RAID02057309 rno-miR-142-3p miRNA MIMAT0000848 Rnf10 mRNA 288710 Prediction 0.1828 Rnf10 RAID02168370 rno-miR-217-5p miRNA MIMAT0000887 Rnf10 mRNA 288710 Prediction 0.1828 Rnf10 RAID02454100 rno-miR-200a-3p miRNA MIMAT0000874 Rnf10 mRNA 288710 Prediction 0.1828 Rnf10 RAID02564249 rno-miR-292-5p miRNA MIMAT0000896 Rnf10 mRNA 288710 Prediction 0.2202 Rnf10 RAID02817302 rno-miR-195-5p miRNA MIMAT0000870 Rnf10 mRNA 288710 Prediction 0.2202 Rnf10 RAID02846835 rno-miR-9a-5p miRNA MIMAT0000781 Rnf10 mRNA 288710 Prediction 0.1828 Rnf10 RAID03079561 rno-miR-293-5p miRNA MIMAT0012847 Rnf10 mRNA 288710 Prediction 0.1828 Rnf10 RAID03168095 rno-miR-429 miRNA MIMAT0001538 Rnf10 mRNA 288710 Prediction 0.1828 Rnf10 RAID03196385 rno-miR-15a-5p miRNA MIMAT0035728 Rnf10 mRNA 288710 Prediction 0.1828 Rnf10 RAID03467782 rno-miR-216b-3p miRNA MIMAT0017847 Rnf10 mRNA 288710 Prediction 0.1828 Rnf10 RAID03755532 rno-miR-320-3p miRNA MIMAT0000903 Rnf10 mRNA 288710 Prediction 0.1828 Rnf10 RAID03797764 rno-miR-322-5p miRNA MIMAT0001619 Rnf10 mRNA 288710 Prediction 0.2202