DNA & RNA Element - microRNA |
Mirbase Acc | miRNA Name | Gene ID | Gene Symbol | miRNA Alignment | Alignment | Gene Alignment | miRNA Start | miRNA End | Gene Start | Gene End | Genome Coordinates | Conservation | Align Score | Seed Cat | Energy | mirSVR Score |
MIMAT0004652 | rno-miR-342-5p | 304545 | Oasl | gagUUAGUGUCUAUC-GUGGGGa | |:||| : ||| |||||| | uaaAGUCA-GCCUAGUCACCCCu | 2 | 20 | 30 | 51 | [rn4:12:42956848-42956869:-] | 0.4558 | 121 | 6 | -19.42 | -0.1892 |
MIMAT0004739 | rno-miR-204* | 304545 | Oasl | uugcagGGAAAC--GGAAGGGUCg | |||||| :| |||||| | aaacaaCCUUUGUUUCCUCCCAGa | 2 | 17 | 409 | 432 | [rn4:12:42956467-42956490:-] | 0.5479 | 131 | 6 | -24.08 | -0.1602 |
MIMAT0000900 | rno-miR-298 | 304545 | Oasl | cccuucuugucgGGAGGAGACGg | |:|||||||| | ------------CUUCCUCUGCc | 2 | 12 | 1 | 11 | [rn4:12:42956888-42956898:-] | 0.4558 | 151 | 7 | -20.96 | -0.3361 |
MIMAT0003212 | rno-miR-20b-3p | 304545 | Oasl | ggUCUUCACGAGUGUGAC-GUCa | ||||| | |:|||| ||| | ccAGAAGGG--AAUACUGCCAGa | 2 | 21 | 89 | 109 | [rn4:12:42956790-42956810:-] | 0.4733 | 121 | 0 | -22.58 | -0.4267 |
MIMAT0003378 | rno-miR-378* | 304545 | Oasl | uguGUCCUGGACCUCAGUC-CUc | || || |||| ||||| || | ucuCAAGA-CUGG-GUCAGUGAa | 2 | 20 | 171 | 191 | [rn4:12:42956708-42956728:-] | 0.5174 | 123 | 0 | -17.87 | -0.1919 |
MIMAT0005327 | rno-miR-672 | 304545 | Oasl | aguGUGUGUCAUGUGGUUGGAGu | |||||| || ||||||| | cccCACACACACCAGCAACCUCc | 2 | 21 | 283 | 305 | [rn4:12:42956594-42956616:-] | 0.5479 | 168 | 7 | -26.85 | -0.2235 |
MIMAT0000573 | rno-miR-140 | 304545 | Oasl | gauGGUAUCCCA-UUUUGGUGAc | || |: | | ||||||| | uucCCCUGUGCUCCCAACCACUu | 2 | 20 | 326 | 348 | [rn4:12:42956551-42956573:-] | 0.5479 | 142 | 7 | -11.87 | -0.1214 |
MIMAT0000575 | rno-miR-335 | 304545 | Oasl | uguaaaaagcaauaaCGAGAACu | ||||||| | ggaauacugccagacGCUCUUGu | 2 | 9 | 96 | 118 | [rn4:12:42956781-42956803:-] | 0.4733 | 140 | 7 | -11.64 | -0.1917 |
MIMAT0000775 | rno-let-7b | 304545 | Oasl | uuGGUGUG---UUGGAUGAUG-GAGu | :||||| :|||| |||| ||| | aaUCACACCAGGACCU-CUACGCUCu | 2 | 21 | 149 | 173 | [rn4:12:42956726-42956750:-] | 0.5174 | 125 | 0 | -23.65 | -0.1532 |
MIMAT0000779 | rno-let-7i | 304545 | Oasl | uuGUCGUGUUUGAUGAUG-GAGu | || || :| || |||| ||| | caCACCAGGACCU-CUACGCUCu | 2 | 21 | 152 | 173 | [rn4:12:42956726-42956747:-] | 0.5174 | 122 | 0 | -14.09 | -0.1547 |
MIMAT0000780 | rno-miR-7b | 304545 | Oasl | uguugUUUUAGUGUUC-AGAAGGu | :||: || | | |||||| | cuuggGAAGCCAAACGAUCUUCCu | 2 | 19 | 226 | 249 | [rn4:12:42956650-42956673:-] | 0.5645 | 122 | 6 | -13.01 | -0.6620 |
MIMAT0000798 | rno-miR-27b | 304545 | Oasl | cgucUUGA-A--UCGGU-GACACUu | |||| | ||:|| |||||| | augaAACUCUGCAGUCACCUGUGAa | 2 | 18 | 125 | 149 | [rn4:12:42956750-42956774:-] | 0.5174 | 123 | 6 | -17.71 | -0.6481 |
MIMAT0000799 | rno-miR-27a | 304545 | Oasl | cgCCUUGA-A--UCGGU-GACACUu | | |||| | ||:|| |||||| | auGAAACUCUGCAGUCACCUGUGAa | 2 | 20 | 125 | 149 | [rn4:12:42956750-42956774:-] | 0.5174 | 125 | 6 | -19.35 | -0.6481 |
MIMAT0004729 | rno-miR-125a-3p | 304545 | Oasl | ccgaggguucuuggAGUGGACa | ||||||| | augaaacucugcagUCACCUGu | 2 | 9 | 125 | 146 | [rn4:12:42956753-42956774:-] | 0.5174 | 140 | 7 | -18.71 | -0.1842 |
MIMAT0000840 | rno-miR-134 | 304545 | Oasl | ggggagaccaguugGUCAGUGu | ||||||| | acaaugaaacucugCAGUCACc | 2 | 9 | 122 | 143 | [rn4:12:42956756-42956777:-] | 0.5174 | 140 | 7 | -16.68 | -0.2910 |
MIMAT0000842 | rno-miR-136 | 304545 | Oasl | agGUAGU---AGUUUUGUUUACCUCa | :|||| || ||||||||| | ggUAUCAAGUUCCUUUCAAAUGGAGa | 2 | 22 | 381 | 406 | [rn4:12:42956493-42956518:-] | 0.5479 | 152 | 7 | -18.84 | -0.9209 |
MIMAT0000844 | rno-miR-138 | 304545 | Oasl | gccggacuaaGUGU-UGUGGUCGa | |||| |||||||| | guuguuccccCACACACACCAGCa | 2 | 14 | 276 | 299 | [rn4:12:42956600-42956623:-] | 0.5798 | 156 | 7 | -19.28 | -0.9033 |
MIMAT0003123 | rno-miR-377 | 304545 | Oasl | gguuuUCAACGGAAACACACUa | || ||: |||||||| | cugccAGACGCUCUUGUGUGAc | 2 | 18 | 102 | 123 | [rn4:12:42956776-42956797:-] | 0.4733 | 157 | 7 | -19.45 | -0.3785 |
MIMAT0005341 | rno-miR-488 | 304545 | Oasl | cugguucuUUGUCGGAAAGUu | || ||||||| | aggguaucAAGUUCCUUUCAa | 2 | 14 | 379 | 399 | [rn4:12:42956500-42956520:-] | 0.5479 | 141 | 7 | -15.53 | -1.1654 |