DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000570 rno-miR-331 81667 Gnb2 aagauCCUAUCCGGGUCCCCg ||| | :||||||| gagguGGA-AACUCCAGGGGc 2 17 278 297 [rn4:12:19597388-19597407:-] 0.7815 146 7 -25.15 -1.0367 MIMAT0000599 rno-miR-349 81667 Gnb2 ucUCCAAUUCUGUCGU-CCCGAc |||| :| || || ||||| ggAGGUGGAAACUCCAGGGGCUg 2 21 277 299 [rn4:12:19597386-19597408:-] 0.7815 128 0 -24.53 -0.8015 MIMAT0000783 rno-miR-10b 81667 Gnb2 uguguuuaaGCCAAGAUGUCCc | | ||||||| ccucccuccCUGGGCUACAGGg 2 14 94 115 [rn4:12:19597570-19597591:-] 0.7815 141 7 -19.19 -0.1295 MIMAT0000783 rno-miR-10b 81667 Gnb2 uguguuuaagccaaGAUGUCCc ||||||| ugcccaugcccacaCUACAGGc 2 9 40 61 [rn4:12:19597624-19597645:-] 0.7132 140 7 -12.21 -0.3171 MIMAT0004712 rno-miR-23a* 81667 Gnb2 uuuAGGGUAGGGGUCCUUGGgg |:|||| ||||||| uuuUUCCAU--AAAGGAACCac 3 20 343 362 [rn4:12:19597323-19597342:-] 0.7815 132 0 -19.46 -0.4128 MIMAT0004717 rno-miR-29b-2* 81667 Gnb2 gauucgguGGUA-CACUUUGGUc |||| |:||||| caguuuuuCCAUAAAGGAACCAc 2 15 340 362 [rn4:12:19597323-19597345:-] 0.7815 129 0 -14.20 -0.1198 MIMAT0004726 rno-miR-101a* 81667 Gnb2 cguagucgugacacuAUUGACu |||||| aggggcuggcuuuuuUAACUGg 2 8 292 313 [rn4:12:19597372-19597393:-] 0.7815 120 6 -13.35 -0.4170 MIMAT0004740 rno-miR-218* 81667 Gnb2 gcgccACGAACUGUCUUGGUac | | | | :|||||| guuuuUCCAUAAAGGAACCAcu 3 18 342 363 [rn4:12:19597322-19597343:-] 0.7815 129 0 -8.88 -0.1503 MIMAT0004741 rno-miR-219-1-3p 81667 Gnb2 gcccugcaggucugcGUUGAGa |||||| uaaaggaaccacuucCAACUCu 2 8 351 372 [rn4:12:19597313-19597334:-] 0.7815 120 6 -16.96 -0.1328 MIMAT0000898 rno-miR-296* 81667 Gnb2 uguccuaacuCCCCCCCGGGa |||||||||| gguuccucucGGGGGGGCCCc 2 12 145 165 [rn4:12:19597520-19597540:-] 0.7815 155 7 -26.72 -0.1413 MIMAT0000899 rno-miR-297 81667 Gnb2 guacguauGUACGUGUGU-AUGUa ||||| |||| |||| gcccugccCAUGCCCACACUACAg 2 16 36 59 [rn4:12:19597626-19597649:-] 0.7132 131 0 -16.06 -0.1518 MIMAT0003116 rno-miR-501 81667 Gnb2 aaagugggucccUGUUUCCUaa |:|||||| uucaguuuuuccAUAAAGGAac 3 11 338 359 [rn4:12:19597326-19597347:-] 0.7815 126 0 -10.55 -0.1765 MIMAT0003121 rno-miR-483 81667 Gnb2 ugUUCUGCCCUCCCCUCCU-CACu |:|:| || || |||| ||| ggAGGGCCAGA-GGCAGGAGGUGg 2 22 262 284 [rn4:12:19597401-19597423:-] 0.7815 123 0 -22.04 -0.5674 MIMAT0003207 rno-miR-369-3p 81667 Gnb2 uuucuAGUUGGUACAUAAUAa |:|||:: || |||| cuuuuUUAACUG-GUUUUAUu 2 17 301 320 [rn4:12:19597365-19597384:-] 0.7815 122 0 -4.63 -0.1617 MIMAT0003207 rno-miR-369-3p 81667 Gnb2 uuucuAGUUGGUACAUAAUAa |:||:: | |||||| uuauuUUAAUU-UUUAUUAUa 2 17 316 335 [rn4:12:19597350-19597369:-] 0.7815 122 6 -2.72 -1.0207 MIMAT0005287 rno-miR-879 81667 Gnb2 ccgaaucucgauaUUCGGAGa ||||||| gggcacacaugccAAGCCUCc 2 9 78 98 [rn4:12:19597587-19597607:-] 0.7815 140 7 -15.54 -0.2224 MIMAT0005327 rno-miR-672 81667 Gnb2 agugUGUGUCAUGUGGUU-GGAGu :|||| |::|||| |||| cuggGCACA-CAUGCCAAGCCUCc 2 20 76 98 [rn4:12:19597587-19597609:-] 0.7815 125 0 -20.34 -0.3103 MIMAT0005333 rno-miR-742 81667 Gnb2 aaaUGGGUUGUACCACCGAAAg ||:| | : | ||||||| gaaACUCCAGGGGCUGGCUUUu 2 20 284 305 [rn4:12:19597380-19597401:-] 0.7815 155 7 -18.99 -0.7670 MIMAT0005333 rno-miR-742 81667 Gnb2 aaauggguuguaccACCGAAAg |||:||| cuggcuuuuuuaacUGGUUUUa 2 9 297 318 [rn4:12:19597367-19597388:-] 0.7815 124 0 -8.18 -0.2425 MIMAT0012823 rno-miR-490 81667 Gnb2 gucguaccucaggaGGUCCAAc ||||||| uccugcucccauacCCAGGUUu 2 9 123 144 [rn4:12:19597541-19597562:-] 0.7815 140 7 -12.24 -0.6100 MIMAT0012845 rno-miR-935 81667 Gnb2 cgccaucgccuucgccAUUGACc |||||| caggggcuggcuuuuuUAACUGg 2 8 291 313 [rn4:12:19597372-19597394:-] 0.7815 120 6 -17.25 -0.4170 MIMAT0012856 rno-miR-759 81667 Gnb2 caguuuuaacaaacgUGAGACg |||||| aaggaaccacuuccaACUCUG- 2 8 353 373 [rn4:12:19597312-19597332:-] 0.7815 120 6 -11.23 -0.1206 MIMAT0000564 rno-miR-328 81667 Gnb2 ugccuucccgucUCUCCCGGUc :|||||||| ccucaccccucuGGAGGGCCAg 2 11 250 271 [rn4:12:19597414-19597435:-] 0.7815 146 7 -21.17 -0.1227 MIMAT0000573 rno-miR-140 81667 Gnb2 gauGGUAUCCCAUUUUGGUGAc ||||| | :||||||| uuuCCAUAAAG--GAACCACUu 2 20 345 364 [rn4:12:19597321-19597340:-] 0.7815 152 7 -15.47 -0.6884 MIMAT0000608 rno-miR-351 81667 Gnb2 agUCCGAGUUUC-CCGAGGA-GUCCCu |||| :|:| || || ||||| agAGGCAGGAGGUGGAAACUCCAGGGg 2 24 270 296 [rn4:12:19597389-19597415:-] 0.7815 122 0 -26.35 -0.8255 MIMAT0000814 rno-miR-34c 81667 Gnb2 cguuagUCGAUUGAUGUG-ACGGa :|||:: |||| |||| cuuuggGGCUGGGCACACAUGCCa 2 18 68 91 [rn4:12:19597594-19597617:-] 0.7815 121 0 -17.51 -0.3635 MIMAT0000815 rno-miR-34a 81667 Gnb2 uguuggUCGAUUC-UGUG-ACGGu :|||::| |||| |||| cuuuggGGCUGGGCACACAUGCCa 2 17 68 91 [rn4:12:19597594-19597617:-] 0.7815 123 0 -21.90 -0.3693 MIMAT0000834 rno-miR-128 81667 Gnb2 uuUCUCUGGCCAAGUGACACu :|:|:|| ||||||| ggGGGGGCC--CCCACUGUGg 2 20 155 173 [rn4:12:19597512-19597530:-] 0.7815 144 7 -23.21 -0.1875 MIMAT0000848 rno-miR-142-3p 81667 Gnb2 agguauuucauccuuUGUGAUGu ||||||| gcccugcccaugcccACACUACa 2 9 36 58 [rn4:12:19597627-19597649:-] 0.7132 140 7 -13.96 -0.2365 MIMAT0000851 rno-miR-145 81667 Gnb2 ucCCUAAGGACCCUUUUGACCug || | || |||||| ggGGCUGGCUUUUUUAACUGGuu 3 22 293 315 [rn4:12:19597370-19597392:-] 0.7815 121 0 -17.75 -0.5012 MIMAT0003208 rno-miR-374 81667 Gnb2 gugaaucguccAACAUAAUAUa || ||||||| uuuauuuuaauUUUUAUUAUAu 2 12 315 336 [rn4:12:19597349-19597370:-] 0.7815 147 7 -4.27 -1.3456 MIMAT0003208 rno-miR-374 81667 Gnb2 guGAAUCGUCCAACAUAAUAUa :||| | |||| |||| || uuUUUAACUGGUUUUAUUUUAa 2 21 303 324 [rn4:12:19597361-19597382:-] 0.7815 140 0 -6.57 -0.2228 MIMAT0005284 rno-miR-874 81667 Gnb2 agccaGGGAG----CCCGGUC-CCGUc ||||| ||||||| |||| cucacCCCUCUGGAGGGCCAGAGGCAg 2 18 251 277 [rn4:12:19597408-19597434:-] 0.7815 128 0 -34.63 -0.1649 MIMAT0005311 rno-miR-410 81667 Gnb2 uguccggUAGACACAAUAUAa ||:| | |||||| uauuuuaAUUUUUAUUAUAUu 2 15 317 337 [rn4:12:19597348-19597368:-] 0.7815 126 6 -5.32 -0.5847

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G052029 Gnb2 Rattus norvegicus 81667

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Gnb2 rno-let-7e 74 103 -UGAUAUGU-----UGGA--GGAUGGAGU :||: :|| :|| ||| |||| GGCUGGGCACACAUGCCAAGCCUCCCUCC Gnb2 rno-miR-103 217 238 AGUAUCGGGACAU-GUUACGACGA |||||| | |||||| ---AAGCCCUCACCCUUUGCUGCC Gnb2 rno-miR-107 214 238 ACUAUCGGGACAU-GUUACGACGA || |||||| | |||||| GGAAAGCCCUCACCCUUUGCUGCC Gnb2 rno-miR-122a 55 93 -UGUUUGUGGU-----AACA-------GUGUGA--GGU- |||::| ||: ||| ||||| ||| UACAGGC-CCGGAGCUUUGGGGCUGGGCACACAUGCCAA Gnb2 rno-miR-125a 137 161 GUGUCCAAUUUCCC---AGAGUCCCU- |||||| || ||||:|||: -CCAGGUUU--GGUUCCUCUCGGGGGG Gnb2 rno-miR-125b 135 161 AGUGUUCAAUCCC---AGAGUCCCU- | ||:||| || ||||:|||: ACCCAGGUUUGGUUCCUCUCGGGGGG Gnb2 rno-miR-127 87 127 UCGGUUCG-AG---------------UCUG---CCUAGGCU ||||||| || :|:| ||:||| UGCCAAGCCUCCCUCCCUGGGCUACAGGGCCUUGGGUCCU- Gnb2 rno-miR-128a 154 175 UUUUCUCUGGCCAAGUGACACU- :::|:|:|| |||||||: CGGGGGGGCCCC--CACUGUGGA Gnb2 rno-miR-128b 154 175 CUUUCUCUGGCCAAGUGACACU- :::|:|:|| |||||||: CGGGGGGGCCCC--CACUGUGGA Gnb2 rno-miR-129* 230 252 UACGAAAA-ACCCCAUUCCCGAA |||| ||||| ||||| UUGCUGCCCUGGGGCCAGGGCC- Gnb2 rno-miR-133a 137 165 UGUC--GACCAAC-----UUCCCCUGGUU ||| :||||| ::||||:|| CCAGGUUUGGUUCCUCUCGGGGGGGCCC- Gnb2 rno-miR-133b 139 165 AUC-GACCAAC-----UUCCCCUGGUU :| :||||| ::||||:|| AGGUUUGGUUCCUCUCGGGGGGGCCC- Gnb2 rno-miR-139 156 176 -UCUGUGCACGUGACAUCU- :|: :| ||||||:|| GGGGGGCCCCCACUGUGGAG Gnb2 rno-miR-140* 140 175 ACAGGCACCAAGA----------UGGG----ACACCAU ||: |||||| :||| ||||| GGUU--UGGUUCCUCUCGGGGGGGCCCCCACUGUGGA- Gnb2 rno-miR-142-3p 346 369 -AGGUAUUUCAUCCUUUGUGAU-GU- ||||||| ||||| |||| || UUCCAUAA---AGGAACCACUUCCAA Gnb2 rno-miR-193 237 273 -GACCCUG--------------AAACA-UCCGGUCAA |||||:| | || :|||||| CCUGGGGCCAGGGCCUCACCCCUCUGGAGGGCCAGA- Gnb2 rno-miR-204 181 204 UCCGUAUCCUACUGU-UUCCCUU- |: :|||||: ::||||| -AGUCGGGGAUGGAAUGGGGGAAG Gnb2 rno-miR-205 173 203 GUCUG-----AGGCC--ACCUUACUUCCU- |||: || || ||||||| ||| GAGAUAAAAGUCGGGGAUGGAAUGGGGGAA Gnb2 rno-miR-207 245 284 UUCCCU-----------CCUCUCGGUC-C---UCUUCG- |||| ||||:||||| | :||:|: CAGGGCCUCACCCCUCUGGAGGGCCAGAGGCAGGAGGUG Gnb2 rno-miR-20b* 153 175 -GUCUUCACGAGUGUGACGUCA |:| | || | |||||::| UCGGGGGGGCCCCCACUGUGGA Gnb2 rno-miR-210 33 61 AGUCGGCGACAGUGUGCG-------UGUC- ||||| ||| | ||:|| |||| GCAGCC-CUGCC-CAUGCCCACACUACAGG Gnb2 rno-miR-211 181 204 UCCGUUUCCUACUGU-UUCCCUU- |: :|||||: ::||||| -AGUCGGGGAUGGAAUGGGGGAAG Gnb2 rno-miR-214 114 131 GACGG-ACAGACACGGACGACA ||| || || |||||| -GGCCUUGG--GU-CCUGCUC- Gnb2 rno-miR-24 228 248 GACAAGGACGACUUGA-CUCGGU- ::||||| || |:|||| ----CUUUGCUGCCCUGGGGCCAG Gnb2 rno-miR-27a 155 176 -CGCCUUGAAUCGGUGACACUU- | ||::| ||||||||:| GGGGGGGCCC--CCACUGUGGAG Gnb2 rno-miR-27b 157 176 CGUCUUGAAUCGGUGACACUU- :|::| ||||||||:| -GGGGGCCC--CCACUGUGGAG Gnb2 rno-miR-290 125 148 UUUUUCACGGGGGUA-----UCAAACUC |||:||||| :|||||: -----CUGCUCCCAUACCCAGGUUUGGU Gnb2 rno-miR-291-5p 154 175 UCUCUCCCGGAGGUGAAACUAC |:|:||||| ||||| ||: CGGGGGGGCCCCCACUGUGGA- Gnb2 rno-miR-292-3p 50 85 -UGUGA-------GUUUUGGA---CCG--CCGUGAA ||||| |::|:|: ||| ||||| CACACUACAGGCCCGGAGCUUUGGGGCUGGGCACA- Gnb2 rno-miR-296 137 166 UGUCCUAACU--------CCCCCCCGGGA |||| |||: |||||||||| CCAGGUUUGGUUCCUCUCGGGGGGGCCCC Gnb2 rno-miR-298 204 236 -CCUUCUUG-----UCGGGA---GGAGACGG- |||||::| |||||| |||:|||: AGGAAGGGCAGGAAAGCCCUCACCCUUUGCUG Gnb2 rno-miR-320 121 146 AAGCGGGA-GAGU---UGGGUCGAAAA |:||| ||| |||||| ||| --GGUCCUGCUCCCAUACCCAGGUUUG Gnb2 rno-miR-324-3p 226 251 -GGU--CGUCGUGGACCCC-GUCACC- || || || ||||||| ||| || CCCUUUGCUGC-CCUGGGGCCAG-GGC Gnb2 rno-miR-326 237 268 UGACCUCCUUCCCGGG---------UCUCC- ||||:| ||||||: :|||| CCUGGGGCCAGGGCCUCACCCCUCUGGAGGG Gnb2 rno-miR-327 218 251 -UGGGAGU--------ACGGGGA----GUUCC- :|||||| |||||: ||:|| AGCCCUCACCCUUUGCUGCCCUGGGGCCAGGGC Gnb2 rno-miR-328 238 273 UGCCU---UCCCGUC---------UCUCCCGGUC- :||: ||||| :||||||||| CUGGGGCCAGGGCCUCACCCCUCUGGAGGGCCAGA Gnb2 rno-miR-330 53 74 AGAGACGUCCGGGACACGAAACG || ||||||| | |||||| --ACUACAGGCCCGGAGCUUUGG Gnb2 rno-miR-331 258 299 AAGAUC-CUA----UCCG--------------GGUCCCCG |||:| |: |||| |||||||| CUCUGGAGGGCCAGAGGCAGGAGGUGGAAACUCCAGGGGCU Gnb2 rno-miR-337 269 302 -UUUCCGUAGUAUA---------UCCUCGACUU |:||||| :| |||:||||: CAGAGGCAGGAGGUGGAAACUCCAGGGGCUGGC Gnb2 rno-miR-339 234 251 ACUCGAGGACCUCCUGUCCCU || ||||| || ||||| --UGC-CCUGG-GGCCAGGGC Gnb2 rno-miR-340 167 195 CCGAUAUUUC-AUUGA----CUCUGCCU- ||:|::|| ||| |:||:||| -ACUGUGGAGAUAAAAGUCGGGGAUGGAA Gnb2 rno-miR-342 153 178 CUGCCCA--CGCUAAAGACACACUCU- |||| || ||||| |||| -UCGGGGGGGCCCCCACUGUG-GAGAU Gnb2 rno-miR-343 16 35 AGACCCGUGUGCC-UCCCUCU ||||| || || |||||| -AUGGGCCCA-GGCAGGGAGC Gnb2 rno-miR-346 269 303 -UCUCCGUCCG-------UGAG---UCCGUCUGU ||||||||| |||| :||| |:| CAGAGGCAGGAGGUGGAAACUCCAGGGGCUGGCU Gnb2 rno-miR-347 246 272 ACCCGC--UGGG----UCUCCCUGU- |||| |||| :||||| || AGGGCCUCACCCCUCUGGAGGGCCAG Gnb2 rno-miR-349 261 301 -UCUCCAA--UUCUGUCG--------------UCCCGAC- :|||| :||:||| :|||||| UGGAGGGCCAGAGGCAGGAGGUGGAAACUCCAGGGGCUGG Gnb2 rno-miR-34a 65 93 UUGUUGG----UCGAUUC-UGUG-ACGGU- |:|: :|||::| |||| ||||| --GAGCUUUGGGGCUGGGCACACAUGCCAA Gnb2 rno-miR-34c 25 51 -CGUUA---GUCGAUUGAUGUG-ACGGA |||: |||| ||:| |||| GGCAGGGAGCAGCC--CUGCCCAUGCCC Gnb2 rno-miR-351 137 161 -GUCCGAGUUUCCCGAGGAG--UCCCU- ||||:|: ||:||||| :|||: CCAGGUUU----GGUUCCUCUCGGGGGG Gnb2 rno-miR-363-5p 114 134 UUUAACGUAGCACUAGGU---GGGC || |:| |:||| ||| ----GGCCUUG-GGUCCUGCUCCCA Gnb2 rno-miR-370 241 280 -UUGGUCCAA-GGUGGGG--------------UCGUCCG ::||||| :|||||| :||||| GGGCCAGGGCCUCACCCCUCUGGAGGGCCAGAGGCAGGA Gnb2 rno-miR-378 242 282 -UGUGUCCUGG---------ACCUCA--------GUCCUC :| ||||:|| ||||| |||||| GGC-CAGGGCCUCACCCCUCUGGAGGGCCAGAGGCAGGAGG Gnb2 rno-miR-382 346 367 CUUAGGUGGUG-CUUGUUGAAG- ||||: |||| ||||| --UUCCAUAAAGGAACCACUUCC Gnb2 rno-miR-409-3p 71 89 CCCCAAGUGGCUCGU-UGUAA ||| :|:|:||| |||| UGGG---GCUGGGCACACAUG Gnb2 rno-miR-412 247 284 UGCCG----------AUCACCUGGUC-CA---CUUCA- ||| |:| ||:|||| | ||:|| -GGGCCUCACCCCUCUGGAGGGCCAGAGGCAGGAGGUG Gnb2 rno-miR-449 59 93 -UGG---UCGA----UUGUUAUGUG---ACGGU- :|| |||| ::| :||| ||||| GGCCCGGAGCUUUGGGGCUGGGCACACAUGCCAA Gnb2 rno-miR-483 270 302 UGUUCUGCCCUCC-CCU-------CCUC-ACU- :||:| ||||| ||| ||:| ||: -AGAGGCAGGAGGUGGAAACUCCAGGGGCUGGC Gnb2 rno-miR-485 222 255 CUUAAGUAGUG---------------CCGGU--CGGAGA |||| ||||| ||||| ------CUCACCCUUUGCUGCCCUGGGGCCAGGGCCUCA Gnb2 rno-miR-9 251 276 -AGUAUGUCGAUCUAUUGGUUUCU- ||| | ||:|| ::|||:||: CUCACCCCUCUGGAGGGCCAGAGGC Gnb2 rno-let-7e 79 102 ugaUAUGU-UGG--AGGAUGGAGu | ||| :|| ||| |||| ggcACACATGCCAAGCCTCCCTCc Gnb2 rno-miR-103 214 237 agUAUCGGGA-CAUGUUACGACGa | |||||| | |||||| ggAAAGCCCTCACCCTTTGCTGCc Gnb2 rno-miR-10b 94 115 uguguuuaaGCCAAGAUGUCCC | | |||||||| cctccctccCTGGGCTACAGGG Gnb2 rno-miR-122a 36 58 uguuuguGGUAACAGUGUGAGGU |||| |||||| || gccctgcCCATGCCCACACTACA Gnb2 rno-miR-125a 136 159 GUGUCCAAUUUCC---CAGAGUCCCu | |||||| || ||||:||| CCCAGGTT--TGGTTCCTCTCGGGGg Gnb2 rno-miR-127 101 127 ucGGUUCGA-GUCU----GCCUAGGcu |:::||| |||: :||:||| ccCTGGGCTACAGGGCCTTGGGTCCtg Gnb2 rno-miR-128a 154 173 uuuuCUCUGGCCAAGUGACACu |:|:|| ||||||| cgggGGGGCC--CCCACTGTGg Gnb2 rno-miR-128b 155 173 CUUUCUCUGGCCAAGUGACACu |:::|:| || ||||||| GGGGGGGCCC---CCACTGTGg Gnb2 rno-miR-129* 230 252 uACGA-AAAACCCCAUUCCCGaa |||| ||||| ||||| tTGCTGCCCTGGGGCCAGGGCct Gnb2 rno-miR-133a 137 165 uGUC--GACCA-----ACUUCCCCUGGuu ||| :|||| | ::||||:|| cCAGGTTTGGTTCCTCTCGGGGGGGCCcc Gnb2 rno-miR-133b 144 165 AUCGACCA-ACUUCCCCUGGuu |:|:| | | ::||||:|| TGGTTCCTCTCGGGGGGGCCcc Gnb2 rno-miR-135b 203 224 guguaUCCUUACUUUUCGGUAu |||: |:|||||| | gaggaAGGGCAGGAAAGCCCTc Gnb2 rno-miR-139 159 174 uCUGUGCACGUGACAUCU |:| | ||||||:|| gGGCCC--CCACTGTGGA Gnb2 rno-miR-140* 151 175 ACAGGCACCAAGAUGG-GACACCau | || | || | || |||||| TCTCGGGGGGGCCCCCACTGTGGag Gnb2 rno-miR-142-3p 347 366 AGGUAUUUCAUCCUUUGUGAUGu ||||||| ||||| |||| | TCCATAA---AGGAACCACTTCc Gnb2 rno-miR-193 245 273 GACCCUGA--------AACAUCCGGUCaa | ||| || | | :|||||| CAGGGCCTCACCCCTCTGGAGGGCCAGag Gnb2 rno-miR-193 230 249 gACCCUGAAACAUCCGGUCaa || :| || :|||||| tTGCTGCCCTG-GGGCCAGgg Gnb2 rno-miR-204 190 213 uCCGUA--UCCUACUGUUUCCCuu || || :||| || :||||| tGGAATGGGGGAAGAGGAAGGGca Gnb2 rno-miR-205 178 201 gUCUGAGGCC--ACCUUACUUCCU | | || || |||||||::||| aAAAGTCGGGGATGGAATGGGGGA Gnb2 rno-miR-207 259 284 uucCCUCC---UCUCGGUCCUCUUCg ||||| |||| ||||||: | tctGGAGGGCCAGAGGCAGGAGGTGg Gnb2 rno-miR-20b* 154 174 GUCUUCACGAGUGUGACGUCa |:|::| || | |||||::| CGGGGGGGCCCCCACTGTGGa Gnb2 rno-miR-211 190 213 uCCGU--UUCCUACUGUUUCCCuu || | ::||| || :||||| tGGAATGGGGGAAGAGGAAGGGca Gnb2 rno-miR-214 113 131 gaCGGACAGACAC-GGACGAca |||| || | |||||| ggGCCT---TGGGTCCTGCTcc Gnb2 rno-miR-24 222 246 GACAAGG--ACGACUUGA-CUCGGU || || ||||| || |:|||| CTCACCCTTTGCTGCCCTGGGGCCA Gnb2 rno-miR-27a 156 174 CGCCUUGAAUCGGUGACACUU | ||::| ||||||||:| GGGGGGC--CCCCACTGTGGA Gnb2 rno-miR-27b 154 174 cgucuugaaucGGUGACACUU ||||||||:| cgggggggcccCCACTGTGGA Gnb2 rno-miR-290 120 147 uuuuucACGGGGGUA-----UCAAACuc |||:||||| :||||| gggtccTGCTCCCATACCCAGGTTTGgt Gnb2 rno-miR-291-5p 154 175 uCUCUCCCGGAGGUGAAACuac |:|:||||| ||||| || cGGGGGGGCCCCCACTGTGgag Gnb2 rno-miR-292-3p 51 70 UGUGAGUUUUGGACCGCCGUGAA ||||| |::|| ||| :||| ACACTACAGGCC---CGGAGCTT Gnb2 rno-miR-296 137 165 uGUCCUAACU--------CCCCCCCGGGa |||| |||: |||||||||| cCAGGTTTGGTTCCTCTCGGGGGGGCCCc Gnb2 rno-miR-298 210 234 CCUUCUUGUCGGGA---GGAGACGg || ||:| |||||| |||:||| GGCAGGAAAGCCCTCACCCTTTGCt Gnb2 rno-miR-320 122 145 aAGCGGGAGAGU-UGGGUCGAAAa || : ||| || |||||| ||| gTCCTGCTCCCATACCCAGGTTTg Gnb2 rno-miR-324-3p 229 250 gguCGUCGUGGACCCC-GUCACc || || ||||||| ||| | tttGCTGC-CCTGGGGCCAGGGc Gnb2 rno-miR-326 259 274 uGACCUCCUUCCCGGGUCUCC |||||| || ||||||| tCTGGAG---GG--CCAGAGG Gnb2 rno-miR-327 248 264 ugGGAGUACGGGGAGUUCc ||||| |||||| :| ggCCTCA--CCCCTCTGGa Gnb2 rno-miR-328 239 271 ugCCU--UCCC---GU------CUCUCCCGGUC ||: |||| || :||||||||| tgGGGCCAGGGCCTCACCCCTCTGGAGGGCCAG Gnb2 rno-miR-330 51 73 aGAGACGUCCGGGACACGAAACg | || ||||||| | |||||| aCACTACAGGCCCGGAGCTTTGg Gnb2 rno-miR-331 272 297 aagaUCCUAU-CC----GGGUCCCCG |||| : || :|||||||| aggcAGGAGGTGGAAACTCCAGGGGC Gnb2 rno-miR-337 280 301 uuuCCGUAGUAUAUCCUCGACuu || | | | |||:|||| ggtGGAAAC-TCCAGGGGCTGgc Gnb2 rno-miR-339 229 250 acuCGA--GGACCUCCUGUCCCu ||| ||||| || ||||| tttGCTGCCCTGG-GGCCAGGGc Gnb2 rno-miR-340 172 193 CCGAUA-UUUCAUUGACUCUGCCU || || ||||| | |:||:||| GGAGATAAAAGT--CGGGGATGGA Gnb2 rno-miR-342 154 176 cugCCCACGCUAAAGACACACUCU ||| || ||||| |||| cggGGGGGCCCCCACTGTG-GAGA Gnb2 rno-miR-343 15 34 agACCCGUGUGCCUCCCUCu ||||| || | |||||| gaTGGGCCCAGGCAGGGAGc Gnb2 rno-miR-346 270 302 UCUCCGUCC-------GUGAG---UCCGUCUGu ||||||||| |||| :||| |:| AGAGGCAGGAGGTGGAAACTCCAGGGGCTGGCt Gnb2 rno-miR-349 277 299 uCUCCAAUUCUGUCGU-CCCGAC ||||| :| || || |||||| gGAGGTGGAAACTCCAGGGGCTG Gnb2 rno-miR-34a 67 91 uuguugguCGAUUC-UGUG-ACGGU |||::| |||| ||||| gctttgggGCTGGGCACACATGCCA Gnb2 rno-miR-34c 22 44 cGUUAGUCGAUUGAUGUGACGGa ||: ||| |:| :| ||||| cCAGGCAGGGAGCAGCCCTGCCc Gnb2 rno-miR-351 138 159 GUCCGAGUUUCCCGAG--GAGUCCCu ||||:|: ||:|| |||:||| CAGGTTT----GGTTCCTCTCGGGGg Gnb2 rno-miR-363-5p 115 139 uuuAACGUAGCACUAGG---UGGGc ||| :|| || ||| |||| gccTTGGGTCCTGCTCCCATACCCa Gnb2 rno-miR-370 242 267 uuGGUCCAAG-GUGGG--GUCGUCCg ||||| | ||||| | | ||| ggCCAGGGCCTCACCCCTCTGGAGGg Gnb2 rno-miR-378 260 280 ugugUCCUGGACCUCAGUCCUC |||:|| ||| |||||| ctggAGGGCC-AGAGGCAGGAG Gnb2 rno-miR-378 229 250 ugugucCUGGACCUCAGUCCuc | |||||:| |||| tttgctGCCCTGGGGCCAGGgc Gnb2 rno-miR-382 344 365 cuuAGGUG-GUGCUUGUUGAAG ||||: | |||| ||||| tttTCCATAAAGGAACCACTTC Gnb2 rno-miR-409-3p 72 88 CCCCAAGUGGCUCGU-UGUAa |||| |:|:||| |||| GGGG----CTGGGCACACATg Gnb2 rno-miR-412 264 287 UGCCGAUCACC-UGGUCCACUUca | ||| || || | |||||:| AGGGCCAGAGGCAGGAGGTGGAaa Gnb2 rno-miR-449 71 91 ugguCGAUUGUUAUGUG-ACGGU |||: :: |||| ||||| tgggGCTG--GGCACACATGCCA Gnb2 rno-miR-483 259 284 uGUUCUGCCC--UC-CCCUCCU-CACu | :|| ||| || || |||| ||| tCTGGA-GGGCCAGAGGCAGGAGGTGg Gnb2 rno-miR-485 231 254 cuuaaguagugCCGGU--CGGAGa ||||| ||||| tgctgccctggGGCCAGGGCCTCa Gnb2 rno-miR-9 252 274 AGUAUGUCGAUCUAUUGGUUUCu ||| | ||:|| ::|||:|| TCACCCCTCTGGAGGGCCAGAGg Gnb2 rno-miR-10b 108 115 -------UGUGUUUAA---------------GCCAAGAUGUCCC :|||| || :|| |||||||| GGGCUGGGCACACAUGCCAAGCCUCCCUCCCUGGG-CUACAGGGC Gnb2 rno-miR-128a 166 173 U-----------------------UUUCUCUGGCCAAGUGACACU :::|:|:|| |||||||: CCAUACCCAGGUUUGGUUCCUCUCGGGGGGGCCCC--CACUGUGGA Gnb2 rno-miR-128b 166 173 C-----------------------UUUCUCUGGCCAAGUGACACU :::|:|:|| |||||||: CCAUACCCAGGUUUGGUUCCUCUCGGGGGGGCCCC--CACUGUGGA Gnb2 rno-miR-296 158 165 U--------------GUCCUAACU--------CCCCCCCGGGA |||| |||: |||||||||| UCCUGCUCCCAUACCCAGGUUUGGUUCCUCUCGGGGGGGCCCC Gnb2 rno-miR-328 264 271 U---------GCCU---UCCCGUC---------UCUCCCGGUC :||: ||||| :||||||||| UUUGCUGCCCUGGGGCCAGGGCCUCACCCCUCUGGAGGGCCAGA Gnb2 rno-miR-331 290 297 AAGA-----------------UCCUAU-CC----GGGUCCCCG |||| || :|||||||| CCCCUCUGGAGGGCCAGAGGCAGGAGGUGGAAACUCCAGGGGCU

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Gnb2 RAID00461391 rno-miR-296-5p miRNA MIMAT0000898 Gnb2 mRNA 81667 Prediction 0.1828 Gnb2 RAID00482791 rno-miR-874-3p miRNA MIMAT0005284 Gnb2 mRNA 81667 Prediction 0.1828 Gnb2 RAID00578201 rno-miR-34c-5p miRNA MIMAT0000814 Gnb2 mRNA 81667 Prediction 0.1828 Gnb2 RAID01142959 rno-miR-128-3p miRNA MIMAT0000834 Gnb2 mRNA 81667 Prediction 0.1828 Gnb2 RAID01331650 rno-miR-23b-5p miRNA MIMAT0017099 Gnb2 mRNA 81667 Prediction 0.1828 Gnb2 RAID01644245 rno-miR-140-5p miRNA MIMAT0000573 Gnb2 mRNA 81667 Prediction 0.1828 Gnb2 RAID01830396 rno-miR-328a-3p miRNA MIMAT0000564 Gnb2 mRNA 81667 Prediction 0.1828 Gnb2 RAID01943524 rno-miR-145-5p miRNA MIMAT0000851 Gnb2 mRNA 81667 Prediction 0.1828 Gnb2 RAID01980829 rno-miR-490-3p miRNA MIMAT0012823 Gnb2 mRNA 81667 Prediction 0.1828 Gnb2 RAID02154249 rno-miR-34a-5p miRNA MIMAT0000815 Gnb2 mRNA 81667 Prediction 0.1828 Gnb2 RAID02766534 rno-miR-351-5p miRNA MIMAT0000608 Gnb2 mRNA 81667 Prediction 0.1828 Gnb2 RAID02826879 rno-miR-331-3p miRNA MIMAT0000570 Gnb2 mRNA 81667 Prediction 0.1828 Gnb2 RAID02921127 rno-miR-10b-5p miRNA MIMAT0000783 Gnb2 mRNA 81667 Prediction 0.1828 Gnb2 RAID02952867 rno-miR-142-3p miRNA MIMAT0000848 Gnb2 mRNA 81667 Prediction 0.1828 Gnb2 RAID03272909 rno-miR-374-5p miRNA MIMAT0003208 Gnb2 mRNA 81667 Prediction 0.2202 Gnb2 RAID03272923 rno-miR-410-3p miRNA MIMAT0005311 Gnb2 mRNA 81667 Prediction 0.1828 Gnb2 RAID03883372 rno-miR-134-3p miRNA MIMAT0017125 Gnb2 mRNA 81667 Prediction 0.1828 Gnb2 RAID03955691 rno-miR-742-3p miRNA MIMAT0005333 Gnb2 mRNA 81667 Prediction 0.1828