DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000591 rno-miR-343 303882 Tnk2 agaccCGUGUGCCUCCCUCu | ::::|||||||| gccccGGGUGUGGAGGGAGa 2 16 634 653 [rn4:11:69927661-69927680:-] 0.6312 151 7 -26.33 -0.1321 MIMAT0004712 rno-miR-23a* 303882 Tnk2 uuuaGGGUAGGGGUCCUUGGGg ||| |:|| :||||||| aggcCCCUUUCCAGGGAACCCc 2 19 458 479 [rn4:11:69927835-69927856:-] 0.6312 166 7 -32.12 -0.2905 MIMAT0004731 rno-miR-125b* 303882 Tnk2 uccagGGUUCUCGGACUGAACa ||| :||:||||||| ggaagCCA--GGCUUGACUUGg 2 18 374 393 [rn4:11:69927921-69927940:-] 0.6312 154 7 -20.73 -0.3555 MIMAT0005326 rno-miR-671 303882 Tnk2 ccACCUCGG-GACUCUUG-GCCu ||| :| ||| |||| ||| ugUGGCUUCACUGUGAACUCGGg 2 20 514 536 [rn4:11:69927778-69927800:-] 0.6312 122 0 -24.36 -0.3708 MIMAT0005329 rno-miR-674-5p 303882 Tnk2 auGUGG---UGAGGGUAGAGUCACg |||| ::|| ||||||| caCACCUUGGUUCAGCCCUCAGUGc 2 21 197 221 [rn4:11:69928093-69928117:-] 0.6312 143 7 -26.00 -0.1736 MIMAT0012824 rno-miR-513 303882 Tnk2 uaCUUUCUGUG-GAAGAACACUu |:||| : | ||||||| ugGGAAGUUCCAAGCCUUGUGAa 2 21 235 257 [rn4:11:69928057-69928079:-] 0.6312 143 7 -18.07 -0.3113 MIMAT0000560 rno-miR-326 303882 Tnk2 ugaccuccuucccGGGUCUCc :|||||| gauaucugcuucuUCCAGAGa 2 9 758 778 [rn4:11:69927536-69927556:-] 0.6312 124 6 -11.77 -0.1212 MIMAT0000564 rno-miR-328 303882 Tnk2 ugccuucccGUC-UCUCC-CGGUc ||| ||||| |||| gcucagaaaCAGAAGAGGCGCCAg 2 14 580 603 [rn4:11:69927711-69927734:-] 0.6312 120 0 -23.70 -0.5291 MIMAT0004641 rno-miR-330 303882 Tnk2 cggauucuguguccGGGUCUCu :|||||| ggauaucugcuucuUCCAGAGa 2 9 757 778 [rn4:11:69927536-69927557:-] 0.6312 124 6 -17.85 -0.1200 MIMAT0000615 rno-miR-101b 303882 Tnk2 aaGUCGAUAGU-GUCAUG-ACAu |||| : || |||||| ||| ccCAGC-GGCACCAGUACUUGUc 2 20 655 676 [rn4:11:69927638-69927659:-] 0.6312 124 0 -18.48 -0.2058 MIMAT0000792 rno-miR-23a 303882 Tnk2 ccUUUAGGGACCG--UUACACUa :|:| :: | | ||||||| ugGAGUGUUGGACAGAAUGUGAc 2 20 490 512 [rn4:11:69927802-69927824:-] 0.6312 142 7 -15.76 -0.2283 MIMAT0000793 rno-miR-23b 303882 Tnk2 ccaUUAGGGACCG--UUACACUa |:| :: | | ||||||| uggAGUGUUGGACAGAAUGUGAc 2 19 490 512 [rn4:11:69927802-69927824:-] 0.6312 141 7 -13.47 -0.2283 MIMAT0000798 rno-miR-27b 303882 Tnk2 cguCUUGA-AUCG--GUGACACUu || || |:|| |||||||| uguGACCUGUGGCUUCACUGUGAa 2 19 507 530 [rn4:11:69927784-69927807:-] 0.6312 156 7 -18.18 -0.6551 MIMAT0000799 rno-miR-27a 303882 Tnk2 cgcCUUGA-AUCG--GUGACACUu || || |:|| |||||||| uguGACCUGUGGCUUCACUGUGAa 2 19 507 530 [rn4:11:69927784-69927807:-] 0.6312 156 7 -19.29 -0.6551 MIMAT0000800 rno-miR-28 303882 Tnk2 gaguuaUCUGACACUCGA-GGAa |||| | |||| ||| aaggcaAGACAGGAAGCUGCCUg 2 17 256 278 [rn4:11:69928036-69928058:-] 0.6312 120 0 -13.34 -0.1455 MIMAT0000834 rno-miR-128 303882 Tnk2 uuuCUCUGG---CC-AAGUGACACu | |||| || ||||||||| aauGUGACCUGUGGCUUCACUGUGa 2 19 505 529 [rn4:11:69927785-69927809:-] 0.6312 156 7 -23.21 -0.8460 MIMAT0000844 rno-miR-138 303882 Tnk2 gccGGACUAAGUGUUGU-GGUCGa ||| : |||| || ||||| ccaCCUCGCUCAC-CCACCCAGCg 2 21 166 188 [rn4:11:69928126-69928148:-] 0.6312 122 0 -17.66 -0.1007 MIMAT0001626 rno-miR-431 303882 Tnk2 acguacugccggaCGUUCUGu ||||||| aagccuugugaagGCAAGACa 2 9 246 266 [rn4:11:69928048-69928068:-] 0.6312 140 7 -15.90 -0.2239 MIMAT0003122 rno-miR-370 303882 Tnk2 uugGUCCAAGGUGGG---GUCGUCCg || || |||| ||||||| ggaCA-GUGAGACCCAGGCAGCAGGa 2 21 121 145 [rn4:11:69928169-69928193:-] 0.6312 145 7 -22.24 -0.1239 MIMAT0003193 rno-miR-494 303882 Tnk2 uccaaagggcacauACAAAGu |||||| agagaaauaaagucUGUUUCu 2 8 774 794 [rn4:11:69927520-69927540:-] 0.6312 120 6 -6.98 -0.1681 MIMAT0005300 rno-miR-182 303882 Tnk2 gccacacucaaGAUGGUAACGGUUu || |::||||||| guucccaucgcCU-CUGUUGCCAAa 2 15 716 739 [rn4:11:69927575-69927598:-] 0.6312 148 7 -13.87 -0.3874 MIMAT0005331 rno-miR-708 303882 Tnk2 gggUCGAUCUAACAUUCGA-GGAa :|| ||| | ||||| ||| gaaGGCAAGACAGGAAGCUGCCUg 2 21 255 278 [rn4:11:69928036-69928059:-] 0.6312 128 0 -14.05 -0.1484

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G053690 Tnk2 Rattus norvegicus 303882

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Tnk2 RAID00432817 rno-miR-27a-3p miRNA MIMAT0000799 Tnk2 mRNA 303882 Prediction 0.1828 Tnk2 RAID00455529 rno-miR-328a-3p miRNA MIMAT0000564 Tnk2 mRNA 303882 Prediction 0.1828 Tnk2 RAID00564603 rno-miR-708-5p miRNA MIMAT0005331 Tnk2 mRNA 303882 Prediction 0.1828 Tnk2 RAID01069647 rno-miR-23a-3p miRNA MIMAT0000792 Tnk2 mRNA 303882 Prediction 0.1828 Tnk2 RAID01404660 rno-miR-23b-3p miRNA MIMAT0000793 Tnk2 mRNA 303882 Prediction 0.1828 Tnk2 RAID01789836 rno-miR-27b-3p miRNA MIMAT0000798 Tnk2 mRNA 303882 Prediction 0.1828 Tnk2 RAID01826248 rno-miR-182 miRNA MIMAT0005300 Tnk2 mRNA 303882 Prediction 0.1828 Tnk2 RAID01971963 rno-miR-326-3p miRNA MIMAT0000560 Tnk2 mRNA 303882 Prediction 0.1828 Tnk2 RAID02011125 rno-miR-494-3p miRNA MIMAT0003193 Tnk2 mRNA 303882 Prediction 0.1828 Tnk2 RAID02233136 rno-miR-330-5p miRNA MIMAT0004641 Tnk2 mRNA 303882 Prediction 0.1828 Tnk2 RAID02627089 rno-miR-101b-3p miRNA MIMAT0000615 Tnk2 mRNA 303882 Prediction 0.1828 Tnk2 RAID02762122 rno-miR-128-3p miRNA MIMAT0000834 Tnk2 mRNA 303882 Prediction 0.1828 Tnk2 RAID02824439 rno-miR-370-3p miRNA MIMAT0003122 Tnk2 mRNA 303882 Prediction 0.1828 Tnk2 RAID02885435 rno-miR-9b-3p miRNA MIMAT0017836 Tnk2 mRNA 303882 Prediction 0.1828 Tnk2 RAID03039457 rno-miR-431 miRNA MIMAT0001626 Tnk2 mRNA 303882 Prediction 0.1828 Tnk2 RAID03140367 rno-miR-138-5p miRNA MIMAT0000844 Tnk2 mRNA 303882 Prediction 0.1828 Tnk2 RAID03780011 rno-miR-28-5p miRNA MIMAT0000800 Tnk2 mRNA 303882 Prediction 0.1828 Tnk2 RAID03981480 rno-miR-3562 miRNA MIMAT0017832 Tnk2 mRNA 303882 Prediction 0.1828