DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004654 rno-miR-344-5p 171136 Cblb ggaCCUUAGAUCGGUCCUCGG-ACu ||||| | |||||||| || gagGGAAU---G-CAGGAGCCAUGg 2 22 73 93 [rn4:11:49690821-49690841:-] 0.5101 123 0 -23.95 -0.2280 MIMAT0004718 rno-miR-29a* 171136 Cblb gacuugugguuuucUUUAGUCa ||||||| cuagccauacuuuuAAAUCAGg 2 9 193 214 [rn4:11:49690700-49690721:-] 0.5739 140 7 -9.59 -0.8547 MIMAT0004721 rno-miR-30b-3p 171136 Cblb cuGCAUUUGUAGGUGUA-GGGUc :||||:: | : ||| |||| gcUGUAAGUUUGUCCAUGCCCAc 2 21 374 396 [rn4:11:49690518-49690540:-] 0.5739 124 0 -16.16 -0.1761 MIMAT0004735 rno-miR-139-3p 171136 Cblb gagguuguccCGGCGCAGAGGu |: |||||||| gucuuuucauGUGGCGUCUCCa 2 13 95 116 [rn4:11:49690798-49690819:-] 0.5101 148 7 -22.54 -0.2512 MIMAT0005280 rno-miR-743b 171136 Cblb agauaagucaUACCACAGAAAg ||||||||||| ugcaggagccAUGGUGUCUUUu 2 13 80 101 [rn4:11:49690813-49690834:-] 0.5101 160 7 -20.52 -0.1243 MIMAT0005290 rno-miR-883 171136 Cblb uaUGACUCUCUACAACGUCAAu ::||: ||| |||||||| acGUUGGCAGA-AUUGCAGUUu 2 21 291 311 [rn4:11:49690603-49690623:-] 0.5739 158 7 -15.82 -0.7946 MIMAT0005317 rno-miR-463 171136 Cblb gauGGGUUUAACCGCAGAUAGu ::|: :||| :||||||| cucUUCGUGUUGCUGUCUAUCc 2 20 426 447 [rn4:11:49690467-49690488:-] 0.5739 159 7 -18.75 -0.3075 MIMAT0005328 rno-miR-673 171136 Cblb gagguuccuggccucGACACUc |||||| ccuugaacuuugaauCUGUGAa 2 8 252 273 [rn4:11:49690641-49690662:-] 0.5739 120 6 -13.74 -0.1263 MIMAT0012830 rno-miR-504 171136 Cblb cugucucACGUCUGGUCCCAGa | :| |:||||||: ccauacuUUUAAAUCAGGGUUg 2 16 197 218 [rn4:11:49690696-49690717:-] 0.5739 135 0 -13.00 -0.1027 MIMAT0012846 rno-miR-201 171136 Cblb uucUUGUUACGGAAUGACUCa | ||: |:: |||||| uaaAUCAGGGUUGAACUGAGa 2 19 206 226 [rn4:11:49690688-49690708:-] 0.5739 122 6 -13.53 -0.1492 MIMAT0012853 rno-miR-761 171136 Cblb acACA-GUCAAAGUGGGACGACg ||| || |||||||||| uuUGUCCAUGCCCACCCUGCUGc 2 21 382 404 [rn4:11:49690510-49690532:-] 0.5739 159 7 -27.28 -0.1585 MIMAT0000608 rno-miR-351 171136 Cblb aguccgaguuucccgaggAGUCCCu |||||| gcuagccauacuuuuaaaUCAGGGu 2 8 192 216 [rn4:11:49690698-49690722:-] 0.5739 120 6 -14.61 -0.1130 MIMAT0000615 rno-miR-101b 171136 Cblb aagucgaUAGUGUCAUGACAu ||: | ||||||| guuuuugAUUCCUGUACUGUg 2 15 318 338 [rn4:11:49690576-49690596:-] 0.5739 150 7 -12.07 -0.5753 MIMAT0000781 rno-miR-9 171136 Cblb aguauGUC-GAUCUAU-UGGUUUCu ||| ||: | | ||||||| cagccCAGACUGCAAACACCAAAGg 2 19 1 25 [rn4:11:49690889-49690913:-] 0.6300 152 7 -15.13 -0.2218 MIMAT0000791 rno-miR-22 171136 Cblb ugucaagaaGU-UGACCGUCGAa || |:|||||||| ccugcugccCACAUUGGCAGCUa 2 14 397 419 [rn4:11:49690495-49690517:-] 0.5739 152 7 -17.97 -0.7577 MIMAT0000798 rno-miR-27b 171136 Cblb cguCUUGAAUCGGUGACACUu |||||| | |||||| cuuGAACUUUGAAUCUGUGAa 2 19 253 273 [rn4:11:49690641-49690661:-] 0.5739 134 6 -17.38 -0.1226 MIMAT0000799 rno-miR-27a 171136 Cblb cgcCUUGAAUCGGUGACACUu |||||| | |||||| cuuGAACUUUGAAUCUGUGAa 2 19 253 273 [rn4:11:49690641-49690661:-] 0.5739 134 6 -17.47 -0.1226 MIMAT0000804 rno-miR-30c 171136 Cblb cgacucucacauccuACAAAUGu ||||||| gugaaaugcuuuccuUGUUUACa 2 9 269 291 [rn4:11:49690623-49690645:-] 0.5739 140 7 -8.93 -0.9596 MIMAT0000805 rno-miR-30e 171136 Cblb gaaggucaguuccuACAAAUGu ||||||| ugaaaugcuuuccuUGUUUACa 2 9 270 291 [rn4:11:49690623-49690644:-] 0.5739 140 7 -11.25 -0.9658 MIMAT0000806 rno-miR-30b-5p 171136 Cblb ucgacucacauccuACAAAUGu ||||||| ugaaaugcuuuccuUGUUUACa 2 9 270 291 [rn4:11:49690623-49690644:-] 0.5739 140 7 -7.95 -0.9596 MIMAT0000807 rno-miR-30d 171136 Cblb gaaggucagccccuACAAAUGu ||||||| ugaaaugcuuuccuUGUUUACa 2 9 270 291 [rn4:11:49690623-49690644:-] 0.5739 140 7 -11.25 -0.9658 MIMAT0000808 rno-miR-30a 171136 Cblb gaaggucagcuccuACAAAUGu ||||||| ugaaaugcuuuccuUGUUUACa 2 9 270 291 [rn4:11:49690623-49690644:-] 0.5739 140 7 -11.25 -0.9658 MIMAT0000823 rno-miR-101a 171136 Cblb aagucAAUAGUGUCAUGACAu | ||: | ||||||| guuuuUGAUUCCUGUACUGUg 2 17 318 338 [rn4:11:49690576-49690596:-] 0.5739 152 7 -11.97 -0.5681 MIMAT0000829 rno-miR-125a-5p 171136 Cblb aguguccaauuucccagAGUCCCu |||||| cuagccauacuuuuaaaUCAGGGu 2 8 193 216 [rn4:11:49690698-49690721:-] 0.5739 120 6 -12.45 -0.1108 MIMAT0000830 rno-miR-125b-5p 171136 Cblb aguguucaaucccagAGUCCCu |||||| agccauacuuuuaaaUCAGGGu 2 8 195 216 [rn4:11:49690698-49690719:-] 0.5739 120 6 -12.35 -0.1097 MIMAT0000852 rno-miR-146a 171136 Cblb uuggGUACCUUAAGUC-AAGAGu | | ||:| ||| ||||| gcagCCUUGAGUCCAGCUUCUCu 2 19 121 143 [rn4:11:49690771-49690793:-] 0.5420 126 0 -16.80 -0.1996 MIMAT0000885 rno-miR-214 171136 Cblb gaCGGACAGACAC-----GGACGACa |::|||| || ||||||| aaGUUUGUCCAUGCCCACCCUGCUGc 2 20 379 404 [rn4:11:49690510-49690535:-] 0.5739 146 7 -21.23 -0.1540 MIMAT0000892 rno-miR-223 171136 Cblb ccccauaaaCUGUUUGACUgu | ::|||||| uaaaucaggGUUGAACUGAga 3 13 206 226 [rn4:11:49690688-49690708:-] 0.5739 124 0 -12.30 -0.1411 MIMAT0003176 rno-miR-539 171136 Cblb ugUGUGGUUCCUAUUAAAGAGg ||::| | | | ||||||| ccACGUCCA-GUUCAUUUCUCu 2 21 466 486 [rn4:11:49690428-49690448:-] 0.5739 154 7 -16.13 -0.4483 MIMAT0003379 rno-miR-378 171136 Cblb ggaaGACUGAGGUUCAGGUCa | | || ::||||||| aaggCAGCCU-UGAGUCCAGc 2 18 118 137 [rn4:11:49690777-49690796:-] 0.5420 147 7 -17.09 -0.1902 MIMAT0005309 rno-miR-384-5p 171136 Cblb ugUAACGGAUCCUUAACAAAUGu | |||:| |||||||| gaAAUGCUU--UCCUUGUUUACa 2 22 271 291 [rn4:11:49690623-49690643:-] 0.5739 146 7 -13.82 -0.9627 MIMAT0005339 rno-miR-873 171136 Cblb uccucuGA-GUG-UUCAAGGACg || :|| : ||||||| ugauucCUGUACUGUGUUCCUGa 2 16 323 345 [rn4:11:49690569-49690591:-] 0.5739 141 7 -15.92 -0.8332 MIMAT0005595 rno-miR-146b 171136 Cblb ugUCGGAUACCUUAAGUC-AAGAGu ||||| | ||:| ||| ||||| gcAGCCU-U-GAGUCCAGCUUCUCu 2 23 121 143 [rn4:11:49690771-49690793:-] 0.5420 134 0 -24.18 -0.1996

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G043824 Cblb Rattus norvegicus 171136

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Cblb RAID00109093 rno-miR-3593-3p miRNA MIMAT0017897 Cblb mRNA 171136 Prediction 0.1828 Cblb RAID00331268 rno-miR-214-3p miRNA MIMAT0000885 Cblb mRNA 171136 Prediction 0.1828 Cblb RAID00621811 rno-miR-101b-3p miRNA MIMAT0000615 Cblb mRNA 171136 Prediction 0.1828 Cblb RAID00782735 rno-miR-384-5p miRNA MIMAT0005309 Cblb mRNA 171136 Prediction 0.2381 Cblb RAID00802265 rno-miR-3084a-3p miRNA MIMAT0035740 Cblb mRNA 171136 Prediction 0.1828 Cblb RAID00814458 rno-miR-30e-5p miRNA MIMAT0000805 Cblb mRNA 171136 Prediction 0.2381 Cblb RAID00928758 rno-miR-30d-5p miRNA MIMAT0000807 Cblb mRNA 171136 Prediction 0.2381 Cblb RAID01045647 rno-miR-666-3p miRNA MIMAT0017371 Cblb mRNA 171136 Prediction 0.1828 Cblb RAID01192458 rno-miR-3590-3p miRNA MIMAT0017890 Cblb mRNA 171136 Prediction 0.1828 Cblb RAID01242627 rno-miR-652-5p miRNA MIMAT0017321 Cblb mRNA 171136 Prediction 0.1828 Cblb RAID01359573 rno-miR-29a-5p miRNA MIMAT0004718 Cblb mRNA 171136 Prediction 0.1828 Cblb RAID01395306 rno-miR-5132-5p miRNA MIMAT0035750 Cblb mRNA 171136 Prediction 0.1828 Cblb RAID01465232 rno-miR-873-5p miRNA MIMAT0005339 Cblb mRNA 171136 Prediction 0.2202 Cblb RAID01664816 rno-miR-30c-5p miRNA MIMAT0000804 Cblb mRNA 171136 Prediction 0.2381 Cblb RAID01679791 rno-miR-299a-3p miRNA MIMAT0017167 Cblb mRNA 171136 Prediction 0.1828 Cblb RAID01796978 rno-miR-146a-5p miRNA MIMAT0000852 Cblb mRNA 171136 Prediction 0.1828 Cblb RAID01799162 rno-miR-30b-5p miRNA MIMAT0000806 Cblb mRNA 171136 Prediction 0.2381 Cblb RAID01821850 rno-miR-134-3p miRNA MIMAT0017125 Cblb mRNA 171136 Prediction 0.1828 Cblb RAID01912908 rno-miR-30a-5p miRNA MIMAT0000808 Cblb mRNA 171136 Prediction 0.2381 Cblb RAID01944975 rno-miR-3084d miRNA MIMAT0035745 Cblb mRNA 171136 Prediction 0.1828 Cblb RAID01994565 rno-miR-299b-3p miRNA MIMAT0017834 Cblb mRNA 171136 Prediction 0.1828 Cblb RAID02303832 rno-miR-125b-5p miRNA MIMAT0000830 Cblb mRNA 171136 Prediction 0.1828 Cblb RAID02391721 rno-miR-378a-3p miRNA MIMAT0003379 Cblb mRNA 171136 Prediction 0.1828 Cblb RAID02488917 rno-miR-27a-3p miRNA MIMAT0000799 Cblb mRNA 171136 Prediction 0.2202 Cblb RAID02632755 rno-miR-9a-5p miRNA MIMAT0000781 Cblb mRNA 171136 Prediction 0.1828 Cblb RAID02640198 rno-miR-3084b-3p miRNA MIMAT0035742 Cblb mRNA 171136 Prediction 0.1828 Cblb RAID02767590 rno-miR-539-5p miRNA MIMAT0003176 Cblb mRNA 171136 Prediction 0.2202 Cblb RAID02785342 rno-miR-125a-5p miRNA MIMAT0000829 Cblb mRNA 171136 Prediction 0.1828 Cblb RAID03121451 rno-miR-22-3p miRNA MIMAT0000791 Cblb mRNA 171136 Prediction 0.2202 Cblb RAID03385940 rno-miR-223-3p miRNA MIMAT0000892 Cblb mRNA 171136 Prediction 0.1828 Cblb RAID03641207 rno-miR-351-5p miRNA MIMAT0000608 Cblb mRNA 171136 Prediction 0.1828 Cblb RAID03705996 rno-miR-217-3p miRNA MIMAT0017161 Cblb mRNA 171136 Prediction 0.1828 Cblb RAID03717988 rno-miR-146b-5p miRNA MIMAT0005595 Cblb mRNA 171136 Prediction 0.1828 Cblb RAID03750568 rno-miR-101a-3p miRNA MIMAT0000823 Cblb mRNA 171136 Prediction 0.1828 Cblb RAID03870510 rno-miR-27b-3p miRNA MIMAT0000798 Cblb mRNA 171136 Prediction 0.2202