DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000550 rno-miR-323 289034 Tmem183a ucuccagcuggcacAUUACAc |||||| auuuauaaacauuuUAAUGUa 2 8 176 196 [rn4:13:47303861-47303881:-] 0.6645 120 6 -3.34 -0.5224 MIMAT0000561 rno-miR-327 289034 Tmem183a ugggaGUACGGGGAGUUCc | | |:||||||| uuaaaCUUACUCCUCAAGg 2 15 318 336 [rn4:13:47303721-47303739:-] 0.6266 150 7 -21.53 -0.8113 MIMAT0000613 rno-miR-151 289034 Tmem183a ugaucUGACACU--CGAGGAGcu | ||| : ||||||| guuccAAUGUUGCUGCUCCUCaa 3 17 387 409 [rn4:13:47303648-47303670:-] 0.6266 127 0 -13.88 -0.1599 MIMAT0000614 rno-miR-151* 289034 Tmem183a ggaGUUCCU--CGGA-GUCAGAUc :::||| ||:| ||||||| cccUGGGGAUGGCUUCCAGUCUAg 2 19 15 38 [rn4:13:47304019-47304042:-] 0.6645 152 7 -26.33 -0.3061 MIMAT0004711 rno-miR-21* 289034 Tmem183a cugUCGGGU-AGCUGACGACAAc | |:|| |:|: ||||||| uaaACCUCAGUUGG-UGCUGUUg 2 20 242 263 [rn4:13:47303794-47303815:-] 0.6645 152 7 -20.43 -0.6088 MIMAT0003152 rno-miR-22* 289034 Tmem183a auUUCGAACGGUGA----CUUCUUGa || ||| |: || ||||||| uuAAACUUACUCCUCAAGGAAGAACa 2 21 318 343 [rn4:13:47303714-47303739:-] 0.6266 151 7 -14.76 -0.9678 MIMAT0004712 rno-miR-23a* 289034 Tmem183a uuuaggguaggggUCCUUGGGg |||||||| ccuuagggaucagAGGAACCCa 2 10 349 370 [rn4:13:47303687-47303708:-] 0.6266 145 7 -20.22 -0.9031 MIMAT0004723 rno-miR-34c* 289034 Tmem183a ggaccgacacaccAAUCACUAa |||||||| ccagucuaguccaUUAGUGAUc 2 10 30 51 [rn4:13:47304006-47304027:-] 0.6645 145 7 -9.84 -0.6167 MIMAT0004739 rno-miR-204* 289034 Tmem183a uugcAGGGAAA-CGGAAG-GGUCg ||||||| ||||| |||| cuuuUCCCUUUACCCUUCUCCAGa 2 19 429 452 [rn4:13:47303605-47303628:-] 0.6266 137 0 -25.02 -1.2286 MIMAT0000902 rno-miR-300-3p 289034 Tmem183a cuucucucgaacggGAACGUAu :|||||| auuuuaauguaaaaUUUGCAUa 2 9 186 207 [rn4:13:47303850-47303871:-] 0.6645 124 6 -10.12 -0.3926 MIMAT0003116 rno-miR-501 289034 Tmem183a aaagugggucccugUUUCCUaa |||||| aauuugcauauuugAAAGGAga 3 9 198 219 [rn4:13:47303838-47303859:-] 0.6645 120 0 -6.21 -0.1004 MIMAT0012827 rno-miR-1224 289034 Tmem183a gaGGUGGAGGGGUCAGGAGUg | |: |: |:: |||||| ucCAAUGUUGCUGCUCCUCAa 2 20 389 409 [rn4:13:47303648-47303668:-] 0.6266 123 6 -16.43 -0.1794 MIMAT0012832 rno-miR-568 289034 Tmem183a cacacAUAUGUAAAUAUGUa |||: ||||||| | ccaacUAUG-AUUUAUAAAc 2 16 167 185 [rn4:13:47303872-47303890:-] 0.6645 125 0 -5.21 -0.1568 MIMAT0001619 rno-miR-322 289034 Tmem183a agGUUUUGU--AC----UU--AACGACGAc :|||||| || || |||||||| cuUAAAACAGUUGUUCCAAUGUUGCUGCUc 2 21 375 404 [rn4:13:47303653-47303682:-] 0.6266 149 7 -16.44 -0.9914 MIMAT0000560 rno-miR-326 289034 Tmem183a ugacCUCCUUCCCGGGUCUCc |||||| ||||||| aucaGAGGAA---CCCAGAGg 2 18 357 374 [rn4:13:47303683-47303700:-] 0.6266 153 7 -26.05 -0.5836 MIMAT0000566 rno-miR-329 289034 Tmem183a uuUUUCCAAUCGACCCAC-ACAa ||| | ||:| |||| ||| uuAAACCUCAGUU-GGUGCUGUu 2 21 241 262 [rn4:13:47303795-47303816:-] 0.6645 122 0 -11.72 -0.8610 MIMAT0004641 rno-miR-330 289034 Tmem183a cgGAUUCU--GUGUCC--GGGUCUCu :||:|: || ||| ||||||| ccUUAGGGAUCAGAGGAACCCAGAGg 2 21 349 374 [rn4:13:47303683-47303708:-] 0.6266 154 7 -28.13 -0.6304 MIMAT0000573 rno-miR-140 289034 Tmem183a gaUGGUAUCCCAUUUUGG-UGAc |:|| || | |||||| ||| gaAUCA-AGAGGAAAACCAACUa 2 21 152 173 [rn4:13:47303884-47303905:-] 0.6645 130 0 -14.76 -1.2819 MIMAT0000583 rno-miR-339-5p 289034 Tmem183a gcacucgaggacCUCCUGUCCCu |: ||||||| agaaauaaagcaGGUGACAGGGu 2 12 450 472 [rn4:13:47303585-47303607:-] 0.6266 143 7 -17.30 -0.9650 MIMAT0004650 rno-miR-340-5p 289034 Tmem183a uuagucagaguaacgAAAUAUu |||||| gaaaaccaacuaugaUUUAUAa 2 8 162 183 [rn4:13:47303874-47303895:-] 0.6645 120 6 -5.50 -0.2585 MIMAT0000782 rno-miR-10a-5p 289034 Tmem183a guguUUAAGCCUAGAUGUCCCAu || | |:| ||||||| aaauAAAGCAGGU-GACAGGGUu 2 20 452 473 [rn4:13:47303584-47303605:-] 0.6266 145 7 -18.63 -0.5732 MIMAT0000784 rno-miR-15b 289034 Tmem183a acauuuGGUACUAC-ACGACGAu ||| ||| ||||||| guuguuCCA--AUGUUGCUGCUc 2 17 384 404 [rn4:13:47303653-47303673:-] 0.6266 148 7 -16.55 -0.9854 MIMAT0000785 rno-miR-16 289034 Tmem183a gcGGUUAUAAAUGCACGACGAu |||||:| ||||||| uuCCAAUGU-----UGCUGCUc 2 21 388 404 [rn4:13:47303653-47303669:-] 0.6266 146 7 -17.10 -0.9679 MIMAT0000788 rno-miR-19b 289034 Tmem183a agUCAAA--ACGUACCUAAACGUGu | ||| ||:| |||||||: acAUUUUAAUGUA-AAAUUUGCAUa 2 22 184 207 [rn4:13:47303850-47303873:-] 0.6645 134 0 -11.94 -0.3254 MIMAT0000789 rno-miR-19a 289034 Tmem183a agUCAAA--ACGUAUCUAAACGUGu | ||| ||:| | |||||||: acAUUUUAAUGUA-AAAUUUGCAUa 2 22 184 207 [rn4:13:47303850-47303873:-] 0.6645 142 0 -11.94 -0.3254 MIMAT0000791 rno-miR-22 289034 Tmem183a ugucaAGAAGUUGACCGUCGAa |:| |: ||||||| uucugUUUGGAGGGGGCAGCUg 2 18 55 76 [rn4:13:47303981-47304002:-] 0.6645 145 7 -16.64 -0.1792 MIMAT0000800 rno-miR-28 289034 Tmem183a gaguuaucugacacuCGAGGAa |||||| uguuccaauguugcuGCUCCUc 2 8 386 407 [rn4:13:47303650-47303671:-] 0.6266 120 6 -14.58 -0.1199 MIMAT0000801 rno-miR-29b 289034 Tmem183a uugugacuaaAGUUUACCACGAu |||: ||||||| guguuaaaccUCAGUUGGUGCUg 2 14 238 260 [rn4:13:47303797-47303819:-] 0.6645 153 7 -16.53 -0.7675 MIMAT0000802 rno-miR-29a 289034 Tmem183a auuggcuaaAGUCUACCACGAu |||| ||||||| uguuaaaccUCAGUUGGUGCUg 2 14 239 260 [rn4:13:47303797-47303818:-] 0.6645 157 7 -21.84 -0.7675 MIMAT0000803 rno-miR-29c 289034 Tmem183a auuggcuaaAGUUUACCACGAu |||: ||||||| uguuaaaccUCAGUUGGUGCUg 2 14 239 260 [rn4:13:47303797-47303818:-] 0.6645 153 7 -20.18 -0.7675 MIMAT0000857 rno-miR-181c 289034 Tmem183a ugAGUGGCUGUCCAACUUACAa |:|: ||| || ||||| auUUAUAAACA-UUUUAAUGUa 2 21 176 196 [rn4:13:47303861-47303881:-] 0.6645 122 0 -6.57 -0.1406 MIMAT0000863 rno-miR-186 289034 Tmem183a ucggguuuuccucuUAAGAAAc ||||||| uugaguuuguuuuuAUUCUUUu 2 9 261 282 [rn4:13:47303775-47303796:-] 0.6645 140 7 -5.60 -1.1907 MIMAT0000870 rno-miR-195 289034 Tmem183a cgGUUAUAAAG---AC-ACGACGAu ||:| ||| || ||||||| aaCAGUUGUUCCAAUGUUGCUGCUc 2 20 380 404 [rn4:13:47303653-47303677:-] 0.6266 149 7 -17.10 -0.9914 MIMAT0000876 rno-miR-203 289034 Tmem183a gaucACCAGG-AUUUGUAAAGUg || |:: |||||||||:| acuaUGAUUUAUAAACAUUUUAa 2 19 170 192 [rn4:13:47303865-47303887:-] 0.6645 149 0 -13.03 -0.2554 MIMAT0003196 rno-miR-376b-3p 289034 Tmem183a uucaccuacaaggaGAUACUa |||||| aagaggaaaaccaaCUAUGAu 2 8 157 177 [rn4:13:47303880-47303900:-] 0.6645 120 6 -13.11 -0.2331 MIMAT0003213 rno-miR-503 289034 Tmem183a gacGUCAUGACAAGG-----GCGACGAu |||| |||||| :|||||| aaaCAGU--UGUUCCAAUGUUGCUGCUc 2 21 379 404 [rn4:13:47303653-47303678:-] 0.6266 136 6 -23.90 -0.1030 MIMAT0003383 rno-miR-497 289034 Tmem183a auguuuGGUGUCACACGACGAc ||| || ||||||| guuguuCCAAUGU-UGCUGCUc 2 17 384 404 [rn4:13:47303653-47303673:-] 0.6266 150 7 -14.73 -0.9648 MIMAT0005320 rno-miR-495 289034 Tmem183a uucuUCACG-UGGUACAAACAAa :|||| :::: ||||||| aguuGGUGCUGUUGAGUUUGUUu 2 19 250 272 [rn4:13:47303785-47303807:-] 0.6645 153 7 -14.58 -1.1545 MIMAT0005331 rno-miR-708 289034 Tmem183a gggucgaucuaacauuCGAGGAa |||||| uuguuccaauguugcuGCUCCUc 2 8 385 407 [rn4:13:47303650-47303672:-] 0.6266 120 6 -14.51 -0.1175 MIMAT0005339 rno-miR-873 289034 Tmem183a uccUCUGA-GUGUUCAAGGACg ||:|| : :::||||||| cacAGGCUGUUUGGGUUCCUGg 2 19 100 121 [rn4:13:47303936-47303957:-] 0.6645 153 7 -19.30 -0.1576

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G101406 Tmem183a Rattus norvegicus 289034

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Tmem183a; Tmem183 rno-let-7a 320 335 UUGAUAUGUUGGAUGAUGGAGU- |||:|||| ||||| -------AAACUUACU-CCUCAA Tmem183a; Tmem183 rno-let-7c 320 335 UUGGUAUGUUGGAUGAUGGAGU- |||:|||| ||||| -------AAACUUACU-CCUCAA Tmem183a; Tmem183 rno-let-7d* 62 88 -UCU-UUCCGUCGUCC-AGCAUAUC- :|| ::|||||| || ||||:||| UGGAGGGGGCAGCUGGAUCGUGUAGC Tmem183a; Tmem183 rno-miR-101a 247 263 GAAGUCAAUAGUGUCAUGACAU |||||| :||:|||| -CUCAGUU-----GGUGCUGUU Tmem183a; Tmem183 rno-miR-107 370 402 ACUAUCGG--------GACAU-GUUACGACGA- || :||: :||| |||||:|||| AGA-GGCUUAAAACAGUUGUUCCAAUGUUGCUG Tmem183a; Tmem183 rno-miR-127 98 119 UCG-GUUCGAGUCUGCCUAGGCU || ||:||| :||:|:| UGCACAGGCUGUU-UGGGUUCC- Tmem183a; Tmem183 rno-miR-128a 211 242 -UUUUCUCU---GGCCA-AGU----GACACU |||:|||| |||| ||| ||||| GAAAGGAGAAACCCGGCCUCAUUUCCUGUGU Tmem183a; Tmem183 rno-miR-128b 212 242 CUUUCUCU---GGCCA-AGU----GACACU ||:|||| |||| ||| ||||| AAAGGAGAAACCCGGCCUCAUUUCCUGUGU Tmem183a; Tmem183 rno-miR-129* 104 127 UACGAAAAACCCCAU--UCCCGAA ||| |||||| :||||| -GGCUGUUUGGGUUCCUGGGGCUC Tmem183a; Tmem183 rno-miR-132 76 112 GCUGGUAC--CGACA------------UCUGACAAU ||:|:|| |||| ||:||||| GGAUCGUGUAGCUGAUUAGCGAUGCACAGGCUGUUU Tmem183a; Tmem183 rno-miR-133b 56 73 AUCGACCAACUUCCCCUGGUU ||| |||:|||||:| --UCUGUUUGGAGGGGGCA-- Tmem183a; Tmem183 rno-miR-134 13 37 -GGGAGACCA-----GUUGGUCAGUGU :|| |||| | |||||| AUCC-CUGGGGAUGGCUUCCAGUCU-- Tmem183a; Tmem183 rno-miR-136 276 299 -AGGUAGUAGUUUUGUUUACCUCA ||: |:||| ::|||||||| UUCUUUUAUCUCGGCAAAUGGAU- Tmem183a; Tmem183 rno-miR-140* 106 146 -ACAGGCACCAAGA----UGGG-------------ACACCAU ||| | ||||| :|:| ||||| CUGUUUG-GGUUCCUGGGGCUCCUAUUACAGGAGGUGUGGA- Tmem183a; Tmem183 rno-miR-151 15 41 -GGAGUUCCU--CGGAG-UCAGAUCA- ||| ::||| ||:|| |||||||| CCCU-GGGGAUGGCUUCCAGUCUAGUC Tmem183a; Tmem183 rno-miR-151* 100 124 AUGAUCUGACA--CUCGAGGAGCU- || ||:|||| |:|:|||| |: CAC-AGGCUGUUUGGGUUCCUGGGG Tmem183a; Tmem183 rno-miR-15b 238 265 -AC-AUUUGGUACUA--CACGACGAU- || |||||| ||||||:|: GUGUUAAACCUCAGUUGGUGCUGUUGA Tmem183a; Tmem183 rno-miR-16 225 265 GCGGU--------UAUAA---------AUGCACGACGAU- ||| :|:|| | ||||||:|: GGCCUCAUUUCCUGUGUUAAACCUCAGUUGGUGCUGUUGA Tmem183a; Tmem183 rno-miR-195 389 405 CGGUUAUAAAGACACGACGAU |||||:| ||||||| UCCAAUGU-----UGCUGCUC Tmem183a; Tmem183 rno-miR-204 287 318 UCCGUAU-CCUACUGU-------UUCCCUU- |||| ||||||: |:||||| CGGCAAAUGGAUGAUCUUGUGUUAGGGGAAG Tmem183a; Tmem183 rno-miR-207 119 152 UUCCC----------UCCUCUCGGUCCUCUUCG- :||| ||||| |: |||||:|: UGGGGCUCCUAUUACAGGAG-GUGUGGAGAGGUU Tmem183a; Tmem183 rno-miR-210 70 106 AGUCGG----------CGACAG--UG-UGCGUGUC- ||||: |||| :| |:|||||| GCAGCUGGAUCGUGUAGCUGAUUAGCGAUGCACAGG Tmem183a; Tmem183 rno-miR-211 287 318 UCCGUUU-CCUACUGU-------UUCCCUU- |||||| ||||||: |:||||| CGGCAAAUGGAUGAUCUUGUGUUAGGGGAAG Tmem183a; Tmem183 rno-miR-22 50 77 UGUC-AAGA--AGUUGA--CCGUCGAA ||| |||| |::: ||||||| UCAGAUUCUGUUUGGAGGGGGCAGCUG Tmem183a; Tmem183 rno-miR-221 362 402 -CUUUGGGUC----------GUCU-----GUUACAUCGA- |:||||||| ||| |||||| ||| AGGAACCCAGAGGCUUAAAACAGUUGUUCCAAUGUUGCUG Tmem183a; Tmem183 rno-miR-222 51 90 CUCUGGGUCA-----------UCGGUCU---ACAUCGA- |||::| || |||::|| ||||||| CAGAUUCUGUUUGGAGGGGGCAGCUGGAUCGUGUAGCUG Tmem183a; Tmem183 rno-miR-28 94 130 GAGUUA----UCUGACA-----------CUCGAGGAA |:|| ||:|||| |:|||||| -GCGAUGCACAGGCUGUUUGGGUUCCUGGGGCUCCUA Tmem183a; Tmem183 rno-miR-296 100 130 -UGUCCU---AACUCCC---CCCCG-GGA- ||||| |||:| ||||| ||| CACAGGCUGUUUGGGUUCCUGGGGCUCCUA Tmem183a; Tmem183 rno-miR-29a 243 262 -UUGGCUAAAGUCUACCACGAU- |||| |||| |||||||: AAACC----UCAGUUGGUGCUGU Tmem183a; Tmem183 rno-miR-29b 235 262 UUGUGACUAA----AGUUUACCACGAU- | || |||: |||||||: -CCUGUGUUAAACCUCAGUUGGUGCUGU Tmem183a; Tmem183 rno-miR-29c 244 262 -UGGCUAAAGUUUACCACGAU- ||| |||: |||||||: AACC----UCAGUUGGUGCUGU Tmem183a; Tmem183 rno-miR-324-5p 5 27 -UGU--GGUUACGGGAUCCCCUACGC :| ||| |||| ||||||| UGCUUCCCAU--CCCU-GGGGAUGG- Tmem183a; Tmem183 rno-miR-327 327 358 UGGGAGU------------ACGGGGAGUUCC- :||||| || ||||:|:|| CUCCUCAAGGAAGAACAUUUG-CCCUUAGGGA Tmem183a; Tmem183 rno-miR-33 80 104 GUUACGUUGA-----UGUUACGUG- :||:|:|| :|:|||||| -CGUGUAGCUGAUUAGCGAUGCACA Tmem183a; Tmem183 rno-miR-331 102 126 AAGAUCCU----AUCC-GGGUCCCCG- ||| |:|| :|| ||||| ---CAGGCUGUUUGGGUUCCUGGGGCU Tmem183a; Tmem183 rno-miR-337 65 92 -UUUCCGU------AGUAUAUCCUCGACUU :::|||| ||:|:| |||||| AGGGGGCAGCUGGAUCGUGU---AGCUGAU Tmem183a; Tmem183 rno-miR-339 110 141 -ACUCGAGGACCUCC-------UGUCC-CU- ||:|:||||||:| ||||| |: UUGGGUUCCUGGGGCUCCUAUUACAGGAGGU Tmem183a; Tmem183 rno-miR-343 117 149 AGACCC--------GUGUGCCUCC----CUCU- ||||| :||| ||||| |||| CCUGGGGCUCCUAUUACA-GGAGGUGUGGAGAG Tmem183a; Tmem183 rno-miR-344 61 83 UGCCAG-UCCGAAACCGAUCUAGU- :|| :||| |||:||||: UUGGAGGGGGCA---GCUGGAUCGU Tmem183a; Tmem183 rno-miR-345 60 76 CGUGACCUGAUCCCCAGUCGU :|||| :|||| |||| --UUUGGA--GGGGG-CAGCU Tmem183a; Tmem183 rno-miR-347 353 385 ACCCG---CU----GGGUCUCCC-----UGU- ||| || |||||||| ||| AGGGAUCAGAGGAACCCAGAGGCUUAAAACAG Tmem183a; Tmem183 rno-miR-351 111 141 GUCCGAGUUUCCCGAGGA----GUCC-CU- :||:|| :|||||||| |||| |: UGGGUUCCUGGGGCUCCUAUUACAGGAGGU Tmem183a; Tmem183 rno-miR-370 103 142 -UUGG----UCCAAGG----UGGGG------UCGUCCG- ::|: :|||||| :|:|| || |||: AGGCUGUUUGGGUUCCUGGGGCUCCUAUUACAGGAGGUG Tmem183a; Tmem183 rno-miR-412 286 320 UGCCGAUCACCUG----------GUCCACUUCA- |||| ||||: :||| ||||| UCGGCAAAUGGAUGAUCUUGUGUUAGGGGAAGUU Tmem183a; Tmem183 rno-miR-422b 15 41 CGGAAG---ACUGAGGUUCAGGUCA- ||| ||:||:| ||||:||| CCCUGGGGAUGGCUUCCAGUCUAGUC Tmem183a; Tmem183 rno-miR-424 375 405 AGGUUUUGU--ACU------UAACGACGAC ::|||||| || :|||||||| CUUAAAACAGUUGUUCCAAUGUUGCUGCUC Tmem183a; Tmem183 rno-miR-483 100 146 -UGUUCU----GCCCU----CCCC-------------UCCUCACU |||:| :||| |||| ||| |||: CACAGGCUGUUUGGGUUCCUGGGGCUCCUAUUACAGGAGGUGUGGA Tmem183a; Tmem183 rno-miR-485 205 232 CUUAAGUAGUG---CC------GGUCGGAGA :||: || ||:||||| ----AUAUUUGAAAGGAGAAACCCGGCCUCA Tmem183a; Tmem183 rno-miR-497 241 265 AUGUUUGGUGUCA--CACGACGAC- :||||| |||| ||||||:|| -UUAAACCUCAGUUGGUGCUGUUGA Tmem183a; Tmem183 rno-miR-501 343 367 AAAGUGGG--UCCCU-GUUUCCUAA ||::||| ||||| ||:|||| AUUUGCCCUUAGGGAUCAGAGGAA- Tmem183a; Tmem183 rno-miR-503 381 403 -GUCAUGACAAGGG--CGACGAU- |||| |||||| |:||||: ACAGU--UGUUCCAAUGUUGCUGC Tmem183a; Tmem183 rno-miR-7 19 44 UUGUUUUAGUGA---UCAGA--AGGU- :::|| :|| ||||| |||| --GGGGAUGGCUUCCAGUCUAGUCCAU Tmem183a; Tmem183 rno-miR-7b 19 44 UUGUUUUAGUGU---UCAGA--AGGU- :::|| :| ||||| |||| --GGGGAUGGCUUCCAGUCUAGUCCAU Tmem183a; Tmem183 rno-miR-98 315 335 UUGUUAUGUUGAAUGAUGGAGU- |:| |||||||| ||||| --AAGUUAAACUUACU-CCUCAA Tmem183a; Tmem183 rno-let-7a 315 333 UUGAUAUGUUGGAUGAUGGAGU || | || |||:|||| ||||| AAGT-TA-AACTTACT-CCTCA Tmem183a; Tmem183 rno-let-7c 313 333 uugguaugUUGGAUGAUGGAGU |||:|||| ||||| ggaagttaAACTTACT-CCTCA Tmem183a; Tmem183 rno-let-7d* 63 86 uCU-UUCCGUCGUCC-AGCAUAUC || ::|||||| || ||||:||| gGAGGGGGCAGCTGGATCGTGTAG Tmem183a; Tmem183 rno-miR-101a 246 262 GAAGUCAAUAGUGUCAUGACAu | |||||| :||:|||| CCTCAGTT-----GGTGCTGTt Tmem183a; Tmem183 rno-miR-107 379 400 acUAUCGGGACAUGUUACGACGA | ||:: | | |||||:|||| aaACAGTTGT-TCCAATGTTGCT Tmem183a; Tmem183 rno-miR-10a 449 473 GUGUUUA---AGCCUAGAUGUCCCAu || |||| | |:| ||||||| CAGAAATAAAGCAGGT-GACAGGGTt Tmem183a; Tmem183 rno-miR-127 93 120 UCGGUUCGAGUCUG------CCUAGGcu ||| | || |||:| || ||| AGCGATGCACAGGCTGTTTGGGTTCCtg Tmem183a; Tmem183 rno-miR-128a 212 241 UUUUCUCU---GGCC------AAGUGACACu |||:|||| |||| ||| ||||| AAAGGAGAAACCCGGCCTCATTTC-CTGTGt Tmem183a; Tmem183 rno-miR-128b 211 241 CUUU-CUCU---GGCC------AAGUGACACu |||| |||| |||| ||| ||||| GAAAGGAGAAACCCGGCCTCATTTC-CTGTGt Tmem183a; Tmem183 rno-miR-129* 103 126 UACGAAAAACCCCA--UUCCCGAa | ||| |||||| | :||||| AGGCTGTTTGGGTTCCTGGGGCTc Tmem183a; Tmem183 rno-miR-132 88 111 gCUGGUACCGAC--AUCUGACAAu ||::| | || ||:||||| tGATTAGCGATGCACAGGCTGTTt Tmem183a; Tmem183 rno-miR-133a 50 74 uGUC---GACCAACUUCCCCUGguu ||| ||| |||:|||||:| tCAGATTCTGTTTGGAGGGGGCagc Tmem183a; Tmem183 rno-miR-133b 54 74 aucGACCAACUUCCCCUGguu ||| |||:|||||:| attCTGTTTGGAGGGGGCagc Tmem183a; Tmem183 rno-miR-134 15 38 GGGAGACC-A--GUUGGUCAGugu |||| || | | |||||| CCCTGGGGATGGCTTCCAGTCtag Tmem183a; Tmem183 rno-miR-136 277 299 AGGUAGUAGUUUUGUUUACCUca ||: |:||| ::|||||||| TCTTTTATCTCGGCAAATGGAtg Tmem183a; Tmem183 rno-miR-140* 107 125 ACAGGCACCAAGAUGGGACACCau |||::| |||| |||| || TGTTTG-GGTT----CCTGGGGct Tmem183a; Tmem183 rno-miR-15b 375 404 acAUUUGGU--AC-----UAC-ACGACGAu |||| || || ||| ||||||| ctTAAAACAGTTGTTCCAATGTTGCTGCTc Tmem183a; Tmem183 rno-miR-15b 239 263 AC-AUUUGG-UACUA-CACGACGAu || |||||| | | ||||||:| TGTTAAACCTCAGTTGGTGCTGTTg Tmem183a; Tmem183 rno-miR-16 388 404 gcGGUUAUAAAUGCACGACGAu |||||:| ||||||| ttCCAATGT-----TGCTGCTc Tmem183a; Tmem183 rno-miR-16 243 263 gcgguuaUAAAUGCACGACGAu | ||: ||||||:| aaacctcAGTTG-GTGCTGTTg Tmem183a; Tmem183 rno-miR-195 380 404 cgGUUAUAAAG---AC-ACGACGAu ||:| ||| || ||||||| aaCAGTTGTTCCAATGTTGCTGCTc Tmem183a; Tmem183 rno-miR-207 129 150 uucccUCCUCUCGGUCCUCUUCg ||||| |: |||||:| attacAGGAG-GTGTGGAGAGGt Tmem183a; Tmem183 rno-miR-210 79 104 AGU-CGGCGAC-AGU-G-UGCGUGUC ||: |: |||| |:| | |:|||||| TCGTGTAGCTGATTAGCGATGCACAG Tmem183a; Tmem183 rno-miR-22 50 76 uGUC-AAG--AAG--UUGACCGUCGAa ||| ||| ||: |: ||||||| tCAGATTCTGTTTGGAGGGGGCAGCTg Tmem183a; Tmem183 rno-miR-22* 319 343 uUUCGAACGGUGA----CUUCUUGa || ||| |: || ||||||| tAAACTTACTCCTCAAGGAAGAACa Tmem183a; Tmem183 rno-miR-22* 340 368 UUUCGAACGG-------U-GACUUCUUGa || :||||| | | ||:|||| AACATTTGCCCTTAGGGATCAGAGGAACc Tmem183a; Tmem183 rno-miR-221 363 400 CUUUGGGUC----------GUC-----UGUUACAUCGA |:||||||| ||| |||||| ||| GGAACCCAGAGGCTTAAAACAGTTGTTCCAATGTTGCT Tmem183a; Tmem183 rno-miR-222 64 88 CUCUGGGUCAUCGGUC---UACAUCGA |||: :| |||::| :||||||| GAGG--GGGCAGCTGGATCGTGTAGCT Tmem183a; Tmem183 rno-miR-28 109 129 gaguuaucuGACACUCGAGGAa ||| |:|||||| tttgggttcCTG-GGGCTCCTa Tmem183a; Tmem183 rno-miR-296 101 127 UGUCCUA-ACUCCC-----CCCCGGGa ||||| | | ||| |||||:| ACAGGCTGTTTGGGTTCCTGGGGCTCc Tmem183a; Tmem183 rno-miR-29a 244 260 UUGGCUAAAGUCUACCACGAu |||| |||| ||||||| AACC----TCAGTTGGTGCTg Tmem183a; Tmem183 rno-miR-29b 238 260 uugugacuaaAGUUUACCACGAu |||: ||||||| gtgttaaaccTCAGTTGGTGCTg Tmem183a; Tmem183 rno-miR-29c 245 260 UGGCUAAAGUUUACCACGAu ||| |||: ||||||| ACC----TCAGTTGGTGCTg Tmem183a; Tmem183 rno-miR-324-5p 7 27 uguGGUUACGGGAUCCCCUACgc || || |||| ||||||| cttCCCAT-CCCT-GGGGATGgc Tmem183a; Tmem183 rno-miR-326 357 374 ugacCUCCUUCCCGGGUCUCC |||||| |||||||| atcaGAGGAA---CCCAGAGG Tmem183a; Tmem183 rno-miR-327 318 336 ugggaGUACGGGGAGUUCC | | |:|||||||| ttaaaCTTACTCCTCAAGG Tmem183a; Tmem183 rno-miR-33 79 102 guuACGUUGA-----UGUUACGUG ||:|:|| :|:|||||| tcgTGTAGCTGATTAGCGATGCAC Tmem183a; Tmem183 rno-miR-331 104 124 aaGAUCCUAUCC-GGGUCCCCG || | |:|| :|| ||||| ggCT-GTTTGGGTTCCTGGGGC Tmem183a; Tmem183 rno-miR-337 66 91 uuuCCGUAG-UAUAUC-C-UCGACUu |||| | : || | | |||||| gggGGCAGCTGGATCGTGTAGCTGAt Tmem183a; Tmem183 rno-miR-339 453 472 acucgagGACCUCCUGUCCCu | || ||||||| aataaagCAGG-TGACAGGGt Tmem183a; Tmem183 rno-miR-339 111 138 ACUCGAGGACCUC-------CUGUCCcu ||:|:||||||:| ||||| TGGGTTCCTGGGGCTCCTATTACAGGag Tmem183a; Tmem183 rno-miR-344 64 81 ugCCAGUCCGAAACCGAUCUAGu || :||| |||:|||| gaGG--GGGC---AGCTGGATCg Tmem183a; Tmem183 rno-miR-345 58 75 cgugACCUGAUCCCCAGUCGu ||| ||||| |||| tgttTGG---AGGGGGCAGCt Tmem183a; Tmem183 rno-miR-347 352 368 ACCCGCUGGGUCUCCCUGu | || || :|||||| || TAGG-GA-TCAGAGGAACc Tmem183a; Tmem183 rno-miR-351 102 124 GUCCGAGUUUCCCGAGGAGUCCCu |||||| |||:|||| :||| CAGGCTGTTTGGGTTCCT-GGGGc Tmem183a; Tmem183 rno-miR-370 115 140 uuGG--UCCAAGG-UGGGGUCGUCCg || :|| ||| |:: ||| ||| ttCCTGGGGCTCCTATTACAGGAGGt Tmem183a; Tmem183 rno-miR-422b 18 39 cggaagACUGAGGUUCAGGUCA ||:||:| ||||:||| tggggaTGGCTTCCAGTCTAGT Tmem183a; Tmem183 rno-miR-424 375 404 aggUUUUGU--AC----UU--AACGACGAc |||||| || || |||||||| cttAAAACAGTTGTTCCAATGTTGCTGCTc Tmem183a; Tmem183 rno-miR-483 122 144 uguucugcccuccCCUCCUCACu ||||| ||| ggctcctattacaGGAGGTGTGg Tmem183a; Tmem183 rno-miR-485 210 231 cuuaaguagugccGGUCGGAGa ||:||||| tgaaaggagaaacCCGGCCTCa Tmem183a; Tmem183 rno-miR-497 240 263 augUUUGGUGUCA--CACGACGAC ||||| |||| ||||||:|| gttAAACCTCAGTTGGTGCTGTTG Tmem183a; Tmem183 rno-miR-501 343 367 aAAGUGGG--UCCCU-GUUUCCUaa ||::||| ||||| ||:|||| aTTTGCCCTTAGGGATCAGAGGAac Tmem183a; Tmem183 rno-miR-503 382 404 GUCAUGACAAGG-----GCGACGAu |||| |||||| :|||||| CAGT--TGTTCCAATGTTGCTGCTc Tmem183a; Tmem183 rno-miR-7 7 32 uuguuuUAGUGAU-----CAGAAGGU ||| ||: | |||||| cttcccATCCCTGGGGATGGCTTCCA Tmem183a; Tmem183 rno-miR-7b 7 32 uuguuuUAGUG-----UUCAGAAGGU ||| | | | |||||| cttcccATCCCTGGGGATGGCTTCCA Tmem183a; Tmem183 rno-miR-98 313 333 uugUUAUGUUGAAUGAUGGAGU |:| |||||||| ||||| ggaAGTTAAACTTACT-CCTCA Tmem183a; Tmem183 rno-miR-10a 466 473 G----------------------UGUUUAAGCCUAGAUGUCCCAU |:||| || ||||||| UUUCCCUUUACCCUUCUCCAGAAAUAAAGCAGGUG--ACAGGGUU Tmem183a; Tmem183 rno-miR-15b 397 404 ------------------------ACAUUUGGUACUAC-ACGACGAU ||| ||| ||| ||||||| AGGAACCCAGAGGCUUAAAACAGUUGUU--CCA--AUGUUGCUGCUC Tmem183a; Tmem183 rno-miR-16 397 404 GC--------------------------GGUUAUAAAUGCACGACGAU |||||:| ||||||| AGGAACCCAGAGGCUUAAAACAGUUGUUCCAAUGU-----UGCUGCUC Tmem183a; Tmem183 rno-miR-195 397 404 C---------------------------GGUUAUAAAGACACGACGAU |||||:| ||||||| AGGAACCCAGAGGCUUAAAACAGUUGUUCCAAUGU-----UGCUGCUC Tmem183a; Tmem183 rno-miR-22 69 76 U----------------GUC-AAGA--AGUUGA--CCGUCGAA ||| |||| | : ||||||| UCUAGUCCAUUAGUGAUCAGAUUCUGUUUGGAGGGGGCAGCUG Tmem183a; Tmem183 rno-miR-22* 336 343 UUUC----------------------GAACGGUGACUUCUUGA || :|| ||||||| UCUUGUGUUAGGGGAAGUUAAACUUACUCCUCAAGGAAGAACA Tmem183a; Tmem183 rno-miR-29a 253 260 --------------------------UUGGCUAAAGUCUACCACGAU |||| |||| |||||||: GAAACCCGGCCUCAUUUCCUGUGUUAAACC----UCAGUUGGUGCUGU Tmem183a; Tmem183 rno-miR-29b 253 260 UUGUGACUAA--------------------AGUUUACCACGAU |||: |||||||: GAAACCCGGCCUCAUUUCCUGUGUUAAACCUCAGUUGGUGCUGU Tmem183a; Tmem183 rno-miR-29c 253 260 ---------------------------UGGCUAAAGUUUACCACGAU ||| |||: |||||||: GAAACCCGGCCUCAUUUCCUGUGUUAAACC----UCAGUUGGUGCUGU Tmem183a; Tmem183 rno-miR-326 367 374 UGAC-------------------------CUCCUUCCCGGGUCUCC |||||| |||||||| CAAGGAAGAACAUUUGCCCUUAGGGAUCAGAGGAA---CCCAGAGGC Tmem183a; Tmem183 rno-miR-327 329 336 UG-----GGAGUAC-------------------GGGGAGUUCC :|| || |:|||||||| UGGAUGAUCUUGUGUUAGGGGAAGUUAAACUUACUCCUCAAGGA Tmem183a; Tmem183 rno-miR-339 465 472 ACUC------------GAGGA-----------CCUCCUGUCCCU |||| || ||||||| UUUUCCCUUUACCCUUCUCCAGAAAUAAAGCAGGU-GACAGGGU Tmem183a; Tmem183 rno-miR-424 397 404 ---------------------------AGGUUUUGUACUUAACGACGAC ||||| :|||||||| AGGAACCCAGAGGCUUAAAACAGUUGUUCCAAU------GUUGCUGCUC

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Tmem183a RAID00141182 rno-miR-33-3p miRNA MIMAT0017104 Tmem183a mRNA 289034 Prediction 0.1828 Tmem183a RAID00189008 rno-miR-708-5p miRNA MIMAT0005331 Tmem183a mRNA 289034 Prediction 0.1828 Tmem183a RAID00271415 rno-miR-185-3p miRNA MIMAT0017142 Tmem183a mRNA 289034 Prediction 0.1828 Tmem183a RAID00491740 rno-miR-186-5p miRNA MIMAT0000863 Tmem183a mRNA 289034 Prediction 0.2202 Tmem183a RAID00691178 rno-miR-361-3p miRNA MIMAT0017199 Tmem183a mRNA 289034 Prediction 0.1828 Tmem183a RAID00702032 rno-miR-22-3p miRNA MIMAT0000791 Tmem183a mRNA 289034 Prediction 0.1828 Tmem183a RAID00866935 rno-miR-15b-5p miRNA MIMAT0000784 Tmem183a mRNA 289034 Prediction 0.2202 Tmem183a RAID01016679 rno-miR-195-5p miRNA MIMAT0000870 Tmem183a mRNA 289034 Prediction 0.2202 Tmem183a RAID01081786 rno-miR-339-5p miRNA MIMAT0000583 Tmem183a mRNA 289034 Prediction 0.2202 Tmem183a RAID01099277 rno-miR-19a-3p miRNA MIMAT0000789 Tmem183a mRNA 289034 Prediction 0.1828 Tmem183a RAID01240027 rno-miR-497-5p miRNA MIMAT0003383 Tmem183a mRNA 289034 Prediction 0.2202 Tmem183a RAID01289614 rno-miR-326-3p miRNA MIMAT0000560 Tmem183a mRNA 289034 Prediction 0.1828 Tmem183a RAID01416322 rno-miR-29a-3p miRNA MIMAT0000802 Tmem183a mRNA 289034 Prediction 0.2381 Tmem183a RAID01540214 rno-miR-3586-5p miRNA MIMAT0017880 Tmem183a mRNA 289034 Prediction 0.1828 Tmem183a RAID01763533 rno-miR-873-5p miRNA MIMAT0005339 Tmem183a mRNA 289034 Prediction 0.1828 Tmem183a RAID01778676 rno-miR-207 miRNA MIMAT0003115 Tmem183a mRNA 289034 Prediction 0.1828 Tmem183a RAID01850284 rno-miR-203a-3p miRNA MIMAT0000876 Tmem183a mRNA 289034 Prediction 0.1828 Tmem183a RAID01941312 rno-miR-16-5p miRNA MIMAT0000785 Tmem183a mRNA 289034 Prediction 0.2202 Tmem183a RAID02048170 rno-miR-28-5p miRNA MIMAT0000800 Tmem183a mRNA 289034 Prediction 0.1828 Tmem183a RAID02249472 rno-miR-140-5p miRNA MIMAT0000573 Tmem183a mRNA 289034 Prediction 0.1828 Tmem183a RAID02319156 rno-miR-340-5p miRNA MIMAT0004650 Tmem183a mRNA 289034 Prediction 0.1828 Tmem183a RAID02354471 rno-miR-503-5p miRNA MIMAT0003213 Tmem183a mRNA 289034 Prediction 0.1828 Tmem183a RAID02409614 rno-miR-23b-5p miRNA MIMAT0017099 Tmem183a mRNA 289034 Prediction 0.1828 Tmem183a RAID02522096 rno-miR-322-5p miRNA MIMAT0001619 Tmem183a mRNA 289034 Prediction 0.2202 Tmem183a RAID02580211 rno-miR-330-5p miRNA MIMAT0004641 Tmem183a mRNA 289034 Prediction 0.1828 Tmem183a RAID02774663 rno-miR-181c-5p miRNA MIMAT0000857 Tmem183a mRNA 289034 Prediction 0.1828 Tmem183a RAID02886516 rno-miR-29c-3p miRNA MIMAT0000803 Tmem183a mRNA 289034 Prediction 0.2381 Tmem183a RAID02913787 rno-miR-10a-5p miRNA MIMAT0000782 Tmem183a mRNA 289034 Prediction 0.2202 Tmem183a RAID02913805 rno-miR-376b-3p miRNA MIMAT0003196 Tmem183a mRNA 289034 Prediction 0.1828 Tmem183a RAID02989742 rno-miR-329-3p miRNA MIMAT0000566 Tmem183a mRNA 289034 Prediction 0.1828 Tmem183a RAID03108625 rno-miR-3065-3p miRNA MIMAT0017840 Tmem183a mRNA 289034 Prediction 0.1828 Tmem183a RAID03305004 rno-miR-19b-3p miRNA MIMAT0000788 Tmem183a mRNA 289034 Prediction 0.1828 Tmem183a RAID03398976 rno-miR-495 miRNA MIMAT0005320 Tmem183a mRNA 289034 Prediction 0.1828 Tmem183a RAID03441823 rno-miR-3557-3p miRNA MIMAT0017820 Tmem183a mRNA 289034 Prediction 0.1828 Tmem183a RAID03655785 rno-miR-29b-3p miRNA MIMAT0000801 Tmem183a mRNA 289034 Prediction 0.2381 Tmem183a RAID04008280 rno-miR-15a-5p miRNA MIMAT0035728 Tmem183a mRNA 289034 Prediction 0.1828