DNA & RNA Element - miRNAMap |
Gene Name | Mature miRNA | Target Start | Target End | miRNA 3-5 | Alignment | Target 5-3 |
Ubxn4; Ubxd2; Ubxdc1 | rno-let-7a | 590 | 611 | UUGAUAUGUUGGA----UGAUGGAGU | |||||: |||:|||: | -----AACAACUGACUGACUGCCUUU |
Ubxn4; Ubxd2; Ubxdc1 | rno-let-7i | 583 | 611 | UGUCGUGU------UUGA-UGAUGGAGU | ||||| :||| |||:|||: | UCAGCAAAACAACUGACUGACUGCCUUU |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-101a | 510 | 534 | -GAAGU-CAAUAGUGUCAUGACAU- | |||: |||:| |||| :||||| | UCUUUUUGUUGU-ACAGGGCUGUAC |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-101b | 510 | 534 | -GAAGU-CGAUAGUGUCAUGACAU- | |||: |:|:| |||| :||||| | UCUUUUUGUUGU-ACAGGGCUGUAC |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-10a | 149 | 195 | -GUGUUUAA---GCCU-------------AGA-----UGUCCCAU | ||::|| :||| ||| |:|||||| | ACAUGAAGUAGCUGGAUGCUAGGUCCUUGUCUAAUCAAUAGGGUAA |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-10b | 506 | 529 | -UGUGUUUAAGCCAAGAUGUCCC- | :||: ||: ||| ||||||| | AGCAUCU-UUUUGUUGUACAGGGC |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-128a | 320 | 341 | UUUUCUCUGGCCA---AGUGACACU | || |::||| |||||| | --CAGUAAUUGGUAUGUCACUGA-- |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-128b | 320 | 341 | CUUUCUCUGGCCA---AGUGACACU | || |::||| |||||| | --CAGUAAUUGGUAUGUCACUGA-- |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-129* | 510 | 531 | UACGAAAAACCCCAU-UCCCGAA | ||||||| ||| |||||| | --UCUUUUUGUUGUACAGGGCUG |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-130a | 377 | 413 | -UACG---GGA---AAAUUGUA-------ACGUGAC | :|| |: ||||:|:| |||||| | GGUGAUAACUGAUGUUUAGCGUUUCUCUUUGCACUC |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-134 | 25 | 49 | -GGGAGA-CC-AGUUG-GUCAGUGU | :|||:| || || || ||| ||| | UUCCUUUAGGAUCCACUCAG-CACU |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-140 | 181 | 205 | GAUGG-UAUCCCAUU--UUGGUGA- | |:| ||||||||| |:|::|| | -AAUCAAUAGGGUAACCAGCUGCUC |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-192 | 525 | 543 | -CCGACAGUUAAGUAUCCAGUC | |||||| | |||||| | GGGCUGUA----CCGAGGUCAC |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-196a | 582 | 610 | -GGUUGU--UGU--ACU--UUGAUGGAU | :||:|| ||| ||| :|||:||| | GUCAGCAAAACAACUGACUGACUGCCUU |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-196b | 589 | 610 | GGUUGUUGUCCU-UUGAUGGAU | |||||| | :|||:||| | -AAACAACUGACUGACUGCCUU |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-19a | 389 | 412 | AGUCAAAACGUAUCU--AAACGUGU | |||| ||:| ||||||| | --UGUUUAGCGUUUCUCUUUGCACU |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-19b | 389 | 412 | AGUCAAAACGUACCU--AAACGUGU | |||| ||:| ||||||| | --UGUUUAGCGUUUCUCUUUGCACU |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-20b | 344 | 364 | UGGACGUGAUACUCGUGAAAC | :||| :| |||||||| | GUCUGAGCCCCGAGCACUUA- |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-214 | 568 | 603 | -GAC-GGAC--AGACA--CG-------GAC-GACA | ||| |||| ||||| || ||| ||| | GCUGCCCUGAUUCUGUCAGCAAAACAACUGACUGA |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-222 | 145 | 172 | CUCUGGG---UCAUCGGUCUAC-AUCGA | ||| | ||||||::|||| ||| | CAGAACAUGAAGUAGCUGGAUGCUAGG- |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-292-3p | 43 | 72 | -UGUGAGUUU-UGGAC----CGCCGUGAA | :||||: :|: |:|| || | AGCACUUUUCUGCUGGGGAAGUGGGUCUG |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-298 | 251 | 274 | CCUUCU----UGUCGGGAGGAGACGG- | ||| |||||||||: ||| | --CAGACUUCACAGCCCUCUA--GCCC |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-29c* | 42 | 71 | CUUGUGGU-------CCUCUUUAGCCAGU | |:|||: ||:|||:| |||| | CAGCACUUUUCUGCUGGGGAAGUGGGUCU |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-30b | 53 | 86 | UCGACUCA--CAUCC--------UACAAAUGU- | ||||:| ||:|| |||||| || | UGCUGGGGAAGUGGGUCUGCUCUAUGUUUCCAG |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-30c | 53 | 86 | -CGACUCUCACAUCC--------UACAAAUGU- | ||||:|: ||:|| |||||| || | UGCUGGGGAAGUGGGUCUGCUCUAUGUUUCCAG |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-31 | 156 | 182 | -GUCGA--UACGGUCGUAGAACGGA- | :|||| ||||:|| ||||:|| | GUAGCUGGAUGCUAGGUCCUUGUCUA |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-320 | 261 | 278 | AAGCGGGAGAGUUGGGUCGAAAA | ||||||| |:|||||| | --AGCCCUCU-AGCCCAGCG--- |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-324-3p | 40 | 68 | -GGUCGUC----GUGGACCCCGUCACC- | :||||| | |||||| ||||| | CUCAGCACUUUUCUGCUGGGGAAGUGGG |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-324-5p | 43 | 67 | -UGUGGUU--ACGGGAUCCCCUACGC- | :|||: |||: ||||| |:| | AGCACUUUUCUGCU---GGGGAAGUGG |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-325 | 22 | 61 | UGUGAA------------UGACUCGUG----GAUGAUCC- | :||| ||| ||||| ||:||:|| | -UGCUUCCUUUAGGAUCCACUCAGCACUUUUCUGCUGGGG |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-327 | 261 | 290 | -UGGGAGUACGGGG-----AGU---UCC- | :||||| |||| ||| ||| | AGCCCUCUAGCCCAGCGUUUCAUUUAGGA |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-337 | 139 | 166 | -UUUCCGUA--GUAUAUCCUCGACUU- | |||| || |||: || |||||:| | AAAAGUCAGAACAUGAAGUAGCUGGAU |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-345 | 53 | 74 | CGUGACCUGAUC-CCCAGUCGU | :||||: || ||||| || | -UGCUGGGGAAGUGGGUCUGCU |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-349 | 516 | 532 | UCUCCAAUUCUGUCGUCCCGAC- | |||: |||||||| | ---UGUUGUA----CAGGGCUGU |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-34a | 191 | 230 | UUGUUGGUCGAU-----------UCUG------UGACGGU | :||||||||: ||| :||||| | -GUAACCAGCUGCUCAGCCUAAAAGAAGCCAAGGCUGCCC |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-34b | 581 | 610 | GUUAGUCGAUUAA-----UG--UGACGGAU | :||||| || ||||||| | -UGUCAGCAAAACAACUGACUGACUGCCUU |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-34c | 581 | 610 | CGUUAGUCG--------AUUGAUGUGACGGA- | :||||| |:|||: ||||||| | --UGUCAGCAAAACAACUGACUG-ACUGCCUU |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-351 | 167 | 208 | -GUCCG----------AGUU-UCCCG-------AGGAGUCCCU | :|||: |||| ||||: | ||||| | CUAGGUCCUUGUCUAAUCAAUAGGGUAACCAGCUGCUCAGC-- |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-352 | 190 | 206 | AUGAUACGUUGGAUGAUGAGA | |:|||| :||:||| | -----GGUAACCAGCUGCUCA |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-363-5p | 21 | 44 | UUUAACGUAGCA----CUAGGUGGGC | ||| || |||||||:| | ---CUGCUUCCUUUAGGAUCCACUCA |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-376b | 61 | 80 | -UCACCUACAAGGAGAUACUA | |||||:| | ||||||| | AAGUGGGUC-UGCUCUAUGU- |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-376c | 62 | 82 | GCACUUUAAAGGAGAUACAA- | |||:: | ||||||||| | AGUGGGUC-UGCUCUAUGUUU |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-381 | 161 | 183 | CUCU-CGAA-CGGGAACAUAU- | :|| ||| |:|||||| || | UGGAUGCUAGGUCCUUGUCUAA |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-409-5p | 168 | 198 | GUUUCA---AC-GAG-------CCCAUUGGA | |:|| || || |||||||| | -UAGGUCCUUGUCUAAUCAAUAGGGUAACCA |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-412 | 364 | 383 | -UGC-CGAUCACCUGGUCCACUUCA | :|| |||| |:||||||| | AGCGAGCUA----AUCAGGUGAU-- |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-449 | 193 | 230 | -UGGUCGAU---------------UGUUAUGUGACGGU | |||||||: :| | :||||| | AACCAGCUGCUCAGCCUAAAAGAAGCCA-AGGCUGCCC |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-485 | 401 | 423 | CUUAAGUA--GUGCC-GGUCGGAGA | || ||| :||||||| | ---CUCUUUGCACUCAUCAGCCUCA |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-494 | 64 | 84 | -UCCAAA-GGGCACAUACAAAGU | :||| |:| |||||||| | UGGGUCUGCUC---UAUGUUUCC |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-499 | 330 | 349 | UUUGUAGUGACGU-UCAGAAUU | |::|||||| ||||| | -UAUGUCACUGAGUAGUCUG-- |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-503 | 8 | 27 | GUCAUGACAAGGGCGACGAU | |||| ||||||||| | -UGUACGCUCCCCGCUGCUU |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-542-3p | 319 | 339 | AAGUCAAUAGUUAGACAGUGU | |||| ||: | |||||| | -ACAGUAAUUGGUAUGUCACU |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-542-5p | 331 | 359 | -GCACUGUACU------ACUAGGGGCUC- | :|| || ||| ||| ||||||| | AUGUCAC-UGAGUAGUCUGAGCCCCGAGC |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-93 | 23 | 52 | -GAUGGACGUGCUU-----GUCGUGAAAC | || ||| :| || ||||||||| | GCUUCCUUUAGGAUCCACUCAGCACUUUU |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-98 | 584 | 611 | -UUGUUAUGUUGAA----UGAUGGAGU | |:||| |||||| |||:|||: | CAGCAAAACAACUGACUGACUGCCUUU |
Ubxn4; Ubxd2; Ubxdc1 | rno-let-7a | 585 | 610 | UUGAUAUGUUG---GA-UGAUGGAgu | |:| | ||||| || |||:||| | AGCAAAACAACTGACTGACTGCCTtt |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-101a | 512 | 532 | gAAGUCAAUAGUGUCAUGACAU | ||: |||:| |||| :||||| | tTTTTGTTGT-ACAGGGCTGTA |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-101b | 512 | 532 | gAAGUCGAUAGUGUCAUGACAU | ||: |:|:| |||| :||||| | tTTTTGTTGT-ACAGGGCTGTA |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-106b | 35 | 51 | UAGACGUGACAGUCGUGAAAu | ||| ||| |||||||||| | ATC--CAC--TCAGCACTTTt |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-10a | 171 | 193 | guguuuaAGCCUAGAUGUCCCAU | || ||| |:|||||| | gtccttgTCTAATCAATAGGGTA |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-128a | 318 | 342 | uUUUCUCUGGCCA---AGUGACACu | | || |::||| |||||| | | cACAGTAATTGGTATGTCACTGAGt |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-128b | 318 | 342 | cUUUCUCUGGCCA---AGUGACACu | | || |::||| |||||| | | cACAGTAATTGGTATGTCACTGAGt |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-129* | 508 | 530 | uacGAAAAACCCCAU-UCCCGAa | ||||||| ||| |||||| | catCTTTTTGTTGTACAGGGCTg |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-130b | 392 | 412 | uacgGGAAAGUAGUAACGUGAc | | |||| || ||||||| | ttagCGTTTC-TCTTTGCACTc |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-134 | 27 | 48 | GGGAGACC-AGUUG-GUCAGUGu | ||:|: || || || ||| ||| | CCTTTAGGATCCACTCAG-CACt |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-140 | 179 | 199 | GAU--GGUAUCCCAUUUUGGUga | ||| | ||||||| ||||| | CTAATCAATAGGGT--AACCAgc |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-17 | 23 | 51 | uGAUGGA----C---GUGACAUUCGUGAAAc | || ||| | ||| | |||||||| | gCTTCCTTTAGGATCCAC--TCAGCACTTTt |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-192 | 526 | 542 | CCGACAGUUAAGUAUCCAGUc | |||||| | | |||||| | GGCTGT--A--CCGAGGTCAc |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-196a | 588 | 609 | ggUUGUUGUACU--UUGAUGGAu | |||||| ||| :|||:||| | aaAACAAC-TGACTGACTGCCTt |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-196b | 588 | 609 | ggUUGUUGUC-CUUUGAUGGAu | |||||| | :|||:||| | aaAACAACTGACTGACTGCCTt |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-20a | 24 | 51 | GAUGGA---CGU-GAU-AUUCGUGAAAu | || ||| | | | | | |||||||| | CTTCCTTTAGGATCCACTCAGCACTTTt |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-20b | 344 | 364 | ugGACGUGAUACUCGUGAAac | ||| :| |||||||| | gtCTGAGCCCCGAGCACTTaa |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-214 | 560 | 583 | GACGGACA-GACACGGAC---GACA | || || || ||| |||| |||| | CTCCCAGTGCTG-CCCTGATTCTGT |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-222 | 139 | 161 | cUCUGGGUCAUCGGUCUACAUCGA | | | :||| | | || |||||| | aAAAGTCAG-AACATGAAGTAGCT |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-24 | 331 | 353 | gACAAGGAC-GACUUGACUCGGu | ||| ||| | : ||||||| | aTGTCACTGAGTAGTCTGAGCCc |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-291-3p | 328 | 363 | CCGU---GUGUUUCA-C---CU------UCGUGAAa | ||:| ||| :||| | || ||||||| | GGTATGTCACTGAGTAGTCTGAGCCCCGAGCACTTa |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-292-3p | 26 | 49 | uGUGAGUUUU-GGACCGCCGUGAA | | :|:|::| || | |||||| | tCCTTTAGGATCCACTCAGCACTT |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-298 | 253 | 272 | ccuucuUGUCGGGAGGAGA-CGG | ||||| ||||| ||| | gacttcACAGC---CCTCTAGCC |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-29c* | 49 | 70 | cuugugGUCCUCUUUAGCCAGu | | ||:|||:| |||| | tttctgCTGGGGAAGTGGGTCt |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-30c | 54 | 84 | CGACUCUCACAUCC--------UACAAAUGU | ||||:|: ||:|| |||||| || | GCTGGGGAAGTGGGTCTGCTCTATGTTTCCA |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-31 | 157 | 180 | gUCGA--UACGGUCGUAGAACGGA | |||| ||||:|| ||||:|| | tAGCTGGATGCTAGGTCCTTGTCT |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-320 | 256 | 280 | AAG---CGGGAGAGUUGGGUCGAAAA | ||| ||||||| |:|||||| ||| | TTCACAGCCCTCT-AGCCCAGCGTTT |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-324-3p | 37 | 66 | GGU-CGUCGUG-------GACCCCGUCACC | ||| |||||| |||||| ||||| | CCACTCAGCACTTTTCTGCTGGGGAAGTGG |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-324-5p | 41 | 65 | uGUGGUUACGGGAU--CCCCUACGC | || || | ::||: ||||| |:| | tCAGCACTTTTCTGCTGGGGAAGTG |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-325 | 33 | 59 | ugugaaUGACUCGUG----GAUGAUCC | ||| ||||| ||:||:|| | ggatccACTCAGCACTTTTCTGCTGGG |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-327 | 253 | 271 | ugGGAGUACGGGGAGUUCc | |:||| ||||| || | gaCTTCACAGCCCTCTAGc |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-337 | 140 | 164 | UUUCCG--UAGUAUAUCCUCGACUU | |||| | | |||: || |||||:| | AAAGTCAGAACATGAAGTAGCTGGA |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-345 | 52 | 73 | cguGACCUGAUC-CCCAGUCGu | ||||: || ||||| || | ctgCTGGGGAAGTGGGTCTGCt |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-349 | 509 | 530 | ucuccaauucugucGUCCCGAC | |||||||| | atctttttgttgtaCAGGGCTG |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-34a | 213 | 241 | UUGUUGGU--CGAU----UCUGUGACGGu | |: |:||| |||: | ||| ||| | AGAAGCCAAGGCTGCCCCCGCCACCGCCa |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-34a | 190 | 209 | uugUUGGUCGAUUCUGUGACGGu | |||||||| :| | ||| | ggtAACCAGCT---GCTCAGCCt |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-34b | 580 | 609 | GUUAGUCGAUU-----AAUG--UGACGGAu | | :||||| || | || ||||||| | CTGTCAGCAAAACAACTGACTGACTGCCTt |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-34c | 586 | 608 | CG-UUAGUCGAUUGAUGUGACGGA | || || || ||:||| ||||||| | GCAAAACAACTGACT-GACTGCCT |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-351 | 187 | 209 | gUCCGAGUUUCCCGAGGAGUCccu | ||| | || ||| ||||| | tAGGGT-AACCAGCTGCTCAGcct |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-352 | 185 | 205 | augauaCGUUGGAUGAUGAGa | |:|||| :||:||| | aataggGTAACCAGCTGCTCa |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-363-5p | 18 | 43 | uuuaACGUAGCA----CUAGGUGGGc | ||| || | |||||||:| | ccgcTGCTTCCTTTAGGATCCACTCa |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-376b | 62 | 80 | UCACCUACAAGGAGAUACua | |||||:| | ||||||| | AGTGGGT-CTGCTCTATGtt |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-376c | 62 | 80 | gCACUUUAAAGGAGAUACAA | ||| ::| | ||||||||| | aGTG-GGTCTGCTCTATGTT |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-409-5p | 178 | 197 | guuucaacgAGCCCAUUGGa | | |||||||| | tctaatcaaTAGGGTAACCa |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-412 | 362 | 384 | ugcCGAUCACCUGGUCCACUuca | || || |:||||||| | taaGCGAGCTAATCAGGTGAtaa |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-449 | 217 | 241 | uGGU--CGAUUGUUAU-GUGACGGU | ||| |||: | : ||| |||| | gCCAAGGCTGCCCCCGCCACCGCCA |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-485 | 395 | 422 | CUUAAGUAGUGCCG------GUCGGAGa | | :||: || : || ||||||| | GCGTTTCTCTTTGCACTCATCAGCCTCa |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-499 | 329 | 350 | uuUGUAGUGACGU-UCAGAAUu | |::|||||| : ||||| | | gtATGTCACTGAGTAGTCTGAg |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-503 | 7 | 26 | guCAUGACAAGGGCGACGAu | |||| | ||||||||| | gtGTACGCTCCCCGCTGCTt |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-542-3p | 318 | 338 | aaGUCAAUAGUUAGACAGUGu | |||| ||:::| |||||| | caCAGTAATTGGTATGTCACt |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-542-5p | 330 | 357 | gcACUGU-ACU------ACUAGGGGCUC | || || ||| ||| ||||||| | taTGTCACTGAGTAGTCTGAGCCCCGAG |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-93 | 24 | 51 | GAUGGACGUGCU---U--GUCGUGAAAc | || ||| :| || | ||||||||| | CTTCCTTTAGGATCCACTCAGCACTTTt |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-98 | 585 | 610 | UUGUUAUGUUGA---A-UGAUGGAgu | |:||| |||||| | |||:||| | AGCAAAACAACTGACTGACTGCCTtt |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-106b | 44 | 51 | U-----AGACGUGAC-----------------AGUCGUGAAAU | || |:||| |||||||||| | GUACGCUCCCCGCUGCUUCCUUUAGGAUCCACUCAGCACUUUU |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-130a | 405 | 412 | --------UACG---GGA---AAAUUGU-------AACGUGAC | :|| |: ||||:|: ||||||| | CUAAUCAGGUGAUAACUGAUGUUUAGCGUUUCUCUUUGCACUC |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-130b | 405 | 412 | ------------------UACG----GGAAAGUAGUAACGUGAC | |||: | |||| || ||||||| | CUAAUCAGGUGAUAACUGAUGUUUAGCGUUUC-UCUUUGCACUC |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-17 | 44 | 51 | -----------UGAUGGAC----------GUGACAUUCGUGAAAC | :||:|:| |||| |||||||| | GUACGCUCCCCGCUGCUUCCUUUAGGAUCCACUC--AGCACUUUU |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-19a | 404 | 411 | AGU------------------CAAAACGUAUCU--AAACGUGU | |||| ||:| ||||||| | GCUAAUCAGGUGAUAACUGAUGUUUAGCGUUUCUCUUUGCACU |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-19b | 404 | 411 | AGU------------------CAAAACGUACCU--AAACGUGU | |||| ||:| ||||||| | GCUAAUCAGGUGAUAACUGAUGUUUAGCGUUUCUCUUUGCACU |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-20a | 44 | 51 | ------------GAUGGAC----------GUGAUAUUCGUGAAAU | ||:|:| |||| |||||||| | GUACGCUCCCCGCUGCUUCCUUUAGGAUCCACUC--AGCACUUUU |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-24 | 346 | 353 | G--------------------ACAAGGACGACUU-GACUCGGU | ||| ||| ||||||| | CAAGCCACACAGUAAUUGGUAUGUCACUGAGUAGUCUGAGCCC |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-291-3p | 356 | 363 | -------CCGU---GUGUUUCACC----------UUCGUGAAA | ||:| ||| :||| | :||||||| | AGUAAUUGGUAUGUCACUGAGUAGUCUGAGCCCCGAGCACUUA |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-349 | 523 | 530 | UCUCCAAUUCUGUC---------------------GUCCCGAC | |||||||| | AUCUUAUUUUUGCUGUAAAGCAUCUUUUUGUUGUACAGGGCUGU |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-34b | 602 | 609 | GU-------------UAGUCG--------AUUAAUGUGACGGAU | :||||| |:| |: ||||||| | UGCUGCCCUGAUUCUGUCAGCAAAACAACUGACUG-ACUGCCUU |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-376c | 73 | 80 | G------------------------CACUUUAAAGGAGAUACAA | |||:: | ||||||||| | CACUCAGCACUUUUCUGCUGGGGAAGUGGGUC-UGCUCUAUGUUU |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-409-5p | 190 | 197 | GUU----UCAACGAG-------------------CCCAUUGGA | :| |||| |||||||| | AGUAGCUGGAUGCUAGGUCCUUGUCUAAUCAAUAGGGUAACCA |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-485 | 415 | 422 | CUUA------------------AGUA--GUGCC-GGUCGGAGA | || ||| :||||||| | GAUAACUGAUGUUUAGCGUUUCUCUUUGCACUCAUCAGCCUCA |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-494 | 76 | 83 | ------------------------UCCAAA-GGGCACAUACAAAGU | :||| |:| |||||||| | UCAGCACUUUUCUGCUGGGGAAGUGGGUCUGCUC---UAUGUUUCC |
Ubxn4; Ubxd2; Ubxdc1 | rno-miR-93 | 44 | 51 | ---------------GAUGGACGUGCUU-----GUCGUGAAAC | || ||| :| || ||||||||| | GUACGCUCCCCGCUGCUUCCUUUAGGAUCCACUCAGCACUUUU |