DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004639 rno-miR-325-3p 445268 Ufc1 aaCUAUCCUCCACGAGUUAUUu || | | || ||||||| ugGAGACAACCUG-UCAAUAAa 2 21 291 311 [rn4:13:87181654-87181674:-] 0.5743 146 7 -10.78 -0.4134 MIMAT0004654 rno-miR-344-5p 445268 Ufc1 ggACCUUAGAUCGGUCCUC-GGACu ||||: | | :: |||| |||| ccUGGAGGC-AUUUUGGAGACCUGg 2 23 234 257 [rn4:13:87181708-87181731:-] 0.5743 124 0 -26.84 -0.2215 MIMAT0000592 rno-miR-344-3p 445268 Ufc1 ugccagUCCGAAACCGAUCU-AGu :| || | |||||| || acagagGGACUGUUGCUAGACUCu 2 18 23 46 [rn4:13:87181919-87181942:-] 0.4958 121 0 -12.65 -0.3568 MIMAT0000598 rno-miR-347 445268 Ufc1 acCCGCUGGGUCUCCCUGu ||| : ||||||||| gaGGCAGGACAGAGGGACu 2 18 15 33 [rn4:13:87181932-87181950:-] 0.4958 157 7 -25.88 -0.1974 MIMAT0000598 rno-miR-347 445268 Ufc1 acccgcUGGGUCUCCCUGu | |::||||||| caaaguAGCUGGAGGGACa 2 14 100 118 [rn4:13:87181847-87181865:-] 0.5975 149 7 -20.67 -0.8176 MIMAT0005330 rno-miR-674-3p 445268 Ufc1 aacaagacucuacccUCGACAc |||||| aaaguugcuaaauuaAGCUGUa 2 8 151 172 [rn4:13:87181793-87181814:-] 0.5743 120 6 -7.77 -0.1019 MIMAT0005337 rno-miR-760-3p 445268 Ufc1 aggggugucuggGUCUCGGc ||||||| cccuucuccaagCAGAGCCc 2 9 216 235 [rn4:13:87181730-87181749:-] 0.5743 140 7 -19.15 -0.2105 MIMAT0012833 rno-miR-582 445268 Ufc1 ucAUUGACCAACU-UGUU-GACAu |:|:| | || |||| |||| uuUGAUUUCUGGAGACAACCUGUc 2 21 282 305 [rn4:13:87181660-87181683:-] 0.5743 123 0 -13.29 -0.6500 MIMAT0012845 rno-miR-935 445268 Ufc1 cgccaUCGCCUUCGCCAUUGACc | | |::|: ||||||| uggagACCUGGGGU-GUAACUGa 2 19 247 268 [rn4:13:87181697-87181718:-] 0.5743 148 7 -17.64 -0.8371 MIMAT0012850 rno-miR-465 445268 Ufc1 gugUGGUCGUGGCAA-GAUUUAu ::|| || ||| |||||| aagGUCA-CAAAGUUGCUAAAUu 2 20 143 164 [rn4:13:87181801-87181822:-] 0.5743 121 6 -11.26 -0.8844 MIMAT0000892 rno-miR-223 445268 Ufc1 ccccauaaacuguUUGACUGu ||||||| agaccugggguguAACUGACa 2 9 250 270 [rn4:13:87181695-87181715:-] 0.5743 140 7 -21.30 -0.8623 MIMAT0005335 rno-miR-758 445268 Ufc1 ccaaucaCCUGGUCCAGUGUUu ||:| ||||||||| aacaaaaGGGCAAGGUCACAAa 2 16 132 153 [rn4:13:87181812-87181833:-] 0.5743 163 7 -23.00 -0.9562

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G055672 Ufc1 Rattus norvegicus 445268

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Ufc1 RAID00068344 rno-miR-3590-5p miRNA MIMAT0017889 Ufc1 mRNA 445268 Prediction 0.1828 Ufc1 RAID00224556 rno-miR-208a-5p miRNA MIMAT0017155 Ufc1 mRNA 445268 Prediction 0.1828 Ufc1 RAID00836499 rno-miR-223-3p miRNA MIMAT0000892 Ufc1 mRNA 445268 Prediction 0.1828 Ufc1 RAID01149223 rno-miR-758-3p miRNA MIMAT0005335 Ufc1 mRNA 445268 Prediction 0.1828 Ufc1 RAID03023627 rno-miR-347 miRNA MIMAT0000598 Ufc1 mRNA 445268 Prediction 0.1828 Ufc1 RAID03553544 rno-miR-325-3p miRNA MIMAT0004639 Ufc1 mRNA 445268 Prediction 0.2202 Ufc1 RAID03668369 rno-miR-208b-5p miRNA MIMAT0017844 Ufc1 mRNA 445268 Prediction 0.1828