DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0003175 rno-miR-543* 266772 Klhl12 ucUUC-ACGUGGCG-CUUACAAa |:| | | :: | ||||||| gaAGGAUCCUUUCCAGAAUGUUc 2 20 42 64 [rn4:13:47433233-47433255:+] 0.5836 141 7 -11.06 -0.3622 MIMAT0005323 rno-miR-532-3p 266772 Klhl12 acguucggaacccACACCCUCc |||||||| gcugggaacaguuUGUGGGAGa 2 10 18 39 [rn4:13:47433209-47433230:+] 0.6656 145 7 -19.18 -1.1859 MIMAT0000834 rno-miR-128 266772 Klhl12 uuucucuggccaAGUGACACu |||||||| aauguucacuucUCACUGUGu 2 10 58 78 [rn4:13:47433249-47433269:+] 0.5352 145 7 -13.04 -0.5146 MIMAT0000844 rno-miR-138 266772 Klhl12 gccggACUAAGUGUUGUGGUCGa | |||:: :|||||||| --cugUUAUUUG-GACACCAGCu 2 19 1 20 [rn4:13:47433192-47433211:+] 0.6992 156 7 -18.29 -0.1605 MIMAT0000853 rno-miR-150 266772 Klhl12 guGACCAUGUUCCCA-ACCCUCu |||| | || | |||||| agCUGGGAACAGUUUGUGGGAGa 2 21 17 39 [rn4:13:47433208-47433230:+] 0.6656 124 6 -24.23 -1.1033 MIMAT0000878 rno-miR-205 266772 Klhl12 guCUGAGGCCACCUUACUUCCu | :| :|| ||||||||| caGUUUGUGGGAGAAUGAAGGa 2 21 26 47 [rn4:13:47433217-47433238:+] 0.5836 160 7 -27.53 -0.8029

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G100045 Klhl12 Rattus norvegicus 266772

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Klhl12 rno-miR-101a 92 111 GAAGUCAAUAGU-GUCAUGACAU- ||| || ||||:||||: --ACAGG---CACCAGUGCUGUGA Klhl12 rno-miR-10b 78 98 -UGUGUUUAAGCCAAGAUGUCCC :||||: || :|||||| UGCACAGGG-CGA--UUACAGGC Klhl12 rno-miR-128a 93 111 UUUUCUCUGGCCAAGUGACACU ||: ||| || :|||||| --CAGGCACCAGU--GCUGUGA Klhl12 rno-miR-128b 93 111 CUUUCUCUGGCCAAGUGACACU ||: ||| || :|||||| --CAGGCACCAGU--GCUGUGA Klhl12 rno-miR-133a 15 51 UGUCGACC-------AACUUCC--------CCUGGUU ||||||| ||| :|| |||:| CCAGCUGGGAACAGUUUGUGGGAGAAUGAAGGAUCC- Klhl12 rno-miR-138 6 22 CUAAGUGUUGUGGUCGA- |: :||||||||| --AUUUGGACACCAGCUG Klhl12 rno-miR-146 52 74 UUGGGUACCUUAAGUCAAGAGU- :||| :|||| |||||| -UUCCAGAAUGUUCACUUCUCAC Klhl12 rno-miR-148b 72 84 UGUUUCAAGACACUACGUGACU ||||| ||||| -------ACUGUG-UGCACA-- Klhl12 rno-miR-150 17 41 GUGACCA-UGUUCCCAACCCUCU- :|||| |||: ||||||| AGCUGGGAACAGUUUGUGGGAGAA Klhl12 rno-miR-17 64 84 -UGAUGGACGUGACAUUCGUGAAAC ||| :|| ||||||: |||| CACU-UCU-CACUGUGUGCACA--- Klhl12 rno-miR-18 73 102 -AUAGACGUGAUCUA---------CGUGGAAU |:| ||||| ||: ||||| CUGUGUGCAC-AGGGCGAUUACAGGCACCA-- Klhl12 rno-miR-183 81 111 -GUCAC-UUAAGA----UGGUCACGGUAU- ||| :||| ||||||||::|: ACAGGGCGAUUACAGGCACCAGUGCUGUGA Klhl12 rno-miR-205 25 49 -GUCUGAGGCCAC-CUUACUUCCU- ||| | :|| | |||||||||| ACAGUUUGUGG-GAGAAUGAAGGAU Klhl12 rno-miR-207 20 42 UUCCCUCCUCUCGG---UCCUCUUCG |||| ||:: :|||||| -UGGGAAC--AGUUUGUGGGAGAAU- Klhl12 rno-miR-210 83 104 AGUCGGCGACAGUGUGCGU-GUC- :| || |:||| ||| ||| -AGGGCGA--UUACAGGCACCAGU Klhl12 rno-miR-25 81 111 AGUCUGGCU-----CUGU--UCACGUUAC- |||: ||| |:|| ||||| :|| ACAGGGCGAUUACAGGCACCAGUGCUGUGA Klhl12 rno-miR-326 34 60 UGACCUC---CUUCCC-----GGGUCUCC |||| ||||| :||||| --GGGAGAAUGAAGGAUCCUUUCCAGAA- Klhl12 rno-miR-330 72 111 AGAGACG---------------UCCG-GGACACGAAACG || ||: |||| || ||||| || ACUGUGUGCACAGGGCGAUUACAGGCACCAGUGCUGUGA Klhl12 rno-miR-339 68 88 ACUCGAG-GAC-CUCCUGUCCCU ||| ||| | | |||||| ---UCUCACUGUGUGCACAGGGC Klhl12 rno-miR-342 19 41 CUGCCCACGCUAAAGACACACUCU- :||| |:|||| |||| -CUGGGAACAG--UUUGUGGGAGAA Klhl12 rno-miR-343 18 41 AGACCCGUGUGC--CUCCCUCU- ||||| ||| | |||||| GCUGGGAACAGUUUGUGGGAGAA Klhl12 rno-miR-349 82 109 -UCUC-C-AAU-UCUGUCGUCCCGAC- ||:| | ||| ||:|| ||| |||| CAGGGCGAUUACAGGCACCAGUGCUGU Klhl12 rno-miR-351 74 98 GUCCGA--GUUUCCCGAGGA-GUCCCU |: || ||||| |||| --UGUGUGCACAGGGCGAUUACAGGC- Klhl12 rno-miR-377 53 81 -GGUUUU-CAACG-GAA-----ACACACUA |||:|| ||| | ||| |||||| UCCAGAAUGUU-CACUUCUCACUGUGUGC- Klhl12 rno-miR-497 80 110 AUGU----UUGGUGUCA-----CACGACGAC ||| :|::|||| ||||||: CACAGGGCGAUUACAGGCACCAGUGCUGUG- Klhl12 rno-miR-664 17 46 AUCCGACCC----------CUCAUUUACUUAU |||||| |:| :|||||| --AGCUGGGAACAGUUUGUGGGAGAAUGAAG- Klhl12 rno-miR-101a 90 109 gAAGUCAAUAGUGUCAUGACAu | ||| | | ||||:|||| tTACAGGCA-C-CAGTGCTGTg Klhl12 rno-miR-10b 79 97 uGUGUUUAAGCCAAGAUGUCCc ||||:: || :|||||| gCACAGG-GCG--ATTACAGGc Klhl12 rno-miR-128a 91 110 uUUUCUCUGGCCAAGUGACACU | ||: ||| | ::|||||| tACAGGCACCAG--TGCTGTGA Klhl12 rno-miR-128b 91 110 cUUUCUCUGGCCAAGUGACACU | ||: ||| | ::|||||| tACAGGCACCAG--TGCTGTGA Klhl12 rno-miR-133a 1 28 uGUCGACCAACU-----UC--CCCUGGUu | |:| |||: || |||| || -CTGTTATTTGGACACCAGCTGGGAACAg Klhl12 rno-miR-138 5 20 cUAAGUGUUGUGGUCGA |||:: :||||||||| tATTTG-GACACCAGCT Klhl12 rno-miR-146 51 72 uugGGUACCUU--AAGUCAAGAGU ||| ||| |||| |||||| tttCCA--GAATGTTCACTTCTCA Klhl12 rno-miR-148b 65 85 uguuucaaGACACUACGUGACu ||||| ||||| | acttctcaCTGTG-TGCACAGg Klhl12 rno-miR-150 16 39 GU-GACCAUGUUCCCA-ACCCUCU || |||| | || | ||||||| CAGCTGGGAACAGTTTGTGGGAGA Klhl12 rno-miR-17 65 86 UGAUGGACGUGACAUUCGUGaaac ||| :|| ||||||: |||| ACT-TCT-CACTGTGTGCACaggg Klhl12 rno-miR-18 74 103 AUAGACGUG--------AUCUACGUGGaau |:| ||||| || | ||||| TGTGTGCACAGGGCGATTACAGGCACCagt Klhl12 rno-miR-183 82 109 GUCAC-UUAA-G---AUGGUCACGGUAu ||| | :||| | ||||||||::| CAGGGCGATTACAGGCACCAGTGCTGTg Klhl12 rno-miR-205 26 47 GUCUGAGGCCACCUUACUUCCU ||| :| :|| |||||||||| CAGTTTGTGGGAGAATGAAGGA Klhl12 rno-miR-207 19 42 uuCCCUCCUCUCG-GUCCUCUUcg |||| || : ::|||||| ctGGGAACAGTTTGTGGGAGAAtg Klhl12 rno-miR-210 63 84 AGUCGGCGACAGUG---UGCGUGUC ||| |: | |||| ::|||||| TCA-CTTC--TCACTGTGTGCACAG Klhl12 rno-miR-326 32 60 ugaCCUC---CUUCC-----CGGGUCUcc |||| ||||| :||||| gtgGGAGAATGAAGGATCCTTTCCAGAat Klhl12 rno-miR-330 87 110 agagACGUCCG-GGACACGAAACg | ||||| || ||||| || cgatTACAGGCACCAGTGCTGTGa Klhl12 rno-miR-339 65 87 acucGAG-GAC-CUCCUGUCCCu ||| ||| | | |||||| acttCTCACTGTGTGCACAGGGc Klhl12 rno-miR-342 18 39 CUGCCCACGCUAAAGACACACUCU | :||| | :|| |||| |||| GCTGGGAACAGTT--TGTGGGAGA Klhl12 rno-miR-349 85 107 uCUCCAAU-UCUGUCGUCCCGAC | | ||| ||:|| ||| |||| gGCGATTACAGGCACCAGTGCTG Klhl12 rno-miR-351 65 87 guccGAGUUUCCCGAGGAGUCCCu |||| | | | | ||||| acttCTCACTGTG-TGCACAGGGc Klhl12 rno-miR-377 54 81 GGUUUU-CAACGGAA-----ACACACua |||:|| ||| ||| |||||| CCAGAATGTTCACTTCTCACTGTGTGca Klhl12 rno-miR-497 91 110 AUGUUUGGUGUCACACGACgac ||||::| || |||||| TACAGGCACCA--GTGCTGtga Klhl12 rno-miR-664 26 46 aUCCGAC-CCCUCAUUUACUUau || :|| ||||| |||||| cAGTTTGTGGGAG--AATGAAgg Klhl12 rno-miR-205 40 47 ---------------------GUCUGAGGCCACCUUACUUCCU ||| :| :|| |||||||||| UAUUUGGACACCAGCUGGGAACAGUUUGUGGGAGAAUGAAGGAU

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Klhl12 RAID00192445 rno-miR-138-5p miRNA MIMAT0000844 Klhl12 mRNA 266772 Prediction 0.1828 Klhl12 RAID00567981 rno-miR-205 miRNA MIMAT0000878 Klhl12 mRNA 266772 Prediction 0.1828 Klhl12 RAID01421379 rno-miR-532-3p miRNA MIMAT0005323 Klhl12 mRNA 266772 Prediction 0.1828 Klhl12 RAID01775404 rno-miR-150-5p miRNA MIMAT0000853 Klhl12 mRNA 266772 Prediction 0.1828 Klhl12 RAID02381941 rno-miR-673-5p miRNA MIMAT0005328 Klhl12 mRNA 266772 Prediction 0.1828 Klhl12 RAID02642431 rno-miR-128-3p miRNA MIMAT0000834 Klhl12 mRNA 266772 Prediction 0.2202 Klhl12 RAID03023783 rno-miR-672-3p miRNA MIMAT0017312 Klhl12 mRNA 266772 Prediction 0.1828 Klhl12 RAID03869255 rno-miR-383-3p miRNA MIMAT0017197 Klhl12 mRNA 266772 Prediction 0.1828