DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004652 rno-miR-342-5p 503446 Asb12 gaguuagugucuaucGUGGGGa |||||| ugcuugagaauaauaCACCCCa 2 8 64 85 [rn4:X:83013861-83013882:-] 0.5414 120 6 -16.20 -0.2398 MIMAT0000603 rno-miR-20a* 503446 Asb12 acAUUCACGAGCAUUACGUca | || | | ||||||| ucUCAG-GAACCUAAUGCAug 3 20 12 31 [rn4:X:83013915-83013934:-] 0.5414 129 0 -8.22 -0.2285 MIMAT0003204 rno-miR-409-5p 503446 Asb12 guuucaacgaGCCCAUUGGa | ||||||| aaaaauacacCUGGUAACCc 2 11 40 59 [rn4:X:83013887-83013906:-] 0.5414 142 7 -10.87 -0.7005 MIMAT0012827 rno-miR-1224 503446 Asb12 gagguggaggggucAGGAGUg |||||| ucuccacaauaaaaUCCUCAg 2 8 106 126 [rn4:X:83013820-83013840:-] 0.5414 120 6 -20.83 -0.2280 MIMAT0000562 rno-let-7d 503446 Asb12 uuGA-UACGUUGGAUGAUGGAGa || ||||| |: |||||| acCUAAUGCA---UGAUACCUCc 2 21 20 39 [rn4:X:83013907-83013926:-] 0.5414 123 6 -14.11 -0.1056 MIMAT0000774 rno-let-7a 503446 Asb12 uugauAUGUUGGAUGAUGGAGu || :| |: |||||| gaaccUAAUGCAUGAUACCUCc 2 18 18 39 [rn4:X:83013907-83013928:-] 0.5414 121 6 -13.87 -0.1078 MIMAT0000775 rno-let-7b 503446 Asb12 uuggUGUGUU--GGAUGAUGGAGu || :|| | |: |||||| aggaACCUAAUGCAUGAUACCUCc 2 19 16 39 [rn4:X:83013907-83013930:-] 0.5414 121 6 -14.24 -0.1088 MIMAT0000776 rno-let-7c 503446 Asb12 uugGUAUGUUGGAUGAUGGAGu | || :| |: |||||| gaaCCUAAUGCAUGAUACCUCc 2 20 18 39 [rn4:X:83013907-83013928:-] 0.5414 123 6 -14.55 -0.1078 MIMAT0000777 rno-let-7e 503446 Asb12 uugauauguuggaggAUGGAGu |||||| gaaccuaaugcaugaUACCUCc 2 8 18 39 [rn4:X:83013907-83013928:-] 0.5414 120 6 -12.38 -0.1078 MIMAT0000778 rno-let-7f 503446 Asb12 uugauauguuagaugAUGGAGu |||||| gaaccuaaugcaugaUACCUCc 2 8 18 39 [rn4:X:83013907-83013928:-] 0.5414 120 6 -11.61 -0.1078 MIMAT0000779 rno-let-7i 503446 Asb12 uugucguguuugaugAUGGAGu |||||| gaaccuaaugcaugaUACCUCc 2 8 18 39 [rn4:X:83013907-83013928:-] 0.5414 120 6 -9.51 -0.1088 MIMAT0000812 rno-miR-33 503446 Asb12 acguuaCGUUGAUGUUACGUg | ||| :|||||| uucucaGGAAC-CUAAUGCAu 2 16 11 30 [rn4:X:83013916-83013935:-] 0.5414 129 6 -10.93 -0.1761 MIMAT0000819 rno-miR-98 503446 Asb12 uuGUUAUGUUGAAUGAUGGAGu :|||:|| |: |||||| ccUAAUGCA---UGAUACCUCc 2 21 21 39 [rn4:X:83013907-83013925:-] 0.5414 124 6 -12.91 -0.1078 MIMAT0001628 rno-miR-433 503446 Asb12 uguGGCUCCUCGGG-UA-GUACUa |: |||| ||: || ||||| uuuCUCAGGAACCUAAUGCAUGAu 2 20 10 33 [rn4:X:83013913-83013936:-] 0.5414 126 0 -18.16 -0.8644 MIMAT0003176 rno-miR-539 503446 Asb12 ugugugguuccuauuAAAGAGg |||||| ------auuuucaacUUUCUCa 2 8 1 16 [rn4:X:83013930-83013945:-] 0.5414 120 6 -5.31 -0.2279 MIMAT0005310 rno-miR-384-3p 503446 Asb12 uaacacuuGUU-AAAGA-UCCUUa ||| ||||| ||||| ---auuuuCAACUUUCUCAGGAAc 2 15 1 21 [rn4:X:83013925-83013945:-] 0.5414 125 0 -10.66 -0.8444

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G116650 Asb12 Rattus norvegicus 503446

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Asb12; rCG_36279 rno-miR-26a 48 73 CGGAUA---GGACCUAAUGAACUU- |||: || ||||:|||||: ACCUGGUAACCCAGAUUGCUUGAGA Asb12; rCG_36279 rno-miR-26b 47 73 UUGGAUA---GGACUUAAUGAACUU- ||||: || :|||:|||||: CACCUGGUAACCCAGAUUGCUUGAGA Asb12; rCG_36279 rno-miR-351 3 20 GUCCGAGUUUCCCGAGGAGUCCCU :|||| :|:|||||| ---UUUCAAC---UUUCUCAGGA- Asb12; rCG_36279 rno-miR-363-5p 59 85 -UUUAACGUAGCACUAG----GUGGGC |:||||| |:| || ||||| CAGAUUGC-UUGAGAAUAAUACACCCC Asb12; rCG_36279 rno-miR-433 7 35 -UGU--GGCUCCUCGGGUA--GUACUA- || |: |||| ||:| |||||| AACUUUCUCAGGAACCUAAUGCAUGAUA Asb12; rCG_36279 rno-miR-26a 51 71 cggAUAGGACCUAAUGAACUu || || ||||:||||| tggTAACCCAGATTGCTTGAg Asb12; rCG_36279 rno-miR-351 1 20 guccgAGUUUCCCGAGGAGUCCcu |||| :|:|||||| -atttTCAA---CTTTCTCAGGaa Asb12; rCG_36279 rno-miR-363-5p 60 84 UUUAACGUAGCAC----UAGGUGGGc |:||||| |:| | || ||||| AGATTGC-TTGAGAATAATACACCCc Asb12; rCG_36279 rno-miR-433 10 33 uguGGCUCCUCGGG-UA-GUACUA |: |||| ||: || |||||| tttCTCAGGAACCTAATGCATGAT

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Asb12 RAID00749219 rno-let-7f-5p miRNA MIMAT0000778 Asb12 mRNA 503446 Prediction 0.1828 Asb12 RAID01138156 rno-miR-433-3p miRNA MIMAT0001628 Asb12 mRNA 503446 Prediction 0.1828 Asb12 RAID01681940 rno-let-7b-5p miRNA MIMAT0000775 Asb12 mRNA 503446 Prediction 0.1828 Asb12 RAID01705281 rno-miR-223-5p miRNA MIMAT0017165 Asb12 mRNA 503446 Prediction 0.1828 Asb12 RAID02085940 rno-miR-1843b-5p miRNA MIMAT0035730 Asb12 mRNA 503446 Prediction 0.1828 Asb12 RAID02295893 rno-miR-384-3p miRNA MIMAT0005310 Asb12 mRNA 503446 Prediction 0.1828 Asb12 RAID02409097 rno-miR-33-5p miRNA MIMAT0000812 Asb12 mRNA 503446 Prediction 0.1828 Asb12 RAID02479275 rno-let-7e-5p miRNA MIMAT0000777 Asb12 mRNA 503446 Prediction 0.1828 Asb12 RAID02741940 rno-miR-539-5p miRNA MIMAT0003176 Asb12 mRNA 503446 Prediction 0.1828 Asb12 RAID03111035 rno-miR-98-5p miRNA MIMAT0000819 Asb12 mRNA 503446 Prediction 0.1828 Asb12 RAID03396833 rno-let-7a-5p miRNA MIMAT0000774 Asb12 mRNA 503446 Prediction 0.1828 Asb12 RAID03514836 rno-let-7d-5p miRNA MIMAT0000562 Asb12 mRNA 503446 Prediction 0.1828 Asb12 RAID03583328 rno-let-7i-5p miRNA MIMAT0000779 Asb12 mRNA 503446 Prediction 0.1828 Asb12 RAID03999142 rno-let-7c-5p miRNA MIMAT0000776 Asb12 mRNA 503446 Prediction 0.1828