DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004637 rno-miR-323* 261730 Aurka cgcuuGCGCGGU--GCCUGGUGGa | :|||| :|||||||| aauguCAUGCCAACUGGACCACCa 2 18 773 796 [rn4:3:163270840-163270863:-] 0.5060 156 7 -26.89 -0.3207 MIMAT0000574 rno-miR-140* 261730 Aurka ggcACCAAGAUGGGACAC-CAu || | |:|:||||| || cucUGCUCAUGCUCUGUGAGUg 2 19 972 993 [rn4:3:163270643-163270664:-] 0.5074 122 0 -18.45 -0.1761 MIMAT0004654 rno-miR-344-5p 261730 Aurka ggaccuuaGAUCGGUCCUCGGACu ||: :| ||||||| cucaaccaCUGUUCUAGAGCCUGu 2 17 450 473 [rn4:3:163271163-163271186:-] 0.5342 148 7 -18.97 -0.3823 MIMAT0000599 rno-miR-349 261730 Aurka ucuccaauucugucGUCCCGAc ||||||| gaaaugcgggugccCAGGGCUa 2 9 751 772 [rn4:3:163270864-163270885:-] 0.5060 140 7 -14.29 -0.2311 MIMAT0000604 rno-miR-350 261730 Aurka cacUUUCACAUACCCGAAAC-ACUu ||| | | ||||||| ||| ccuAAACU-AACUGGCUUUGUUGAa 2 22 877 900 [rn4:3:163270736-163270759:-] 0.5060 123 0 -13.45 -0.4382 MIMAT0000607 rno-miR-7a* 261730 Aurka uaccgucUGACACUAAACAACa |||| | ||||||| uaaacuaACUG-GCUUUGUUGa 2 16 879 899 [rn4:3:163270737-163270757:-] 0.5060 153 7 -13.07 -0.3021 MIMAT0004705 rno-let-7b* 261730 Aurka cccuuccgucauccAACAUAUc ||||||| gucaaaauaaagauUUGUAUAg 2 9 356 377 [rn4:3:163271259-163271280:-] 0.5342 140 7 -8.58 -0.8502 MIMAT0004710 rno-miR-17-3p 261730 Aurka gguguucacggaagUGACGUCa ||||||| caugcuugaguggaACUGCAGa 2 9 812 833 [rn4:3:163270803-163270824:-] 0.5060 140 7 -17.10 -0.2430 MIMAT0005445 rno-miR-29b-1* 261730 Aurka uuUAGAUUUGGUGGUA-UACUUu | ||::|||||||| ||||| ccAACUGGACCACCAUCAUGAAg 2 21 782 804 [rn4:3:163270832-163270854:-] 0.5060 148 0 -26.56 -0.1272 MIMAT0000813 rno-miR-34b 261730 Aurka guuaGUCGAUUAAUGU-GACGGAu :| || || ||| |||||| uguaUAACU-AUAACACCUGCCUg 2 20 553 575 [rn4:3:163271061-163271083:-] 0.5115 125 6 -16.54 -0.4634 MIMAT0004738 rno-miR-199a-3p 261730 Aurka auugGUUACACGUCUGA-UGACa || |||||| ||| |||| ugggCAUUGUGCA-ACUAACUGu 2 19 15 36 [rn4:3:163271600-163271621:-] 0.4389 132 0 -19.49 -0.2194 MIMAT0004740 rno-miR-218* 261730 Aurka gcgccacgaacugUCUUGGUAc |||||||| ugcccagccccuaAGAACCAUg 2 10 138 159 [rn4:3:163271477-163271498:-] 0.4937 145 7 -17.85 -0.2828 MIMAT0004743 rno-miR-300-5p 261730 Aurka uguuuccuaUUGGAGAGAAGUu |:| |||||||| aauccuuugAGCAUCUCUUCAc 2 14 588 609 [rn4:3:163271027-163271048:-] 0.5088 153 7 -12.05 -0.2176 MIMAT0003113 rno-miR-489 261730 Aurka cgACGGUAUAUACACUACAGUAa |||| : : ||||||| ggUGCCCAGGGCUAAAUGUCAUg 2 22 759 781 [rn4:3:163270855-163270877:-] 0.5060 141 7 -12.40 -0.1257 MIMAT0003174 rno-miR-540 261730 Aurka gguccuagcuGGAGACUGGa ::||||||| ccgccgugccUUUCUGACCu 2 11 630 649 [rn4:3:163270987-163271006:-] 0.5060 142 7 -19.56 -0.2179 MIMAT0003212 rno-miR-20b-3p 261730 Aurka ggUCUU-CACGAG-----UGUGACGUCa |||| ||||: : ||||||| ggAGAACAUGCUUGAGUGGAACUGCAGa 2 21 806 833 [rn4:3:163270803-163270830:-] 0.5060 142 7 -17.33 -0.2430 MIMAT0005286 rno-miR-878 261730 Aurka agAUGGGUCAU-A-CCACAGUACg |:||||| : | ||||||| ggUGCCCAGGGCUAAAUGUCAUGc 2 21 759 782 [rn4:3:163270854-163270877:-] 0.5060 150 7 -24.48 -0.1765 MIMAT0005286 rno-miR-878 261730 Aurka agAUGGGUCAUAC--C---ACAGUACg |||:: |||| | ||||||| gcUACUUUUUAUGUUGUUCUGUCAUGu 2 21 511 537 [rn4:3:163271099-163271125:-] 0.5229 146 7 -18.68 -0.5990 MIMAT0005290 rno-miR-883 261730 Aurka uaugacucucuaCAACGUCAAu | ||||||| agcaacugcccaGCUGCAGUUa 2 11 903 924 [rn4:3:163270712-163270733:-] 0.5060 142 7 -14.01 -0.1367 MIMAT0005308 rno-miR-380 261730 Aurka gcguaCAAG-AUACCAGUUGGUa |||| || ||||||| gugggGUUCAGAUCCUCAACCAc 2 18 436 458 [rn4:3:163271178-163271200:-] 0.5342 152 7 -13.56 -0.1102 MIMAT0005308 rno-miR-380 261730 Aurka gcguacaAGAUA-CCAGUUGGUa |||:| ||||||| agugcuaUCUGUCCAUCAACCAg 2 16 664 686 [rn4:3:163270950-163270972:-] 0.5060 146 7 -15.58 -0.1573 MIMAT0005319 rno-miR-484 261730 Aurka uagcccuccccuGA-CUCGGACu || ||||||| ucaaccacuguuCUAGAGCCUGu 2 11 451 473 [rn4:3:163271163-163271185:-] 0.5342 141 7 -14.56 -0.3853 MIMAT0005333 rno-miR-742 261730 Aurka aaAUGGGUUGUACCACCGAAAg | |: ||| ||||||| ugUCCUAAACUAACUGGCUUUg 2 21 874 895 [rn4:3:163270741-163270762:-] 0.5060 148 7 -13.27 -0.2923 MIMAT0012826 rno-miR-220 261730 Aurka uccaGAGACUGUGACAC-CACc ||| :| ||||| ||| ucugCUCAUGCUCUGUGAGUGu 2 18 973 994 [rn4:3:163270642-163270663:-] 0.5074 121 0 -16.32 -0.3259 MIMAT0012834 rno-miR-592 261730 Aurka uguaguagcgUAUAACUGUGUUa :|| ||||||| gcuuaaaaaaGUAGAGACACAAu 2 14 1119 1141 [rn4:3:163270495-163270517:-] 0.5199 145 7 -10.95 -0.5532 MIMAT0012853 rno-miR-761 261730 Aurka acaCAGUCAAAG-UGGGACGACg || |||| : ||||||| gccGUGCCUUUCUGACCUGCUGg 2 20 632 654 [rn4:3:163270982-163271004:-] 0.5060 150 7 -18.29 -0.1560 MIMAT0001619 rno-miR-322 261730 Aurka agguuuuGUACUU--AACGACGAc :| ||| ||||||| cagccccUAAGAACCAUGCUGCUu 2 16 142 165 [rn4:3:163271471-163271494:-] 0.4937 142 7 -12.63 -0.5468 MIMAT0000573 rno-miR-140 261730 Aurka gaugguaucccauuUUGGUGAc ||||||| ggguucagauccucAACCACUg 2 9 439 460 [rn4:3:163271176-163271197:-] 0.5342 140 7 -17.88 -0.1659 MIMAT0000602 rno-miR-20a 261730 Aurka gauGGAC--GUGAUAUUCG-UGAAAu :||| :::|| |:|| ||||| guuUCUGGAUGUUAAAGGCUACUUUu 2 21 494 519 [rn4:3:163271117-163271142:-] 0.5342 123 0 -12.45 -0.6844 MIMAT0000611 rno-miR-135b 261730 Aurka aguguauccuuaCU-UUUCGGUAu || :||||||| auuugguucacaGACGAAGCCAUu 2 12 1085 1108 [rn4:3:163270528-163270551:-] 0.5199 142 7 -13.27 -0.1753 MIMAT0000784 rno-miR-15b 261730 Aurka acaUUUGGUACUACACGACGAu :||||| ||||||| uaaGAACCA-----UGCUGCUu 2 20 149 165 [rn4:3:163271471-163271487:-] 0.4937 141 7 -15.78 -0.5194 MIMAT0000785 rno-miR-16 261730 Aurka gcGGUUAUAAAU-GCACGACGAu || || | | ||||||| agCCCCUAAGAACCAUGCUGCUu 2 21 143 165 [rn4:3:163271471-163271493:-] 0.4937 143 7 -14.89 -0.5504 MIMAT0000798 rno-miR-27b 261730 Aurka cgucuugaaucggUGACACUu ||||||| cauugugcaacuaACUGUGAg 2 9 19 39 [rn4:3:163271597-163271617:-] 0.4389 140 7 -13.86 -0.2564 MIMAT0000799 rno-miR-27a 261730 Aurka cgCCUUGAAUCG--G--UGACACUu || |:| || | ||||||| ugGGCAUUGUGCAACUAACUGUGAg 2 20 15 39 [rn4:3:163271597-163271621:-] 0.4389 141 7 -17.54 -0.2564 MIMAT0000814 rno-miR-34c 261730 Aurka cguuagUCGAUUGAUGUGACGGa ||| : |||||||| aagccgAGCACGGGACACUGCCu 2 18 948 970 [rn4:3:163270666-163270688:-] 0.5074 149 7 -21.23 -0.1071 MIMAT0000814 rno-miR-34c 261730 Aurka cgUUAGUCGAUUGA---UGU-GACGGa || :: ||||| ||| ||||| uuAAAUGUAUAACUAUAACACCUGCCu 2 22 548 574 [rn4:3:163271062-163271088:-] 0.5115 120 0 -16.18 -0.3209 MIMAT0000815 rno-miR-34a 261730 Aurka ugUUGG-UCG-AUUCUGUGACGGu |:|| ||| ::||||||||| gaAGCCGAGCACGGGACACUGCCu 2 21 947 970 [rn4:3:163270666-163270689:-] 0.5074 162 7 -26.53 -0.1060 MIMAT0000815 rno-miR-34a 261730 Aurka uguugGUCGAUUCUGU-GACGGu :| ||| ||| ||||| auguaUAACUAUAACACCUGCCu 2 18 552 574 [rn4:3:163271062-163271084:-] 0.5115 121 0 -14.81 -0.3209 MIMAT0000817 rno-miR-93 261730 Aurka gauGGACGUGC--UUGUCG-UGAAAc :||| |:| || :|| ||||| guuUCUGGAUGUUAAAGGCUACUUUu 2 21 494 519 [rn4:3:163271117-163271142:-] 0.5342 123 0 -14.04 -0.6807 MIMAT0000824 rno-miR-103 261730 Aurka aguaUC-GGGA--CAUGUUACGACGa || |||| | || ||||||| gcccAGCCCCUAAGAACCAUGCUGCu 2 20 139 164 [rn4:3:163271472-163271497:-] 0.4937 157 7 -22.39 -0.3372 MIMAT0000826 rno-miR-107 261730 Aurka acuaUC-GGGA--CAUGUUACGACGa || |||| | || ||||||| gcccAGCCCCUAAGAACCAUGCUGCu 2 20 139 164 [rn4:3:163271472-163271497:-] 0.4937 157 7 -21.02 -0.3372 MIMAT0000828 rno-miR-124 261730 Aurka ccGUAAGUGGCGCACG-GAAu ||||| | ||||| ||| caCAUUCCCACCGUGCUCUUc 2 19 1015 1035 [rn4:3:163270601-163270621:-] 0.5074 130 0 -19.21 -0.1348 MIMAT0004729 rno-miR-125a-3p 261730 Aurka ccGAGGGUUCUUGGAGUGGACa :| |||: :| ||||||| aaUUACCAGUGA--UCACCUGu 2 21 248 267 [rn4:3:163271369-163271388:-] 0.5342 149 7 -18.62 -0.3861 MIMAT0000834 rno-miR-128 261730 Aurka uuuCUC-UGGCCAAGUGAC-ACu ||| |:| ||||||| || uuuGAGCAUCUCUUCACUGCUGg 2 19 593 615 [rn4:3:163271021-163271043:-] 0.5088 125 0 -17.09 -0.1038 MIMAT0000838 rno-miR-132 261730 Aurka gcuggUACCGACAUCUGACAAu || | ||||||||| uaaagAUUUGUAUAGACUGUUu 2 18 363 384 [rn4:3:163271252-163271273:-] 0.5342 153 7 -14.23 -0.8918 MIMAT0000841 rno-miR-135a 261730 Aurka aguguauccuUAUUUUUCGGUAu | | :||||||| uuugguucacAGACGAAGCCAUu 2 14 1086 1108 [rn4:3:163270528-163270550:-] 0.5199 145 7 -12.58 -0.1753 MIMAT0000849 rno-miR-143 261730 Aurka acucGAUGUCACGAAGUA-GAGu ||:| ||| |||| ||| cugcCUGCUCUGC-UCAUGCUCu 2 19 965 986 [rn4:3:163270650-163270671:-] 0.5074 120 0 -14.80 -0.1483 MIMAT0000870 rno-miR-195 261730 Aurka cgguuauaaagacACGACGAu ||||||| ccccuaagaaccaUGCUGCUu 2 9 145 165 [rn4:3:163271471-163271491:-] 0.4937 140 7 -12.45 -0.5504 MIMAT0000879 rno-miR-206 261730 Aurka ggugugUGAAGGAAUGUAAGGu ||| | ||||||| cagaugACUGAC--ACAUUCCc 2 17 1004 1023 [rn4:3:163270613-163270632:-] 0.5074 141 7 -11.89 -0.1193 MIMAT0000883 rno-miR-212 261730 Aurka accggcaCUGACC---UCUGACAAu ||:| | |||||||| aaauaaaGAUUUGUAUAGACUGUUu 2 16 360 384 [rn4:3:163271252-163271276:-] 0.5342 146 7 -12.76 -0.8918 MIMAT0000885 rno-miR-214 261730 Aurka gaCGGACAGACACGGACGACa |||| |||| ||||||| guGCCUUUCUG-ACCUGCUGg 2 20 635 654 [rn4:3:163270982-163271001:-] 0.5060 165 7 -27.23 -0.1515 MIMAT0001543 rno-miR-449a 261730 Aurka uggUCGAUUGUUAUGUGACGGu ||| ||:: |||||||| ccgAGC--ACGGGACACUGCCu 2 20 951 970 [rn4:3:163270666-163270685:-] 0.5074 156 7 -22.32 -0.1082 MIMAT0001543 rno-miR-449a 261730 Aurka uggucgAUUGUUA-UGU-GACGGu |||| || ||| ||||| aauguaUAACUAUAACACCUGCCu 2 17 551 574 [rn4:3:163271062-163271085:-] 0.5115 127 0 -13.02 -0.3236 MIMAT0001549 rno-miR-365 261730 Aurka uauuccuaaaaaUCCCCGUAAu | ||||||| gaaucuggagccAUGGGCAUUg 2 11 2 23 [rn4:3:163271613-163271634:-] 0.4583 142 7 -14.96 -0.4422 MIMAT0001628 rno-miR-433 261730 Aurka uguggcuCCUCG-GGUAGUACUa ||| | ||||||||| gccaacuGGACCACCAUCAUGAa 2 16 781 803 [rn4:3:163270833-163270855:-] 0.5060 158 7 -20.45 -0.1303 MIMAT0003125 rno-miR-1 261730 Aurka uaUGUGUGAAGA-AAUGUAAGGu :|| |: || ||||||| guGCAGAUGACUGACACAUUCCc 2 21 1001 1023 [rn4:3:163270613-163270635:-] 0.5074 143 7 -15.27 -0.1288 MIMAT0003379 rno-miR-378 261730 Aurka ggaAGACUGAGGUUCA-GGUCa |: | |||||||| |||| gucUUAGCCUCCAAGUGCCAGu 2 19 268 289 [rn4:3:163271347-163271368:-] 0.5342 134 0 -25.09 -0.2596 MIMAT0003383 rno-miR-497 261730 Aurka augUUUGGUGUCACACGACGAc :||||| ||||||| uaaGAACCA-----UGCUGCUu 2 20 149 165 [rn4:3:163271471-163271487:-] 0.4937 141 7 -14.75 -0.5194 MIMAT0005284 rno-miR-874 261730 Aurka agCCAGGGAGCCCGGU-CCCGUc || :|| | |||| ||||| --GGAAUCUGGAGCCAUGGGCAu 2 21 1 21 [rn4:3:163271615-163271635:-] 0.4583 128 0 -23.35 -0.3246 MIMAT0005314 rno-miR-425 261730 Aurka aguugcccucacuAGCACAGUaa | |||||| auauguaaucuuuUAGUGUCAaa 3 11 339 361 [rn4:3:163271275-163271297:-] 0.5342 122 0 -7.70 -0.2020

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G092700 Aurka Rattus norvegicus 261730

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Aurka RAID00084474 rno-miR-15b-5p miRNA MIMAT0000784 Aurka mRNA 261730 Prediction 0.1828 Aurka RAID00205364 rno-miR-128-3p miRNA MIMAT0000834 Aurka mRNA 261730 Prediction 0.1828 Aurka RAID00265958 rno-miR-214-3p miRNA MIMAT0000885 Aurka mRNA 261730 Prediction 0.1828 Aurka RAID00515217 rno-miR-497-5p miRNA MIMAT0003383 Aurka mRNA 261730 Prediction 0.1828 Aurka RAID00520926 rno-miR-103-3p miRNA MIMAT0000824 Aurka mRNA 261730 Prediction 0.1828 Aurka RAID00743954 rno-miR-449a-5p miRNA MIMAT0001543 Aurka mRNA 261730 Prediction 0.1828 Aurka RAID00763787 rno-miR-484 miRNA MIMAT0005319 Aurka mRNA 261730 Prediction 0.1828 Aurka RAID01192177 rno-miR-433-3p miRNA MIMAT0001628 Aurka mRNA 261730 Prediction 0.1828 Aurka RAID01324758 rno-miR-365-3p miRNA MIMAT0001549 Aurka mRNA 261730 Prediction 0.1828 Aurka RAID01416505 rno-miR-20a-5p miRNA MIMAT0000602 Aurka mRNA 261730 Prediction 0.1828 Aurka RAID01433966 rno-miR-27a-3p miRNA MIMAT0000799 Aurka mRNA 261730 Prediction 0.1828 Aurka RAID01595178 rno-miR-107-3p miRNA MIMAT0000826 Aurka mRNA 261730 Prediction 0.1828 Aurka RAID01609272 rno-miR-6334 miRNA MIMAT0025075 Aurka mRNA 261730 Prediction 0.1828 Aurka RAID01820045 rno-miR-93-5p miRNA MIMAT0000817 Aurka mRNA 261730 Prediction 0.1828 Aurka RAID01868095 rno-miR-140-5p miRNA MIMAT0000573 Aurka mRNA 261730 Prediction 0.1828 Aurka RAID01949251 rno-miR-34c-5p miRNA MIMAT0000814 Aurka mRNA 261730 Prediction 0.1828 Aurka RAID02019873 rno-miR-206-3p miRNA MIMAT0000879 Aurka mRNA 261730 Prediction 0.1828 Aurka RAID02223100 rno-miR-195-5p miRNA MIMAT0000870 Aurka mRNA 261730 Prediction 0.1828 Aurka RAID02272162 rno-miR-135a-5p miRNA MIMAT0000841 Aurka mRNA 261730 Prediction 0.1828 Aurka RAID02291963 rno-miR-1-3p miRNA MIMAT0003125 Aurka mRNA 261730 Prediction 0.1828 Aurka RAID02481489 rno-miR-132-3p miRNA MIMAT0000838 Aurka mRNA 261730 Prediction 0.1828 Aurka RAID03037281 rno-miR-344a-5p miRNA MIMAT0004654 Aurka mRNA 261730 Prediction 0.1828 Aurka RAID03115178 rno-miR-135b-5p miRNA MIMAT0000611 Aurka mRNA 261730 Prediction 0.1828 Aurka RAID03140781 rno-miR-378a-3p miRNA MIMAT0003379 Aurka mRNA 261730 Prediction 0.1828 Aurka RAID03178045 rno-miR-322-5p miRNA MIMAT0001619 Aurka mRNA 261730 Prediction 0.1828 Aurka RAID03182201 rno-miR-874-3p miRNA MIMAT0005284 Aurka mRNA 261730 Prediction 0.1828 Aurka RAID03399939 rno-miR-425-5p miRNA MIMAT0005314 Aurka mRNA 261730 Prediction 0.1828 Aurka RAID03505679 rno-miR-125a-3p miRNA MIMAT0004729 Aurka mRNA 261730 Prediction 0.1828 Aurka RAID03535186 rno-miR-34a-5p miRNA MIMAT0000815 Aurka mRNA 261730 Prediction 0.1828 Aurka RAID03708829 rno-miR-27b-3p miRNA MIMAT0000798 Aurka mRNA 261730 Prediction 0.1828 Aurka RAID03756873 rno-miR-212-3p miRNA MIMAT0000883 Aurka mRNA 261730 Prediction 0.1828 Aurka RAID03798125 rno-miR-143-3p miRNA MIMAT0000849 Aurka mRNA 261730 Prediction 0.1828 Aurka RAID03810093 rno-miR-16-5p miRNA MIMAT0000785 Aurka mRNA 261730 Prediction 0.1828 Aurka RAID04042186 rno-miR-124-3p miRNA MIMAT0000828 Aurka mRNA 261730 Prediction 0.1828