DNA & RNA Element - miRNAMap |
Gene Name | Mature miRNA | Target Start | Target End | miRNA 3-5 | Alignment | Target 5-3 |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-1 | 94 | 115 | AUGUGUGAAGAAAUGUAAGGU- | :|| : |||||||| | GGCAGGAACCUG-ACAUUCCAA |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-10a | 105 | 134 | GUGUUUAAG-CCUAGAUG----UCCCAU- | ||| |||||||| :||||| | GACAUUCCAAGGAUCUACUCCAGGGGUAC |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-10b | 105 | 131 | -UGUGUUUAAGCCAAGAUG---UCCC- | |||: || ||||| |||| | GACAUUCCAA-GGAUCUACUCCAGGGG |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-125a | 113 | 143 | GUGUCCAAU------UUCCCA-GAGUC-CCU- | ||| |:|||| ||||| ||| | --AAGGAUCUACUCCAGGGGUACUCAGUGGAC |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-125b | 109 | 143 | -AGUGUUCAA---------UCCCA-GAGUC-CCU- | || |||| :|||| ||||| ||| | UUC-CAAGGAUCUACUCCAGGGGUACUCAGUGGAC |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-128a | 3 | 34 | -UUUU-CUCUGG-CCA--AG---UGACACU- | |:|| |||:|: || || :|||||: | GAGAACGAGGCUUGGAGCUCUGUGCUGUGGA |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-128b | 4 | 34 | -CUUUCUCUGG-CCA--AG---UGACACU- | ||| |||:|: || || :|||||: | AGAACGAGGCUUGGAGCUCUGUGCUGUGGA |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-140 | 24 | 44 | GAUGGUAUCCCAUUUUGGUGA | |:|::|:| ||::|||| | GUGCUGUGGAG-AAGGCCACC |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-140* | 22 | 53 | -ACA-GGCACCAA----GAUGGGA--CACCAU | ||| |:|||| | |||| |||| | CUGUGCUGUGGAGAAGGCCACCCAAGGUGGG- |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-181b | 57 | 83 | GGGUGG--CUG---UCGUUACUUACAA | |:|| ||: || |:||||||| | -ACGCCCAGAUCUGAGGAGUGAAUGUA |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-181c | 52 | 83 | -UGAGUGG----CUG---UCCA-ACUUACAA | |:|||| ||: ||| ||||||| | GAUUCACGCCCAGAUCUGAGGAGUGAAUGUA |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-185 | 138 | 159 | -CUUGAC--GGAAAGAGAGGU- | |:|| ||| ||||||| | UGGACACCACCUG-CUCUCCAC |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-193 | 14 | 43 | GACCCUGAAACA----------UCCGGUCAA | ||| :|| ||| |||||| | UUGGAGCUCUGUGCUGUGGAGAAGGCCAC-- |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-195 | 11 | 32 | -CGGUUAUAAAGACACGACGAU | ||: | |||||||||: | GGCUUGGAGCUCUGUGCUGUG- |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-19a | 229 | 250 | AGUCAAAACGUAUCUAAACGUGU- | ||||||:| ||:||||| || | --UGUUUUGUAGAGGUUUGC-CAA |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-19b | 229 | 250 | AGUCAAAACGUACCUAAACGUGU- | ||||||:| |:||||| || | --UGUUUUGUAGAGGUUUGC-CAA |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-205 | 61 | 87 | -GUCUGAGGCCACCUUACU----UCCU- | |||| ||:| |||:||| |||| | CCAGA-UCUGA-GGAGUGAAUGUAGGAG |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-206 | 94 | 115 | GGUGUGUGAAGGAAUGUAAGGU- | :|| : ||| |||||||| | -GGCAGGAA-CCUGACAUUCCAA |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-207 | 68 | 91 | UUCCCUCCUCUCG---GUCCUCUUCG | |||||| | :||||||:| | ---UGAGGAGUGAAUGUAGGAGAGGA |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-210 | 36 | 66 | AGUCGG------CGACAGU--GUGCGUGUC- | :||| | || ||||| ||| | -AGGCCACCCAAGGUGGGAUUCACGCCCAGA |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-221 | 58 | 85 | CUUUGGGUCG-------UCUGUUACAUCGA | :||||| || ||||||| | --CGCCCAGAUCUGAGGAGUGAAUGUAGG- |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-27a | 28 | 54 | -CGCCUUGAAUCGGUGA----CACUU- | |:|||: :||||| |||:: | UGUGGAGAA-GGCCACCCAAGGUGGGA |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-27b | 1 | 35 | -CGUCUUGAAUCGG-----------UGACACUU- | | ||||| :||: :|||||:| | AGGAGAACGAGGCUUGGAGCUCUGUGCUGUGGAG |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-296 | 1 | 25 | UGUCCUAA--CUCCCC-CC-CGGGA- | |||| |||| || ||:|| | --AGGAGAACGAGGCUUGGAGCUCUG |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-324-3p | 123 | 142 | -GGUCGUCGUGGACCCCGUCACC- | |||| :|:||: |||||| | UCCAGGGGUACU-----CAGUGGA |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-326 | 267 | 298 | -UGACCUCCUUCCCGGGU--------CUCC- | ||| |||||| ||||| |||| | AACUUGAGGAAUGGCCCCUGAUUCGUGAGGG |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-328 | 14 | 43 | UGCCUUCC-------CGUCUCUCCCGGUC | :|||: |::|||| ||||| | UUGGAGCUCUGUGCUGUGGAGAAGGCCAC |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-330 | 7 | 33 | AGAGACG--UC-CGGGACACGAAACG | | || :| ||:||||||| || | ACGAGGCUUGGAGCUCUGUGCUGUGG |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-331 | 113 | 133 | AAGAUCCUAUCC-GGGUCCCCG- | ||||| :|||||||: | ---AAGGAUCUACUCCAGGGGUA |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-333 | 125 | 149 | -UUUUCAUUGA-UCG--UGUGGUG- | |:::|| ||| ||: ||||||| | CAGGGGU-ACUCAGUGGACACCACC |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-342 | 6 | 37 | CUGC-CC--ACGCUAAAGACACA----CUCU- | ||| || || || |||||| |||| | AACGAGGCUUG-GAGCUCUGUGCUGUGGAGAA |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-343 | 48 | 89 | AGACCC---GUGUG----------CCUC--------CCUCU | |||| |||:| |||| ||||| | -GUGGGAUUCACGCCCAGAUCUGAGGAGUGAAUGUAGGAGAG |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-347 | 270 | 302 | -AC-CCG--CUGGGU--------CUCCCUGU- | || || |:||| ||||||:| | UUGAGGAAUGGCCCCUGAUUCGUGAGGGAUAA |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-351 | 113 | 143 | GUCC-----GAGUUUCCCGAGGAGUC-CCU- | ||| ||| |:|||: ||||| ||| | AAGGAUCUACUCCAGGGGUA-CUCAGUGGAC |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-363-5p | 24 | 46 | UUUAACGUAGCACUA-----GGUGGGC | ||| :|||: |||||| | ---GUGC--UGUGGAGAAGGCCACCCA |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-370 | 110 | 133 | UUGG-UCCAAGGUGGGGUCGUCCG- | || ||| ||:||:|||| :||: | -UCCAAGGAUCUACUCCAG-GGGUA |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-378 | 56 | 88 | -UGUGUC-CUGGA--CCUCA-----GUCCUC- | ||:| ||:|| ||||| :||||| | CACGCCCAGAUCUGAGGAGUGAAUGUAGGAGA |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-379 | 227 | 250 | AUGCAAGGUA---UCAGAUGGU- | |:||| :| :||:|:||| | GAUGUUUUGUAGAGGUUUGCCAA |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-382 | 239 | 273 | CUUAGGUGGUGCU-------------UGUUGAAG | ::| :||| || :|||||| | AGGUUUGCCAAGAAAGUUUAACCUCGGCAACUUG |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-412 | 10 | 54 | UGCCGAU-------------CACCU---------GGU-CCACUUCA | |||| ||||| ||| ||||:: | -AGGCUUGGAGCUCUGUGCUGUGGAGAAGGCCACCCAAGGUGGGA- |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-422b | 102 | 129 | CGGAAGACUG--AGGUUC-------AGGUCA | ||||| |||||| ||||| | ----CCUGACAUUCCAAGGAUCUACUCCAGG |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-483 | 43 | 79 | UGUUCUGCCCUCCC------------CUCCUCACU- | ||||::|||| ||||||||| | CCAAGGUGGGAUUCACGCCCAGAUCUGAGGAGUGAA |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-501 | 39 | 75 | AAAGUGGGU----CCCUGU-------------UUCCUAA | |||||| ||||: :|||| | --CCACCCAAGGUGGGAUUCACGCCCAGAUCUGAGGAG- |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-543 | 236 | 259 | -UCUUCACGUGGCGCUUACAAA- | |||:|| :|| ||| |||| | UAGAGGUUUGCCAAGAAAGUUUA |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-1 | 93 | 113 | augugugaaGAAAUGUAAGGU | | | |||||||| | aggcaggaaCCTGACATTCCA |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-10a | 103 | 131 | gugUUUAAG---CCUA---GAUGUCCCau | | |||| |||| || ||||| | ctgACATTCCAAGGATCTACTCCAGGGgt |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-10b | 101 | 129 | UGUGUU-UAAG---CC---AAGAUGUCCC | || ::| |||| || | || ||||| | ACCTGACATTCCAAGGATCTACTCCAGGG |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-125a | 117 | 141 | guguccaauUUCCCA-GAGUC-CCU | |:|||| ||||| ||| | atctactccAGGGGTACTCAGTGGA |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-125b | 121 | 141 | aGUGUUCAAUCCCA-GAGUC-CCU | | | || |||| ||||| ||| | aCTCCAG---GGGTACTCAGTGGA |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-128a | 5 | 27 | uUUUCUCUG-GCCAAGUGACACu | || |||:| :|| | ||||| | gAACGAGGCTTGGAGCTCTGTGc |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-128b | 5 | 27 | CUUUCUCUG-GCCAAGUGACACu | ||| |||:| :|| | ||||| | GAACGAGGCTTGGAGCTCTGTGc |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-140* | 11 | 34 | aCAGGCACCAAGAUGGGACACCau | | ::| | |||:: |||||| | gGCTTGGAGCTCTGTGCTGTGGag |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-181b | 60 | 82 | GGGU---GGCUGUCGUUACUUACAa | |||| |:| || |:||||||| | CCCAGATCTG--AGGAGTGAATGTa |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-181c | 57 | 82 | UGAGUGGCU-G--UCC-AACUUACAa | || | | || | ||| ||||||| | ACGCCCAGATCTGAGGAGTGAATGTa |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-185 | 139 | 157 | CUUGACG-GAAAGAGAGGU | |:|| | | | ||||||| | GGACACCACCTGCTCTCCA |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-193 | 22 | 44 | GACCCUGAAA---CAUCCGGUcaa | ||| | || | | |||||| | CTGTG-CTGTGGAGAAGGCCAccc |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-195 | 12 | 32 | CGGUUAUAAAGACACGACgau | ||: : | ||||||||| | GCTTGGAGCTCTGTGCTGtgg |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-19a | 227 | 249 | aguCAAAACGUAUCUAAACGugu | ||||||:| ||:||||| | gatGTTTTGTAGAGGTTTGCcaa |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-19b | 227 | 249 | aguCAAAACGUACCUAAACGugu | ||||||:| |:||||| | gatGTTTTGTAGAGGTTTGCcaa |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-205 | 62 | 85 | GUCU-GAGGCCAC-CUUACUUCCU | |||| || || | ||||| |||| | CAGATCTGAGGAGTGAATGTAGGA |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-206 | 92 | 113 | ggugugugaaGGAAUGUAAGGU | ||| |||||||| | taggcaggaaCCTGACATTCCA |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-207 | 65 | 90 | uuccCUCCUCUC---GGUCCUCUUCg | |||||| | :||||||:| | atctGAGGAGTGAATGTAGGAGAGGa |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-210 | 39 | 64 | aGUCGG--CGACAGU--GUGCGUGUC | || || | || | ||||| ||| | cCACCCAAGGTGGGATTCACGCCCAG |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-221 | 62 | 85 | cUUUGGG-UCGUCUGUUACAUCga | |:|:|: || || ||||||| | cAGATCTGAGGAGTGAATGTAGga |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-27a | 12 | 33 | CG--CCUUGAAUCGGUGACACUU | || |||:|| | ::|||||:| | GCTTGGAGCTCTG-TGCTGTGGA |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-27b | 12 | 33 | CG--UCUUGAAUCGGUGACACUU | || :||:|| | ::|||||:| | GCTTGGAGCTCTG-TGCTGTGGA |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-324-3p | 111 | 140 | GGU--C--GUCGUGGACCCC----GUCACC | ||| | | | || |||| |||||| | CCAAGGATCTACTCCAGGGGTACTCAGTGG |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-326 | 268 | 289 | UGACCUCCUU-CCCGGGUCUcc | ||| |||||| || ||| || | ACTTGAGGAATGGCCCCTGAtt |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-328 | 21 | 42 | ugccuuccCGUCUCUCCCGGUc | |::|||| ||||| | tctgtgctGTGGAGAAGGCCAc |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-330 | 12 | 32 | aGAGACGUCCGGGACACGAAACg | || || | ||:||||||| || | gCT-TGGA-GCTCTGTGCTGTGg |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-331 | 110 | 131 | AAGAUCCUAUCCG-GGUCCCCg | | | ||||| | ||||||| | TCCAAGGATCTACTCCAGGGGt |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-333 | 128 | 147 | uuuucauugaucgUGUGGUG | ||||||| | gggtactcagtggACACCAC |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-342 | 11 | 35 | CUG-CCCACGCUA-AAGACACACUCU | |:| || || | | ||||| |||| | GGCTTGGAGCTCTGTGCTGTG-GAGA |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-343 | 34 | 55 | agaCCCGUGUG--CCUCCCUcu | || ||| | || |||| | gaaGGCCACCCAAGGTGGGAtt |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-347 | 278 | 300 | ACCCG---CUGGGU-CUCCCUGU | ||| | ||::|: ||||||:| | TGGCCCCTGATTCGTGAGGGATA |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-370 | 109 | 131 | uuGG-UCCAAGGUGGGGUCGUCCg | || ||| ||:||:|||| :|| | ttCCAAGGATCTACTCCAG-GGGt |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-378 | 78 | 101 | UGUGUCCUGGACC---UCAGUCCUc | |:::|||| || || ||||| | ATGTAGGA-GAGGATTAGGCAGGAa |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-382 | 250 | 272 | CUU---AGGUGGUGCUUGUUGAAg | ||| |: ||| || :|||||| | GAAAGTTTAACCTCG-GCAACTTg |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-412 | 9 | 38 | ugCCGA---UC---ACCUGGU-CCACUUCa | |||| || || :|:: || |||| | gaGGCTTGGAGCTCTGTGCTGTGGAGAAGg |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-422b | 98 | 128 | cggaaGACUG--AGGU-------UCAGGUCa | ||||| |||| | ||||| | ggaacCTGACATTCCAAGGATCTACTCCAGg |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-483 | 55 | 77 | uGUUCUGCCCUCCCCUCCUCACU | || | | || ||||||||| | tCACGCCCAGATCTGAGGAGTGA |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-501 | 53 | 92 | aAAGU--GGGUC------CCU----------GUUUCCUAA | |||| ||||| ||| |:|||||| | aTTCACGCCCAGATCTGAGGAGTGAATGTAGGAGAGGATT |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-543 | 237 | 257 | UCUUCACGUGGCGCUUACAAA | |||:|| ::|| ||| |||| | AGAGGTTTGCCAAGAAAGTTT |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-1 | 106 | 113 | ---------------------AUGUGUGAAGAAA-UGUAAGGU | || :|| |||||||| | GGAGUGAAUGUAGGAGAGGAUUAGGCAGGAACCUGACAUUCCAA |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-181b | 75 | 82 | --------------------GGGU---GGCUGUCGUUACUUACAA | |||| |:|| | |:||||||| | CACCCAAGGUGGGAUUCACGCCCAGAUCUGA--GGAGUGAAUGUA |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-181c | 75 | 82 | -------------UGAGUGG----CUG---UCCA-ACUUACAA | |:|||| ||: ||| ||||||| | CACCCAAGGUGGGAUUCACGCCCAGAUCUGAGGAGUGAAUGUA |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-206 | 106 | 113 | GG----------------------UGUGUGAAGGAAUGUAAGGU | :|| : ||| |||||||| | GGAGUGAAUGUAGGAGAGGAUUAGGCAGGAA-CCUGACAUUCCAA |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-331 | 124 | 131 | --------------------AAGA-UCCUAUCC-GGGUCCCCG | ||| ||||| :|||||||: | GAUUAGGCAGGAACCUGACAUUCCAAGGAUCUACUCCAGGGGUA |
Rnf145; RGD1309561_predicted; rCG_32799 | rno-miR-483 | 70 | 77 | U--------GUUCUGCCCUCCC------------CUCCUCACU | |||| |||| ||||||||| | AAGGCCACCCAAGGUGGGAUUCACGCCCAGAUCUGAGGAGUGAA |