DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0012856 rno-miR-759 366854 Fbxo7 caguuuuaACAAACGUGAGACg | | | ||||||| acugcuggUCUCUCCACUCUGg 2 15 100 121 [rn4:7:19947568-19947589:-] 0.5409 146 7 -11.26 -0.2882 MIMAT0000606 rno-miR-7a 366854 Fbxo7 uguuguuUUAGUGAUCAGA-AGGu :| ::||:|||| ||| guuagguGACUGCUGGUCUCUCCa 2 17 92 115 [rn4:7:19947574-19947597:-] 0.5346 120 0 -16.24 -0.1635 MIMAT0000785 rno-miR-16 366854 Fbxo7 gcggUUAUAAAUGCAC-GACGAu |: : ||| ||| ||||| aaagAGGGGUUAGGUGACUGCUg 2 19 84 106 [rn4:7:19947583-19947605:-] 0.5346 122 0 -14.62 -0.1802 MIMAT0000862 rno-miR-185 366854 Fbxo7 agUCC-UUGACGGAAAGAGAGGu ||| :|||||: ||||||| uuAGGUGACUGCUGGUCUCUCCa 2 21 93 115 [rn4:7:19947574-19947596:-] 0.5346 167 7 -31.50 -0.1521 MIMAT0005320 rno-miR-495 366854 Fbxo7 uuCU-UCACGUGGUACAA-ACAAa || | ||: |::|||| |||| cuGACAAUGUUCUGUGUUAUGUUa 2 21 150 173 [rn4:7:19947516-19947539:-] 0.5409 127 0 -8.86 -1.1920

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G099599 Fbxo7 Rattus norvegicus 366854

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Fbxo7 rno-miR-100 40 65 GUGU---UCAAG-CCUAGAUGCCCAA :| ||||| || |||::||| UGCUCUCAGUUCUGGUUCUGUGGGC- Fbxo7 rno-miR-133a 45 71 UGUCG--ACCAACUU-CCCCUGGUU- |||: ||||| ||| ||||| UCAGUUCUGGUUCUGUGGGCACCAAG Fbxo7 rno-miR-133b 46 71 AUCG--ACCAACUU-CCCCUGGUU- ||: ||||| ||| ||||| CAGUUCUGGUUCUGUGGGCACCAAG Fbxo7 rno-miR-140* 47 64 ACAGGCACCAAGAUGGGACACCAU ||:| |||| :|||||| AGUUC-UGGU-----UCUGUGGG- Fbxo7 rno-miR-16 79 108 GCGG----UUAUA-AAUGCAC-GACGAU- ||| :| ||| ||| |||||: UGCCCAAAGAGGGGUUAGGUGACUGCUGG Fbxo7 rno-miR-185 98 117 CUUGACGGAAAGAGAGGU- :|||||: |||||||| UGACUGCUGGUCUCUCCAC Fbxo7 rno-miR-189 30 68 -UGACUAUAGUCGAGU-------------CAUCCGUG- :||||| || |||| ||:||||| UGCUGAUCUCUGCUCUCAGUUCUGGUUCUGUGGGCACC Fbxo7 rno-miR-199a 102 136 CUUGUCCAUC------AGACUUGU-----GACCC- :| ||| ||||:|: ||||| -UGCUGGUCUCUCCACUCUGGAUUCCCCUCUGGGA Fbxo7 rno-miR-204 60 94 -UCCGUA--UCCU------ACUG---UUUCCCUU :|||| |||| || |:||||: UGGGCACCAAGGACAAGGUUGCCCAAAGAGGGGU Fbxo7 rno-miR-205 119 142 GUCUGAGGCC--ACCUUACUUCCU :||:||| |||:|||:|| UGGAUUCCCCUCUGGGAUGGAGA- Fbxo7 rno-miR-211 60 94 -UCCGU--UUCCU------ACUG---UUUCCCUU :|||| ||||| || |:||||: UGGGCACCAAGGACAAGGUUGCCCAAAGAGGGGU Fbxo7 rno-miR-212 129 147 CCGGCACUGACCUCUGACAAU |:| || ||||||:||| -UCUGGGA-UGGAGAUUGUG- Fbxo7 rno-miR-214 78 108 GACGGA--------CAGA-CACGGACGACA |||| ||: ||| |||||| UUGCCCAAAGAGGGGUUAGGUGACUGCUGG Fbxo7 rno-miR-298 18 45 -CCU-----UCUUGUCGGGAGGAGACGG- ||| ||| ||: :||||||: UGGAAACGUAGAU--GCUGAUCUCUGCUC Fbxo7 rno-miR-326 50 92 UGACC--------------UCCU--UCC--CGGGU--CUCC |||| |||| ||| ||||| |||| UCUGGUUCUGUGGGCACCAAGGACAAGGUUGCCCAAAGAGGG Fbxo7 rno-miR-327 114 136 -UGGGAGUAC-GGGGAGUUCC- ||:|| : |||||| :|| CACUCUGGAUUCCCCUCUGGGA Fbxo7 rno-miR-331 74 95 AAGAUCCUAUCCGGG----UCCCCG- ||| |||| |||||: ---AAGGUU--GCCCAAAGAGGGGUU Fbxo7 rno-miR-336 69 95 -UCUGAUCUAUAC-----CUUCCCACU :||| ||:| ||:|||| AGGACAAGGUUGCCCAAAGAGGGGUU- Fbxo7 rno-miR-339 59 94 -ACUCGAGGACCUCCUG--------------UCCCU- ||:|| || ||||| ||||: GUGGGCACCA--AGGACAAGGUUGCCCAAAGAGGGGU Fbxo7 rno-miR-340 102 141 CCGAU------------AUUUCAUU---GACUCUGCCU- |||: |::| |||:||:||| UGCUGGUCUCUCCACUCUGGAUUCCCCUCUGGGAUGGAG Fbxo7 rno-miR-343 116 143 -AGACCCGU-----GUGCCUCCCUCU- ||||| | ||| ||||| CUCUGGAUUCCCCUCUGGGAUGGAGAU Fbxo7 rno-miR-347 59 94 -ACCCGC--------------UGGG--UCUCCCUGU ||||| :||| ||||||: GUGGGCACCAAGGACAAGGUUGCCCAAAGAGGGGU- Fbxo7 rno-miR-349 87 112 -UCUCCAAUUCUGU--CGUCCCGAC ||:|||||:| | || || || GAGGGGUUAGGUGACUGCUGGUCUC Fbxo7 rno-miR-376a 118 138 GCACCUAAAAGGAGAUGCUA- |||||| |||||: ||| -CUGGAUUCCCCUCUGGGAUG Fbxo7 rno-miR-378 62 101 -UGUG--UCCUGGA-------------CCUCAGUCCUC- :||| ||||| ||:||:||| | GGCACCAAGGACAAGGUUGCCCAAAGAGGGGUUAGGUGA Fbxo7 rno-miR-424 81 108 AGGUUUUGUACUUA----AC-GACGAC- |||||: | | || |||||| CCCAAAGAG-GGGUUAGGUGACUGCUGG Fbxo7 rno-miR-497 71 108 AUGUUU-----GGUG---UCA-----CAC-GACGAC- ||||: ||| :| ||| |||||| GACAAGGUUGCCCAAAGAGGGGUUAGGUGACUGCUGG Fbxo7 rno-miR-7 102 117 UUGUUUUAGUGAUCAGA-AGGU- :||:|||| |||| --------UGCUGGUCUCUCCAC Fbxo7 rno-miR-99b 40 65 GCGU---UCCAG-CCAAGAUGCCCAC || || || ||||||::||| UGCUCUCAGUUCUGGUUCUGUGGGC- Fbxo7 rno-miR-100 44 65 GUGUUCAAG-CCUAGAUGCCCaa | | ||||| || |||::||| CTC-AGTTCTGGTTCTGTGGGca Fbxo7 rno-miR-133b 48 69 aucGACCAACUUCCCC-UGGUU |||||| : ||| ||||| gttCTGGTTCTGTGGGCACCAA Fbxo7 rno-miR-140* 40 64 ACAGGCACCAAGA-UGGGACACCau || :| ||||| :::|||||| TGCTCTCAGTTCTGGTTCTGTGGgc Fbxo7 rno-miR-185 98 115 cuUGACGGAAAGAGAGGU |||||: |||||||| tgACTGCTGGTCTCTCCA Fbxo7 rno-miR-189 38 66 uGACUAUAGU------CGAGUCAUCCGUG ||| | ||| |:|| ||:||||| tCTGCTCTCAGTTCTGGTTCTGTGGGCAC Fbxo7 rno-miR-199a 98 122 cuUGUCCAUC--AGACUUGUGACCc || | |:| ||| || |||| tgACTGCTGGTCTCTCCACTCTGGa Fbxo7 rno-miR-204 69 93 UCC-GUAUCCUACUG---UUUCCCuu ||| || ||| || | |:|||| AGGACA-AGGTTGCCCAAAGAGGGgt Fbxo7 rno-miR-205 119 142 guCUGA--GGCCACCUUACUUCcu ||:| || |||:|||:|| tgGATTCCCCTCTGGGATGGAGat Fbxo7 rno-miR-211 69 93 UCCGUUUCCUACUG---UUUCCCuu ||| |||| || | |:|||| AGGACAAGGTTGCCCAAAGAGGGgt Fbxo7 rno-miR-212 128 147 ccGGCACUGACCUCUGACAau |:| || ||||||:||| ctCTGGGA-TGGAGATTGTgg Fbxo7 rno-miR-214 87 107 gacggacagaCACGGACGACa ||| |||||| gaggggttagGTGACTGCTGg Fbxo7 rno-miR-22 45 69 uGUCAAG---AAGUUGACCGUCGaa |||||| ||| :: |||| | tCAGTTCTGGTTCTGTGGGCACCaa Fbxo7 rno-miR-298 19 43 CCUU--CUUGU-CGGGAGGAGACGg |||| | | | ||: :|||||| GGAAACGTAGATGCTGATCTCTGCt Fbxo7 rno-miR-326 64 90 ugaccUCC--UUCC--CGGG--UCUCC ||| |||| |||| ||||| caccaAGGACAAGGTTGCCCAAAGAGG Fbxo7 rno-miR-327 115 134 UGGGA-GUACGGGGAGUUCC ||:|| || |||||| :|| ACTCTGGATTCCCCTCTGGG Fbxo7 rno-miR-331 65 93 aaGAUCCUAU--C--CGGG----UCCCCg | |||| | | |||| ||||| acCAAGGACAAGGTTGCCCAAAGAGGGGt Fbxo7 rno-miR-336 70 95 uCUGAUCUAUAC------CUUCCCAcu ||| ||:| || ||:|||| gGACAAGGT-TGCCCAAAGAGGGGTta Fbxo7 rno-miR-339 60 78 ACUCGAGGACCUCCUGUCCCu ||:|| || |||||| || TGGGCACC--AAGGACAAGGt Fbxo7 rno-miR-340 117 139 ccgauauuucauuGACUCUGCCU |||:||:||| tctggattcccctCTGGGATGGA Fbxo7 rno-miR-343 117 141 AGACC---CGUGUG--CCUCCCUCU ||||| | | | ||| ||||| TCTGGATTCCCCTCTGGGATGGAGA Fbxo7 rno-miR-347 74 94 acCCGCUGGG--UCUCCCugu ||: :||| |||||| aaGGTTGCCCAAAGAGGGgtt Fbxo7 rno-miR-349 88 111 UCUCCAAUU--CUGUCGUCCCGAc ||:|||||: ||| || || || AGGGGTTAGGTGACTGCTGGTCTc Fbxo7 rno-miR-376a 117 136 gcACCUAAAAGGAGAUGCUA |||||| |||||: ||| tcTGGATTCCCCTCTGGGAT Fbxo7 rno-miR-378 72 99 UGUGUC--CUGG----ACCUCAGUCCuc ||| :| | || ||:||:||| ACAAGGTTGCCCAAAGAGGGGTTAGGtg Fbxo7 rno-miR-424 80 106 aGGUUUUGUACUUA----AC-GACGAC || ||| | |::| || |||||| gCCCAAAGAGGGGTTAGGTGACTGCTG Fbxo7 rno-miR-497 81 106 auGUUUGGUGUCA---CAC-GACGAC |||| : :|| ||| |||||| ccCAAAGAGGGGTTAGGTGACTGCTG Fbxo7 rno-miR-7 94 115 uuguuuUAGUGAUCAGA-AGGU | ::||:|||| |||| taggtgACTGCTGGTCTCTCCA Fbxo7 rno-miR-99b 44 65 GCGUUCCAG-CCAAGAUGCCCac | | || || ||||||::||| CTC-AGTTCTGGTTCTGTGGGca Fbxo7 rno-miR-185 108 115 C-------------------------UUGACGGAAAGAGAGGU :|||||: |||||||| CAAGGUUGCCCAAAGAGGGGUUAGGUGACUGCUGGUCUCUCCAC

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Fbxo7 RAID00745741 rno-miR-495 miRNA MIMAT0005320 Fbxo7 mRNA 366854 Prediction 0.1828 Fbxo7 RAID00998686 rno-miR-185-5p miRNA MIMAT0000862 Fbxo7 mRNA 366854 Prediction 0.2202 Fbxo7 RAID01055525 rno-miR-7a-5p miRNA MIMAT0000606 Fbxo7 mRNA 366854 Prediction 0.1828 Fbxo7 RAID01296684 rno-miR-383-5p miRNA MIMAT0003114 Fbxo7 mRNA 366854 Prediction 0.1828 Fbxo7 RAID01445810 rno-miR-16-5p miRNA MIMAT0000785 Fbxo7 mRNA 366854 Prediction 0.1828 Fbxo7 RAID03026597 rno-miR-129-5p miRNA MIMAT0000600 Fbxo7 mRNA 366854 Prediction 0.1828 Fbxo7 RAID03494413 rno-miR-1912-3p miRNA MIMAT0017865 Fbxo7 mRNA 366854 Prediction 0.1828