| DNA & RNA Element - miRNAMap |
| Gene Name | Mature miRNA | Target Start | Target End | miRNA 3-5 | Alignment | Target 5-3 |
| Cul1; Cul1_predicted; rCG_28370 | rno-let-7a | 245 | 273 | UUGAU----AUGUUGGAUGAUG-GAGU- | :||: |:|| |||| :| ||:| | UGCUGAGGCUGCAUGCUACCGCACUUAA |
| Cul1; Cul1_predicted; rCG_28370 | rno-let-7c | 241 | 269 | UUGGUAUG---UUGG---AUGAUGGAGU- | ||||:| ::|: |:||||| || | -UCCAUGCUGAGGCUGCAUGCUACCGCAC |
| Cul1; Cul1_predicted; rCG_28370 | rno-let-7e | 74 | 90 | UGAUAUGUUGGA-GGAUGGAGU | :||:|| |||:|| | ----AGCAGCCAGCCUGCCA-- |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-101b | 141 | 162 | GAAG-UCGAUAGUGUCAUGACAU | || ||||| :||| |||| | -CUCAAGCUACAGCAGGACUGC- |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-10a | 3 | 17 | GUGUUUAAGCCUAGAU-GUCCCAU | ||||| |||||| | ----------CAUCUAGCAGGGUC |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-125a | 151 | 168 | GUGUCCAAUUUCCCAGAGUCCCU | :|||| |||||| | AGCAGGACUG-----CUCAGGA- |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-125b | 2 | 25 | AGUGUUCAAUCCCAGAGUCCCU- | ||: |||||||| | || | CCAUCUAGCAGGGUCUCCGUGAC |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-127 | 200 | 238 | UCGGU---------------UCGAGUCUGCCUA-GGCU- | |||| || |||| ||: |||| | UGCCAUUUACCCUAACUCACAGA-CAGAGGGGAACCGAA |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-133a | 217 | 238 | -UGUCGACCAACUUCCCC-UGGUU- | |||| :||||| |||:| | CACAGACA----GAGGGGAACCGAA |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-138 | 67 | 85 | CUAAGUGUUGU-GGUCGA | :||||:|:|| ||||| | AGUUCAUAGCAGCCAGCC |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-15b | 241 | 258 | ACAUUUGGUACUACA-CGACGAU | ||||| || ||||| | -----UCCAUGCUGAGGCUGCA- |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-17 | 245 | 272 | -UGAUG--GACGUGACAUU-CGUGAAAC | :||: |||||: |||||| | UGCUGAGGCUGCAUGCUACCGCACUUA- |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-181a | 312 | 340 | -UGA-GUG-GCUGUCGCA---ACUUACAA | :| ||| ||| |||| |||||| | GGCAGCACACGAGAGCGAGUCUGAAUGG- |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-181b | 316 | 340 | GGGUG-GCUGUCGUU---ACUUACAA | ||| ||| |||:| |||||| | -GCACACGAGAGCGAGUCUGAAUGG- |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-184 | 1 | 29 | UGGGAAUA--GUCA-AGAGGCA---GGU- | ||| ||| ||||||| ||| | -CCCAUCUAGCAGGGUCUCCGUGACCCAC |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-187 | 311 | 331 | GCCGACGUUGUGUUCUGUGCU- | ||| || ||||:||| :||| | AGGCAGC-ACACGAGA-GCGAG |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-191 | 431 | 452 | -UCGACGAAAACCCUAAGGCAAC | ||:||| ||||| || ||| | AAGUUGCAUUUGG--UUUUGUUU |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-204 | 220 | 233 | UCCGUAUCCUACUGUUUCCCUU- | ||||:||||:| | ----------AGACAGAGGGGAA |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-20a | 250 | 272 | GAUGGACGUGAUAUU-CGUGAAAU | : |||||: |||||| | -AGGCUGCAUGCUACCGCACUUA- |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-20b | 252 | 272 | UGGACGUGAUACU-CGUGAAAC | |||||: |||||| | -GCUGCAUGCUACCGCACUUA- |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-20b* | 225 | 259 | GUCUUC--------------ACGAGUGUGACGUCA | || | |||| | :||||| | GAGGGGAACCGAACCUUCCAUGCUGAGGCUGCAU- |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-210 | 297 | 322 | AGUCGGCGACAGUGUG---CGUGUC | ||||:|: ||| | ||||| | ACAGCUGUCGUCUGAGGCAGCACAC |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-211 | 220 | 233 | UCCGUUUCCUACUGUUUCCCUU- | ||||:||||:| | ----------AGACAGAGGGGAA |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-24 | 239 | 264 | GACAAGG-ACGACUU-GACU--CGGU- | |||| ||||||: ||| ||:| | --CUUCCAUGCUGAGGCUGCAUGCUAC |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-28 | 273 | 291 | GAGUUAUCUGACACUCGAGGAA | |||||| |:|| ||||| | AUCAAUACAUUG---GCUCCC- |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-30a-3p | 251 | 275 | -CGACGUUUGUAGGC-UGACUUUC | |||||| :| ||| ||| ||| | GGCUGCAUGCUACCGCACUUAAAU |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-323 | 322 | 358 | -UCUC---CAG------CUGG---CACAUUACACG- | |||| ||| |||| ||||||| ||| | GAGAGCGAGUCUGAAUGGACCCACGUGUAAUCUGCU |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-330 | 330 | 358 | AGAGACGU-CC-GGGA-CACGAA--ACG- | |||| || ||| |||: ||| | -GUCUGAAUGGACCCACGUGUAAUCUGCU |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-337 | 309 | 338 | UUUCCGUA--GUAUA-UC-CUC-GACUU- | :||||| || || ||| ||||| | UGAGGCAGCACACGAGAGCGAGUCUGAAU |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-342 | 375 | 403 | CUGCCCACGCUAAAG----------ACACACUCU | |||:| |||| ||||||| | ----AGUGUG-UUUCAUUUUUUUAAUGUGUGAA- |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-343 | 306 | 332 | -AGAC-CCG---UGUGC-CUCCCUCU | |||| ||| ||||| ||| ||| | GUCUGAGGCAGCACACGAGAGCGAGU |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-346 | 151 | 175 | UCUCCGUCCG--UGAGUCC-GUCUGU- | ||||| :|||||| | |||| | ---AGCAGGACUGCUCAGGACUGACAC |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-349 | 137 | 162 | UCUCCAA--UUC--UGUCGUCCCGAC- | ||| ||| |||||||| ||| | --UGGUCUCAAGCUACAGCAGGACUGC |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-34a | 73 | 91 | -UUGUUGGUCGAUUCUGUGACGGU- | |:||:||||| |||||| | UAGCAGCCAGC-------CUGCCAC |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-351 | 137 | 168 | GUCC-GAGUU--------UCCCGAGGAGUCCCU | || ||||| ||| || |||||| | -UGGUCUCAAGCUACAGCAGGACUGCUCAGGA- |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-370 | 130 | 158 | UUGGUCCA--AGG---UGGGGUCGUCCG | ||||| ||: :|: ||||||| | CACCAGCUGGUCUCAAGCUACAGCAGGA |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-377 | 364 | 403 | -GGUUUUCA----ACGGAA------------ACACACUA | ||| || ||: || ||||||| | ACCAUUUGUAUAGUGUGUUUCAUUUUUUUAAUGUGUGAA |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-378 | 151 | 169 | UGUGUCCUGGACCUCAGUCCUC | :||||||: |||||| | -AGCAGGACUGC---UCAGGAC |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-383 | 116 | 144 | -UC-GGUGUCA---GUGGAAGACUAGA- | || ||||||| |||| |||:||| | GAGACCACAGUUUCCACCAGCUGGUCUC |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-422b | 13 | 47 | -CGGAAG-ACUGAGGU---------UC-AGGUCA- | |:|| | |||| ||| || |||||| | GGUCUCCGUGAC-CCACGAGCAGAUAGUUCCAGUG |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-424 | 240 | 258 | -AGGUUUUGUACUUAACGACGAC | |||| :| ||| ||||| | UUCCAU-GC-UGAG--GCUGCA- |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-431 | 151 | 170 | ACGUACUGCCGGACGUUCUGU | ||| ||| ||: ||:||| | AGCAGGACUGCU--CAGGACU |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-485 | 65 | 87 | -CUUAAGUAGUGCCGGUCGGAGA | ||:||||| :| |||||||| | CGAGUUCAUAGCAGCCAGCCUG- |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-493 | 83 | 105 | -GACCGUGUGUC-AUCUGGAAGU | ||| ||| || |:||||||| | CCUGCCAC-CAUUUGGACCUUCC |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-494 | 367 | 387 | UCCAAAGGGCA---CAUACAAAGU- | : || ||:||||||| | -----AUUUGUAUAGUGUGUUUCAU |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-499 | 310 | 335 | -UUUGUA--GUGA---CGUUCAGAAUU | |::|| ||| ||:||||| | GAGGCAGCACACGAGAGCGAGUCUG-- |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-540 | 9 | 27 | GGUCCUAGCUGGAGACUGGA | ||||:|| || ||||| | GCAGGGUCU-CCG-UGACCC |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-93 | 250 | 272 | GAUGGACGUGCU-UGUCGUGAAAC | : |||||:| || |||||| | -AGGCUGCAUGCUACCGCACUUA- |
| Cul1; Cul1_predicted; rCG_28370 | rno-let-7c | 240 | 267 | uuGGUAUG--U----UGGAUGAUGGAGU | ||||:| | :| |:||||| || | ttCCATGCTGAGGCTGCATGCTACCGCA |
| Cul1; Cul1_predicted; rCG_28370 | rno-let-7e | 69 | 91 | ugaUAU-GUUGG-AGGAUGGAGu | ||| ||:|| |||:|| | | ttcATAGCAGCCAGCCTGCCACc |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-101b | 141 | 162 | GAAGUCGAUAGUGUCAUGACau | || ||||| :||| |||| | CTCAAGCTACAGCAGGACTGct |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-10a | 1 | 16 | guguuuaagccUAGA-UGUCCCAu | |||| :|||||| | --------cccATCTAGCAGGGTc |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-125a | 141 | 168 | GUGUCCAAUUUC--CC--A-GAGUCCcu | | || | || || || | |||||| | CTCAAGCTACAGCAGGACTGCTCAGGac |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-127 | 208 | 236 | UCGGUUCGA--GUCUG-----CCUAGGCU | | || | || ||||| ||| |||| | ACCCTAACTCACAGACAGAGGGGAACCGA |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-133a | 218 | 236 | UGUC-GACCAACUUCCCC-UGGUU | |||| | | ||||| |||:| | ACAGACAG-----AGGGGAACCGA |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-138 | 117 | 137 | cuaaGUGUU----GUGGUCGA | ||||: |||||||| | agacCACAGTTTCCACCAGCT |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-138 | 66 | 84 | CU-AAGUGUUGU-GGUCGa | || ||||:|:|| ||||| | GAGTTCATAGCAGCCAGCc |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-15b | 236 | 262 | acauuuGGUACUAC----ACG-ACGAU | ||||| || ||| ||||| | aaccttCCATGCTGAGGCTGCATGCTA |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-17 | 248 | 272 | ugaugGACGUGACAU-UCGUGAAac | |||||: || |||||| | tgaggCTGCATGCTACCGCACTTaa |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-181a | 314 | 340 | ugaGUG-GCUGUCG--CA-ACUUACaa | ||| ||| ||| || |||||| | cagCACACGAGAGCGAGTCTGAATGga |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-181b | 315 | 340 | ggGUG-GCUGUCGUU---ACUUACaa | ||| ||| |||:| |||||| | agCACACGAGAGCGAGTCTGAATGga |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-187 | 305 | 323 | GCCGACGUUGUGUUC-UGUGCU | || ||| ::| || |||||| | CGTCTGAGGC---AGCACACGA |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-191 | 432 | 451 | UCGACGAAAACCCUAAGGCAAc | ||:||| ||||| ||::||| | AGTTGCATTTGG--TTTTGTTt |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-204 | 210 | 231 | uccguauccuaCUGUUUCCCUU | ||||:||||:| | cctaactcacaGACAGAGGGGA |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-20a | 249 | 272 | gaugGACGUGAUAU-UCGUGAAau | |||||: || |||||| | gaggCTGCATGCTACCGCACTTaa |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-20b | 251 | 272 | ugGACGU--GAUACUCGUGAAac | ||||| ||| |||||| | ggCTGCATGCTA-CCGCACTTaa |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-20b* | 239 | 259 | gucuucACGAGUGUGACGUca | |||| | :||||| | cttccaTGCTGAGGCTGCAtg |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-211 | 210 | 231 | uccguuuccuaCUGUUUCCCUU | ||||:||||:| | cctaactcacaGACAGAGGGGA |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-212 | 151 | 173 | cCGGCACUGAC---CUCUGACaau | || | ||||| :||||| | aGCAG-GACTGCTCAGGACTGaca |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-24 | 233 | 254 | GACAAGGACGACUUGACUCGGu | | | ||| | :||||| | | CCGAACCTTCCATGCTGAGGCt |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-28 | 273 | 291 | gAGUUAUCUGACACUCGAGGaa | |||||| |:| :||||| | aTCAATACATT---GGCTCCct |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-30a-3p | 252 | 274 | CGACGUUUGUAGGC-UGACUUUc | |||||| :| ||| ||| ||| | GCTGCATGCTACCGCACTTAAAt |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-323 | 323 | 356 | UCUC---CAG------CUG---GCACAUUACACG | |||| ||| ||| |||||||| ||| | AGAGCGAGTCTGAATGGACCCACGTGTAATCTGC |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-324-3p | 297 | 319 | gGUCGUC-GUGGACCCCGUCacc | |||| | |::||| ||||| | aCAGCTGTCGTCTGAGGCAGcac |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-330 | 329 | 361 | agAGACGU-CC-GGG---AC-----ACGAAACg | |||| | || ||| || |||| || | agTCTGAATGGACCCACGTGTAATCTGCTATGa |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-342 | 371 | 403 | cugccCACGC----UAAAG-----ACACACUcu | |||:| ||||: ||||||| | gtataGTGTGTTTCATTTTTTTAATGTGTGAaa |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-343 | 307 | 331 | AGA--CC--CGUGUGC-CUCCCUCu | ||| || ||||||| ||| ||| | TCTGAGGCAGCACACGAGAGCGAGt |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-346 | 148 | 173 | ucucCGUCC--GUGAGUCC-GUCUGU | ||||| ::|||||| | |||| | tacaGCAGGACTGCTCAGGACTGACA |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-349 | 135 | 160 | ucuCCA-A-UUC--UGUCGUCCCGAC | ||| | ||| |||||||| ||| | gctGGTCTCAAGCTACAGCAGGACTG |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-34a | 58 | 89 | UUGUUG-G-UC--G-AU--UCUGU--GACGGU | |||||| | || | || || || |||||| | AACAACTCGAGTTCATAGCAGCCAGCCTGCCA |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-351 | 143 | 168 | GUCCGA-GUU-UCCCGAGGAGUCCcu | || ||| ||: ||| || |||||| | CAAGCTACAGCAGGACTGCTCAGGac |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-370 | 130 | 157 | uUGGU---CCAAGGU--GGGGUCGUCCg | |||| ||| :|| |: ||||||| | cACCAGCTGGTCTCAAGCTACAGCAGGa |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-378 | 149 | 168 | UGU-GUCCUGGACCUCAGUCCUc | ||| ||||| ||| |||||| | ACAGCAGGA-CTGC--TCAGGAc |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-383 | 117 | 142 | UC-GGUGUCA---GUGGAAGACUAGA | || ||||||| |||| |||:||| | AGACCACAGTTTCCACCAGCTGGTCT |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-422b | 14 | 45 | CGGAAG-ACUGAG-----GU---UC-AGGUCA | |:|| | |||| | || || |||||| | GTCTCCGTGACCCACGAGCAGATAGTTCCAGT |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-424 | 241 | 262 | AGGUUUUGUACU-UAACG-ACGAc | ||| | :| ||| : ||| |||| | TCC-ATGC-TGAGGCTGCATGCTa |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-431 | 137 | 159 | acguacugcCG--GACGUUCUGu | || | |||:||| | tggtctcaaGCTACAGCAGGACt |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-485 | 66 | 87 | CUUAAGUAGUGCCGGUCGGAga | ||:||||| :| |||||||| | GAGTTCATAGCAGCCAGCCTgc |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-493 | 84 | 104 | GACCGUGUGU-CAUCUGGAAGu | ||| ||| || |:||||||| | CTGCCAC-CATTTGGACCTTCc |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-494 | 365 | 385 | uccaaagggcaCAUACAAAGU | ||:||||||| | ccatttgtataGTGTGTTTCA |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-499 | 311 | 336 | UUUGUAGUG-----ACGUUCAGAAUU | |::|| ||| ||:||||| || | AGGCAGCACACGAGAGCGAGTCTGAA |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-540 | 6 | 26 | GGUCCUAGCUGGAG--ACUGGa | |:|| | |::||| ||||| | CTAGCA-GGGTCTCCGTGACCc |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-93 | 249 | 272 | gaugGACGUGC-UUGUCGUGAAac | |||||:| || |||||| | gaggCTGCATGCTACCGCACTTaa |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-138 | 130 | 137 | ---------------------CUAA-GUGUU----GUGGUCGA | || ||||: |||||||| | UGGACCUUCCUUUUUAAAGCUGAGACCACAGUUUCCACCAGCUG |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-370 | 150 | 157 | ---UUGGU--CCAAGGUGGG---------------GUCGUCCG | :|||| | ||||||| ||||||| | UGAGACCACAGUUUCCACCAGCUGGUCUCAAGCUACAGCAGGA |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-377 | 395 | 402 | -----GGUUUUCA----ACGGAA------------ACACACUA | ||| || ||: || ||||||| | GAAAACCAUUUGUAUAGUGUGUUUCAUUUUUUUAAUGUGUGAA |
| Cul1; Cul1_predicted; rCG_28370 | rno-miR-493 | 97 | 104 | ----------------------GACCGUGUGUC-AUCUGGAAGU | ||| ||| || |:||||||| | ACUCGAGUUCAUAGCAGCCAGCCUGCCAC-CAUUUGGACCUUCC |