DNA & RNA Element - microRNA |
Mirbase Acc | miRNA Name | Gene ID | Gene Symbol | miRNA Alignment | Alignment | Gene Alignment | miRNA Start | miRNA End | Gene Start | Gene End | Genome Coordinates | Conservation | Align Score | Seed Cat | Energy | mirSVR Score |
MIMAT0004646 | rno-miR-338* | 297930 | Wwp1 | gugaguCGUGGUCCUAUAACAa | ||| || |||| ||| | aaaauuGCA-CA-GAUAGUGUa | 2 | 17 | 50 | 69 | [rn4:5:34238712-34238731:-] | 0.7901 | 120 | 0 | -9.00 | -0.1001 |
MIMAT0004646 | rno-miR-338* | 297930 | Wwp1 | gugagucgugguccuAUAACAa | |||||| | auuuucuacuuuauuUAUUGUu | 2 | 8 | 163 | 184 | [rn4:5:34238597-34238618:-] | 0.7033 | 120 | 6 | -8.38 | -0.1385 |
MIMAT0004705 | rno-let-7b* | 297930 | Wwp1 | cccuuccgucauccaACAUAUc | |||||| | aaauugcacagauagUGUAUAu | 2 | 8 | 51 | 72 | [rn4:5:34238709-34238730:-] | 0.7901 | 120 | 6 | -8.86 | -0.1674 |
MIMAT0004709 | rno-miR-10a-3p | 297930 | Wwp1 | auaaggggaucuaugCUUAAAc | |||||| | uugacgcaaguaagaGAAUUUa | 2 | 8 | 227 | 248 | [rn4:5:34238533-34238554:-] | 0.7033 | 120 | 6 | -5.13 | -0.3350 |
MIMAT0004711 | rno-miR-21* | 297930 | Wwp1 | cugucggguagcugaCGACAAc | |||||| | agauaguguauauaaGCUGUUc | 2 | 8 | 60 | 81 | [rn4:5:34238700-34238721:-] | 0.7901 | 120 | 6 | -16.36 | -0.2523 |
MIMAT0004718 | rno-miR-29a* | 297930 | Wwp1 | gaCUUGUGGUUUUCUUUAGUca | || || |||| |||||| | cuGACCAGGAAAAAAAAUCAuc | 3 | 21 | 197 | 218 | [rn4:5:34238563-34238584:-] | 0.7033 | 148 | 0 | -10.82 | -0.2009 |
MIMAT0004719 | rno-miR-30c-1* | 297930 | Wwp1 | ccUCAUUUGUUGGG---AGAGGGUc | ||| ||: :|: ||||:|| | acAGUUAAUUUUCUGAAUCUCUCAa | 2 | 21 | 89 | 113 | [rn4:5:34238668-34238692:-] | 0.7467 | 131 | 0 | -13.81 | -0.1149 |
MIMAT0005442 | rno-miR-30c-2* | 297930 | Wwp1 | ucUCAUUUGUCGGA---AGAGGGUc | ||| ||: :|| ||||:|| | acAGUUAAUUUUCUGAAUCUCUCAa | 2 | 21 | 89 | 113 | [rn4:5:34238668-34238692:-] | 0.7467 | 135 | 0 | -12.82 | -0.1149 |
MIMAT0004731 | rno-miR-125b* | 297930 | Wwp1 | uccaggguucucggACUGAACa | ||||||| | -----------augUGACUUGu | 2 | 9 | 1 | 11 | [rn4:5:34238770-34238780:-] | 0.8048 | 140 | 7 | -10.86 | -1.1261 |
MIMAT0000847 | rno-miR-142-5p | 297930 | Wwp1 | ucaucacGAAAGAUGAAAUAc | :|||||||||||| | uucaucaUUUUCUACUUUAUu | 2 | 15 | 157 | 177 | [rn4:5:34238604-34238624:-] | 0.7033 | 166 | 7 | -14.05 | -1.2831 |
MIMAT0000902 | rno-miR-300-3p | 297930 | Wwp1 | cuucUCUCGAACGGGAACGUAu | :||| ||:||||||| | ucuuGGAG-GAGCUCUUGCAUu | 2 | 19 | 11 | 31 | [rn4:5:34238750-34238770:-] | 0.7974 | 152 | 7 | -19.51 | -1.3415 |
MIMAT0001547 | rno-miR-450a | 297930 | Wwp1 | guaaucCUUGUGUAGCGUUUUu | ||| |:| :|||||| | uccacaGAA-AUA-UGCAAAAc | 2 | 17 | 135 | 154 | [rn4:5:34238627-34238646:-] | 0.7033 | 132 | 6 | -8.13 | -0.5557 |
MIMAT0003174 | rno-miR-540 | 297930 | Wwp1 | gguccuagcuggaGACUGGa | |||||| | ucccuugaaaugaCUGACCa | 2 | 8 | 184 | 203 | [rn4:5:34238578-34238597:-] | 0.7033 | 120 | 6 | -13.46 | -0.3569 |
MIMAT0003175 | rno-miR-543* | 297930 | Wwp1 | ucuucacguggcgcUUACAAa | |||||| | ucucucaaaguauaAAUGUUu | 2 | 8 | 106 | 126 | [rn4:5:34238655-34238675:-] | 0.7467 | 120 | 6 | -6.49 | -0.1960 |
MIMAT0003195 | rno-miR-376b-5p | 297930 | Wwp1 | auUGGUAUCUUCCU-UAUAGGUg | |::| | ||| | |||||:| | uuAUUA-AAAAGAAUAUAUCUAu | 2 | 21 | 246 | 267 | [rn4:5:34238514-34238535:-] | 0.7033 | 137 | 0 | -8.89 | -0.1109 |
MIMAT0005280 | rno-miR-743b | 297930 | Wwp1 | agauaaguCAUACCACAGAAag | ||: |||||| | ------auGUGACUUGUCUUgg | 3 | 15 | 1 | 16 | [rn4:5:34238765-34238780:-] | 0.8048 | 122 | 0 | -7.06 | -0.1545 |
MIMAT0005281 | rno-miR-871 | 297930 | Wwp1 | acAC-UGGCCGUGGUUAGACUUAu | || || | :| : ||||||| | ucUGUACAGUUAAUUUUCUGAAUc | 2 | 22 | 84 | 107 | [rn4:5:34238674-34238697:-] | 0.7901 | 148 | 7 | -9.96 | -1.3058 |
MIMAT0005289 | rno-miR-881 | 297930 | Wwp1 | agAUAAGUCUUUACGGUGUCaa | | ||| | | |||||| | ugUUUUCCGUUCUUCCACAGaa | 3 | 21 | 122 | 143 | [rn4:5:34238638-34238659:-] | 0.7033 | 132 | 0 | -10.07 | -0.4504 |
MIMAT0005330 | rno-miR-674-3p | 297930 | Wwp1 | aacaagacucuacccUCGACAc | |||||| | cagauaguguauauaAGCUGUu | 2 | 8 | 59 | 80 | [rn4:5:34238701-34238722:-] | 0.7901 | 120 | 6 | -6.88 | -0.1947 |
MIMAT0012831 | rno-miR-544 | 297930 | Wwp1 | cucgaacgaUUUUUACGUCUUa | ||| ||||| || | cuuccacagAAAUAUGCAAAAc | 2 | 14 | 133 | 154 | [rn4:5:34238627-34238648:-] | 0.7033 | 125 | 0 | -4.01 | -0.1151 |
MIMAT0012834 | rno-miR-592 | 297930 | Wwp1 | ugUAGUAGCGUAUAACUGUGUUa | ||| |: || |||||:||| | ucAUCCUUAAAUUUUGACGCAAg | 2 | 22 | 214 | 236 | [rn4:5:34238545-34238567:-] | 0.7033 | 153 | 0 | -16.11 | -0.1892 |
MIMAT0012848 | rno-miR-294 | 297930 | Wwp1 | ucuaucccGGAGGUAAAACUc | |:| ||||||| | aaaucaucCUUAAAUUUUGAc | 2 | 14 | 211 | 231 | [rn4:5:34238550-34238570:-] | 0.7033 | 145 | 7 | -8.69 | -1.1243 |
MIMAT0012850 | rno-miR-465 | 297930 | Wwp1 | guGUGGUCGUGGCAAGAUUUAu | :|| : :| : ||||:||| | ugUACAGUUAAUUUUCUGAAUc | 2 | 21 | 86 | 107 | [rn4:5:34238674-34238695:-] | 0.7901 | 136 | 0 | -9.97 | -0.1330 |
MIMAT0012856 | rno-miR-759 | 297930 | Wwp1 | caguUUUAACAAACGUGAGACg | ||: |||| ||||||| | auauAAGCUGUU--CACUCUGu | 2 | 19 | 69 | 88 | [rn4:5:34238693-34238712:-] | 0.7901 | 155 | 7 | -15.25 | -1.2810 |
MIMAT0000552 | rno-miR-301a | 297930 | Wwp1 | cgaAACUGUUAUGAUAACGUGAc | |||: :: :|| |||||:| | gucUUGGAGGAGCUCUUGCAUUu | 2 | 21 | 10 | 32 | [rn4:5:34238749-34238771:-] | 0.7974 | 144 | 0 | -12.88 | -0.1858 |
MIMAT0000552 | rno-miR-301a | 297930 | Wwp1 | cgaaaCUGUU-AUGAUAACGUGac | | ||| | ||||||| | ccccaGCCAAGAAAAAUUGCACag | 3 | 19 | 38 | 61 | [rn4:5:34238720-34238743:-] | 0.7901 | 129 | 0 | -9.37 | -0.2714 |
MIMAT0000575 | rno-miR-335 | 297930 | Wwp1 | uguAAAAAGCAAUAACGAGAACu | | | |:| : ||||||| | acuUGUCUUGGAGGAGCUCUUGc | 2 | 21 | 6 | 28 | [rn4:5:34238753-34238775:-] | 0.7974 | 144 | 7 | -11.56 | -1.1787 |
MIMAT0004650 | rno-miR-340-5p | 297930 | Wwp1 | uuAGUCAGAGUAACGAAAUAuu | ||| |:|| | |||||| | caUCAUUUUC--UACUUUAUuu | 3 | 21 | 159 | 178 | [rn4:5:34238603-34238622:-] | 0.7033 | 137 | 0 | -9.34 | -0.2803 |
MIMAT0000600 | rno-miR-129 | 297930 | Wwp1 | cguucGGGUCU---GGCGUUUUuc | | |||| :|||||| | ucuucCACAGAAAUAUGCAAAAca | 3 | 17 | 132 | 155 | [rn4:5:34238626-34238649:-] | 0.7033 | 123 | 0 | -14.58 | -0.6220 |
MIMAT0000606 | rno-miR-7a | 297930 | Wwp1 | uguuGUUUUA-GUGAUCAGAAGGu | ||||:| :| ||:|||| | cucuCAAAGUAUAAAUGUUUUCCg | 2 | 20 | 107 | 130 | [rn4:5:34238651-34238674:-] | 0.7467 | 138 | 0 | -15.50 | -0.1559 |
MIMAT0000606 | rno-miR-7a | 297930 | Wwp1 | uguuguuuuagugaucAGAAGGu | |||||| | uauaaauguuuuccguUCUUCCa | 2 | 8 | 116 | 138 | [rn4:5:34238643-34238665:-] | 0.7033 | 120 | 6 | -10.99 | -0.1507 |
MIMAT0000780 | rno-miR-7b | 297930 | Wwp1 | uguuGUUUUA-GUGUUCAGAAGGu | ||||:| :| | ||:|||| | cucuCAAAGUAUAAAUGUUUUCCg | 2 | 20 | 107 | 130 | [rn4:5:34238651-34238674:-] | 0.7467 | 146 | 0 | -16.22 | -0.1559 |
MIMAT0000780 | rno-miR-7b | 297930 | Wwp1 | uguuguuuuaguguucAGAAGGu | |||||| | uauaaauguuuuccguUCUUCCa | 2 | 8 | 116 | 138 | [rn4:5:34238643-34238665:-] | 0.7033 | 120 | 6 | -12.38 | -0.1507 |
MIMAT0000788 | rno-miR-19b | 297930 | Wwp1 | agucaaaacguaccuaAACGUGu | |||||| | ccccagccaagaaaaaUUGCACa | 2 | 8 | 38 | 60 | [rn4:5:34238721-34238743:-] | 0.7901 | 120 | 6 | -9.72 | -0.3229 |
MIMAT0000789 | rno-miR-19a | 297930 | Wwp1 | agucaaaacguaucuaAACGUGu | |||||| | ccccagccaagaaaaaUUGCACa | 2 | 8 | 38 | 60 | [rn4:5:34238721-34238743:-] | 0.7901 | 120 | 6 | -11.85 | -0.3229 |
MIMAT0000790 | rno-miR-21 | 297930 | Wwp1 | aguUGU-AGUCAGA-CUAUUCGAu | ||| :||| | ||||||| | ugcACAGAUAGUGUAUAUAAGCUg | 2 | 20 | 55 | 78 | [rn4:5:34238703-34238726:-] | 0.7901 | 149 | 7 | -14.38 | -1.1623 |
MIMAT0000790 | rno-miR-21 | 297930 | Wwp1 | agUUGUAGUCAGA-CUAUUCGau | ||:|| | ||| |||||| | agAAUAU-A-UCUAUAUAAGCau | 3 | 21 | 255 | 275 | [rn4:5:34238506-34238526:-] | 0.7033 | 131 | 0 | -7.88 | -0.6952 |
MIMAT0000792 | rno-miR-23a | 297930 | Wwp1 | ccuuuagggaccguUACACUa | |||||| | --------------AUGUGAc | 2 | 8 | 1 | 7 | [rn4:5:34238774-34238780:-] | 0.8048 | 120 | 6 | -5.98 | -0.2119 |
MIMAT0000793 | rno-miR-23b | 297930 | Wwp1 | ccauuagggaccguUACACUa | |||||| | --------------AUGUGAc | 2 | 8 | 1 | 7 | [rn4:5:34238774-34238780:-] | 0.8048 | 120 | 6 | -5.83 | -0.2119 |
MIMAT0000804 | rno-miR-30c | 297930 | Wwp1 | cgACUCUCACAUCCUACAAAUGu | | | ||| || |||||| | | ucUCAAAGUAUA-AAUGUUUUCc | 2 | 22 | 108 | 129 | [rn4:5:34238652-34238673:-] | 0.7467 | 127 | 0 | -5.89 | -0.1122 |
MIMAT0000810 | rno-miR-31 | 297930 | Wwp1 | gucgauacggUCGUAGAACGga | ||| |||||| | gucuuggaggAGC-UCUUGCau | 3 | 13 | 10 | 30 | [rn4:5:34238751-34238771:-] | 0.7974 | 126 | 0 | -13.29 | -0.4549 |
MIMAT0000836 | rno-miR-130a | 297930 | Wwp1 | uacgggaaaaUUGUAACGUGac | || ||||||| | ccagccaagaAAAAUUGCACag | 3 | 13 | 40 | 61 | [rn4:5:34238720-34238741:-] | 0.7901 | 132 | 0 | -13.64 | -0.2834 |
MIMAT0000836 | rno-miR-130a | 297930 | Wwp1 | uacgggaaaauuguAACGUGAc | |||||:| | ucuuggaggagcucUUGCAUUu | 2 | 9 | 11 | 32 | [rn4:5:34238749-34238770:-] | 0.7974 | 124 | 0 | -9.47 | -0.1858 |
MIMAT0000837 | rno-miR-130b | 297930 | Wwp1 | uacgggaaaguAGUAACGUGAc | || |||||:| | cuuggaggagcUC-UUGCAUUu | 2 | 12 | 12 | 32 | [rn4:5:34238749-34238769:-] | 0.7974 | 125 | 0 | -9.63 | -0.1744 |
MIMAT0000837 | rno-miR-130b | 297930 | Wwp1 | uacgggaaaguagUAACGUGac | ||||||| | ccagccaagaaaaAUUGCACag | 3 | 10 | 40 | 61 | [rn4:5:34238720-34238741:-] | 0.7901 | 125 | 0 | -13.64 | -0.2834 |
MIMAT0000844 | rno-miR-138 | 297930 | Wwp1 | gccGGAC-UAAGUGU-UGUGGUCGa | |:|| |||:| | || ||||| | gcuCUUGCAUUUAAAUACCCCAGCc | 2 | 21 | 21 | 45 | [rn4:5:34238736-34238760:-] | 0.7901 | 134 | 0 | -17.10 | -0.1518 |
MIMAT0000855 | rno-miR-153 | 297930 | Wwp1 | cuagugaaaacacugAUACGUu | |||||| | guucuuccacagaaaUAUGCAa | 2 | 8 | 130 | 151 | [rn4:5:34238630-34238651:-] | 0.7033 | 120 | 6 | -10.88 | -0.4024 |
MIMAT0000862 | rno-miR-185 | 297930 | Wwp1 | aguccUUGACGGA--AAGAGAGgu | ||:| :|| |||||| | caguuAAUUUUCUGAAUCUCUCaa | 3 | 18 | 90 | 113 | [rn4:5:34238668-34238691:-] | 0.7467 | 128 | 0 | -14.98 | -0.5080 |
MIMAT0000865 | rno-miR-190 | 297930 | Wwp1 | ugGAUUAUAUAGUUUGUAUAGu | :|| || | :||:||||| | auUUAUUAAAAAGAAUAUAUCu | 2 | 21 | 244 | 265 | [rn4:5:34238516-34238537:-] | 0.7033 | 144 | 0 | -8.16 | -0.2150 |
MIMAT0000866 | rno-miR-191 | 297930 | Wwp1 | gucgacgaaaacccuAAGGCAAc | ||||||| | caaaguauaaauguuUUCCGUUc | 2 | 9 | 111 | 133 | [rn4:5:34238648-34238670:-] | 0.7033 | 140 | 7 | -8.69 | -1.2398 |
MIMAT0000876 | rno-miR-203 | 297930 | Wwp1 | gaucaccAGGAUUUGUAAAGUg | | | |||||||||| | agaaauaUGCAAAACAUUUCAu | 2 | 16 | 140 | 161 | [rn4:5:34238620-34238641:-] | 0.7033 | 159 | 7 | -11.61 | -1.2816 |
MIMAT0000879 | rno-miR-206 | 297930 | Wwp1 | ggUGUGUGAAGGAAUGUAAGGu | | |:| | | |||||:| | agAAAUA-UGCAAAACAUUUCa | 2 | 21 | 140 | 160 | [rn4:5:34238621-34238641:-] | 0.7033 | 126 | 0 | -9.15 | -0.1995 |
MIMAT0000892 | rno-miR-223 | 297930 | Wwp1 | ccccauaAACUGU-UUGACUGu | |||| | :|||||| | uguucccUUGAAAUGACUGACc | 2 | 15 | 181 | 202 | [rn4:5:34238579-34238600:-] | 0.7033 | 137 | 6 | -11.23 | -0.3287 |
MIMAT0001534 | rno-miR-448 | 297930 | Wwp1 | uacccuguaggaUGUAUACGUu | | ||||||| | guucuuccacagAAAUAUGCAa | 2 | 11 | 130 | 151 | [rn4:5:34238630-34238651:-] | 0.7033 | 142 | 7 | -11.18 | -1.3070 |
MIMAT0001534 | rno-miR-448 | 297930 | Wwp1 | uacCCUGUA-GGAUGUAUACGUu | | |:|| :|||:||| ||| | aaaGAAUAUAUCUAUAUAAGCAu | 2 | 20 | 253 | 275 | [rn4:5:34238506-34238528:-] | 0.7033 | 134 | 0 | -11.56 | -0.2973 |
MIMAT0003114 | rno-miR-383 | 297930 | Wwp1 | ucgGUGUCAG-UGGAAGAC-UAGa | :|||||: |::||||| ||| | cugUACAGUUAAUUUUCUGAAUCu | 2 | 20 | 85 | 108 | [rn4:5:34238673-34238696:-] | 0.7901 | 134 | 0 | -21.65 | -1.2981 |
MIMAT0003119 | rno-miR-224 | 297930 | Wwp1 | auuugccuuggugauCACUGAAc | ||||||| | -------------auGUGACUUg | 2 | 9 | 1 | 10 | [rn4:5:34238771-34238780:-] | 0.8048 | 140 | 7 | -13.96 | -1.0870 |
MIMAT0003125 | rno-miR-1 | 297930 | Wwp1 | uaUGUGUGAAGAAAUGUAAGGu | | |:| | | |||||:| | agAAAUA-UGCAAAACAUUUCa | 2 | 21 | 140 | 160 | [rn4:5:34238621-34238641:-] | 0.7033 | 126 | 0 | -9.98 | -0.1995 |
MIMAT0003179 | rno-miR-542-3p | 297930 | Wwp1 | aaaGUCA-AUA-GUUAGAC-AGUGu | :||| ||| :|| ||| |||| | agaUAGUGUAUAUAAGCUGUUCACu | 2 | 20 | 60 | 84 | [rn4:5:34238697-34238721:-] | 0.7901 | 125 | 0 | -11.91 | -1.1099 |
MIMAT0003193 | rno-miR-494 | 297930 | Wwp1 | uccaaagggcacaUACAAAGu | ||||||: | ucucaaaguauaaAUGUUUUc | 2 | 9 | 108 | 128 | [rn4:5:34238653-34238673:-] | 0.7467 | 124 | 0 | -5.35 | -0.1800 |
MIMAT0005302 | rno-miR-190b | 297930 | Wwp1 | uugGAUUAUAGUUUGUAUAGu | :||| | :||:||||| | uuaUUAA-AAAGAAUAUAUCu | 2 | 19 | 246 | 265 | [rn4:5:34238516-34238535:-] | 0.7033 | 136 | 0 | -8.03 | -0.2130 |
MIMAT0005304 | rno-miR-301b | 297930 | Wwp1 | cgaAACUGUUAUGGUAACGUGAc | |||: :: :|: |||||:| | gucUUGGAGGAGCUCUUGCAUUu | 2 | 21 | 10 | 32 | [rn4:5:34238749-34238771:-] | 0.7974 | 140 | 0 | -12.02 | -0.1858 |
MIMAT0005304 | rno-miR-301b | 297930 | Wwp1 | cgaaaCUGUU-AUGGUAACGUGac | | ||| | ||||||| | ccccaGCCAAGAAAAAUUGCACag | 3 | 19 | 38 | 61 | [rn4:5:34238720-34238743:-] | 0.7901 | 129 | 0 | -10.47 | -0.2714 |
MIMAT0005312 | rno-miR-411 | 297930 | Wwp1 | gcaugcgauaugccAGAUGAu | |||||| | acauuucaucauuuUCUACUu | 2 | 8 | 153 | 173 | [rn4:5:34238608-34238628:-] | 0.7033 | 120 | 6 | -8.75 | -0.5148 |