DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000577 rno-miR-337 60383 Rbck1 uuuccguaguauaucCUCGACUu ||||||| uacaagaacccagcuGAGCUGAu 2 9 154 176 [rn4:3:142644489-142644511:-] 0.5218 140 7 -11.07 -0.1953 MIMAT0000601 rno-miR-129* 60383 Rbck1 uacGA-AAAACCCCAUUCCCGAa || | ||| ||||||| ugcCUCUGUUGCUUCAAGGGCUu 2 20 188 210 [rn4:3:142644455-142644477:-] 0.5218 146 7 -14.24 -0.1022 MIMAT0004710 rno-miR-17-3p 60383 Rbck1 ggUGUUCAC-GGAAGUGACGUCa | :| || || :||||||| gaAAGACUGAGCUGUACUGCAGu 2 21 118 140 [rn4:3:142644525-142644547:-] 0.5218 151 7 -17.35 -0.3423 MIMAT0004732 rno-miR-135a* 60383 Rbck1 aaaGUAC-CGAAGGUAGGGAUGu | || ||| | ||||||| ggcCCUGAGCUAGCUUCCCUACc 2 20 227 249 [rn4:3:142644416-142644438:-] 0.5218 154 7 -15.82 -0.3238 MIMAT0003212 rno-miR-20b-3p 60383 Rbck1 ggUCU-UCACGAGUGUGACGUCa ||| | ||| ::||||||| aaAGACUGAGCU-GUACUGCAGu 2 21 119 140 [rn4:3:142644525-142644546:-] 0.5218 153 7 -19.12 -0.3395 MIMAT0003378 rno-miR-378* 60383 Rbck1 uguGUCC--UGGACC--UCAGUCCUc |||| : |||| :||||||| gccCAGGUAGACUGGUAGGUCAGGAa 2 20 422 447 [rn4:3:142644218-142644243:-] 0.5218 153 7 -25.55 -0.2177 MIMAT0005297 rno-miR-147 60383 Rbck1 aucgucuucguaaaGGCGUGUg ||||||| ucagacugacccagCCGCACAu 2 9 18 39 [rn4:3:142644626-142644647:-] 0.5413 140 7 -18.81 -0.2199 MIMAT0005330 rno-miR-674-3p 60383 Rbck1 aacaagaCUCUACC---CUCGACAc |||| | ||||||| gguaaggGAGAAAGACUGAGCUGUa 2 16 109 133 [rn4:3:142644532-142644556:-] 0.5218 142 7 -13.85 -0.6821 MIMAT0005333 rno-miR-742 60383 Rbck1 aaauggguuGUACCACCGAAAg | || ||||||| aucuguugcCUUGCUGGCUUUc 2 14 364 385 [rn4:3:142644280-142644301:-] 0.5218 149 7 -17.83 -0.1213 MIMAT0000794 rno-miR-24 60383 Rbck1 gacaagGACGACUUGACUCGGu || || ||||||| uggcggCUAGUGCUCUGAGCCu 2 17 292 313 [rn4:3:142644352-142644373:-] 0.5218 148 7 -16.62 -0.1836 MIMAT0000800 rno-miR-28 60383 Rbck1 gaguuAUC-UGACACUC-GAGGAa ||| :|| |||| ||||| gcggcUAGUGCUCUGAGCCUCCUg 2 18 294 317 [rn4:3:142644348-142644371:-] 0.5218 128 0 -19.35 -0.2351 MIMAT0000808 rno-miR-30a 60383 Rbck1 gaAGGUCAG-CU-CCUACA-AAUGu | ||||| || | ||| |||| acUGCAGUCUGAUUGCUGUGUUACa 2 21 133 157 [rn4:3:142644508-142644532:-] 0.5218 122 0 -15.34 -0.4813 MIMAT0000844 rno-miR-138 60383 Rbck1 gccGGACUAAGUGUUGUGGUCGa ||| | | :| ||||||| uacCCUUACUAGC--CACCAGCc 2 21 246 266 [rn4:3:142644399-142644419:-] 0.5218 149 7 -15.87 -0.3679 MIMAT0000845 rno-miR-139-5p 60383 Rbck1 gaCCUCUGUGCACGUGA-CAUCu ||: || || ||| |||| caGGGCCCAGGUAGACUGGUAGg 2 21 418 440 [rn4:3:142644225-142644247:-] 0.5218 120 0 -16.77 -0.1317 MIMAT0000890 rno-miR-221 60383 Rbck1 cuUUGGGUCG--UCUGUUACA-UCGa |||||||| || ::|||| ||| agAACCCAGCUGAGCUGAUGUCAGCc 2 22 158 183 [rn4:3:142644482-142644507:-] 0.5218 140 0 -24.48 -0.1770 MIMAT0000891 rno-miR-222 60383 Rbck1 ugGGUC-A-UCGGUCUACA-UCGa |||| | |||: ||||| ||| acCCAGCUGAGCU-GAUGUCAGCc 2 20 161 183 [rn4:3:142644482-142644504:-] 0.5218 123 0 -24.41 -0.1803 MIMAT0005331 rno-miR-708 60383 Rbck1 ggGUCGAUC-UAACAUUC-GAGGAa |:||||| : | |:|| ||||| ggCGGCUAGUGCUCUGAGCCUCCUg 2 22 293 317 [rn4:3:142644348-142644372:-] 0.5218 132 0 -21.82 -0.2351

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G043638 Rbck1 Rattus norvegicus 60383

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Rbck1 RAID00229404 rno-miR-1188-3p miRNA MIMAT0017855 Rbck1 mRNA 60383 Prediction 0.1828 Rbck1 RAID00277865 rno-miR-3084a-5p miRNA MIMAT0035739 Rbck1 mRNA 60383 Prediction 0.1828 Rbck1 RAID00657722 rno-miR-708-5p miRNA MIMAT0005331 Rbck1 mRNA 60383 Prediction 0.1828 Rbck1 RAID00727608 rno-miR-221-3p miRNA MIMAT0000890 Rbck1 mRNA 60383 Prediction 0.1828 Rbck1 RAID01066998 rno-miR-222-3p miRNA MIMAT0000891 Rbck1 mRNA 60383 Prediction 0.1828 Rbck1 RAID01972893 rno-miR-6333 miRNA MIMAT0025074 Rbck1 mRNA 60383 Prediction 0.1828 Rbck1 RAID02542935 rno-miR-3120 miRNA MIMAT0017900 Rbck1 mRNA 60383 Prediction 0.1828 Rbck1 RAID02621348 rno-miR-383-3p miRNA MIMAT0017197 Rbck1 mRNA 60383 Prediction 0.1828 Rbck1 RAID03205723 rno-miR-138-5p miRNA MIMAT0000844 Rbck1 mRNA 60383 Prediction 0.1828 Rbck1 RAID03328373 rno-miR-24-3p miRNA MIMAT0000794 Rbck1 mRNA 60383 Prediction 0.1828 Rbck1 RAID03541076 rno-miR-139-5p miRNA MIMAT0000845 Rbck1 mRNA 60383 Prediction 0.1828 Rbck1 RAID03885808 rno-miR-28-5p miRNA MIMAT0000800 Rbck1 mRNA 60383 Prediction 0.1828 Rbck1 RAID04000384 rno-miR-30a-5p miRNA MIMAT0000808 Rbck1 mRNA 60383 Prediction 0.1828