DNA & RNA Element - miRNAMap |
Gene Name | Mature miRNA | Target Start | Target End | miRNA 3-5 | Alignment | Target 5-3 |
Xiap; Api3; Birc4 | rno-miR-106b | 35 | 70 | UAGACGUG------------ACAGUCG--UGAAAU- | ||||| ||| ||| |||||| | -ACUGCAAUUGAAUGUGUGAUGUGAGCGAACUUUAA |
Xiap; Api3; Birc4 | rno-miR-10a | 341 | 371 | GUGUUUAAGCCU----AGA------UGUCCCAU | |||| |||| ||| :||||| | AACAAG--CGGAGUGUUCUGUAUAAGCAGGGA- |
Xiap; Api3; Birc4 | rno-miR-127 | 136 | 165 | -UCGGUUCGAGUCU-----GCCUAGGCU- | :||:|| ||: || :|||||:|| | AGGCUAAUCUUCGAAUUUCUGGAUCUGAA |
Xiap; Api3; Birc4 | rno-miR-128b | 419 | 447 | -CUUUCUCUGGCCAA--GUGACA---CU- | |||||| ||:| ||||| || | GGAAAGA-ACUGUUCCACACUGGUUGGAG |
Xiap; Api3; Birc4 | rno-miR-134 | 286 | 311 | -GGGAGAC---CAGUUGGUCAGUGU | || | || || ||: |||||| | UCCGUGUGUAAGUGAAUGAGUCACC |
Xiap; Api3; Birc4 | rno-miR-150 | 434 | 449 | -GUGACCAUGUUCCCAACCCUCU | ||||||| :||| | ACACUGGUUGGAGGA-------- |
Xiap; Api3; Birc4 | rno-miR-152 | 594 | 618 | GGGUUCAAGACA----GUACGUGACU- | ||| ||| ||||:||||| | ACCA---UCUAACUAGCAUGUACUGAC |
Xiap; Api3; Birc4 | rno-miR-17 | 34 | 69 | -UGAUGG------ACGUG--ACAUUCG--UGAAAC | |||:| ||: |||:||| ||||| | UACUGCAAUUGAAUGUGUGAUGUGAGCGAACUUUA |
Xiap; Api3; Birc4 | rno-miR-181b | 272 | 305 | GGGUGGCUGU-CG------------UUACUUACAA | |||:||| |: |:|||||| | -ACACUGACUUGUUUUCCGUGUGUAAGUGAAUGA- |
Xiap; Api3; Birc4 | rno-miR-181c | 31 | 51 | UGAGUGGCUGUCCAACUUACAA | ||:||:| || |||||||| | UCUUACUG-CAA-UUGAAUGUG |
Xiap; Api3; Birc4 | rno-miR-187 | 4 | 23 | GCCGACGUUGUGU--UCUGUGCU | ||| |||| ||:||:| | ----AGCACCACAGUAGGCAUGU |
Xiap; Api3; Birc4 | rno-miR-189 | 2 | 22 | UGACUAUAGUCGA---GUCAUCCGUG- | |||| |||||||||: | -------CCAGCACCACAGUAGGCAUG |
Xiap; Api3; Birc4 | rno-miR-191 | 474 | 496 | UCGACG-AAAACCCUAAGGCAAC | |||: |||| ||||||:||| | -UCUGUGUUUUAGGAUUCUGUUC |
Xiap; Api3; Birc4 | rno-miR-199a | 413 | 442 | CUUGUCCA--UCA-GACU---UGUGACCC | |||||| || ||| ||||||| | AAACAGGGAAAGAACUGUUCCACACUGGU |
Xiap; Api3; Birc4 | rno-miR-19b | 185 | 218 | AGUCAAAAC-GUA-------CCUAAAC-GUGU- | | ||||| ||| ||:|||| |||: | GCUGUUUUACCAUUUAUCCAGGGUUUGACACGU |
Xiap; Api3; Birc4 | rno-miR-221 | 219 | 241 | -CUUUGGGUCGUCUGUUACAUCGA | ||||||: :|||||| | ||| | AGAAACCU--UAGACAAAGAAGCA |
Xiap; Api3; Birc4 | rno-miR-26a | 488 | 523 | CGGAUAGGA--------CCUA-----AUGAACUU- | :||:|:| |||| ||||||:: | UUCUGUUCAUUUACUUGGGAUUUAUUUACUUGGGA |
Xiap; Api3; Birc4 | rno-miR-26b | 488 | 508 | UUGGAUAGGACUUAAUGAACUU- | :||:|:| |||||||:: | -UUCUGUUCAU--UUACUUGGGA |
Xiap; Api3; Birc4 | rno-miR-290 | 418 | 448 | -UUUUUC---ACGGGG-GU-AUCAAACUC- | ::|||| ||::|| || |:||| ||| | GGGAAAGAACUGUUCCACACUGGUUGGAGG |
Xiap; Api3; Birc4 | rno-miR-298 | 81 | 103 | CCUUCUUGUCGGG-AGG---AGACGG- | :|||:|| |: |||||: | -----CGCAGUCCAUUAGCAUCUGCUC |
Xiap; Api3; Birc4 | rno-miR-323 | 41 | 59 | UCUCCAGCUGGCACAUUACACG | |:|| ||||:||||| | ----AUUGAAUGUGUGAUGUGA |
Xiap; Api3; Birc4 | rno-miR-337 | 135 | 166 | UUUCCGU-----AGUAUAU---CCUCGACUU- | |||| ||: || ||| ||||| | -CAGGCUAAUCUUCGAAUUUCUGGAUCUGAAU |
Xiap; Api3; Birc4 | rno-miR-339 | 348 | 372 | ACUCG-AGGACCUCC-UGUCCCU- | |||: |:||| :|||||| | GGAGUGUUCUGUAUAAGCAGGGAG |
Xiap; Api3; Birc4 | rno-miR-344 | 133 | 162 | UGCCAGUCCGAAACC---------GAUCUAGU | ||||||| ||:|||| | ---UUCAGGCUAAUCUUCGAAUUUCUGGAUCU |
Xiap; Api3; Birc4 | rno-miR-349 | 347 | 371 | -UCUC-CAAUUCUG--UCGUCCCGAC | :||| ||| | ||||||| | CGGAGUGUUCUGUAUAAGCAGGGA-- |
Xiap; Api3; Birc4 | rno-miR-34a | 111 | 135 | -UUGUUGGUCGAUUC-UGUGACGGU | ||||| |:||| :|||||:: | AAACAAAU-GUUAACAGCACUGUUU |
Xiap; Api3; Birc4 | rno-miR-370 | 1 | 20 | UUGGUCCAAGGUGGGGUCGUCCG- | |||| |||| |||:|||| | -UCCAG----CACCACAGUAGGCA |
Xiap; Api3; Birc4 | rno-miR-376a* | 366 | 390 | GAGUAUCUUCCU--CU----UAGAUGG- | :|:||| || ||||:|| | ----AGGGAGGUUUGAUUUAAUCUGCCC |
Xiap; Api3; Birc4 | rno-miR-377 | 36 | 56 | GGUUUUCAACGGAA----ACACACUA- | ||| |||||||| | -------CUGCAAUUGAAUGUGUGAUG |
Xiap; Api3; Birc4 | rno-miR-382* | 288 | 306 | UUCACAACAGGCACUUACUAA | ||| ||| |||||||| | -CGUG-UGUAAGUGAAUGAG- |
Xiap; Api3; Birc4 | rno-miR-383 | 75 | 104 | -UCG--GUGUCAG-----UGGAAGACUAGA | ||| |:||||| :| |||| || | CAGCAUCGCAGUCCAUUAGCA-UCUGCUCC |
Xiap; Api3; Birc4 | rno-miR-7 | 272 | 291 | UUGUUUUAGUGAU----CAGAAGGU- | ||||: ||:||||: | -------ACACUGACUUGUUUUCCGU |
Xiap; Api3; Birc4 | rno-miR-93 | 94 | 132 | GAUGGACGUG---CU---------------UGUCGUGAAAC | |:|||| || |||||||| | -CAUCUGCUCCCAGAUGGAAACAAAUGUUAACAGCACUG-- |
Xiap; Api3; Birc4 | rno-miR-106b | 46 | 68 | UAGACGUGACAGUCG--UGAAAU | || ||:: ||| ||| |||||| | ATGTGTGATGTGAGCGAACTTTA |
Xiap; Api3; Birc4 | rno-miR-10a | 341 | 371 | gUGUUUAAGCCU----AGA------UGUCCCau | ||||: |||| ||| :||||| | aACAAG--CGGAGTGTTCTGTATAAGCAGGGag |
Xiap; Api3; Birc4 | rno-miR-127 | 137 | 163 | uCGGUUCGAGUCU-----GCCUAGGCU | ||:|| ||: || :|||||:|| | gGCTAATCTTCGAATTTCTGGATCTGA |
Xiap; Api3; Birc4 | rno-miR-128b | 420 | 442 | CUUUCUCUGGCCA--AGUGACacu | |||||| ||:| | ||||| | GAAAGA-ACTGTTCCACACTGgtt |
Xiap; Api3; Birc4 | rno-miR-134 | 287 | 310 | GGGAGAC---CAGUUGGUCAGUGu | || | || || ||: |||||| | CCGTGTGTAAGTGAATGAGTCACc |
Xiap; Api3; Birc4 | rno-miR-150 | 425 | 448 | gUGACCA--UGUUCCCAACCCUCU | |||| | ||| |||||| :|| | aACTGTTCCACACTGGTTGGAGGA |
Xiap; Api3; Birc4 | rno-miR-17 | 43 | 68 | ugaUGGACGUGACAUUCG--UGAAAc | |: ||:: |||:||| ||||| | tgaATGTGTGATGTGAGCGAACTTTa |
Xiap; Api3; Birc4 | rno-miR-181a | 31 | 50 | uGAGUGGCUGUCGCAACUUACAa | ||:||:| || |||||||| | tCTTACTG-CA--ATTGAATGTg |
Xiap; Api3; Birc4 | rno-miR-181b | 28 | 50 | gGGUGGCUGUCGUU-ACUUACAa | |: |: || |||| ||||||| | tCTTCTTACTGCAATTGAATGTg |
Xiap; Api3; Birc4 | rno-miR-181b | 283 | 305 | ggguGGCUGUCGUU-ACUUACaa | ||| |:|| |||||| | ttttCCGTGTGTAAGTGAATGag |
Xiap; Api3; Birc4 | rno-miR-181c | 31 | 50 | uGAGUGGCUGUCCAACUUACAa | ||:||:| || |||||||| | tCTTACTG-CA-ATTGAATGTg |
Xiap; Api3; Birc4 | rno-miR-187 | 1 | 22 | gccGACGUUGUGU--UCUGUGCu | | ||| |||| ||:||:| | -tcCAGCACCACAGTAGGCATGt |
Xiap; Api3; Birc4 | rno-miR-189 | 1 | 20 | ugacuaUAGUCGAGUCAUCCGUg | | || | ||||||||| | ---tccAGCACCACAGTAGGCAt |
Xiap; Api3; Birc4 | rno-miR-191 | 473 | 495 | ucGACG-AAAACCCUAAGGCAAc | |||: |||| ||||||:||| | ttCTGTGTTTTAGGATTCTGTTc |
Xiap; Api3; Birc4 | rno-miR-199a | 413 | 441 | cUUGUCC--AUC-AGAC---UUGUGACCc | |||||| || ||| ||||||| | aAACAGGGAAAGAACTGTTCCACACTGGt |
Xiap; Api3; Birc4 | rno-miR-19b | 194 | 216 | aGUCAAAACGUACCUAAAC-GUGu | || || | || ||:|||| ||| | cCATTTATCCA-GGGTTTGACACg |
Xiap; Api3; Birc4 | rno-miR-221 | 220 | 240 | CUUUGGGUCGUCUGUUACAUCGa | ||||||: :|||||| | ||| | GAAACCT--TAGACAAAGAAGCa |
Xiap; Api3; Birc4 | rno-miR-26a | 483 | 506 | cggaUAGGAC--CU-AAUGAACuu | ||:||| | ||||||| | taggATTCTGTTCATTTACTTGgg |
Xiap; Api3; Birc4 | rno-miR-26b | 482 | 506 | uuggaUAGGAC---UUAAUGAACuu | ||:||| | ||||||| | ttaggATTCTGTTCATTTACTTGgg |
Xiap; Api3; Birc4 | rno-miR-290 | 422 | 446 | UUUUUCACGGGG-GU-AUCAAACUC | ||:|| ||::|| || |:||| ||| | AAGAACTGTTCCACACTGGTTGGAG |
Xiap; Api3; Birc4 | rno-miR-298 | 76 | 101 | cCUUCUUGUCGGG--A--GGAGACGg | | | :|||:|| | | ||||| | aGCATCGCAGTCCATTAGCATCTGCt |
Xiap; Api3; Birc4 | rno-miR-323 | 37 | 58 | ucuccAGCUGGCACAUUACACg | |:|| :||||:||||| | tgcaaTTGAATGTGTGATGTGa |
Xiap; Api3; Birc4 | rno-miR-337 | 134 | 164 | uuUCCG--UAG-----UAUA-UCCUCGACUU | |||| ||| || | ||| ||||| | tcAGGCTAATCTTCGAATTTCTGGATCTGAA |
Xiap; Api3; Birc4 | rno-miR-344 | 128 | 161 | UGCC--AGUCCGA----AACC-----GAUCUAGu | || | ||||||| || | ||:|||| | ACTGTTTCAGGCTAATCTTCGAATTTCTGGATCt |
Xiap; Api3; Birc4 | rno-miR-349 | 348 | 372 | uCUC-CAAUUC-UG-UCGUCCCgac | ||| ||| | |: ||||||| | gGAGTGTTCTGTATAAGCAGGGagg |
Xiap; Api3; Birc4 | rno-miR-34a | 112 | 134 | UUGUUGGUCGAUUCU-GUGACggu | ||||| : |:||| | ||||| | AACAAAT-GTTAACAGCACTGttt |
Xiap; Api3; Birc4 | rno-miR-376a* | 363 | 388 | gaGUAUCUUC---CU--CUUAGAUGG | || :||:| || |||||:|| | agCAGGGAGGTTTGATTTAATCTGCC |
Xiap; Api3; Birc4 | rno-miR-382* | 287 | 306 | uuCACAACAGGCACUUACUaa | ||| ||| |||||||| | ccGTG-TGTAAGTGAATGAgt |
Xiap; Api3; Birc4 | rno-miR-383 | 76 | 103 | UCG--GUGUCAG----UGGAAGACUAGa | ||| |:||||| | | |||| || | AGCATCGCAGTCCATTAGCATCTGCTCc |
Xiap; Api3; Birc4 | rno-miR-541 | 69 | 91 | aCACUGGUUGUAGUCUUAGGGAA | || |:||:||||: |:||| || | aGTAATCAGCATCGCAGTCCATT |
Xiap; Api3; Birc4 | rno-miR-7 | 269 | 289 | UUGUUUUAGUGAUCAGAAGGu | |::| | | ||| ||:|||| | AGTACACTGACTTGTTTTCCg |
Xiap; Api3; Birc4 | rno-miR-93 | 111 | 133 | gauggacgugcUUGUCGUGAAAc | ||||||||| | | aaacaaatgttAACAGCACTGTt |
Xiap; Api3; Birc4 | rno-miR-181a | 43 | 50 | U-----------------------GAGUGGCUGUCGCAACUUACAA | ||:||:| || |||||||| | CCACAGUAGGCAUGUUAUGUUCUUCUUACUG-CAA--UUGAAUGUG |
Xiap; Api3; Birc4 | rno-miR-181b | 43 | 50 | GGGUGG---CUGU------------------CGUU-ACUUACAA | |||| |:|| |||| ||||||| | -CCACAGUAGGCAUGUUAUGUUCUUCUUACUGCAAUUGAAUGUG |
Xiap; Api3; Birc4 | rno-miR-181c | 43 | 50 | U-----------------------GAGUGGCUGUCCAACUUACAA | ||:||:| || |||||||| | CCACAGUAGGCAUGUUAUGUUCUUCUUACUG-CAA-UUGAAUGUG |
Xiap; Api3; Birc4 | rno-miR-199a | 434 | 441 | C--------------UUGUCCA--UCA-GACU---UGUGACCC | |||||| || ||| ||||||| | AAUUUGCUUAUUGUAAACAGGGAAAGAACUGUUCCACACUGGU |
Xiap; Api3; Birc4 | rno-miR-377 | 47 | 54 | GGUUUUCA-----------------ACGGAA----ACACACUA | ||| |||||||| | AGUAGGCAUGUUAUGUUCUUCUUACUGCAAUUGAAUGUGUGAUG |