DNA & RNA Element - microRNA |
Mirbase Acc | miRNA Name | Gene ID | Gene Symbol | miRNA Alignment | Alignment | Gene Alignment | miRNA Start | miRNA End | Gene Start | Gene End | Genome Coordinates | Conservation | Align Score | Seed Cat | Energy | mirSVR Score |
MIMAT0004654 | rno-miR-344-5p | 303596 | Rnf190 | ggacCUUAGAUCGGUCCUCGG-ACu | ||:|| ||: |||||| || | cccuGAGUCGAGU--GGAGCCAUGc | 2 | 21 | 303 | 325 | [rn4:10:94762816-94762838:-] | 0.6595 | 125 | 0 | -24.00 | -0.4615 |
MIMAT0004719 | rno-miR-30c-1* | 303596 | Rnf190 | ccUCAUUUG-UUGG---GAGAGGGuc | ||||||| :||: :|||||| | ucAGUAAACUGACUUUAUUCUCCC-- | 3 | 21 | 328 | 351 | [rn4:10:94762790-94762813:-] | 0.6595 | 142 | 0 | -20.04 | -0.1898 |
MIMAT0004720 | rno-miR-30e* | 303596 | Rnf190 | cgacauuuGUAG-GCUGACUUUc | | || : ||||||| | ucuucccuCCUCUUUACUGAAAc | 2 | 15 | 76 | 98 | [rn4:10:94763043-94763065:-] | 0.6657 | 141 | 7 | -7.01 | -0.9923 |
MIMAT0004722 | rno-miR-30d* | 303596 | Rnf190 | cgucguuuGUAG-ACUGACUUUc | | || | ||||||| | ucuucccuCCUCUUUACUGAAAc | 2 | 15 | 76 | 98 | [rn4:10:94763043-94763065:-] | 0.6657 | 145 | 7 | -8.41 | -0.9923 |
MIMAT0000809 | rno-miR-30a* | 303596 | Rnf190 | cgacguuuGUAG-GCUGACUUUc | | || : ||||||| | ucuucccuCCUCUUUACUGAAAc | 2 | 15 | 76 | 98 | [rn4:10:94763043-94763065:-] | 0.6657 | 141 | 7 | -7.17 | -0.9923 |
MIMAT0005442 | rno-miR-30c-2* | 303596 | Rnf190 | ucUCAUUUGUCGG----AAGAGGGuc | ||||||| | | ||||||| | ucAGUAAACUGACUUUAUUCUCCC-- | 3 | 21 | 328 | 351 | [rn4:10:94762790-94762813:-] | 0.6595 | 143 | 0 | -18.40 | -0.1898 |
MIMAT0000847 | rno-miR-142-5p | 303596 | Rnf190 | ucaucacgaaaGA-UGAAAUAc | || ||||||| | cauucaguaaaCUGACUUUAUu | 2 | 11 | 325 | 346 | [rn4:10:94762795-94762816:-] | 0.6595 | 141 | 7 | -9.31 | -0.5303 |
MIMAT0004739 | rno-miR-204* | 303596 | Rnf190 | uugcagggaaacGGAAGGGUCg | ||||||||| | cagccacagggaCCUUCCCAGc | 2 | 11 | 174 | 195 | [rn4:10:94762946-94762967:-] | 0.6657 | 150 | 7 | -24.36 | -0.1028 |
MIMAT0003191 | rno-miR-493 | 303596 | Rnf190 | gaCCGU--GUGUCAUCUGGAAGu | |||| ||||| :||||||| | ugGGCAGCCACAG-GGACCUUCc | 2 | 20 | 170 | 191 | [rn4:10:94762950-94762971:-] | 0.6657 | 164 | 7 | -26.03 | -0.1229 |
MIMAT0003191 | rno-miR-493 | 303596 | Rnf190 | gacCGUG-UGUCAUCUGGA-AGu | |::| |||| |||||| || | ggaGUGCGACAG-AGACCUCUCc | 2 | 19 | 17 | 38 | [rn4:10:94763103-94763124:-] | 0.6657 | 123 | 0 | -17.46 | -0.2166 |
MIMAT0003209 | rno-miR-363* | 303596 | Rnf190 | uuUAACGUAG-CACU----AGGUGGGc | | |||: | | || ||||||| | ggAGUGCGACAGAGACCUCUCCACCCa | 2 | 21 | 17 | 43 | [rn4:10:94763098-94763124:-] | 0.6657 | 142 | 7 | -17.01 | -0.6233 |
MIMAT0005290 | rno-miR-883 | 303596 | Rnf190 | uaUGAC-UC---UCUACAA-CGUCAAu | |||| || | :|||| |||||| | aaACUGAAGCCAAUGUGUUCGCAGUUa | 2 | 21 | 95 | 121 | [rn4:10:94763020-94763046:-] | 0.6657 | 126 | 6 | -18.65 | -1.0205 |
MIMAT0005337 | rno-miR-760-3p | 303596 | Rnf190 | agGGGUGUCUGGGUC-UCGGc | ||: : |||||| |||| | gaCCUCUCCACCCAGAAGCCc | 2 | 19 | 30 | 50 | [rn4:10:94763091-94763111:-] | 0.6657 | 122 | 0 | -23.53 | -0.6039 |
MIMAT0000794 | rno-miR-24 | 303596 | Rnf190 | gacAAGGACGAC-UUGAC-UCGGu | | ::| ||| ||||| |||| | uccUCUUUACUGAAACUGAAGCCa | 2 | 20 | 83 | 106 | [rn4:10:94763035-94763058:-] | 0.6657 | 126 | 0 | -20.61 | -1.1238 |
MIMAT0000892 | rno-miR-223 | 303596 | Rnf190 | cccCAUAAACUGUUUGACUGu | | ||| ::|||||||| | cauGCAUUCAGUAAACUGACu | 2 | 19 | 321 | 341 | [rn4:10:94762800-94762820:-] | 0.6595 | 158 | 7 | -11.34 | -1.1425 |