March10
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0004654rno-miR-344-5p303596Rnf190ggacCUUAGAUCGGUCCUCGG-ACu ||:|| ||: |||||| || cccuGAGUCGAGU--GGAGCCAUGc221303325[rn4:10:94762816-94762838:-]0.65951250-24.00-0.4615
MIMAT0004719rno-miR-30c-1*303596Rnf190ccUCAUUUG-UUGG---GAGAGGGuc ||||||| :||: :|||||| ucAGUAAACUGACUUUAUUCUCCC--321328351[rn4:10:94762790-94762813:-]0.65951420-20.04-0.1898
MIMAT0004720rno-miR-30e*303596Rnf190cgacauuuGUAG-GCUGACUUUc | || : ||||||| ucuucccuCCUCUUUACUGAAAc2157698[rn4:10:94763043-94763065:-]0.66571417-7.01-0.9923
MIMAT0004722rno-miR-30d*303596Rnf190cgucguuuGUAG-ACUGACUUUc | || | ||||||| ucuucccuCCUCUUUACUGAAAc2157698[rn4:10:94763043-94763065:-]0.66571457-8.41-0.9923
MIMAT0000809rno-miR-30a*303596Rnf190cgacguuuGUAG-GCUGACUUUc | || : ||||||| ucuucccuCCUCUUUACUGAAAc2157698[rn4:10:94763043-94763065:-]0.66571417-7.17-0.9923
MIMAT0005442rno-miR-30c-2*303596Rnf190ucUCAUUUGUCGG----AAGAGGGuc ||||||| | | ||||||| ucAGUAAACUGACUUUAUUCUCCC--321328351[rn4:10:94762790-94762813:-]0.65951430-18.40-0.1898
MIMAT0000847rno-miR-142-5p303596Rnf190ucaucacgaaaGA-UGAAAUAc || ||||||| cauucaguaaaCUGACUUUAUu211325346[rn4:10:94762795-94762816:-]0.65951417-9.31-0.5303
MIMAT0004739rno-miR-204*303596Rnf190uugcagggaaacGGAAGGGUCg ||||||||| cagccacagggaCCUUCCCAGc211174195[rn4:10:94762946-94762967:-]0.66571507-24.36-0.1028
MIMAT0003191rno-miR-493303596Rnf190gaCCGU--GUGUCAUCUGGAAGu |||| ||||| :||||||| ugGGCAGCCACAG-GGACCUUCc220170191[rn4:10:94762950-94762971:-]0.66571647-26.03-0.1229
MIMAT0003191rno-miR-493303596Rnf190gacCGUG-UGUCAUCUGGA-AGu |::| |||| |||||| || ggaGUGCGACAG-AGACCUCUCc2191738[rn4:10:94763103-94763124:-]0.66571230-17.46-0.2166
MIMAT0003209rno-miR-363*303596Rnf190uuUAACGUAG-CACU----AGGUGGGc | |||: | | || ||||||| ggAGUGCGACAGAGACCUCUCCACCCa2211743[rn4:10:94763098-94763124:-]0.66571427-17.01-0.6233
MIMAT0005290rno-miR-883303596Rnf190uaUGAC-UC---UCUACAA-CGUCAAu |||| || | :|||| |||||| aaACUGAAGCCAAUGUGUUCGCAGUUa22195121[rn4:10:94763020-94763046:-]0.66571266-18.65-1.0205
MIMAT0005337rno-miR-760-3p303596Rnf190agGGGUGUCUGGGUC-UCGGc ||: : |||||| |||| gaCCUCUCCACCCAGAAGCCc2193050[rn4:10:94763091-94763111:-]0.66571220-23.53-0.6039
MIMAT0000794rno-miR-24303596Rnf190gacAAGGACGAC-UUGAC-UCGGu | ::| ||| ||||| |||| uccUCUUUACUGAAACUGAAGCCa22083106[rn4:10:94763035-94763058:-]0.66571260-20.61-1.1238
MIMAT0000892rno-miR-223303596Rnf190cccCAUAAACUGUUUGACUGu | ||| ::|||||||| cauGCAUUCAGUAAACUGACu219321341[rn4:10:94762800-94762820:-]0.65951587-11.34-1.1425
DNA & RNA Element - TRANSFAC
AccessionASDescriptionSpeciesEntrezPubmedBinding Info
G100199March10Rattus norvegicus303596
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
March10RAID00222214rno-miR-223-3pmiRNAMIMAT0000892March10mRNA303596Prediction0.1828
March10RAID01070830rno-miR-30c-2-3pmiRNAMIMAT0005442March10mRNA303596Prediction0.1828
March10RAID02151984rno-miR-24-3pmiRNAMIMAT0000794March10mRNA303596Prediction0.1828
March10RAID02341920rno-miR-30c-1-3pmiRNAMIMAT0004719March10mRNA303596Prediction0.1828
March10RAID03063668rno-miR-30a-3pmiRNAMIMAT0000809March10mRNA303596Prediction0.1828
March10RAID03218660rno-miR-30d-3pmiRNAMIMAT0004722March10mRNA303596Prediction0.1828
March10RAID03442424rno-miR-30e-3pmiRNAMIMAT0004720March10mRNA303596Prediction0.1828