Mnat1
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0004639rno-miR-325-3p266713Mnat1aacuauccuccacgaGUUAUUu |||||| auacauuuuuuaaaaCAAUAAa28281302[rn4:6:95698536-95698557:+]0.57941206-5.42-0.3902
MIMAT0004655rno-miR-345-3p266713Mnat1agagGUCUGGGGAU-CAAGUCCc | |:|: ||: ||||||| accgCUGGCUGCUGUGUUCAGGu219105127[rn4:6:95698360-95698382:+]0.57941537-22.46-0.5398
MIMAT0004731rno-miR-125b*266713Mnat1uccaggguUCUCGGACUGAAca | |||:|||||| aaaacaauAAAGCUUGACUUua315292313[rn4:6:95698547-95698568:+]0.57941380-14.39-0.1289
MIMAT0000847rno-miR-142-5p266713Mnat1ucAUCACGAAAGAUGAAAUAc || |||| ||||||| aaUAAAGCUU--GACUUUAUg220297315[rn4:6:95698552-95698570:+]0.57941487-14.46-0.5581
MIMAT0000847rno-miR-142-5p266713Mnat1ucaucACGAAAGAUGAA-AUAc | :|||:||||| ||| agauuUAUUUUUUACUUCUAUu217183204[rn4:6:95698438-95698459:+]0.57941280-7.64-0.9640
MIMAT0000899rno-miR-297266713Mnat1guACGUAUGUACGUGUGUAUGUa ||:||: :||: ||||||| uaUGUAUG-GUGUUGACAUACAu222265286[rn4:6:95698520-95698541:+]0.57941597-19.44-0.8900
MIMAT0000902rno-miR-300-3p266713Mnat1cuucucucgaacgggAACGUAu |||||| aagcugagaaaugugUUGCAUa28147168[rn4:6:95698402-95698423:+]0.57941206-12.55-0.1751
MIMAT0004791rno-miR-379*266713Mnat1caAUCACCUGGUACAA-UGUAUc || || |: :|||| ||||| ccUA-UGUAUGGUGUUGACAUAc221263284[rn4:6:95698518-95698539:+]0.57941260-9.17-1.0134
MIMAT0003380rno-miR-505266713Mnat1ccuuuGGU-CGU-UCACAACUg |:| |:| :||||||| uuugcCUAUGUAUGGUGUUGAc216259280[rn4:6:95698514-95698535:+]0.57941457-17.60-0.9402
MIMAT0003380rno-miR-505266713Mnat1ccUUUGG-UCGUU-CACAACug ||:|: || || |||||| ccAAGCUGAGAAAUGUGUUGca319145166[rn4:6:95698400-95698421:+]0.57941360-11.94-0.2099
MIMAT0005283rno-miR-872*266713Mnat1uccuccgAUGACGU-UAUC-AAGu |::|||| |||| ||| agaaaugUGUUGCAUAUAGAUUCa216153176[rn4:6:95698408-95698431:+]0.57941220-13.15-1.1037
MIMAT0005288rno-miR-880266713Mnat1agAUGAGUCU-UACUUACC-UCAu |::||||: :| |||| ||| ugUGUUCAGGUGUUUAUGGCAGUc221117140[rn4:6:95698372-95698395:+]0.57941230-16.41-0.5694
MIMAT0005327rno-miR-672266713Mnat1agugugugucauguggUUGGAGu |||||| agggaucgaagcauugAACCUCa28213235[rn4:6:95698468-95698490:+]0.57941206-14.93-0.2769
MIMAT0000583rno-miR-339-5p266713Mnat1gcacucgAGGACCUCCUGUCCCu |:|| | ||||||| acuucuaUUCUUCA-GACAGGGa217196217[rn4:6:95698451-95698472:+]0.57941467-19.38-1.0943
MIMAT0004650rno-miR-340-5p266713Mnat1uuagucagaguAAC-GAAAUAUu ||| ||||||: aacaauaaagcUUGACUUUAUGa212294316[rn4:6:95698549-95698571:+]0.57941300-8.02-0.4107
MIMAT0004650rno-miR-340-5p266713Mnat1uuagucagaguaacgAAAUAUu |||||| -ccuguauuuucucaUUUAUAa28121[rn4:6:95698256-95698276:+]0.57941206-7.57-0.2097
MIMAT0000839rno-miR-133a266713Mnat1guCGACCAACUUC--CCCUGGUUu |:| | | || ||||||| guGUUUAUGGCAGUCUGGACCAAg221126149[rn4:6:95698381-95698404:+]0.57941437-16.02-0.4190
MIMAT0000881rno-miR-210266713Mnat1agucgGCGACAGUGUG-CGUGUc ||| | ::||| ||||| gcccaCGCAGCUGCACAGCACAc21881103[rn4:6:95698336-95698358:+]0.57941250-20.68-0.1177
MIMAT0000886rno-miR-216a266713Mnat1agUGUC-AACGGUCGACUCUAAu |:|| || ::| |||||| auAUAGAUUCAUGGAAGAGAUUu221166188[rn4:6:95698421-95698443:+]0.57941236-11.44-0.1305
MIMAT0000887rno-miR-217266713Mnat1uaggucAGUCAAGGACUA-CGUCAu |||| | :| || ||||| cuguguUCAGGUGUUUAUGGCAGUc219116140[rn4:6:95698371-95698395:+]0.57941260-15.57-0.5514
MIMAT0003126rno-miR-133b266713Mnat1auCGACCAACUUC--CCCUGGUUu |:| | | || ||||||| guGUUUAUGGCAGUCUGGACCAAg221126149[rn4:6:95698381-95698404:+]0.57941437-16.02-0.4190
MIMAT0003176rno-miR-539266713Mnat1ugugugguuccuauuAAAGAGg |||||| --------ccuguauUUUCUCa28114[rn4:6:95698256-95698269:+]0.57941206-6.69-0.1018
MIMAT0003194rno-miR-376c266713Mnat1ugcacUUUA--AAGGAGAUACAa |||| ||: |||||| gaaauAAAUGAUUUGCCUAUGUa217248270[rn4:6:95698503-95698525:+]0.57941236-9.39-0.1347
DNA & RNA Element - miRNAMap
Gene NameMature miRNATarget StartTarget EndmiRNA 3-5AlignmentTarget 5-3
Mnat1; rCG_61721rno-let-7b88126-UUGGUGUGU-------UGGA---UGAUGG----AGU- |:|::|||| ||| :||:|: |||CAGCUGCACAGCACACCACCGCUGGCUGCUGUGUUCAG
Mnat1; rCG_61721rno-miR-133a111150-UGUCGAC-CAACUUCC---------------CCUGGUU- :| |||| ||| ||| |||||||GGCUGCUGUGUUC-AGGUGUUUAUGGCAGUCUGGACCAAG
Mnat1; rCG_61721rno-miR-133b107150AUCGACCA-----ACU--UCC---------------CCUGGUU ||||| || ||| |||||||-CGCUGGCUGCUGUGUUCAGGUGUUUAUGGCAGUCUGGACCAAG
Mnat1; rCG_61721rno-miR-13893112CUAAGUGU--UGUGGU--CGA- |||| |||||| |||---GCACAGCACACCACCGCUG
Mnat1; rCG_61721rno-miR-140*105130ACAGGC-ACCAAGAUGGGACA---CCAU- ||| ||| ||:|: ||| |||:--ACCGCUGG--CUGCUGUGUUCAGGUGU
Mnat1; rCG_61721rno-miR-142-5p302317CAUCACGAAAGAUGAAAUAC- |||| ||||||||----AGCUUG--ACUUUAUGA
Mnat1; rCG_61721rno-miR-145123147UUCCCUAAGGACCCUUUUGACCUG- ||| :||: ||| ||||||CAGGUGUUUAUGGCAGU-CUGGACC
Mnat1; rCG_61721rno-miR-148b210231-UGUUUCAAGACACUACGUGACU- |||::| || || |||:|||GACAGGGAUC---GAAGCAUUGAA
Mnat1; rCG_61721rno-miR-1503158GUGACCAUG-------UUCCCAACCCUCU :||| || |:||||| |||-CUUGGAACCAAACCAAGGGGUUUGGAA-
Mnat1; rCG_61721rno-miR-151120145GGAGUUCCUCGGA----GUCAGAUCA :|| ||| |:: ||||||:|GUUC-AGGUGUUUAUGGCAGUCUGGA
Mnat1; rCG_61721rno-miR-15b140167ACAUUUGGU---ACU----ACACGACGAU |::|||| ||| ||||:|||-CUGGACCAAGCUGAGAAAUGUGUUGCA-
Mnat1; rCG_61721rno-miR-195102120CGGUUAUAAAGACACGACGAU- ||| ||| ||||||:ACCACCG---CUG-GCUGCUGU
Mnat1; rCG_61721rno-miR-21078104AGUCGG------CGACAGUGUGCGUGUC ||||| |||| |||| |||||CCAGCCCACGCAGCUG-CACA-GCACAC
Mnat1; rCG_61721rno-miR-214108131-GACGGACAGACACGGA-CGACA- ||| ||| |||||:: | |||GCUGGCUG-CUGUGUUCAGGUGUU
Mnat1; rCG_61721rno-miR-217119141-UAGGUCAGUCAAGGACUACGUCAU :|:||| |||: |||||UGUUCAGGU-GUUUAUG--GCAGUC
Mnat1; rCG_61721rno-miR-2294119-UGUCAAGAAGU--UGACCGUCGAA |||| || :||||| |||CACAGCACACCACCGCUGGCUGCUG
Mnat1; rCG_61721rno-miR-27b103122CGUCUUGAAUCGGUGACACUU || :| |:||::|||||CCACCGC-UGGCUGCUGUGU-
Mnat1; rCG_61721rno-miR-291-3p207229CCGUGUGUUUCAC-CUUCGUGAAA || |||::| ||||||:|-UCAGACAGGGAUCGAAGCAUUG-
Mnat1; rCG_61721rno-miR-297264288-GUACGUAUGUACGUGUGUAUGUA- :|||:||: :||: ||||||||CUAUGUAUG-GUGUUGACAUACAUU
Mnat1; rCG_61721rno-miR-2987296CCUUCUU-GUCGGGAGGA--GACGG ||| |||||| ||||-AAAGUCCCAGCCCACGCAGCUGCA
Mnat1; rCG_61721rno-miR-29b255280UUGUGACUAAA---GUU--UACCACGAU- |||||| :| ||||||:|:----AUGAUUUGCCUAUGUAUGGUGUUGA
Mnat1; rCG_61721rno-miR-29c255280UGGCUAAA---GUU--UACCACGAU- :||||| :| ||||||:|:-AUGAUUUGCCUAUGUAUGGUGUUGA
Mnat1; rCG_61721rno-miR-30b110135-UCGACU-CACA--UCCUACAAAUGU :|||| |||| ||| ||||||:UGGCUGCUGUGUUCAGG-UGUUUAUG
Mnat1; rCG_61721rno-miR-30c107135-CGACUCU---CACA--UCCUACAAAUGU ||||: |||| ||| ||||||:CGCUGGCUGCUGUGUUCAGG-UGUUUAUG
Mnat1; rCG_61721rno-miR-32080101AAGCGGGAGAGUUGG---GUCGAAAA |||| ||:|: ||||--AGCCCACGCAGCUGCACAGCA---
Mnat1; rCG_61721rno-miR-324-3p95145GGUCG-----------UCGUGGAC-C-------------CCGUCA CC |||| :|| ||| | |||||| ||ACAGCACACCACCGCUGGCUGCUGUGUUCAGGUGUUUAUGGCAGUCUGGA
Mnat1; rCG_61721rno-miR-330107131AGAGACGUCCGG-GACACGAA---ACG- || |||: |||||:| ||:----CGCUGGCUGCUGUGUUCAGGUGUU
Mnat1; rCG_61721rno-miR-3312353AAGAUCCUAU--CCG------GGU-CCCCG- ||| |||| || ||| ||||:AUCU-GGAUCUUGGAACCAAACCAAGGGGUU
Mnat1; rCG_61721rno-miR-33371108UUUUCA------------UUGA----UCGUGUGGUG- ||||| |:|| ||||||||||UAAAGUCCCAGCCCACGCAGCUGCACAGCACACCACC
Mnat1; rCG_61721rno-miR-339181219ACUC------------GAGGACCUC----CUGUCCCU- ||| ||:|| ||||||||AGAGAUUUAUUUUUUACUUCUAUUCUUCAGACAGGGAU
Mnat1; rCG_61721rno-miR-346107139UCUCCGUCCGU------GAGUCCGU-----CUGU- || ||| :|||||: |:||---CGCUGGCUGCUGUGUUCAGGUGUUUAUGGCAG
Mnat1; rCG_61721rno-miR-34c97124-CGUUA-GU--CGAUUGAUGUGACGGA ||| || |||::||:| ||::AGCACACCACCGCUGGCUGCUGUGUUC
Mnat1; rCG_61721rno-miR-378122146UGUGUCCUGG---ACC-UCAGUCCUC |||| : ||| |||| |||--UCAGGUGUUUAUGGCAGUCUGGAC
Mnat1; rCG_61721rno-miR-412131156-UGCCGAUCA--CCUGGUCC-ACUUCA |:||| ||| |||||| | |||:UAUGGC-AGUCUGGACCAAGCUGAGA-
Mnat1; rCG_61721rno-miR-424102120AGGUUUUGUACUUAACGACGAC- ||| :| |||||||ACCACCGCUG-----GCUGCUGU
Mnat1; rCG_61721rno-miR-44977104UGGUCGAU--UGUU-AUGUGACG-GU- ||||| :||: |:||| || ||CCCAGCCCACGCAGCUGCACAGCACAC
Mnat1; rCG_61721rno-miR-485119143CUUAAGU-----AGUGCCGGUCGGAGA :|||| |:|:|| |||:||-UGUUCAGGUGUUUAUGG-CAGUCUG-
Mnat1; rCG_61721rno-miR-49797120AUGUUUGGUGUC-ACACGACGAC- :|| ||||| | || |||||||AGCACACCACCGCUG-GCUGCUGU
Mnat1; rCG_61721rno-miR-501205229AAAGUGGGUCCCU-GUUUCCUAA- |||| |||||| |:||| |||CUUCAGACAGGGAUCGAAGCAUUG
Mnat1; rCG_61721rno-miR-50395120-GUCAUGACAA---GGGCGACGAU- ||| || |: ||||||:ACAGCACACCACCGCUGGCUGCUGU
Mnat1; rCG_61721rno-miR-505256282CCUU--UGGU--CGU-UCACAACUG- || :|| |:| :||||||||UGAUUUGCCUAUGUAUGGUGUUGACA
Mnat1; rCG_61721rno-miR-7*130166-AUACCGUCUGAC--------ACUAA----ACAAC- |||||||| ||| ||| |||||UUAUGGCAGUCUGGACCAAGCUGAGAAAUGUGUUGC
Mnat1; rCG_61721rno-let-7b89110UUGGUGUGUUGGAUGAUGGAGu|:|::||||:| || ||| |AGCTGCACAGCACACCACCGCt
Mnat1; rCG_61721rno-miR-133a122148uGUCGACCAA---CUUC--CCCUGGUU ||| || || | || |||||||tCAGGTGTTTATGGCAGTCTGGACCAA
Mnat1; rCG_61721rno-miR-133b123148aUCGACCAA---CUUC--CCCUGGUU || || || | || |||||||cAGGTGTTTATGGCAGTCTGGACCAA
Mnat1; rCG_61721rno-miR-13890108CUAAGUGU--UGUGGUCGa| | |||| |||||| |GCTGCACAGCACACCACCg
Mnat1; rCG_61721rno-miR-140*103123acaGGC-ACCAAGAUGGGACACCAu ||| ||| ||: ||||| |ccaCCGCTGG--CTG--CTGTGTTc
Mnat1; rCG_61721rno-miR-148b211229UGUUUCAAGACACUACGUGACU|||::| || || |||:|||ACAGGGATC---GAAGCATTGA
Mnat1; rCG_61721rno-miR-1503659gugaccauGUUCCC--AACCCUCu |||||| |||| ||aaccaaacCAAGGGGTTTGGAAGt
Mnat1; rCG_61721rno-miR-15b139167ACAUUUGGU---AC----UACACGACGau| |::|||| || |||||:|||TCTGGACCAAGCTGAGAAATGTGTTGCat
Mnat1; rCG_61721rno-miR-19598118cgguuauaaagacaCGACGAu ||||||gcacaccaccgctgGCTGCTg
Mnat1; rCG_61721rno-miR-21491119GACG-GAC------AGAC-ACGGACGACA|||| | | | | || |||||||CTGCACAGCACACCACCGCTGGCTGCTGT
Mnat1; rCG_61721rno-miR-216134158guGUCA-AC--GG-UCGACUCUaau |||| || || ||||||||ggCAGTCTGGACCAAGCTGAGAaat
Mnat1; rCG_61721rno-miR-217116140uaggucAGUCAAGGACUA-CGUCAu |||| | :| || |||||ctgtgtTCAGGTGTTTATGGCAGTc
Mnat1; rCG_61721rno-miR-2295118UGUCAAGAAGU--UGACCGUCGAa|||| | || :||||| |||ACAGCACACCACCGCTGGCTGCTg
Mnat1; rCG_61721rno-miR-27b98122CGUCU--UG--AAUCGGUGACACuu||| | || |:||::|||||GCACACCACCGCTGGCTGCTGTGtt
Mnat1; rCG_61721rno-miR-291-3p206229ccGUGUGUUUC-ACCUUCGUGAaa || |||::| | ||||||:|ttCAGACAGGGATCGAAGCATTga
Mnat1; rCG_61721rno-miR-297265286gUACGUAUGUACGUGUGUAUGUA |||:||: :||: ||||||||tATGTATG-GTGTTGACATACAT
Mnat1; rCG_61721rno-miR-29889113ccuuCUUGUCG---GGAGGAGACgg | ||||| || || |||agctGCACAGCACACCACCGCTGgc
Mnat1; rCG_61721rno-miR-29b251278uugUGACUAAA--GUU---UACCACGAu | |||||| | | ||||||:|ataAATGATTTGCCTATGTATGGTGTTg
Mnat1; rCG_61721rno-miR-29c254278UGGCUAAA--GUU---UACCACGAu| :||||| | | ||||||:|AATGATTTGCCTATGTATGGTGTTg
Mnat1; rCG_61721rno-miR-30b114134uCGACUCACAUCCUACAAAUgu |||| || ||| ||||||tGCTGTGTTCAGG-TGTTTAtg
Mnat1; rCG_61721rno-miR-30c112134CGAC-UCUCACAUCCUACAAAUgu|||| | || ||| ||||||GCTGCTGTGTTCAGG-TGTTTAtg
Mnat1; rCG_61721rno-miR-3207395aagcGGGAGAGUUGGGUCGAaaa ||| | || |||||aagtCCCAGCCCACGCAGCTgca
Mnat1; rCG_61721rno-miR-324-3p122141gGUCGUCGUGGACCCCGUCAcc ||| |::::| ||||||tCAG--GTGTTTATGGCAGTct
Mnat1; rCG_61721rno-miR-33093121aGAGACGUCCGG----GAC--ACGAAACg | | ||| || ||| |||| ||gCACAGCACACCACCGCTGGCTGCTGTGt
Mnat1; rCG_61721rno-miR-3312951aAGAUCCU--AUCCGGGUCCCCg ||| ||| | || |||||aTCTTGGAACCAAACCAAGGGGt
Mnat1; rCG_61721rno-miR-33383106uuUUCAUUGA----UCGUGUGGUG | | |:|| ||||||||||ccACGCAGCTGCACAGCACACCAC
Mnat1; rCG_61721rno-miR-339198217acucgAGGACCUCCUGUCCCU |:|| | ||||||||ttctaTTCTTCA-GACAGGGA
Mnat1; rCG_61721rno-miR-346118141ucuccGUCCGUGAGU-CCGUCUGu ||||:::|:| ||||| |gtgttCAGGTGTTTATGGCAGTCt
Mnat1; rCG_61721rno-miR-34c93114CGUUAGUCGAUUGAU-GUGACGGA||| |||| || | |:||| ||GCA--CAGCACACCACCGCTGGCT
Mnat1; rCG_61721rno-miR-378120145uguGUCC---UGGACC-UCAGUCCUc |||| : ||| |||| |||gttCAGGTGTTTATGGCAGTCTGGAc
Mnat1; rCG_61721rno-miR-412109132ugCCGAUCAC-CUGGUCCACuuca ||||: || | :||||||ctGGCTGCTGTGTTCAGGTGttta
Mnat1; rCG_61721rno-miR-42497118agGUUUUGUACUUAACGACGAC || | || : | |||||||agCACACCACCGCTGGCTGCTG
Mnat1; rCG_61721rno-miR-44985111UG-GUCGAU-UGUUAU---GUGACGgu|| |||||: |||: | ||| ||ACGCAGCTGCACAGCACACCACCGCtg
Mnat1; rCG_61721rno-miR-485118143CUUAAGU-----AGUGCCGGUCGGAga| :|||| |:|:|| |||:||GTGTTCAGGTGTTTATGG-CAGTCTgg
Mnat1; rCG_61721rno-miR-50396115GUCAUGACAAG-GGCGA-CGAu||| || | ||||| |||CAGCAC--ACCACCGCTGGCTg
Mnat1; rCG_61721rno-miR-505259280ccuuuGGU-CGU-UCACAACUG |:| |:| :||||||||tttgcCTATGTATGGTGTTGAC
Mnat1; rCG_61721rno-miR-7*131164AUACCGUCUGAC--------AC----UAAACAAC|||||||| ||| || || |||||TATGGCAGTCTGGACCAAGCTGAGAAATGTGTTG
Mnat1; rCG_61721rno-miR-142-5p308315CAUCA-------------------------CGAAAGAUGAAAUAC |||| ||||||||GUGUUGACAUACAUUUUUUAAAACAAUAAAGCUUG--ACUUUAUGA
Mnat1; rCG_61721rno-miR-297279286---------------------GUACGUAUGUACGUGUGUAUGUA :|||:||: :||: ||||||||GAAAGAAAUAAAUGAUUUGCCUAUGUAUG-GUGUUGACAUACAUU
Mnat1; rCG_61721rno-miR-33399106UUUUCA-------------------UUGA----UCGUGUGGUG |:|| ||||||||||AAAUUUGUAAAGUCCCAGCCCACGCAGCUGCACAGCACACCACC
Mnat1; rCG_61721rno-miR-339210217ACUC------------------GAGGACCUC----CUGUCCCU ||:|| ||||||||CAUGGAAGAGAUUUAUUUUUUACUUCUAUUCUUCAGACAGGGAU
Mnat1; rCG_61721rno-miR-505273280C------------------CUU--UGGU--CGU-UCACAACUG || :|| |:| :||||||||UAACAAGAAAGAAAUAAAUGAUUUGCCUAUGUAUGGUGUUGACA
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
Mnat1RAID00130924rno-miR-376c-3pmiRNAMIMAT0003194Mnat1mRNA266713Prediction0.1828
Mnat1RAID00390627rno-miR-216a-5pmiRNAMIMAT0000886Mnat1mRNA266713Prediction0.1828
Mnat1RAID00686161rno-miR-3591miRNAMIMAT0017893Mnat1mRNA266713Prediction0.1828
Mnat1RAID01678240rno-miR-217-5pmiRNAMIMAT0000887Mnat1mRNA266713Prediction0.1828
Mnat1RAID01678811rno-miR-133b-3pmiRNAMIMAT0003126Mnat1mRNA266713Prediction0.1828
Mnat1RAID01736020rno-miR-3586-5pmiRNAMIMAT0017880Mnat1mRNA266713Prediction0.1828
Mnat1RAID02218819rno-miR-340-5pmiRNAMIMAT0004650Mnat1mRNA266713Prediction0.1828
Mnat1RAID02727619rno-miR-339-5pmiRNAMIMAT0000583Mnat1mRNA266713Prediction0.2202
Mnat1RAID02953440rno-miR-539-5pmiRNAMIMAT0003176Mnat1mRNA266713Prediction0.1828
Mnat1RAID03283380rno-miR-210-3pmiRNAMIMAT0000881Mnat1mRNA266713Prediction0.1828
Mnat1RAID03813615rno-miR-133a-3pmiRNAMIMAT0000839Mnat1mRNA266713Prediction0.1828