DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000550 rno-miR-323 314996 Klhl38 ucuccagcUGGCACAUUACac |:: ||||||| gcaaaauuAUUCUGUAAUGaa 3 14 532 552 [rn4:7:95042367-95042387:-] 0.6035 129 0 -7.12 -0.1838 MIMAT0000574 rno-miR-140* 314996 Klhl38 ggcacCAAG--AUGGGACACCAu |||| | ||||||| ucucaGUUCAAAAAGCUGUGGUg 2 17 17 39 [rn4:7:95042880-95042902:-] 0.5521 143 7 -15.76 -0.1865 MIMAT0000574 rno-miR-140* 314996 Klhl38 ggcaccaaGAUGG---GACACCau |||:| |||||| cuaggaagCUAUCAAGCUGUGGaa 3 14 605 628 [rn4:7:95042291-95042314:-] 0.6063 124 0 -17.27 -0.1207 MIMAT0000577 rno-miR-337 314996 Klhl38 uuuccguaguauAUCCUCGACUu || ||||||| gcuccaaaggccUA-GAGCUGAg 2 12 57 78 [rn4:7:95042841-95042862:-] 0.5422 141 7 -16.96 -0.2351 MIMAT0000591 rno-miR-343 314996 Klhl38 agacccgugUGCCUCCCUCu :| ||||||| aggccuagaGCUGAGGGAGu 2 12 64 83 [rn4:7:95042836-95042855:-] 0.5422 143 7 -18.42 -0.2721 MIMAT0000592 rno-miR-344-3p 314996 Klhl38 ugccaGUCCGAAACCGAUCUAGu | || | | ||||||| uauaaCUGGAUAGGUCUAGAUCa 2 19 188 210 [rn4:7:95042709-95042731:-] 0.5193 150 7 -19.89 -0.5190 MIMAT0004710 rno-miR-17-3p 314996 Klhl38 gguguucacggaagUGACGUCa ||||||| cuguggugggagagACUGCAGu 2 9 32 53 [rn4:7:95042866-95042887:-] 0.5521 140 7 -15.07 -0.1190 MIMAT0003152 rno-miR-22* 314996 Klhl38 auuucgaACGGUGACUUCUUGa || :| |||||||| auuauucUG-UAAUGAAGAACa 2 16 537 557 [rn4:7:95042362-95042382:-] 0.6035 149 7 -12.09 -1.2562 MIMAT0004712 rno-miR-23a* 314996 Klhl38 uuuaGGGUAGGGGUCCU-UGGGg | || ||||||| |||| cacaCACACGCCCAGGACACCCc 2 19 345 367 [rn4:7:95042552-95042574:-] 0.5350 130 0 -26.76 -0.4574 MIMAT0004712 rno-miR-23a* 314996 Klhl38 uuuaggguaGGGGUC-CUUGGGg ||| || |||||| gucuagagaCCCAAGAGAACCCu 2 14 386 408 [rn4:7:95042511-95042533:-] 0.5350 121 6 -22.22 -0.2974 MIMAT0004714 rno-miR-26b* 314996 Klhl38 cucgguuCAUUACCUCUUGUcc |||||| |||||| uuauucuGUAAUGAAGAACAua 3 16 538 559 [rn4:7:95042360-95042381:-] 0.6035 147 0 -12.91 -0.1101 MIMAT0004717 rno-miR-29b-2* 314996 Klhl38 gauuCGGUGGUACACUUUGGUc | || |||| ||||||| agguGACAGCAUGAGAAACCAg 2 19 436 457 [rn4:7:95042462-95042483:-] 0.5948 166 7 -22.35 -0.5574 MIMAT0004726 rno-miR-101a* 314996 Klhl38 cguagUCGUGACACUAUUGACu :||||| | ||||||| gaaagGGCACUAUUAUAACUGg 2 18 175 196 [rn4:7:95042723-95042744:-] 0.5193 165 7 -17.06 -0.3635 MIMAT0000847 rno-miR-142-5p 314996 Klhl38 ucaucacgaaagAUGAAAUAc |||||||| aaugccaguggaUACUUUAUa 2 10 122 142 [rn4:7:95042777-95042797:-] 0.5193 145 7 -9.67 -1.1344 MIMAT0001547 rno-miR-450a 314996 Klhl38 guAAUCCUUGUGUAGCGUUUUu ||| | : |:|||||| auUUACCUAGGGUUUGCAAAAu 2 21 517 538 [rn4:7:95042381-95042402:-] 0.6007 132 6 -11.84 -0.1526 MIMAT0003124 rno-miR-412 314996 Klhl38 ugccgaucacCUGGUCCACU-UCa |:|||||||| || ucaccccucaGGCCAGGUGACAGc 2 14 422 445 [rn4:7:95042474-95042497:-] 0.5889 125 0 -19.65 -0.3286 MIMAT0003212 rno-miR-20b-3p 314996 Klhl38 ggucuucacgagUGUGACGUCa | ||||||| cuguggugggagAGACUGCAGu 2 11 32 53 [rn4:7:95042866-95042887:-] 0.5521 142 7 -15.85 -0.1190 MIMAT0003382 rno-miR-664 314996 Klhl38 auccgaccccuCAUUUACUUau || |||||| aaaauuauucuGU-AAUGAAga 3 12 534 554 [rn4:7:95042365-95042385:-] 0.6035 121 0 -4.24 -0.1232 MIMAT0005278 rno-miR-466b 314996 Klhl38 guacCUGUAUGUGUGUGUGUAu |||| | ||||||||| cacuGACACAACCACACACAUg 2 19 309 330 [rn4:7:95042589-95042610:-] 0.5271 166 7 -21.64 -0.3352 MIMAT0005283 rno-miR-872* 314996 Klhl38 uccuCCGAUGACGUUAU-CAAGu | ||::| | ||| |||| ucacGACUGUUUCCAUACGUUCu 2 19 458 480 [rn4:7:95042439-95042461:-] 0.6007 122 0 -8.66 -0.2820 MIMAT0005323 rno-miR-532-3p 314996 Klhl38 acgUUCGGAACCCACACCCUCc ||||: || ||||||| aaaAAGCUGUG---GUGGGAGa 2 20 26 44 [rn4:7:95042875-95042893:-] 0.5521 151 7 -18.45 -0.5892 MIMAT0005336 rno-miR-760-5p 314996 Klhl38 gcCCGAGACCACCGGACUCCCc ||| || | | ||||||| aaGGC-CUAGAG--CUGAGGGa 2 21 63 81 [rn4:7:95042838-95042856:-] 0.5422 147 7 -18.24 -0.2571 MIMAT0012826 rno-miR-220 314996 Klhl38 uccagagacUGUGACACCACc | :|||||||| caguucaaaAAGCUGUGGUGg 2 13 20 40 [rn4:7:95042879-95042899:-] 0.5521 148 7 -21.15 -0.1363 MIMAT0012834 rno-miR-592 314996 Klhl38 ugUAGUAGCGUAUAACUGUGUUa ||: | | | | |||||||| gaAUUCU-GGACACUGACACAAc 2 22 299 320 [rn4:7:95042599-95042620:-] 0.5271 155 7 -10.04 -0.2961 MIMAT0000575 rno-miR-335 314996 Klhl38 uguaaaaagcaauaacGAGAACu |||||| aaaauuccauccuuacCUCUUGa 2 8 142 164 [rn4:7:95042755-95042777:-] 0.5193 120 6 -10.06 -0.1447 MIMAT0004650 rno-miR-340-5p 314996 Klhl38 uuaGUCAGAGUAACGAAAUAUu ||| | : | ||||||| ugcCAG--UGGAUACUUUAUAa 2 20 124 143 [rn4:7:95042776-95042795:-] 0.5193 144 7 -9.33 -1.1688 MIMAT0000600 rno-miR-129 314996 Klhl38 cguucGGGUCU--GGCGUUUUuc ||:||: ::|||||| auuuaCCUAGGGUUUGCAAAAuu 3 17 517 539 [rn4:7:95042380-95042402:-] 0.6007 131 0 -16.01 -0.1392 MIMAT0000606 rno-miR-7a 314996 Klhl38 uguuguuuuagugaucAGAAGGu |||||| cuucuggugccuguucUCUUCCa 2 8 578 600 [rn4:7:95042319-95042341:-] 0.6063 120 6 -11.57 -0.1023 MIMAT0000780 rno-miR-7b 314996 Klhl38 uguuguuuuaguguucAGAAGGu |||||| cuucuggugccuguucUCUUCCa 2 8 578 600 [rn4:7:95042319-95042341:-] 0.6063 120 6 -9.29 -0.1023 MIMAT0000788 rno-miR-19b 314996 Klhl38 agUCA-AAACGUA-CCUAAACGUgu ||| ||| | | ||:|||||| ucAGUAUUUACCUAGGGUUUGCAaa 3 22 512 536 [rn4:7:95042383-95042407:-] 0.6007 147 0 -16.79 -0.1078 MIMAT0000789 rno-miR-19a 314996 Klhl38 agUCA-AAACGUAU-CUAAACGUgu ||| ||| | || |:|||||| ucAGUAUUUACCUAGGGUUUGCAaa 3 22 512 536 [rn4:7:95042383-95042407:-] 0.6007 147 0 -14.40 -0.1078 MIMAT0000796 rno-miR-26a 314996 Klhl38 ucggauaggaccUAAUGAACUu | ||||||| agaaguggguuaACUACUUGAu 2 11 224 245 [rn4:7:95042674-95042695:-] 0.5193 142 7 -11.99 -0.3292 MIMAT0000797 rno-miR-26b 314996 Klhl38 uggauaggACUUAAUGAACUu | || ||||||| gaagugggUUAACUACUUGAu 2 14 225 245 [rn4:7:95042674-95042694:-] 0.5193 149 7 -9.26 -0.3292 MIMAT0000838 rno-miR-132 314996 Klhl38 gcugguaccgacauCUGACAAu ||||||| gagaaaccagucacGACUGUUu 2 9 448 469 [rn4:7:95042450-95042471:-] 0.5948 140 7 -12.89 -0.3181 MIMAT0000840 rno-miR-134 314996 Klhl38 ggggagACCAGUUGGUCAGUGu || |||||||||| acagcaUGAGAAACCAGUCACg 2 17 441 462 [rn4:7:95042457-95042478:-] 0.5948 156 7 -22.53 -0.3503 MIMAT0000851 rno-miR-145 314996 Klhl38 ucccuaagGACCCUUUUGACCUg || | ||||||| aaagggcaCUAUUAUAACUGGAu 2 16 176 198 [rn4:7:95042721-95042743:-] 0.5193 143 7 -18.17 -0.7344 MIMAT0000873 rno-miR-200c 314996 Klhl38 gguaguaaUGGGCC--GUCAUAAu ||:| | ||||||| gaaagaagACUCAGUUCAGUAUUu 2 15 497 520 [rn4:7:95042399-95042422:-] 0.6007 145 7 -11.00 -0.9934 MIMAT0000875 rno-miR-200b 314996 Klhl38 caguaguaauGGUC-CGUCAUAAu :||| ||||||| gaaagaagacUCAGUUCAGUAUUu 2 14 497 520 [rn4:7:95042399-95042422:-] 0.6007 144 7 -11.92 -0.9934 MIMAT0000878 rno-miR-205 314996 Klhl38 gucUGAGGCCACCUUACUUCcu |:| : || ||||||| aaaAUUAUUCUGUAAUGAAGaa 3 20 534 555 [rn4:7:95042364-95042385:-] 0.6035 135 0 -11.26 -0.1192 MIMAT0000883 rno-miR-212 314996 Klhl38 accggcacugaccuCUGACAAu ||||||| gagaaaccagucacGACUGUUu 2 9 448 469 [rn4:7:95042450-95042471:-] 0.5948 140 7 -12.76 -0.3181 MIMAT0001538 rno-miR-429 314996 Klhl38 ugccguaauGGUC-UGUCAUAAu :||| ||||||| aaagaagacUCAGUUCAGUAUUu 2 14 498 520 [rn4:7:95042399-95042421:-] 0.6007 144 7 -12.97 -0.9934 MIMAT0003208 rno-miR-374 314996 Klhl38 guGAAUCGUCCAACAUAAUAUa || | :|| ||||||| guCUGAAAGGGCACUAUUAUAa 2 21 171 192 [rn4:7:95042727-95042748:-] 0.5193 148 7 -8.69 -0.4854 MIMAT0005310 rno-miR-384-3p 314996 Klhl38 uaacacuuGUUAAAGAUCCUUa ||: |||||||| uucucuucCAGACUCUAGGAAg 2 15 591 612 [rn4:7:95042307-95042328:-] 0.6063 150 7 -13.00 -0.3970 MIMAT0005316 rno-miR-455 314996 Klhl38 gcUACAUCAGGUUUCCGUG-UAu |||| | ||:||||| || caAUGU-CUGAAAGGGCACUAUu 2 21 167 188 [rn4:7:95042731-95042752:-] 0.5193 122 0 -13.64 -0.6419

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G100050 Klhl38 Rattus norvegicus 314996

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Klhl38 RAID00059401 rno-miR-455-5p miRNA MIMAT0005316 Klhl38 mRNA 314996 Prediction 0.1828 Klhl38 RAID00103625 rno-miR-101a-5p miRNA MIMAT0004726 Klhl38 mRNA 314996 Prediction 0.1828 Klhl38 RAID00340073 rno-miR-145-5p miRNA MIMAT0000851 Klhl38 mRNA 314996 Prediction 0.2202 Klhl38 RAID00460502 rno-miR-3568 miRNA MIMAT0017848 Klhl38 mRNA 314996 Prediction 0.1828 Klhl38 RAID00472952 rno-miR-22-5p miRNA MIMAT0003152 Klhl38 mRNA 314996 Prediction 0.1828 Klhl38 RAID00568891 rno-miR-374-5p miRNA MIMAT0003208 Klhl38 mRNA 314996 Prediction 0.1828 Klhl38 RAID00626623 rno-miR-19a-3p miRNA MIMAT0000789 Klhl38 mRNA 314996 Prediction 0.1828 Klhl38 RAID00706212 rno-miR-19b-3p miRNA MIMAT0000788 Klhl38 mRNA 314996 Prediction 0.1828 Klhl38 RAID00726360 rno-miR-203a-3p miRNA MIMAT0000876 Klhl38 mRNA 314996 Prediction 0.1828 Klhl38 RAID00833866 rno-miR-200b-3p miRNA MIMAT0000875 Klhl38 mRNA 314996 Prediction 0.1828 Klhl38 RAID00858459 rno-miR-7a-5p miRNA MIMAT0000606 Klhl38 mRNA 314996 Prediction 0.1828 Klhl38 RAID01014338 rno-miR-384-3p miRNA MIMAT0005310 Klhl38 mRNA 314996 Prediction 0.1828 Klhl38 RAID01127531 rno-miR-340-5p miRNA MIMAT0004650 Klhl38 mRNA 314996 Prediction 0.1828 Klhl38 RAID01501483 rno-miR-134-5p miRNA MIMAT0000840 Klhl38 mRNA 314996 Prediction 0.1828 Klhl38 RAID01504158 rno-miR-200c-3p miRNA MIMAT0000873 Klhl38 mRNA 314996 Prediction 0.1828 Klhl38 RAID01598867 rno-miR-129-5p miRNA MIMAT0000600 Klhl38 mRNA 314996 Prediction 0.1828 Klhl38 RAID01693363 rno-miR-203b-3p miRNA MIMAT0017800 Klhl38 mRNA 314996 Prediction 0.1828 Klhl38 RAID01732442 rno-miR-3590-5p miRNA MIMAT0017889 Klhl38 mRNA 314996 Prediction 0.1828 Klhl38 RAID01745529 rno-miR-132-3p miRNA MIMAT0000838 Klhl38 mRNA 314996 Prediction 0.1828 Klhl38 RAID01763124 rno-miR-205 miRNA MIMAT0000878 Klhl38 mRNA 314996 Prediction 0.1828 Klhl38 RAID02740166 rno-miR-26b-5p miRNA MIMAT0000797 Klhl38 mRNA 314996 Prediction 0.1828 Klhl38 RAID02970587 rno-miR-429 miRNA MIMAT0001538 Klhl38 mRNA 314996 Prediction 0.1828 Klhl38 RAID03118667 rno-miR-466d miRNA MIMAT0017824 Klhl38 mRNA 314996 Prediction 0.1828 Klhl38 RAID03240149 rno-miR-335 miRNA MIMAT0000575 Klhl38 mRNA 314996 Prediction 0.1828 Klhl38 RAID03418772 rno-miR-7b miRNA MIMAT0000780 Klhl38 mRNA 314996 Prediction 0.1828 Klhl38 RAID03807560 rno-miR-26a-5p miRNA MIMAT0000796 Klhl38 mRNA 314996 Prediction 0.1828 Klhl38 RAID03855612 rno-miR-212-3p miRNA MIMAT0000883 Klhl38 mRNA 314996 Prediction 0.1828