DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004639 rno-miR-325-3p 315405 Dcun1d5 aacuauccuccacgaGUUAUUu |||||| acauuuauuucagaaCAAUAAa 2 8 209 230 [rn4:8:4094106-4094127:+] 0.7370 120 6 -5.42 -0.4168 MIMAT0004646 rno-miR-338* 315405 Dcun1d5 guGAGUCGUGGUCCUAUAACaa :|| | : | | |||||| ucUUCUGAGACUGAAUAUUGac 3 21 162 183 [rn4:8:4094059-4094080:+] 0.7370 132 0 -10.24 -0.1525 MIMAT0000591 rno-miR-343 315405 Dcun1d5 agaccCGUGU-GCCUCCCUCu ||| | |||||||| aaaauGCAAAGAGGAGGGAGa 2 16 38 58 [rn4:8:4093935-4093955:+] 0.7370 150 7 -22.65 -1.0840 MIMAT0000598 rno-miR-347 315405 Dcun1d5 accCGCUGGGUCUCCCUgu || | :|||||| aauGCAAAGAGGAGGGAga 3 17 40 58 [rn4:8:4093937-4093955:+] 0.7370 124 0 -14.51 -0.1164 MIMAT0000603 rno-miR-20a* 315405 Dcun1d5 acauucacgagcaUUACGUca |||||| accuugugaagaaAAUGCAaa 3 9 27 47 [rn4:8:4093924-4093944:+] 0.7370 120 0 -8.33 -0.1229 MIMAT0000604 rno-miR-350 315405 Dcun1d5 cacUUUCACAUACCCGAAACACUu |||| | | | ||||||| aauAAAG-AU-UCAGAUUUGUGAc 2 22 225 246 [rn4:8:4094122-4094143:+] 0.7370 145 7 -7.02 -1.2468 MIMAT0000604 rno-miR-350 315405 Dcun1d5 cacuuucacauacccgaAACACUu |||||| --------caagaacugUUGUGAa 2 8 1 16 [rn4:8:4093898-4093913:+] 0.7370 120 6 -8.61 -0.1622 MIMAT0000607 rno-miR-7a* 315405 Dcun1d5 uacCGUCUGACACU--AAACAAca | | |:|| | |||||| acuGAAUAUUGACAUUUUUGUUuc 3 20 171 194 [rn4:8:4094068-4094091:+] 0.7370 126 0 -4.21 -0.3747 MIMAT0003152 rno-miR-22* 315405 Dcun1d5 auUUCGAACGGUGACUUCUUga || |||| ||||||| caAACCUUG----UGAAGAAaa 3 21 24 41 [rn4:8:4093921-4093938:+] 0.7370 131 0 -10.39 -0.2310 MIMAT0004714 rno-miR-26b* 315405 Dcun1d5 cucgGUUCAUUACCUCUUGUcc || || | |||||| uuaaCAUUUAUUUCAGAACAau 3 19 206 227 [rn4:8:4094103-4094124:+] 0.7370 130 0 -5.98 -0.3733 MIMAT0004720 rno-miR-30e* 315405 Dcun1d5 cgACAUUUGUAGGCUGACUUuc ||| | | ||||||| caUGUCUUC-UGAGACUGAAua 3 21 158 178 [rn4:8:4094055-4094075:+] 0.7370 126 0 -10.31 -0.3109 MIMAT0004722 rno-miR-30d* 315405 Dcun1d5 cgUC-GUUUGUAGA-----CUGACUUuc || || |::||| ||||||| ugAGCCACAUGUCUUCUGAGACUGAAua 3 21 151 178 [rn4:8:4094048-4094075:+] 0.7370 130 0 -12.70 -0.3109 MIMAT0000809 rno-miR-30a* 315405 Dcun1d5 cgacguuuguaggCUGACUUuc ||||||| acaugucuucugaGACUGAAua 3 10 157 178 [rn4:8:4094054-4094075:+] 0.7370 125 0 -10.92 -0.3109 MIMAT0000847 rno-miR-142-5p 315405 Dcun1d5 ucAUCACGAAAGAUG-AAAUAc || ||:|||: || ||||| guUA-UGUUUUUAACAUUUAUu 2 20 197 217 [rn4:8:4094094-4094114:+] 0.7370 129 0 -7.41 -1.2613 MIMAT0003116 rno-miR-501 315405 Dcun1d5 aaagugggucccuGUUUCCUaa :|||||| uuuuccuuuuuuuUAAAGGAag 3 10 104 125 [rn4:8:4094001-4094022:+] 0.7370 121 0 -11.70 -0.3942 MIMAT0003124 rno-miR-412 315405 Dcun1d5 ugccgaucaccuggucCACUUCa |||||| -----caagaacuguuGUGAAGa 2 8 1 18 [rn4:8:4093898-4093915:+] 0.7370 120 6 -9.62 -0.1347 MIMAT0003124 rno-miR-412 315405 Dcun1d5 ugccgaucaccuggucCACUUCa |||||| agacaaugcaaaccuuGUGAAGa 2 8 16 38 [rn4:8:4093913-4093935:+] 0.7370 120 6 -13.16 -0.2030 MIMAT0005280 rno-miR-743b 315405 Dcun1d5 agAUAAGUCAUACCACAGAAAg |:||: :| |||:||| uuUGUUUCAAGUUAUGUUUUUa 2 21 187 208 [rn4:8:4094084-4094105:+] 0.7370 132 0 -8.16 -0.1929 MIMAT0005281 rno-miR-871 315405 Dcun1d5 acacuggccgugguuaGACUUAu |||||| cacaugucuucugagaCUGAAUa 2 8 156 178 [rn4:8:4094053-4094075:+] 0.7370 120 6 -11.26 -0.3461 MIMAT0012824 rno-miR-513 315405 Dcun1d5 uacUUUCUGUGGAAGAACACUu |||||: | :|||||| aauAAAGAUUCAGAUUUGUGAc 2 20 225 246 [rn4:8:4094122-4094143:+] 0.7370 143 6 -11.72 -0.3649 MIMAT0012824 rno-miR-513 315405 Dcun1d5 uacUUUCUGUGG----AAGAACACUu :|||||| : ||||||| uguGAAGACAAUGCAAACCUUGUGAa 2 20 11 36 [rn4:8:4093908-4093933:+] 0.7370 142 7 -18.03 -1.0081 MIMAT0012824 rno-miR-513 315405 Dcun1d5 uacuUUCUGUGGAAGAACACUu |||| || | |||||| ---cAAGA-AC--UGUUGUGAa 2 19 1 16 [rn4:8:4093898-4093913:+] 0.7370 121 6 -12.53 -0.1591 MIMAT0012829 rno-miR-511 315405 Dcun1d5 acUCACGUCUCGUUUUCCGua || : | | |||||| ucAGAUUUGUGACAAAGGC-- 3 20 234 252 [rn4:8:4094131-4094149:+] 0.6813 123 0 -8.14 -0.1372 MIMAT0012838 rno-miR-653 315405 Dcun1d5 gucaucucuUAC-AAAGUUGUg ||| |||:|||| uuucaaguuAUGUUUUUAACAu 2 13 191 212 [rn4:8:4094088-4094109:+] 0.7370 135 0 -10.22 -0.1988 MIMAT0012840 rno-miR-802 315405 Dcun1d5 uuCCUACUUAGAAACAAUG-ACu ||| | |: ||||||| || aaGGAAGUUUUCUUGUUACAUGu 2 21 119 141 [rn4:8:4094016-4094038:+] 0.7370 128 0 -15.30 -1.0825 MIMAT0012854 rno-miR-764 315405 Dcun1d5 ucCU-CCUGUACACUC-GUGg || ||:||| |||| ||| guGAUGGGCAU-UGAGCCACa 2 18 140 159 [rn4:8:4094037-4094056:+] 0.7370 122 0 -17.65 -1.1688 MIMAT0000792 rno-miR-23a 315405 Dcun1d5 ccuuuAGGGACCGU-UACACUa |:|:|| :| |||||| aaguuUUCUUGUUACAUGUGAu 2 17 123 144 [rn4:8:4094020-4094041:+] 0.7370 124 6 -13.33 -0.8961 MIMAT0000793 rno-miR-23b 315405 Dcun1d5 ccauuAGGGACCGU-UACACUa |:|:|| :| |||||| aaguuUUCUUGUUACAUGUGAu 2 17 123 144 [rn4:8:4094020-4094041:+] 0.7370 124 6 -14.41 -0.8961 MIMAT0000794 rno-miR-24 315405 Dcun1d5 gacaaggACGACU--UGACUCGGu || ||: |:|||||| uuacaugUGAUGGGCAUUGAGCCa 2 16 134 157 [rn4:8:4094031-4094054:+] 0.7370 134 6 -18.86 -0.1735 MIMAT0000812 rno-miR-33 315405 Dcun1d5 acguuACGUUGAUGUUACGUg ||::| |||||||| acuguUGUGAAGACAAUGCAa 2 17 6 26 [rn4:8:4093903-4093923:+] 0.7370 156 7 -13.75 -0.7729 MIMAT0000812 rno-miR-33 315405 Dcun1d5 acguuACGUUGAUGUUACGUg ||::| | |||||| aaccuUGUGAAGAAAAUGCAa 2 17 26 46 [rn4:8:4093923-4093943:+] 0.7370 124 6 -9.67 -0.1304 MIMAT0000869 rno-miR-194 315405 Dcun1d5 agGUGUACCUC--AACGACAAUGu :| | | || || :|||||| uuUAAAGGAAGUUUUCUUGUUACa 2 21 115 138 [rn4:8:4094012-4094035:+] 0.7370 135 6 -14.32 -0.1480 MIMAT0000876 rno-miR-203 315405 Dcun1d5 gaucACCAGGAUU-U--GUAAAGUg || |::||| | :|||||| guuaUGUUUUUAACAUUUAUUUCAg 2 19 197 221 [rn4:8:4094094-4094118:+] 0.7370 136 6 -8.85 -0.4803 MIMAT0000882 rno-miR-211 315405 Dcun1d5 ucCGUUUCCUACUGUUUC-CCUu | |:| ||| ||||| ||| guGAAGAAAAUG-CAAAGAGGAg 2 21 32 53 [rn4:8:4093929-4093950:+] 0.7370 122 0 -13.70 -0.8003 MIMAT0001549 rno-miR-365 315405 Dcun1d5 uauuccuaAAAAUCCCCGUAAu | | | ||||||| uuguuacaUGUGAUGGGCAUUg 2 15 131 152 [rn4:8:4094028-4094049:+] 0.7370 146 7 -11.66 -1.0361 MIMAT0003193 rno-miR-494 315405 Dcun1d5 ucCAAAGGGCACAUACAAAGu ||||| || |||||||: uuGUUUCAAGU-UAUGUUUUu 2 20 188 207 [rn4:8:4094085-4094104:+] 0.7370 149 0 -14.23 -0.3140 MIMAT0003193 rno-miR-494 315405 Dcun1d5 uccaAAGGGCACAUACAAAGu || | | | |||||| aauaUUGACAUUUUUGUUUCa 2 18 175 195 [rn4:8:4094072-4094092:+] 0.7370 121 6 -7.05 -0.5746 MIMAT0005307 rno-miR-375 315405 Dcun1d5 agugcgcucggcuugCUUGUUu |||||| uuaacauuuauuucaGAACAAu 2 8 206 227 [rn4:8:4094103-4094124:+] 0.7370 120 6 -6.28 -0.4451 MIMAT0005311 rno-miR-410 315405 Dcun1d5 uguccgguagacaCAAUAUAa |||||:| auuuuuguuucaaGUUAUGUu 2 9 184 204 [rn4:8:4094081-4094101:+] 0.7370 124 0 -8.08 -0.1723 MIMAT0005320 rno-miR-495 315405 Dcun1d5 uuCUUCACGUGGUACAAACAAa ||| :: ||| |||||| cuGAAUAUUGACAUUUUUGUUu 2 21 172 193 [rn4:8:4094069-4094090:+] 0.7370 128 6 -8.11 -0.2790 MIMAT0005320 rno-miR-495 315405 Dcun1d5 uucuucACGUGGUACAA-ACAAa ||: :|| ||| |||| cauuuuUGUUUCAAGUUAUGUUu 2 17 183 205 [rn4:8:4094080-4094102:+] 0.7370 120 0 -7.72 -1.2243

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G099364 Dcun1d5 Rattus norvegicus 315405

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Dcun1d5 RAID00193094 rno-miR-129-5p miRNA MIMAT0000600 Dcun1d5 mRNA 315405 Prediction 0.1828 Dcun1d5 RAID00525283 rno-miR-494-3p miRNA MIMAT0003193 Dcun1d5 mRNA 315405 Prediction 0.1828 Dcun1d5 RAID00584191 rno-miR-375-3p miRNA MIMAT0005307 Dcun1d5 mRNA 315405 Prediction 0.1828 Dcun1d5 RAID00907882 rno-miR-23b-3p miRNA MIMAT0000793 Dcun1d5 mRNA 315405 Prediction 0.1828 Dcun1d5 RAID01021189 rno-miR-23a-3p miRNA MIMAT0000792 Dcun1d5 mRNA 315405 Prediction 0.1828 Dcun1d5 RAID01100442 rno-miR-350 miRNA MIMAT0000604 Dcun1d5 mRNA 315405 Prediction 0.1828 Dcun1d5 RAID01370800 rno-miR-203a-3p miRNA MIMAT0000876 Dcun1d5 mRNA 315405 Prediction 0.1828 Dcun1d5 RAID01681725 rno-miR-211-5p miRNA MIMAT0000882 Dcun1d5 mRNA 315405 Prediction 0.1828 Dcun1d5 RAID01761526 rno-miR-194-5p miRNA MIMAT0000869 Dcun1d5 mRNA 315405 Prediction 0.1828 Dcun1d5 RAID01921473 rno-miR-365-3p miRNA MIMAT0001549 Dcun1d5 mRNA 315405 Prediction 0.2202 Dcun1d5 RAID01992174 rno-miR-24-3p miRNA MIMAT0000794 Dcun1d5 mRNA 315405 Prediction 0.1828 Dcun1d5 RAID02475478 rno-miR-325-3p miRNA MIMAT0004639 Dcun1d5 mRNA 315405 Prediction 0.1828 Dcun1d5 RAID02529927 rno-miR-33-5p miRNA MIMAT0000812 Dcun1d5 mRNA 315405 Prediction 0.2202 Dcun1d5 RAID02812141 rno-miR-411-3p miRNA MIMAT0017304 Dcun1d5 mRNA 315405 Prediction 0.1828 Dcun1d5 RAID03226547 rno-miR-7578 miRNA MIMAT0029579 Dcun1d5 mRNA 315405 Prediction 0.1828 Dcun1d5 RAID03282612 rno-miR-452-3p miRNA MIMAT0035749 Dcun1d5 mRNA 315405 Prediction 0.1828 Dcun1d5 RAID03294916 rno-miR-495 miRNA MIMAT0005320 Dcun1d5 mRNA 315405 Prediction 0.1828 Dcun1d5 RAID03789131 rno-miR-195-3p miRNA MIMAT0017149 Dcun1d5 mRNA 315405 Prediction 0.1828 Dcun1d5 RAID03827787 rno-miR-410-3p miRNA MIMAT0005311 Dcun1d5 mRNA 315405 Prediction 0.1828 Dcun1d5 RAID03905001 rno-miR-653-5p miRNA MIMAT0012838 Dcun1d5 mRNA 315405 Prediction 0.1828 Dcun1d5 RAID04055783 rno-miR-3585-5p miRNA MIMAT0017878 Dcun1d5 mRNA 315405 Prediction 0.1828