DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000550 rno-miR-323 246244 Tax1bp1 ucuccagcuggcacAUUACAc |||||| cacaggaguuauuuUAAUGUu 2 8 68 88 [rn4:4:81081340-81081360:+] 0.5522 120 6 -5.78 -0.2425 MIMAT0003152 rno-miR-22* 246244 Tax1bp1 auuucgaacggugACUUCUUGa |||||||| uagcaaaaguguaUGAAGAACa 2 10 48 69 [rn4:4:81081320-81081341:+] 0.5522 145 7 -13.42 -1.2731 MIMAT0004718 rno-miR-29a* 246244 Tax1bp1 gacUUGUGGUUUUCUUUAGUCa | :||| |: |||||| uuaAUUACCUAGCACAAUCAGa 2 20 114 135 [rn4:4:81081386-81081407:+] 0.5522 123 6 -10.18 -0.1816 MIMAT0005445 rno-miR-29b-1* 246244 Tax1bp1 uuUAGAUUUGGUGGUAUACUUu ||: ||| || :||||| | aaAUUGAAAACA-UAUAUGUAa 2 21 90 110 [rn4:4:81081362-81081382:+] 0.5522 130 0 -8.11 -0.1104 MIMAT0003121 rno-miR-483 246244 Tax1bp1 uguucugcccuccccUCCUCAcu |||||| guguaugaagaacacAGGAGUua 3 9 56 78 [rn4:4:81081328-81081350:+] 0.5522 120 0 -8.37 -0.2652 MIMAT0003175 rno-miR-543* 246244 Tax1bp1 ucuucacguggcgcUUACAAa |||||| acaggaguuauuuuAAUGUUa 2 8 69 89 [rn4:4:81081341-81081361:+] 0.5522 120 6 -9.77 -0.5442 MIMAT0005283 rno-miR-872* 246244 Tax1bp1 uccuccgAUG-ACGUUAUCAAgu ||: ||:||||||| gaaaacaUAUAUGUAAUAGUUaa 3 16 95 117 [rn4:4:81081367-81081389:+] 0.5522 138 0 -11.12 -0.2946 MIMAT0000849 rno-miR-143 246244 Tax1bp1 acUCGAUGUCACGAAG-UAGAGu ||:| | | :||| ||||| agAGUUUCUGCAUUUCUAUCUCu 2 21 18 40 [rn4:4:81081290-81081312:+] 0.5522 124 0 -15.02 -0.6128 MIMAT0000865 rno-miR-190 246244 Tax1bp1 ugGAUUAUAUAGUUUGUAUAgu :||| || |||||||| ugUUAAAAUUGAAAACAUAUau 3 21 85 106 [rn4:4:81081357-81081378:+] 0.5522 144 0 -8.59 -0.1545 MIMAT0000869 rno-miR-194 246244 Tax1bp1 agguguaccUCAACGACAA-UGu |||| ||||| || agauuuacaAGUUCCUGUUCACc 2 14 133 155 [rn4:4:81081405-81081427:+] 0.5522 121 0 -13.10 -0.6798 MIMAT0000888 rno-miR-218 246244 Tax1bp1 ugUACCAAU--CUAGUUCGUGUu || |||| | | |||||| uaAUAGUUAAUUACCUAGCACAa 2 20 108 130 [rn4:4:81081380-81081402:+] 0.5522 126 6 -11.32 -0.1246 MIMAT0000889 rno-miR-219-5p 246244 Tax1bp1 ucUUAACGCAAACCUGUUAGu |||| | | | |||||| uuAAUUAC-CUAGCACAAUCa 2 20 114 133 [rn4:4:81081386-81081405:+] 0.5522 125 6 -7.66 -0.1336 MIMAT0001534 rno-miR-448 246244 Tax1bp1 uaccCUGUAGGAUGUAUACGUu || | | |:|||||:| aauuGAAAAC--AUAUAUGUAa 2 19 91 110 [rn4:4:81081363-81081382:+] 0.5522 131 0 -9.79 -0.1137 MIMAT0005302 rno-miR-190b 246244 Tax1bp1 uugGAUUAUAG--UUUGUAUAgu :||| ||: |||||||| augUUAAAAUUGAAAACAUAUau 3 19 84 106 [rn4:4:81081356-81081378:+] 0.5522 141 0 -7.40 -0.1530 MIMAT0005339 rno-miR-873 246244 Tax1bp1 uccUCUGAGUGUUCAAGGACg |||:|:||||||||||| aucAGAUUUACAAGUUCCUGu 2 19 130 150 [rn4:4:81081402-81081422:+] 0.5522 182 7 -28.42 -1.0811

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G044762 Tax1bp1 Rattus norvegicus 246244

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Tax1bp1 RAID00334395 rno-miR-873-5p miRNA MIMAT0005339 Tax1bp1 mRNA 246244 Prediction 0.1828 Tax1bp1 RAID00371496 rno-miR-190b-5p miRNA MIMAT0005302 Tax1bp1 mRNA 246244 Prediction 0.1828 Tax1bp1 RAID00925096 rno-miR-143-3p miRNA MIMAT0000849 Tax1bp1 mRNA 246244 Prediction 0.1828 Tax1bp1 RAID00951941 rno-miR-328a-3p miRNA MIMAT0000564 Tax1bp1 mRNA 246244 Prediction 0.1828 Tax1bp1 RAID02129133 rno-miR-3568 miRNA MIMAT0017848 Tax1bp1 mRNA 246244 Prediction 0.1828 Tax1bp1 RAID02136975 rno-miR-448-3p miRNA MIMAT0001534 Tax1bp1 mRNA 246244 Prediction 0.1828 Tax1bp1 RAID02159145 rno-miR-219a-5p miRNA MIMAT0000889 Tax1bp1 mRNA 246244 Prediction 0.1828 Tax1bp1 RAID02408328 rno-miR-328b-3p miRNA MIMAT0017904 Tax1bp1 mRNA 246244 Prediction 0.1828 Tax1bp1 RAID02414289 rno-miR-218a-5p miRNA MIMAT0000888 Tax1bp1 mRNA 246244 Prediction 0.1828 Tax1bp1 RAID02518295 rno-miR-22-5p miRNA MIMAT0003152 Tax1bp1 mRNA 246244 Prediction 0.1828 Tax1bp1 RAID02818059 rno-miR-194-5p miRNA MIMAT0000869 Tax1bp1 mRNA 246244 Prediction 0.1828 Tax1bp1 RAID03957719 rno-miR-190a-5p miRNA MIMAT0000865 Tax1bp1 mRNA 246244 Prediction 0.1828