DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000547 rno-miR-322* 363452 Otud5 acaACGUCGCGAAG-UACAAa || ||| |||| ||||| aucUG-AGC-CUUCAAUGUUa 2 18 446 464 [rn4:X:26661188-26661206:-] 0.6531 121 0 -11.75 -1.2762 MIMAT0000550 rno-miR-323 363452 Otud5 ucUCCAGCUGG--CACAUUACAc || || ||| |||||||| caAGAUCCACCAUCUGUAAUGUc 2 20 873 895 [rn4:X:26660757-26660779:-] 0.6531 158 7 -13.03 -0.4498 MIMAT0000561 rno-miR-327 363452 Otud5 ugggaguacgggGAGUUCc |||||| ucauggccacuaCUCAAGa 2 8 792 810 [rn4:X:26660842-26660860:-] 0.6531 120 6 -15.91 -0.1006 MIMAT0000568 rno-miR-330* 363452 Otud5 agagacguCCGGGACACGAAACg | | :| ||||||| gugaagauGACAUUCUGCUUUGg 2 16 542 564 [rn4:X:26661088-26661110:-] 0.6531 147 7 -9.81 -0.4266 MIMAT0000576 rno-miR-336 363452 Otud5 ucugaUCU-AUACCU-UCCCACu :|| | |||| |||||| acaggGGACUCUGGACAGGGUGc 2 17 241 263 [rn4:X:26661389-26661411:-] 0.7119 123 6 -19.26 -0.2639 MIMAT0004654 rno-miR-344-5p 363452 Otud5 ggacCUUAGAUCGGUCCUCGGAcu |||||| |||||| ugaaGAAUCU------GAGCCUuc 3 21 440 457 [rn4:X:26661195-26661212:-] 0.6531 121 0 -13.71 -0.1063 MIMAT0000601 rno-miR-129* 363452 Otud5 uacgAAAAACCCCAUUCCCGAa || | || ||||||| ccaaUUCCUUGG--AAGGGCUa 2 19 632 651 [rn4:X:26661001-26661020:-] 0.6531 143 7 -13.59 -0.3742 MIMAT0000610 rno-miR-352 363452 Otud5 augauacGUUGGAUGAUGAGa :::|| ||||||| gaaaucaUGGCC-ACUACUCa 2 15 788 807 [rn4:X:26660845-26660864:-] 0.6531 144 7 -13.11 -0.6569 MIMAT0004710 rno-miR-17-3p 363452 Otud5 gguguucacGGAAGUGACGUCa | | |||||||| uggggcaccCGUGCACUGCAGg 2 14 845 866 [rn4:X:26660786-26660807:-] 0.6531 149 7 -20.65 -0.2492 MIMAT0003153 rno-miR-24-1* 363452 Otud5 gacuauagucgagUCAUCCGUg :||||||| acagggugcggaaGGUAGGCAa 2 10 255 276 [rn4:X:26661376-26661397:-] 0.7473 141 7 -20.21 -0.5593 MIMAT0005441 rno-miR-24-2* 363452 Otud5 ugacaaagucgagUCAUCCGUg :||||||| acagggugcggaaGGUAGGCAa 2 10 255 276 [rn4:X:26661376-26661397:-] 0.7473 141 7 -18.05 -0.5557 MIMAT0004717 rno-miR-29b-2* 363452 Otud5 gaUUCGGUGGUACAC-UUUGGUc || :|| || || |||||| caAAAUCAACAAAUGAAAACCAa 2 21 497 519 [rn4:X:26661133-26661155:-] 0.6531 128 6 -9.57 -1.0609 MIMAT0004717 rno-miR-29b-2* 363452 Otud5 gauucggugguacacUUUGGUc |||||| guccuuggcacaauaAAACCAa 2 8 893 914 [rn4:X:26660738-26660759:-] 0.6531 120 6 -9.37 -0.1799 MIMAT0004718 rno-miR-29a* 363452 Otud5 gacuuGUGGUUUUCUUUAGUca :|:| | |||||| ugcuuUAUCUCACAAAAUCAac 3 18 485 506 [rn4:X:26661146-26661167:-] 0.6531 125 0 -6.16 -0.1189 MIMAT0004731 rno-miR-125b* 363452 Otud5 uccaggGUUCUCGGACU-GAACa ::| ||:|||| |||| ggacagUGACAGUCUGACCUUGc 2 17 704 726 [rn4:X:26660926-26660948:-] 0.6531 124 0 -15.89 -0.5776 MIMAT0000847 rno-miR-142-5p 363452 Otud5 ucaucacgaaAGAUGAAAUAc | |:|||||| uugauuaaaaUGUGCUUUAUc 2 12 473 493 [rn4:X:26661159-26661179:-] 0.6531 131 6 -6.79 -0.1502 MIMAT0003121 rno-miR-483 363452 Otud5 uguUCUGCCCUC-CCCUCCUC-ACu ||| || || || ||||| || gccAGAGGGAAGUGGCAGGAGAUGc 2 21 661 685 [rn4:X:26660967-26660991:-] 0.6531 131 0 -22.37 -0.1809 MIMAT0003174 rno-miR-540 363452 Otud5 gguccUAGCUG-GAGACUGGa | :||| ||||||| uggacAGUGACAGUCUGACCu 2 16 703 723 [rn4:X:26660929-26660949:-] 0.6531 146 7 -22.62 -0.2755 MIMAT0004787 rno-miR-543 363452 Otud5 cgcUUUUUGUGCGC-CCGU-UGAa ::|:|::|| | |||| ||| gcaGGAGAUGCGGGUGGCAGACUg 2 20 675 698 [rn4:X:26660954-26660977:-] 0.6531 122 0 -18.45 -0.1565 MIMAT0003175 rno-miR-543* 363452 Otud5 ucuucACGUGGCGCUUACAAa || :|| : |||||| gaaucUGAGCCUUCAAUGUUa 2 17 444 464 [rn4:X:26661188-26661208:-] 0.6531 124 6 -6.13 -0.3063 MIMAT0003178 rno-miR-542-5p 363452 Otud5 agCACUGUAC--UACUAGGGGCUc | ||| | | |||||||| caGGGACUGGACACCAUCCCCGAu 2 21 9 32 [rn4:X:26661620-26661643:-] 0.6765 147 7 -19.40 -0.1429 MIMAT0003209 rno-miR-363* 363452 Otud5 uuuaacguagcacuaGGUGGGc |||||| uccugcccuuuaaugCCACCCa 2 8 40 61 [rn4:X:26661591-26661612:-] 0.6765 120 6 -12.97 -0.1142 MIMAT0003212 rno-miR-20b-3p 363452 Otud5 ggucuucacGAGUGUGACGUCa | ::|||||||| uggggcaccCGUGCACUGCAGg 2 14 845 866 [rn4:X:26660786-26660807:-] 0.6531 149 7 -18.31 -0.2492 MIMAT0003380 rno-miR-505 363452 Otud5 ccuuugGUCGUUCACAACUg | |||:||||||| cgugcaCUGCAGGUGUUGAc 2 15 854 873 [rn4:X:26660779-26660798:-] 0.6531 158 7 -22.01 -0.1727 MIMAT0005281 rno-miR-871 363452 Otud5 acACUGGCCGUGGU--UAGAC-UUAu |||| | ||| ||||| ||| guUGACAAGAUCCACCAUCUGUAAUg 2 22 868 893 [rn4:X:26660759-26660784:-] 0.6531 124 0 -17.83 -0.3760 MIMAT0005319 rno-miR-484 363452 Otud5 uagccCUCCCCUGACUCGGAcu || | |||||||| ucccuGAAGAAUCUGAGCCUuc 3 18 436 457 [rn4:X:26661195-26661216:-] 0.6531 133 0 -13.95 -0.1149 MIMAT0005323 rno-miR-532-3p 363452 Otud5 acGUUCGGAACCCACACCCUCc ::| ::| ||| ||||||| uuUGAAUUUAGGGAGUGGGAGc 2 21 811 832 [rn4:X:26660820-26660841:-] 0.6531 160 7 -20.15 -0.2605 MIMAT0005323 rno-miR-532-3p 363452 Otud5 acguucggaacccaCACCCUCc ||||||| ugaugacaagaaaaGUGGGAGu 2 9 394 415 [rn4:X:26661237-26661258:-] 0.6632 140 7 -16.36 -1.0277 MIMAT0005333 rno-miR-742 363452 Otud5 aaaUGGG-UUGUA-CCACCGAAAg |||| ||| | ||||||| gccACCCAAACUUCUUUGGCUUUc 2 20 54 77 [rn4:X:26661575-26661598:-] 0.6765 153 7 -20.48 -0.8190 MIMAT0005333 rno-miR-742 363452 Otud5 aaauggGUUGUACCACCGAAAg :::|| ||||||| ugcgggUGGCAGACUGGCUUUg 2 17 683 704 [rn4:X:26660948-26660969:-] 0.6531 144 7 -12.47 -0.1060 MIMAT0012838 rno-miR-653 363452 Otud5 guCAUCUCUUACAAAGU-UGUg | |||||: |||| ||| caGAAGAGAGACAUUCAGACAa 2 20 317 338 [rn4:X:26661314-26661335:-] 0.6733 123 0 -15.15 -0.9116 MIMAT0012838 rno-miR-653 363452 Otud5 gucaucucuuacaaAGUUGUg |||||| uuuaucucacaaaaUCAACAa 2 8 488 508 [rn4:X:26661144-26661164:-] 0.6531 120 6 -6.15 -0.2723 MIMAT0000583 rno-miR-339-5p 363452 Otud5 gcacucgaggaccuCCUGUCCCu |||||||| ccacaggggacucuGGACAGGGu 2 10 239 261 [rn4:X:26661391-26661413:-] 0.7119 145 7 -24.37 -0.1422 MIMAT0000596 rno-miR-346 363452 Otud5 ucuCCGUCC-GUGAGU---CCGUCUGu |||||| |: |: ||||||| aguGGCAGGAGAUGCGGGUGGCAGACu 2 21 671 697 [rn4:X:26660955-26660981:-] 0.6531 150 7 -26.91 -0.1977 MIMAT0000792 rno-miR-23a 363452 Otud5 ccUUU--AGGGACCG---UUACACua ||| |:|:|| : |||||| uaAAAUUUUCUUGAUUAAAAUGUGcu 3 20 463 488 [rn4:X:26661164-26661189:-] 0.6531 125 0 -10.00 -0.2239 MIMAT0000793 rno-miR-23b 363452 Otud5 ccauuAGGGACCG---UUACACua |:|:|| : |||||| aaauuUUCUUGAUUAAAAUGUGcu 3 17 465 488 [rn4:X:26661164-26661187:-] 0.6531 123 0 -10.00 -0.2239 MIMAT0000794 rno-miR-24 363452 Otud5 gaCAAGGACGACUU-GACUCGGu || |||| ||| ||||||| aaGUCCCUGAAGAAUCUGAGCCu 2 21 433 455 [rn4:X:26661197-26661219:-] 0.6531 167 7 -25.29 -1.2176 MIMAT0003203 rno-miR-485 363452 Otud5 cuuaaguagugccgGUCGGAGa ||||||| uuagggagugggagCAGCCUCa 2 9 818 839 [rn4:X:26660813-26660834:-] 0.6531 140 7 -16.03 -0.3534 MIMAT0005316 rno-miR-455 363452 Otud5 gcuACAU--CAGGUUUCCGUGUau |||| |||| |||||| aucUGUAAUGUCC-UUGGCACAau 3 20 884 906 [rn4:X:26660746-26660768:-] 0.6531 132 0 -17.23 -0.1301 MIMAT0005335 rno-miR-758 363452 Otud5 ccaauCACCUGGUCCAGUGUUu ||| ::| |||||| aaaauGUGCUUUAUCUCACAAa 2 18 479 500 [rn4:X:26661152-26661173:-] 0.6531 121 6 -10.89 -0.3134

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G097778 Otud5 Rattus norvegicus 363452

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Otud5 RAID00497931 rno-miR-128-1-5p miRNA MIMAT0017118 Otud5 mRNA 363452 Prediction 0.1828 Otud5 RAID00872043 rno-miR-23a-3p miRNA MIMAT0000792 Otud5 mRNA 363452 Prediction 0.1828 Otud5 RAID01325622 rno-miR-328a-5p miRNA MIMAT0017029 Otud5 mRNA 363452 Prediction 0.1828 Otud5 RAID01938324 rno-miR-455-5p miRNA MIMAT0005316 Otud5 mRNA 363452 Prediction 0.1828 Otud5 RAID01968850 rno-miR-742-3p miRNA MIMAT0005333 Otud5 mRNA 363452 Prediction 0.1828 Otud5 RAID02379803 rno-miR-485-5p miRNA MIMAT0003203 Otud5 mRNA 363452 Prediction 0.1828 Otud5 RAID02381922 rno-miR-365-5p miRNA MIMAT0017184 Otud5 mRNA 363452 Prediction 0.1828 Otud5 RAID02388521 rno-miR-346 miRNA MIMAT0000596 Otud5 mRNA 363452 Prediction 0.1828 Otud5 RAID02455846 rno-miR-339-5p miRNA MIMAT0000583 Otud5 mRNA 363452 Prediction 0.1828 Otud5 RAID02822735 rno-miR-128-2-5p miRNA MIMAT0017119 Otud5 mRNA 363452 Prediction 0.1828 Otud5 RAID03039545 rno-miR-758-3p miRNA MIMAT0005335 Otud5 mRNA 363452 Prediction 0.1828 Otud5 RAID03178978 rno-miR-23b-3p miRNA MIMAT0000793 Otud5 mRNA 363452 Prediction 0.1828 Otud5 RAID03211207 rno-miR-325-3p miRNA MIMAT0004639 Otud5 mRNA 363452 Prediction 0.1828 Otud5 RAID03330298 rno-miR-6332 miRNA MIMAT0025073 Otud5 mRNA 363452 Prediction 0.1828 Otud5 RAID03397073 rno-miR-3589 miRNA MIMAT0017888 Otud5 mRNA 363452 Prediction 0.1828 Otud5 RAID03642257 rno-miR-24-3p miRNA MIMAT0000794 Otud5 mRNA 363452 Prediction 0.2202