DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT006531 rno-miR-199a-5p Rattus norvegicus Ube2g1 64631 Rattus norvegicus Luciferase reporter assay Functional MTI 20965886

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000547 rno-miR-322* 64631 Ube2g1 acaACGUCGCGAAGUACAaa ||:| :||||||| cgaUGUAUAUUUUCAUGUaa 3 18 1049 1068 [rn4:10:59576842-59576861:+] 0.7409 133 0 -10.16 -0.4391 MIMAT0000547 rno-miR-322* 64631 Ube2g1 acaACGUCGCGAAGUACAaa | :| :| ||||||| auaUAUACUG-UUCAUGUac 3 18 287 305 [rn4:10:59576080-59576098:+] 0.7712 127 0 -7.55 -0.1060 MIMAT0000557 rno-miR-325-5p 64631 Ube2g1 ugugaAUGACUCGUGGAUGAUCc |||||| | |||||| uaaaaUACUGA--A-AUACUAGa 2 19 612 631 [rn4:10:59576405-59576424:+] 0.5738 121 6 -12.76 -0.1514 MIMAT0000568 rno-miR-330* 64631 Ube2g1 agAGACGUCCGGGACACGAAACg || || |: |||||||| ggUCAUCA--CUAGGUGCUUUGu 2 22 667 687 [rn4:10:59576460-59576480:+] 0.5697 146 7 -15.60 -0.1945 MIMAT0004645 rno-miR-148b-5p 64631 Ube2g1 ggacucacauauugUCUUGAAg ||||||| gucacuaucuccugAGAACUUu 2 9 769 790 [rn4:10:59576562-59576583:+] 0.4731 140 7 -11.79 -0.5970 MIMAT0004654 rno-miR-344-5p 64631 Ube2g1 ggaccUUA-GAUCGGUCCUCGGAcu ||| || | || |||||| ucauuAAUGCU-GACAAGAGCCUaa 3 20 156 179 [rn4:10:59575949-59575972:+] 0.7712 136 0 -13.27 -0.1031 MIMAT0004655 rno-miR-345-3p 64631 Ube2g1 agaggucuGGGGAUCAAGUCCc | |:|| |||||| aguaacuuCACUUAUUUCAGGg 2 15 17 38 [rn4:10:59570801-59570821,59575831-59575831:+] 0.7806 126 6 -20.27 -0.1297 MIMAT0004655 rno-miR-345-3p 64631 Ube2g1 agaggucuggggaucAAGUCCc |||||| ugaacuguuuuaaccUUCAGGa 2 8 221 242 [rn4:10:59576014-59576035:+] 0.7712 120 6 -14.58 -0.2577 MIMAT0004709 rno-miR-10a-3p 64631 Ube2g1 auaaggggaucuaugCUUAAAc |||||| uguaauuugauuuugGAAUUUu 2 8 1064 1085 [rn4:10:59576857-59576878:+] 0.7409 120 6 -3.56 -0.1653 MIMAT0000783 rno-miR-10b 64631 Ube2g1 ugUGUU-UAAGCCAAGAUGUCCc |:|: || || ||||||| auAUAGCAUGCGCAGCUACAGGc 2 21 912 934 [rn4:10:59576705-59576727:+] 0.5361 151 7 -17.03 -0.2286 MIMAT0004711 rno-miR-21* 64631 Ube2g1 cugucgGGUAGCUGACGACAac ||| | |||||| cuuguaCCAAAUAAUGCUGUcu 3 17 320 341 [rn4:10:59576113-59576134:+] 0.7712 128 0 -11.89 -0.1708 MIMAT0004716 rno-miR-28* 64631 Ube2g1 aggucCUCGAGUGUUA-GAUCAc |||||| ::|| ||||| guugaGAGCUCUUGAUCCUAGUc 2 18 749 771 [rn4:10:59576542-59576564:+] 0.5214 133 0 -17.78 -0.5343 MIMAT0004717 rno-miR-29b-2* 64631 Ube2g1 gaUUCG-GUGGUACAC-UUUGGUc |||| :::|| ||| |||||| uaAAGCAUGUCAGGUGAAAACCAa 2 21 433 456 [rn4:10:59576226-59576249:+] 0.6654 135 6 -17.02 -1.1590 MIMAT0004717 rno-miR-29b-2* 64631 Ube2g1 gauucggugguacacUUUGGUc |||||| cauauaauuuccuuuAAACCAu 2 8 474 495 [rn4:10:59576267-59576288:+] 0.6654 120 6 -5.92 -0.1238 MIMAT0004718 rno-miR-29a* 64631 Ube2g1 gacUUGUGGUUUUCUUUA-GUCa |||| :| || |||| ||| ccaAACAAUACAA-AAAUCCAGa 2 20 842 863 [rn4:10:59576635-59576656:+] 0.4731 125 0 -7.53 -1.1475 MIMAT0005445 rno-miR-29b-1* 64631 Ube2g1 uuUAGAUUUGGUGGUAU-ACUUu ||:| |:|:| ||| |||| ucAUUU-AGCUAAAAUACUGAAa 2 21 603 624 [rn4:10:59576396-59576417:+] 0.5738 122 0 -9.71 -1.2372 MIMAT0004720 rno-miR-30e* 64631 Ube2g1 cgACAUUUGUAGGCUGACUUUc | ||: :| ||||||| caUUUAGCUAAAAUACUGAAAu 2 21 604 625 [rn4:10:59576397-59576418:+] 0.5738 144 7 -7.59 -1.1673 MIMAT0004721 rno-miR-30b-3p 64631 Ube2g1 cugcauuuGUAGGUGUAGG-GUc ||| :|||||| || auacuguuCAUGUACAUCCACAa 2 15 291 313 [rn4:10:59576084-59576106:+] 0.7712 122 0 -17.05 -1.1592 MIMAT0004722 rno-miR-30d* 64631 Ube2g1 cgUCGUUUGUAGACUGACUUUc ||| || || ||||||| uuAGCUAAAAU---ACUGAAAu 2 21 607 625 [rn4:10:59576400-59576418:+] 0.5738 152 7 -8.63 -1.1525 MIMAT0000809 rno-miR-30a* 64631 Ube2g1 cgaCGUUUGUAGGCUGACUUUc || || || ||||||| uuaGCUAAAAU---ACUGAAAu 2 20 607 625 [rn4:10:59576400-59576418:+] 0.5738 147 7 -8.12 -1.1525 MIMAT0004735 rno-miR-139-3p 64631 Ube2g1 gagguugucccggcgCAGAGGu |||||| uucacuuauuucaggGUCUCCa 2 8 23 44 [rn4:10:59570807-59570821,59575831-59575837:+] 0.7806 120 6 -19.71 -0.2625 MIMAT0004736 rno-miR-193* 64631 Ube2g1 aguagaacgGGCGUUUCUGGGu ::|:|||||||: caggaagaaUUGUAAAGACCUg 2 14 238 259 [rn4:10:59576031-59576052:+] 0.7712 137 0 -15.90 -0.1620 MIMAT0004740 rno-miR-218* 64631 Ube2g1 gcgccacgaacugucUUGGUAc |||||| auauaauuuccuuuaAACCAUu 2 8 475 496 [rn4:10:59576268-59576289:+] 0.6654 120 6 -6.28 -0.1242 MIMAT0000894 rno-miR-291a-5p 64631 Ube2g1 ucucucccggaggugAAACUAc |||||| uauauuuucauguaaUUUGAUu 2 8 1054 1075 [rn4:10:59576847-59576868:+] 0.7409 120 6 -7.09 -0.1477 MIMAT0000899 rno-miR-297 64631 Ube2g1 guACGUAUGUACGUGUGUAU-GUa ||:| | | :::||||| || auUGUAAAGACCUGUACAUAGCAc 2 22 246 269 [rn4:10:59576039-59576062:+] 0.7712 121 0 -12.40 -1.1931 MIMAT0000901 rno-miR-299 64631 Ube2g1 uacauacacccugccAUUUGGu |||||| ccauauaauuuccuuUAAACCa 2 8 473 494 [rn4:10:59576266-59576287:+] 0.6654 120 6 -6.54 -0.2895 MIMAT0003113 rno-miR-489 64631 Ube2g1 cgacgGUAUAU-AC-ACUACA-GUAa :||||| || | |||| ||| uaauaUAUAUACUGUUCAUGUACAUc 2 19 283 308 [rn4:10:59576076-59576101:+] 0.7712 124 0 -9.53 -1.0152 MIMAT0003116 rno-miR-501 64631 Ube2g1 aaagugggucccuguUUCCUAa |||||| caggugaaaaccaauAAGGAUu 2 8 443 464 [rn4:10:59576236-59576257:+] 0.6654 120 6 -12.46 -0.1034 MIMAT0004787 rno-miR-543 64631 Ube2g1 cgcuuuUUGUGCGCCCG-UUGAa |||| |: ||| |||| uguuguAACAAGUUGGCAAACUc 2 17 100 122 [rn4:10:59575893-59575915:+] 0.7712 124 0 -11.13 -0.6491 MIMAT0003191 rno-miR-493 64631 Ube2g1 gaccgugugucaucUGGAAGu |||||| aaugaacuguuuuaACCUUCa 2 8 219 239 [rn4:10:59576012-59576032:+] 0.7712 120 6 -11.98 -0.2183 MIMAT0003378 rno-miR-378* 64631 Ube2g1 uguguccuggaccucAGUCCUc |||||| gaacuguuuuaaccuUCAGGAa 2 8 222 243 [rn4:10:59576015-59576036:+] 0.7712 120 6 -11.44 -0.1618 MIMAT0003378 rno-miR-378* 64631 Ube2g1 uguguccuggaccuCAGUCCuc |||||| auuucuuaaagcauGUCAGGug 3 9 427 448 [rn4:10:59576220-59576241:+] 0.6654 120 0 -10.66 -0.1155 MIMAT0003382 rno-miR-664 64631 Ube2g1 auccgaccccucauUUACUUau |||||| gcauuuugaauucuAAUGAAcu 3 9 205 226 [rn4:10:59575998-59576019:+] 0.7712 120 0 -3.04 -0.1646 MIMAT0005278 rno-miR-466b 64631 Ube2g1 guacCUG--UAUGUGU-GUG-UGUAu ||| :||||:| ||| |||| uaaaGACCUGUACAUAGCACAACAUg 2 19 250 275 [rn4:10:59576043-59576068:+] 0.7712 124 0 -16.92 -0.9645 MIMAT0005279 rno-miR-466c 64631 Ube2g1 guACAUGUACGUGUGUA-GUGu ||| |||| :|||| ||| acUGUUCAUG--UACAUCCACa 2 20 293 312 [rn4:10:59576086-59576105:+] 0.7712 124 0 -18.65 -1.2560 MIMAT0005280 rno-miR-743b 64631 Ube2g1 agauaagucauaccaCAGAAAg |||||| ccuuuaaaccauugaGUCUUUc 2 8 484 505 [rn4:10:59576277-59576298:+] 0.6654 120 6 -9.04 -0.1492 MIMAT0005315 rno-miR-434 64631 Ube2g1 uccucagcucacuacCAAGUUu |||||| caucguuuuuuaucaGUUCAAa 2 8 402 423 [rn4:10:59576195-59576216:+] 0.6654 120 6 -8.27 -0.2612 MIMAT0005319 rno-miR-484 64631 Ube2g1 uagcccucccCUG-ACUCGGAcu ||| |||||| cauuaaugcuGACAAGAGCCUaa 3 13 157 179 [rn4:10:59575950-59575972:+] 0.7712 123 0 -10.64 -0.1052 MIMAT0005334 rno-miR-743a 64631 Ube2g1 agaugggucaaaccgCAGAAAg |||||| ccuuuaaaccauugaGUCUUUc 2 8 484 505 [rn4:10:59576277-59576298:+] 0.6654 120 6 -13.52 -0.1478 MIMAT0012823 rno-miR-490 64631 Ube2g1 gucguaccucaggagGUCCAAc |||||| ucuaaaagacuuuagCAGGUUu 2 8 368 389 [rn4:10:59576161-59576182:+] 0.6961 120 6 -9.09 -0.1147 MIMAT0012828 rno-miR-362 64631 Ube2g1 uaaguguggauccaagGUUCCUAa :|||||| gucaggugaaaaccaaUAAGGAUu 2 9 441 464 [rn4:10:59576234-59576257:+] 0.6654 124 6 -14.05 -0.1034 MIMAT0012830 rno-miR-504 64631 Ube2g1 cugucucacgucuGGUCCCAGa :||||||| aacuucacuuauuUCAGGGUCu 2 10 20 41 [rn4:10:59570804-59570821,59575831-59575834:+] 0.7806 141 7 -16.54 -1.2181 MIMAT0012833 rno-miR-582 64631 Ube2g1 ucauugaccaacuugUUGACAu |||||| uuuugaauucuaaugAACUGUu 2 8 208 229 [rn4:10:59576001-59576022:+] 0.7712 120 6 -7.77 -0.3198 MIMAT0012845 rno-miR-935 64631 Ube2g1 cgccaucgccuUCG-CCAUUGAcc ||| |||||| guuuauucaauAGCUAGUAACUuc 3 13 2 25 [rn4:10:59570786-59570809:+] 0.7900 123 0 -7.25 -0.1568 MIMAT0012846 rno-miR-201 64631 Ube2g1 uucuuguuacggaAUGACUca |||||| cauuuagcuaaaaUACUGAaa 3 9 604 624 [rn4:10:59576397-59576417:+] 0.5738 120 0 -6.35 -0.2096 MIMAT0012848 rno-miR-294 64631 Ube2g1 ucUAUCCCGGAG-GUAAAACUc | | | :: | |||||||| acAGAUGAUUACGCAUUUUGAa 2 20 193 214 [rn4:10:59575986-59576007:+] 0.7712 146 7 -11.60 -1.0787 MIMAT0012848 rno-miR-294 64631 Ube2g1 ucuaucccgGAGGUAAAACUc :|: ||||||: uucauguaaUUUGAUUUUGGa 2 13 1060 1080 [rn4:10:59576853-59576873:+] 0.7409 128 0 -6.94 -0.2747 MIMAT0012848 rno-miR-294 64631 Ube2g1 ucuaucccggaggUAAAACuc |||||| auuugauuuuggaAUUUUGuc 3 9 1068 1088 [rn4:10:59576861-59576881:+] 0.7409 120 0 -6.52 -0.1132 MIMAT0012849 rno-miR-295 64631 Ube2g1 cuucacacggggugUAAACUca |||||| uauauuuucauguaAUUUGAuu 3 9 1054 1075 [rn4:10:59576847-59576868:+] 0.7409 120 0 -5.02 -0.1201 MIMAT0012850 rno-miR-465 64631 Ube2g1 guGUGGUCGUGGCAAGA-UUUAu ::|||| | ||||| |||| ucUGCCAG-AAAGUUCUCAAAUc 2 21 583 604 [rn4:10:59576376-59576397:+] 0.5738 126 0 -13.63 -1.0895 MIMAT0012851 rno-miR-547 64631 Ube2g1 gagugaauuucuuCAUGGUu |||||| acaaacacaccuuGUACCAa 2 8 310 329 [rn4:10:59576103-59576122:+] 0.7712 120 6 -11.45 -0.2309 MIMAT0012856 rno-miR-759 64631 Ube2g1 caguuuuAACAAACGUGAGAcg || || |||||| ugagucuUUCAUUACACUCUuu 3 16 496 517 [rn4:10:59576289-59576310:+] 0.6654 131 0 -8.26 -0.1116 MIMAT0012859 rno-miR-711 64631 Ube2g1 gaAUGUAGAGAGGGUCCCAGGg | || :| |::|||||||: acUUCACUUAUUUCAGGGUCUc 2 21 21 42 [rn4:10:59570805-59570821,59575831-59575835:+] 0.7806 148 0 -26.25 -0.1180 MIMAT0012860 rno-miR-496 64631 Ube2g1 cucuAACCGGUACAUUAUGAgu || ||:| |||||| ucauUUAGCUA--AAAUACUga 3 19 603 622 [rn4:10:59576396-59576415:+] 0.5738 127 0 -7.61 -0.1546 MIMAT0012860 rno-miR-496 64631 Ube2g1 cucuaaccgguACAUUAUGAgu || |||||| agcuaaaauacUGAAAUACUag 3 12 609 630 [rn4:10:59576402-59576423:+] 0.5738 127 0 -7.16 -0.1318 MIMAT0000575 rno-miR-335 64631 Ube2g1 ugUAAAA-AGCAAUAA----CGAGAACu ||||| | | |:|| ||||||| acAUUUUCUGGCUGUUGAGAGCUCUUGa 2 22 736 763 [rn4:10:59576529-59576556:+] 0.5214 155 7 -19.69 -0.7581 MIMAT0000581 rno-miR-338 64631 Ube2g1 aguUGUUUUAGUGACUACGACcu || |||| | |||||| uguACCAAAU-A---AUGCUGuc 3 21 322 340 [rn4:10:59576115-59576133:+] 0.7712 126 0 -7.01 -0.1757 MIMAT0004650 rno-miR-340-5p 64631 Ube2g1 uuaGUCAGAG-UAACGAAAUAUu || |: | | | :|||||| uucCAUUUACUAAUCUUUUAUAu 2 20 516 538 [rn4:10:59576309-59576331:+] 0.6366 134 6 -3.95 -0.1100 MIMAT0000600 rno-miR-129 64631 Ube2g1 cguucgggucuggcGUUUUUc |||||| guuuuuuaucaguuCAAAAAg 2 8 406 426 [rn4:10:59576199-59576219:+] 0.6654 120 6 -11.33 -0.1586 MIMAT0000606 rno-miR-7a 64631 Ube2g1 uguuguUUUAGUGA-UCAGAAGGu ||| ||:| ||||||:| uccuuuAAACCAUUGAGUCUUUCa 2 18 483 506 [rn4:10:59576276-59576299:+] 0.6654 148 0 -15.31 -0.1141 MIMAT0000606 rno-miR-7a 64631 Ube2g1 uguuguuuuagugaucAGAAGGu |||||| accuuauguagugaguUCUUCCa 2 8 1089 1111 [rn4:10:59576882-59576904:+] 0.7409 120 6 -11.33 -0.1790 MIMAT0000615 rno-miR-101b 64631 Ube2g1 aaGUCGAUAGUGU-CAUGACAu |:| || :|:| |||||| ucCGGAUAAUAUAUAUACUGUu 2 20 277 298 [rn4:10:59576070-59576091:+] 0.7712 126 6 -10.61 -0.1489 MIMAT0000780 rno-miR-7b 64631 Ube2g1 uguuguUUUAGU-GUUCAGAAGGu ||| || ::||||||:| uccuuuAAACCAUUGAGUCUUUCa 2 18 483 506 [rn4:10:59576276-59576299:+] 0.6654 144 0 -12.69 -0.1141 MIMAT0000780 rno-miR-7b 64631 Ube2g1 uguuguuuuaguguucAGAAGGu |||||| accuuauguagugaguUCUUCCa 2 8 1089 1111 [rn4:10:59576882-59576904:+] 0.7409 120 6 -12.31 -0.1790 MIMAT0000781 rno-miR-9 64631 Ube2g1 agUAUGUCGAUCUAUUGGUUUcu | ||| || | | |||||| aaACACACCUUG-U-ACCAAAua 3 22 312 332 [rn4:10:59576105-59576125:+] 0.7712 133 0 -7.73 -0.1747 MIMAT0000782 rno-miR-10a-5p 64631 Ube2g1 guGUUUAAGCCUA-GAUGUCCCAu :|| ||| | :| |||||| agUAACUUCACUUAUUUCAGGGUc 2 22 17 40 [rn4:10:59570801-59570821,59575831-59575833:+] 0.7806 124 6 -12.81 -0.1325 MIMAT0000787 rno-miR-18a 64631 Ube2g1 gauagacgugaucuacGUGGAAu |||||| uguacauccacaaacaCACCUUg 2 8 301 323 [rn4:10:59576094-59576116:+] 0.7712 120 6 -11.67 -0.1537 MIMAT0000787 rno-miR-18a 64631 Ube2g1 gauagacgugaucuacGUGGAAu |||||| gauuuuggaauuuuguCACCUUa 2 8 1072 1094 [rn4:10:59576865-59576887:+] 0.7409 120 6 -12.83 -0.2918 MIMAT0000788 rno-miR-19b 64631 Ube2g1 agucAAAACGUACCUAAA-CGUGu |||| : || ||| |||| uauaUUUUCUUUGUUUUUGGCACa 2 20 534 557 [rn4:10:59576327-59576350:+] 0.6078 123 0 -8.03 -1.0273 MIMAT0000796 rno-miR-26a 64631 Ube2g1 ucggaUAGGACC---UAAUGAACUu || || | ||||||||| cugaaAUACUAGAAAAUUACUUGAu 2 18 619 643 [rn4:10:59576412-59576436:+] 0.5738 152 7 -11.43 -1.1798 MIMAT0000797 rno-miR-26b 64631 Ube2g1 uggauaggacUUAAUGAACUu |||||||||| aauacuagaaAAUUACUUGAu 2 12 623 643 [rn4:10:59576416-59576436:+] 0.5738 155 7 -12.66 -1.1798 MIMAT0000818 rno-miR-96 64631 Ube2g1 ucGUUUUUACA-CGAUCACGGUUu |||:|: | | |||||||| gaCAAGAGCCUAACAAGUGCCAAc 2 22 167 190 [rn4:10:59575960-59575983:+] 0.7712 156 7 -15.83 -1.1401 MIMAT0000823 rno-miR-101a 64631 Ube2g1 aaGUCAAUAGUGU-CAUGACAu |:| || :|:| |||||| ucCGGAUAAUAUAUAUACUGUu 2 20 277 298 [rn4:10:59576070-59576091:+] 0.7712 126 6 -10.59 -0.1489 MIMAT0000824 rno-miR-103 64631 Ube2g1 aguaucGGGACAUG-----UUACGACGa ||:||||| |||||||: aacacaCCUUGUACCAAAUAAUGCUGUc 2 18 313 340 [rn4:10:59576106-59576133:+] 0.7712 140 0 -21.02 -0.1907 MIMAT0000826 rno-miR-107 64631 Ube2g1 acuaucGGGACAUG-----UUACGACGa ||:||||| |||||||: aacacaCCUUGUACCAAAUAAUGCUGUc 2 18 313 340 [rn4:10:59576106-59576133:+] 0.7712 140 0 -21.02 -0.1907 MIMAT0000827 rno-miR-122 64631 Ube2g1 guuuGUGGUAACAGUGUGAGGu :::: ||| |||||||| ucuuUGUUUUUGGCACACUCCc 2 19 541 562 [rn4:10:59576334-59576355:+] 0.6078 158 7 -16.64 -0.3659 MIMAT0000827 rno-miR-122 64631 Ube2g1 guuuguGGUAACAGUGUGAGGu |: | |:||||||: uugaguCUUUCAUUACACUCUu 2 17 495 516 [rn4:10:59576288-59576309:+] 0.6654 132 0 -11.82 -0.1173 MIMAT0004729 rno-miR-125a-3p 64631 Ube2g1 ccgaggguUCUUGG---AGUGGAca :|||:: |||||| uugauuuuGGAAUUUUGUCACCUua 3 15 1070 1094 [rn4:10:59576863-59576887:+] 0.7409 121 0 -11.90 -0.2205 MIMAT0000833 rno-miR-127 64631 Ube2g1 ucgGU-UCGAGUCUG-CCUAGGCu || ||| || || |||||| guaCAUAGCACA-ACAUGAUCCGg 2 20 259 281 [rn4:10:59576052-59576074:+] 0.7712 123 6 -16.56 -0.3055 MIMAT0000838 rno-miR-132 64631 Ube2g1 gcugguaccgacaucUGACAAu |||||| uuugaauucuaaugaACUGUUu 2 8 209 230 [rn4:10:59576002-59576023:+] 0.7712 120 6 -7.94 -0.1590 MIMAT0000838 rno-miR-132 64631 Ube2g1 gcugguaccgacaucUGACAAu |||||| ccggauaauauauauACUGUUc 2 8 278 299 [rn4:10:59576071-59576092:+] 0.7712 120 6 -7.69 -0.2156 MIMAT0000843 rno-miR-137 64631 Ube2g1 gauGCGCAUAA--GAAUUCGUUAUu | :| ||| | ||||||| ucuCUUGGAUUGGAUGUAGCAAUAa 2 21 712 736 [rn4:10:59576505-59576529:+] 0.5697 143 7 -9.23 -0.9115 MIMAT0000850 rno-miR-144 64631 Ube2g1 ucaUGUAGUAGAUAUGACAu |:| :|| |||||||| cggAUAAUAUAUAUACUGUu 2 18 279 298 [rn4:10:59576072-59576091:+] 0.7712 161 7 -11.54 -1.2151 MIMAT0000850 rno-miR-144 64631 Ube2g1 ucauGU-AGUAGA---UAUGACau || |:| || |||||| aaauCAUUUAGCUAAAAUACUGaa 3 17 600 623 [rn4:10:59576393-59576416:+] 0.5738 122 0 -10.13 -0.2006 MIMAT0000852 rno-miR-146a 64631 Ube2g1 uuggguaccuuaagUCAAGAGu ||||||| ucuaucugccagaaAGUUCUCa 2 9 579 600 [rn4:10:59576372-59576393:+] 0.5738 140 7 -14.67 -1.1787 MIMAT0000860 rno-miR-183 64631 Ube2g1 ucaCUUAAGAUGGUCACGGUau ||: : || ||||||| caaGAGCCUAACAAGUGCCAac 3 20 169 190 [rn4:10:59575962-59575983:+] 0.7712 135 0 -15.46 -0.1530 MIMAT0000863 rno-miR-186 64631 Ube2g1 ucggguuuuccucuuAAGAAAc |||||| cuaaucuuuuauauuUUCUUUg 2 8 525 546 [rn4:10:59576318-59576339:+] 0.6366 120 6 -8.01 -0.2179 MIMAT0000865 rno-miR-190 64631 Ube2g1 ugGAU-UAUAUAGU-UUGUA-UAGu ||: | ||| || ||||| ||| acCUGUACAUAGCACAACAUGAUCc 2 21 255 279 [rn4:10:59576048-59576072:+] 0.7712 126 0 -11.44 -1.1378 MIMAT0000868 rno-miR-193 64631 Ube2g1 ugacccugaaacaucCGGUCAa |||||| gcugcaauaaaacauGCCAGUc 2 8 136 157 [rn4:10:59575929-59575950:+] 0.7712 120 6 -11.58 -0.1420 MIMAT0000872 rno-miR-199a-5p 64631 Ube2g1 cuUGUCCAUCAGACUUGU-GACCc ||||| ||| ||| |||| cuACAGGCUUUCU--ACAUCUGGg 2 22 927 948 [rn4:10:59576720-59576741:+] 0.5361 122 0 -21.25 -0.5189 MIMAT0000876 rno-miR-203 64631 Ube2g1 gaucaCCAGGAUUUGUAAAGUg | |::| | || |||| ucaucGUUUUUUAUCAGUUCAa 2 18 401 422 [rn4:10:59576194-59576215:+] 0.6654 121 0 -5.89 -0.1419 MIMAT0000883 rno-miR-212 64631 Ube2g1 accggcacugaccucUGACAAu |||||| uuugaauucuaaugaACUGUUu 2 8 209 230 [rn4:10:59576002-59576023:+] 0.7712 120 6 -6.98 -0.1590 MIMAT0000883 rno-miR-212 64631 Ube2g1 accggcacugaccucUGACAAu |||||| ccggauaauauauauACUGUUc 2 8 278 299 [rn4:10:59576071-59576092:+] 0.7712 120 6 -9.49 -0.2156 MIMAT0000888 rno-miR-218 64631 Ube2g1 uguaccaaucuaguUCGUGUu |||||| aaagaccuguacauAGCACAa 2 8 251 271 [rn4:10:59576044-59576064:+] 0.7712 120 6 -10.24 -0.2050 MIMAT0000890 rno-miR-221 64631 Ube2g1 cuuUGGGUCGUCUG--UUACAUCGa |:|: ::||: :||||||| cccAUCUCUUGGAUUGGAUGUAGCa 2 21 708 732 [rn4:10:59576501-59576525:+] 0.5697 147 7 -14.13 -0.6385 MIMAT0000890 rno-miR-221 64631 Ube2g1 cuUUGGGUC-GUCUGUUACAUCGa ||::: | || : ||||||: ggAAUUUUGUCACCUUAUGUAGUg 2 22 1078 1101 [rn4:10:59576871-59576894:+] 0.7409 132 0 -10.06 -0.1229 MIMAT0000891 rno-miR-222 64631 Ube2g1 ugggucAUC-GGUCUACAUCGa |:| :::|||||||| aucucuUGGAUUGGAUGUAGCa 2 16 711 732 [rn4:10:59576504-59576525:+] 0.5697 150 7 -16.21 -0.6385 MIMAT0000891 rno-miR-222 64631 Ube2g1 uggguCAUCGGUCUACAUCGa || || ||||||: auuuuGUCACCUUAUGUAGUg 2 17 1081 1101 [rn4:10:59576874-59576894:+] 0.7409 132 0 -10.76 -0.1229 MIMAT0003117 rno-miR-361 64631 Ube2g1 caugGGGACCUCUA-AGACUAUu |||| || | ||||||| uuugCCCUUAAGUUGUCUGAUAu 2 19 876 898 [rn4:10:59576669-59576691:+] 0.5046 157 7 -18.83 -0.5714 MIMAT0003122 rno-miR-370 64631 Ube2g1 uugguccaaggUGGGGUCGUCCg ||:::|||||| aauucuaaaagACUUUAGCAGGu 2 13 365 387 [rn4:10:59576158-59576180:+] 0.7337 136 6 -18.07 -0.2519 MIMAT0003176 rno-miR-539 64631 Ube2g1 uguguGGUUCCUAUUAAAGAGg :||| | :||||||: ucaguUCAA-AAAGAUUUCUUa 2 18 414 434 [rn4:10:59576207-59576227:+] 0.6654 131 0 -8.14 -0.1389 MIMAT0003179 rno-miR-542-3p 64631 Ube2g1 aaagucAAUAGUUAGACAGUGu ||: | |:|||||| uugauuUUGGAAUUUUGUCACc 2 17 1070 1091 [rn4:10:59576863-59576884:+] 0.7409 136 6 -9.54 -0.3426 MIMAT0003179 rno-miR-542-3p 64631 Ube2g1 aaagUCAAUAGUUA-GA-CAGUGu || | |::|| || ||||| ugagAGCUCUUGAUCCUAGUCACu 2 19 751 774 [rn4:10:59576544-59576567:+] 0.5214 121 0 -7.27 -0.3618 MIMAT0003199 rno-miR-381 64631 Ube2g1 cucucgaacgGGAACAUau ||||||| cacaaacacaCCUUGUAcc 3 10 309 327 [rn4:10:59576102-59576120:+] 0.7712 125 0 -9.07 -0.1567 MIMAT0003199 rno-miR-381 64631 Ube2g1 cucucgaACG--GGAACAUau ||| :|||||| caaauaaUGCUGUCUUGUAgu 3 13 327 347 [rn4:10:59576120-59576140:+] 0.7712 123 0 -9.67 -0.1142 MIMAT0003201 rno-miR-382 64631 Ube2g1 gcUUAGGUGGUGC-UUGUUGAAg |: |:| || | : |||||| agAGCCUAACAAGUGCCAACUUa 2 21 171 193 [rn4:10:59575964-59575986:+] 0.7712 123 6 -11.34 -0.1465 MIMAT0003381 rno-miR-499 64631 Ube2g1 uuUGUAGUGACGUUCAGAAuu | | ||:|| |||||| uuAAACCAUUG--AGUCUUuc 3 20 487 505 [rn4:10:59576280-59576298:+] 0.6654 132 0 -11.51 -0.1135 MIMAT0003381 rno-miR-499 64631 Ube2g1 uuUGUAGUG-ACGUUCAG-AAUu |:| || ||| |||| ||| caAUAAAACAUGCCAGUCAUUAa 2 20 140 162 [rn4:10:59575933-59575955:+] 0.7712 122 0 -12.33 -0.9238 MIMAT0005300 rno-miR-182 64631 Ube2g1 gccacaCUCAAGAUGGUAACGGUUu ||| : || | |||||| ugacaaGAGCCUAACAAGUGCCAAc 2 20 166 190 [rn4:10:59575959-59575983:+] 0.7712 127 6 -13.54 -0.1870 MIMAT0005302 rno-miR-190b 64631 Ube2g1 uuggAU-UAUAGU-UUGUA-UAGu || ||| || ||||| ||| ccugUACAUAGCACAACAUGAUCc 2 18 256 279 [rn4:10:59576049-59576072:+] 0.7712 123 0 -8.23 -1.1378 MIMAT0005311 rno-miR-410 64631 Ube2g1 uguccgguagacacAAUAUAa |||||| cauuuacuaaucuuUUAUAUu 2 8 519 539 [rn4:10:59576312-59576332:+] 0.6366 120 6 -6.16 -0.1240 MIMAT0005320 rno-miR-495 64631 Ube2g1 uucuucacgugguacAAACAAa |||||| aucuuuuauauuuucUUUGUUu 2 8 528 549 [rn4:10:59576321-59576342:+] 0.6366 120 6 -5.02 -0.1178 MIMAT0005341 rno-miR-488 64631 Ube2g1 cugguucuuugUCGGAAAGUu ||:|||||| uuaaaccauugAGUCUUUCAu 2 11 487 507 [rn4:10:59576280-59576300:+] 0.6654 134 6 -14.67 -0.1008 MIMAT0005595 rno-miR-146b 64631 Ube2g1 ugucGGAU--ACCUUAAGUCAAGAGu :||| || | ||||||| cucuUCUAUCUGCCAGAAAGUUCUCa 2 21 575 600 [rn4:10:59576368-59576393:+] 0.5738 143 7 -15.05 -1.1787

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G101583 Ube2g1 Rattus norvegicus 64631

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Ube2g1; Ubc7; Ube2g rno-let-7i 922 946 -UGUCG-UGUUUGAU-GAUGGAGU :|||| |||::|| |||| || CGCAGCUACAGGCUUUCUACAUCU Ube2g1; Ubc7; Ube2g rno-miR-103 314 341 AGUAUCGGGACAUG-----UUACGACGA || ||:||||| |||||||: ACACA-CCUUGUACCAAAUAAUGCUGUC Ube2g1; Ubc7; Ube2g rno-miR-106b 57 78 UAGACGUGACAGU-----CGUGAAAU |||||||: ||||| ---GGCACUGUUUUUCCUGCACUC-- Ube2g1; Ubc7; Ube2g rno-miR-107 318 341 ACUAUCGGGACAUG-----UUACGACGA ||:||||| |||||||: -----ACCUUGUACCAAAUAAUGCUGUC Ube2g1; Ubc7; Ube2g rno-miR-10a 921 950 -GUGUUUAAG-CCU--AGAUGU---CCCAU |:||: || |||||| ||| GCGCAGCUACAGGCUUUCUACAUCUGGGA- Ube2g1; Ubc7; Ube2g rno-miR-10b 920 950 -UGUGUUUAAG-CC--AAGAUGU---CCC- :|:||: || ||||||| ||| UGCGCAGCUACAGGCUUUCUACAUCUGGGA Ube2g1; Ubc7; Ube2g rno-miR-122a 52 81 -UGU-UUGUGGUAACAG---UGUGAGGU- ||| ::|||::|| |: :|||||:| AACAUGGCACUGUUUUUCCUGCACUCUAC Ube2g1; Ubc7; Ube2g rno-miR-124a 666 688 ACCGUAAGUGGCGCACGGAAUU ||: ||||: ||||:||: GGGUCAUCACUAGGUGCUUUGU Ube2g1; Ubc7; Ube2g rno-miR-128a 658 683 UUUUCUCUGGCCA---AGUGA--CACU ||||:: || ||||| ||| --CAGAGGUGGGGUCAUCACUAGGUGC Ube2g1; Ubc7; Ube2g rno-miR-128b 658 683 CUUUCUCUGGCCA---AGUGA--CACU ||||:: || ||||| ||| --CAGAGGUGGGGUCAUCACUAGGUGC Ube2g1; Ubc7; Ube2g rno-miR-129 123 144 -UCGUUCG-GGUCUGGCGUUUUUC :|| :| |::|:|:|||| UGGCUGGAACUGGGCUGCAAU--- Ube2g1; Ubc7; Ube2g rno-miR-134 119 161 GGGAGACCA-------------GU---------UGGUCAGUGU |||||| || :|||||||: -ACUCUGGCUGGAACUGGGCUGCAAUAAAACAUGCCAGUCAUU Ube2g1; Ubc7; Ube2g rno-miR-139 52 66 UCUGUGCACGUGACAUCU |||:| ||||||| -AACAUG-GCACUGUU-- Ube2g1; Ubc7; Ube2g rno-miR-143 922 949 AC-UCGAUGUCACGAA----GUAGAGU- | |||||||| |||| ||||| : CGCAGCUACAG-GCUUUCUACAUCUGGG Ube2g1; Ubc7; Ube2g rno-miR-145 113 139 UUCCCUAA-GGACCC-UUUUGACCUG- || :|||| ::||||||:| -UGGCAAACUCUGGCUGGAACUGGGCU Ube2g1; Ubc7; Ube2g rno-miR-16 149 171 -GCGGUUAUAAAUGCACGAC-GAU :||||:| ||| ||||| | AUGCCAGUCAUUAA-UGCUGACA- Ube2g1; Ubc7; Ube2g rno-miR-181a 702 730 -UGAGUGGCUG-----UCGCAACUUACAA |:||||| |: :| |||:|||| GAUUCACCCAUCUCUUGGA-UUGGAUGUA Ube2g1; Ubc7; Ube2g rno-miR-181b 707 730 -GGGUGGCU-GUCGUUACUUACAA ||||:| ::| ||:|||| ACCCAUCUCUUGGAU-UGGAUGUA Ube2g1; Ubc7; Ube2g rno-miR-194 936 962 -AGGUGU--ACCUCAACGACAAUGU- ||:||| |||: ||||| ||||| UUCUACAUCUGGGAUUGCUAUUACAA Ube2g1; Ubc7; Ube2g rno-miR-199a 928 950 CUUGUCCAUCAGACUUGU-GACCC- ||||| ||| ||| ||||| -UACAGGCUUUCU--ACAUCUGGGA Ube2g1; Ubc7; Ube2g rno-miR-216 921 954 -GUGUCAA----CGGUC------GACUCUAAU- |:||| ||: |||:||||: GCGCAGCUACAGGCUUUCUACAUCUGGGAUUGC Ube2g1; Ubc7; Ube2g rno-miR-221 706 733 CUUUGGGUCG----UCUG--UUACAUCGA ||||| | :||: :||||||| --CACCCAUCUCUUGGAUUGGAUGUAGCA Ube2g1; Ubc7; Ube2g rno-miR-222 706 733 CUCUGGGUC----AUC-GGUCUACAUCGA ||||| |:| :::|||||||| --CACCCAUCUCUUGGAUUGGAUGUAGCA Ube2g1; Ubc7; Ube2g rno-miR-24 120 140 GACAAGGACGA-CUUGACUCGGU ||: ||| ||||||:||: ---CUCUGGCUGGAACUGGGCUG Ube2g1; Ubc7; Ube2g rno-miR-25 120 145 -AGUCUGGCUCUG-UUC-ACGUUAC || |:|:|: || ::| |||||| CUCUGGCUGGAACUGGGCUGCAAUA Ube2g1; Ubc7; Ube2g rno-miR-26b 608 644 -UUGGAUAG--GACU-----------UAAUGAACUU |:|: |||| ||||||||| UAGCUAAAAUACUGAAAUACUAGAAAAUUACUUGAU Ube2g1; Ubc7; Ube2g rno-miR-28 741 763 GAGUUAUCUGACA---CUCGAGGAA || |:|||| ||||||:| UUCU---GGCUGUUGAGAGCUCUUG Ube2g1; Ubc7; Ube2g rno-miR-292-3p 106 135 -UGUGA----GUUUUGGACCG-CCGUGAA ||| |||| :||||| || ||| AACAAGUUGGCAAACUCUGGCUGGAACUG Ube2g1; Ubc7; Ube2g rno-miR-296 659 672 UGUCCUAACUCCCCCCCGGGA |||| ||||:| -------AGAGGUGGGGUCA- Ube2g1; Ubc7; Ube2g rno-miR-30a-3p 114 133 CGACGUUUGUAGGCUGACUUUC |||||| ||:|:|||:|| --GGCAAAC-UCUGGCUGGAAC Ube2g1; Ubc7; Ube2g rno-miR-324-5p 705 730 UGUGGUUACGGGAUCC--CCUACGC |||| || :|:|:| |||||: UCACCCAUCUCUUGGAUUGGAUGUA Ube2g1; Ubc7; Ube2g rno-miR-328 647 673 -UGCCUUCCC-GUCUC--UCCCGGUC ||| ||||| :|||:|| CACGAUGACUUCAGAGGUGGGGUCAU Ube2g1; Ubc7; Ube2g rno-miR-335 735 765 -UGUAAAAA----GCAAUAA-CGAGAACU- ||||||| :|||: |||||||| AACAUUUUCUGGCUGUUGAGAGCUCUUGAU Ube2g1; Ubc7; Ube2g rno-miR-345 646 676 CGUGAC-CUGAU-------CCCCAGUCGU- ||| |||| ||||||| || UCACGAUGACUUCAGAGGUGGGGUCAUCAC Ube2g1; Ubc7; Ube2g rno-miR-349 658 685 -UCUCCAAUUCU---GUCGUCC-CGAC |||||| ::| || :||| ||| CAGAGGUGGGGUCAUCACUAGGUGCUU Ube2g1; Ubc7; Ube2g rno-miR-361 876 899 CAUGGGGACCUCUA-AGACUAUU | |||| || ||||||| UUUGCCCUUAAGUUGUCUGAUAU Ube2g1; Ubc7; Ube2g rno-miR-363-5p 692 712 UUUAACGU-AGCACUAGGUGGGC |||:| || ||||:||||| --UUUGUACUC-UGAUUCACCCA Ube2g1; Ubc7; Ube2g rno-miR-370 355 389 -UUGGUCCA----AGG-----UGGGGUCGUCCG- ||:|: || ||: ||:::||||||: GAAUCGUGUAAAUUCUAAAAGACUUUAGCAGGUU Ube2g1; Ubc7; Ube2g rno-miR-422b 809 826 CGGAAGACUGAGGUUCAGGUCA |||| :||:||||:|| ---GUCUG-UUCUAAGUUCAU- Ube2g1; Ubc7; Ube2g rno-miR-449 150 190 -UGGU---------CGAUUGUUA------UGUG-ACGGU- :||| |||:|||| ||| ||||| UGCCAGUCAUUAAUGCUGACAAGAGCCUAACAAGUGCCAA Ube2g1; Ubc7; Ube2g rno-miR-92 123 146 GUCCGGCCCUG-UUC-ACGUUAU- |||:|| || ::| ||||||| -UGGCUGGAACUGGGCUGCAAUAA Ube2g1; Ubc7; Ube2g rno-miR-93 254 271 GAUGGACGUGCUUGUCGUGAAAC |||||:|| |:||||| -GACCUGUAC--AUAGCACA--- Ube2g1; Ubc7; Ube2g rno-miR-96 138 191 UCGUUUU----UAC-----------ACGA---------------UCACGGUUU |||| ||| |||| |||||||| UGCAAUAAAACAUGCCAGUCAUUAAUGCUGACAAGAGCCUAACAAGUGCCAAC Ube2g1; Ubc7; Ube2g rno-let-7i 923 945 uGUCG-UGUUUG-AUGAUGGAGu |||| |||::| | |||| || gCAGCTACAGGCTTTCTACATCt Ube2g1; Ubc7; Ube2g rno-miR-106b 54 79 uagaCGUGACA-----GUCGUGAAAU ||||||| | ||||| || catgGCACTGTTTTTCCTGCACTCTA Ube2g1; Ubc7; Ube2g rno-miR-107 313 340 acuaucGGGACAUG-----UUACGACga ||:||||| ||||||| aacacaCCTTGTACCAAATAATGCTGtc Ube2g1; Ubc7; Ube2g rno-miR-10a 914 936 guguuUAAGCCUAGAUGUCCCAu || || | ||||||| | atagcATGCGCAGCTACAGGCTt Ube2g1; Ubc7; Ube2g rno-miR-10b 912 934 UGUGUU-UAAGCCAAGAUGUCCc |:|:|: || || ||||||| ATATAGCATGCGCAGCTACAGGc Ube2g1; Ubc7; Ube2g rno-miR-122a 540 562 uguuugugguAACAGUGUGAGGu ||| |||||||| ttctttgtttTTGGCACACTCCc Ube2g1; Ubc7; Ube2g rno-miR-122a 53 79 UGU-UUGUGGUAACA---GUGUGAGGU ||| ::|||::|| | ::|||||:| ACATGGCACTGTTTTTCCTGCACTCTA Ube2g1; Ubc7; Ube2g rno-miR-124a 664 687 ACCGUA--AGUGGCGCACGGAAuu ||| :| ||||: ||||:|| TGGGGTCATCACTAGGTGCTTTgt Ube2g1; Ubc7; Ube2g rno-miR-128a 656 682 uuuUCUCUG-GCCA--AGUGA--CACu ||||:: ||| ||||| ||| ttcAGAGGTGGGGTCATCACTAGGTGc Ube2g1; Ubc7; Ube2g rno-miR-128b 656 682 cuuUCUCUG-GCCA--AGUGA--CACu ||||:: ||| ||||| ||| ttcAGAGGTGGGGTCATCACTAGGTGc Ube2g1; Ubc7; Ube2g rno-miR-129 124 146 uCGUUC-GGGUCUGGCGUUUUUc || :| |::|:|:|||| || gGCTGGAACTGGGCTGCAATAAa Ube2g1; Ubc7; Ube2g rno-miR-134 139 160 gggagaccaGU-UGGUCAGUgu || :||||||| gcaataaaaCATGCCAGTCAtt Ube2g1; Ubc7; Ube2g rno-miR-139 49 67 UCUGUGCA-CGUGACAucu ||| || | ||||||| AGAAACATGGCACTGTttt Ube2g1; Ubc7; Ube2g rno-miR-143 923 947 acUCGAUGUC---ACGAAGUAGAgu |||||||| | || ||||| gcAGCTACAGGCTTTCTACATCTgg Ube2g1; Ubc7; Ube2g rno-miR-145 112 137 uuCCCUAAG-GACC-CUUUUGACCUG || | | |||| ::||||||:| ttGGCAAACTCTGGCTGGAACTGGGC Ube2g1; Ubc7; Ube2g rno-miR-16 150 170 gCGGUUAUAAAUGCACGACgau ||||:| ||| ||||| tGCCAGTCATTA-ATGCTGaca Ube2g1; Ubc7; Ube2g rno-miR-181a 703 729 UGAGUGGCUGUCG---C-AACUUACAa |:||||| |: | | |||:|||| ATTCACCCATCTCTTGGATTGGATGTa Ube2g1; Ubc7; Ube2g rno-miR-181b 708 729 GGGUGGCUGUCGUUACUUACAa ||||:| : | | ||:|||| CCCATCTCTTGGATTGGATGTa Ube2g1; Ubc7; Ube2g rno-miR-194 937 960 AGGUGU--ACCUCAACGACAAUGU ||:||| |||: ||||| ||||| TCTACATCTGGGATTGCTATTACA Ube2g1; Ubc7; Ube2g rno-miR-199a 927 948 cuUGUCCAUCAGACUUGU-GACCC ||||| ||| ||| ||||| ctACAGGCTTTCT--ACATCTGGG Ube2g1; Ubc7; Ube2g rno-miR-216 928 952 gUGUC--AACG--GUCGACUCUAAu |||| || | || |||:|||| tACAGGCTTTCTACATCTGGGATTg Ube2g1; Ubc7; Ube2g rno-miR-221 704 732 cuuUGGGUCG----UCUG--UUACAUCGa ||||| | :||: :||||||| ttcACCCATCTCTTGGATTGGATGTAGCa Ube2g1; Ubc7; Ube2g rno-miR-222 704 732 cucUGGGU----CAUC-GGUCUACAUCGa ||||| |:| :::|||||||| ttcACCCATCTCTTGGATTGGATGTAGCa Ube2g1; Ubc7; Ube2g rno-miR-24 117 139 gacaAGGACGA-CUUGACUCGgu ||: ||| ||||||:|| aaacTCTGGCTGGAACTGGGCtg Ube2g1; Ubc7; Ube2g rno-miR-25 121 144 AGUCUGGCUCUG-UUC-ACGUUAc || |:|:|: || ::| |||||| TCTGGCTGGAACTGGGCTGCAATa Ube2g1; Ubc7; Ube2g rno-miR-28 738 762 gaguuauCUGACA---CUCGAGGAa |:|||| ||||||:| attttctGGCTGTTGAGAGCTCTTg Ube2g1; Ubc7; Ube2g rno-miR-292-3p 111 134 ugugaGUUUUGGACC-GCCGUGAa |||| :|||| :|| ||| gttggCAAACTCTGGCTGGAACTg Ube2g1; Ubc7; Ube2g rno-miR-296 648 672 UG-UCCU-AA--CUCCCCCCCGGga || | || || |||| ||||:| ACGATGACTTCAGAGGTGGGGTCat Ube2g1; Ubc7; Ube2g rno-miR-30a-3p 111 132 CGA-CGUUUGUAGGCUGACUUUc |:| |||||| ||:|:|||:|| GTTGGCAAAC-TCTGGCTGGAAc Ube2g1; Ubc7; Ube2g rno-miR-328 649 672 ugccuucccGUCUC--UCCCGGUc ||||| :|||:|| cgatgacttCAGAGGTGGGGTCAt Ube2g1; Ubc7; Ube2g rno-miR-330 660 687 agagACGUCCGG----GA--CACGAAACg || :||:| || |||||||| gaggTG-GGGTCATCACTAGGTGCTTTGt Ube2g1; Ubc7; Ube2g rno-miR-335 736 763 UGUAAAA-AGCAAUAA----CGAGAACU ||||||| | | |:|| |||||||| ACATTTTCTGGCTGTTGAGAGCTCTTGA Ube2g1; Ubc7; Ube2g rno-miR-344 112 133 ugCCAGUCCGAAACCGAUCUAGu || || || |||||:|| | ttGG-CAAACTCTGGCTGGAACt Ube2g1; Ubc7; Ube2g rno-miR-345 652 674 cgUGA--CCUGAUCCCCAGUCGU ||| || ||||||| || tgACTTCAGAGGTGGGGTCATCA Ube2g1; Ubc7; Ube2g rno-miR-349 659 684 UCUCCAAUUC--U-GUCGUCC-CGAc |||||| ::| | || :||| ||| AGAGGTGGGGTCATCACTAGGTGCTt Ube2g1; Ubc7; Ube2g rno-miR-361 876 898 caugGGGACCUCUA-AGACUAUu |||| || | ||||||| tttgCCCTTAAGTTGTCTGATAt Ube2g1; Ubc7; Ube2g rno-miR-363-5p 690 711 uuuAACGUAGCACUAGGUGGGc |||:| : ||||:||||| tttTTGTACTCTGATTCACCCa Ube2g1; Ubc7; Ube2g rno-miR-370 356 387 UUGGUCC----AAGG-----UGGGGUCGUCCg ||:|: | |||: ||:::|||||| AATCGTGTAAATTCTAAAAGACTTTAGCAGGt Ube2g1; Ubc7; Ube2g rno-miR-422b 806 826 cggaAGACUGAGGUUCAGGUca |||| :||:||||:|| aaagTCTG-TTCTAAGTTCAtc Ube2g1; Ubc7; Ube2g rno-miR-449 131 154 UGG-UCGA--UUGUUAUGUGACGGU ||: :||| ||:|| ||| ||||| ACTGGGCTGCAATAAAACA-TGCCA Ube2g1; Ubc7; Ube2g rno-miR-92 122 144 GUCCGGCCCUG-UUC-ACGUUAU | |||:|| || ::| ||||||| CTGGCTGGAACTGGGCTGCAATA Ube2g1; Ubc7; Ube2g rno-miR-93 253 273 gaUGGACGUGCUUGUCGUGaaac |||||:|| |:||||| agACCTGTAC--ATAGCACaaca Ube2g1; Ubc7; Ube2g rno-miR-96 167 190 ucGUUUUUACA-CGAUCACGGUUu |||:|: | | |||||||| gaCAAGAGCCTAACAAGTGCCAAc Ube2g1; Ubc7; Ube2g rno-miR-10b 927 934 --------------------UGUGUUUAA-GCCAAGAUGUCCC |:|:|: || ||||||| CUGAUAUUAAGGUUGGAUGAAUAUAGCAUGCGCAGCUACAGGC Ube2g1; Ubc7; Ube2g rno-miR-122a 555 562 UGUUUGUGGU--------------------AACAGUGUGAGGU ||| |||||||| AUUUACUAAUCUUUUAUAUUUUCUUUGUUUUUGGCACACUCCC Ube2g1; Ubc7; Ube2g rno-miR-221 725 732 CUU--------------UGGGUCG----UCUG--UUACAUCGA ||||| | :||: :||||||| UUUUUGUACUCUGAUUCACCCAUCUCUUGGAUUGGAUGUAGCA Ube2g1; Ubc7; Ube2g rno-miR-222 725 732 CUC--------------UGGGUC----AUC-GGUCUACAUCGA ||||| |:| : |||||||| UUUUUGUACUCUGAUUCACCCAUCUCUUGGAUUGGAUGUAGCA Ube2g1; Ubc7; Ube2g rno-miR-26b 636 643 --------UUGGAUAG--GAC-----------UUAAUGAACUU |:|: ||| |||||||||| AAUCAUUUAGCUAAAAUACUGAAAUACUAGAAAAUUACUUGAU Ube2g1; Ubc7; Ube2g rno-miR-330 680 687 A----------GAGA---CGUCCGGGA-------CACGAAACG :|| | || :| ||||||||: UUCACGAUGACUUCAGAGGUGGGGUCAUCACUAGGUGCUUUGUC Ube2g1; Ubc7; Ube2g rno-miR-335 756 763 ---------------UGUAAAAAGCA-AUAA----CGAGAACU ||||||| :| |:|| |||||||| UUGGAUGUAGCAAUAACAUUUUCUGGCUGUUGAGAGCUCUUGAU Ube2g1; Ubc7; Ube2g rno-miR-361 891 898 C---------------------AUGGGGACCUCUA-AGACUAUU |:|||:| || ||||||| AAUCCAGAUUUGGUUUUAUUUUUGCCCUUA-AGUUGUCUGAUAU Ube2g1; Ubc7; Ube2g rno-miR-96 183 190 ------UC-GUUUUUAC-ACGA------------UCACGGUUU || || |||| || |||||||| CAUGCCAGUCAUUAAUGCUGACAAGAGCCUAACAAGUGCCAAC

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Ube2g1 RAID00012233 rno-miR-148a-5p miRNA MIMAT0035724 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID00056673 rno-miR-92a-3p miRNA MIMAT0000816 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID00078859 rno-miR-340-5p miRNA MIMAT0004650 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID00110226 rno-miR-10a-5p miRNA MIMAT0000782 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID00196605 rno-miR-361-5p miRNA MIMAT0003117 Ube2g1 mRNA 64631 Prediction 0.2202 Ube2g1 RAID00218892 rno-miR-3084a-5p miRNA MIMAT0035739 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID00238109 rno-miR-370-3p miRNA MIMAT0003122 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID00240563 rno-miR-9a-5p miRNA MIMAT0000781 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID00317961 rno-miR-551b-5p miRNA MIMAT0017335 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID00336972 rno-miR-542-3p miRNA MIMAT0003179 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID00494301 rno-miR-132-3p miRNA MIMAT0000838 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID00529224 rno-miR-26b-5p miRNA MIMAT0000797 Ube2g1 mRNA 64631 Prediction 0.2202 Ube2g1 RAID00556775 rno-miR-493-5p miRNA MIMAT0017217 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID00595737 rno-miR-222-3p miRNA MIMAT0000891 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID00613938 rno-miR-92b-3p miRNA MIMAT0005340 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID00745401 rno-miR-183-5p miRNA MIMAT0000860 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID00802043 rno-miR-539-5p miRNA MIMAT0003176 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID00879655 rno-miR-203b-3p miRNA MIMAT0017800 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID00940355 rno-miR-421-3p miRNA MIMAT0017175 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID01058673 rno-miR-495 miRNA MIMAT0005320 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID01246537 rno-miR-3570 miRNA MIMAT0017850 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID01337300 rno-miR-325-3p miRNA MIMAT0004639 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID01353822 rno-miR-330-3p miRNA MIMAT0000568 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID01393830 rno-miR-7a-5p miRNA MIMAT0000606 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID01419711 rno-miR-504 miRNA MIMAT0012830 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID01447229 rno-miR-150-3p miRNA MIMAT0017133 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID01476741 rno-miR-190b-5p miRNA MIMAT0005302 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID01487795 rno-miR-218a-5p miRNA MIMAT0000888 Ube2g1 mRNA 64631 Prediction 0.2202 Ube2g1 RAID01519172 rno-miR-125a-3p miRNA MIMAT0004729 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID01680881 rno-miR-190a-5p miRNA MIMAT0000865 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID01738009 rno-miR-212-3p miRNA MIMAT0000883 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID01942446 rno-miR-193a-3p miRNA MIMAT0000868 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID01945011 rno-miR-466b-2-3p miRNA MIMAT0017286 Ube2g1 mRNA 64631 Prediction 0.2202 Ube2g1 RAID02029962 rno-miR-336-3p miRNA MIMAT0017034 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID02070691 rno-miR-871-3p miRNA MIMAT0017289 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID02075869 rno-miR-410-3p miRNA MIMAT0005311 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID02105055 rno-miR-466b-4-3p miRNA MIMAT0037262 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID02145892 rno-miR-3542 miRNA MIMAT0017796 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID02167956 rno-miR-32-5p miRNA MIMAT0000811 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID02178157 rno-miR-146b-5p miRNA MIMAT0005595 Ube2g1 mRNA 64631 Prediction 0.2202 Ube2g1 RAID02223659 rno-miR-449c-3p miRNA MIMAT0017804 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID02261611 rno-miR-26a-5p miRNA MIMAT0000796 Ube2g1 mRNA 64631 Prediction 0.2202 Ube2g1 RAID02326891 rno-miR-221-3p miRNA MIMAT0000890 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID02343176 rno-miR-182 miRNA MIMAT0005300 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID02361070 rno-miR-335 miRNA MIMAT0000575 Ube2g1 mRNA 64631 Prediction 0.2202 Ube2g1 RAID02377948 rno-miR-382-5p miRNA MIMAT0003201 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID02395528 rno-miR-3595 miRNA MIMAT0017903 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID02441035 rno-miR-381-3p miRNA MIMAT0003199 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID02468073 rno-let-7c-1-3p miRNA MIMAT0017087 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID02514030 rno-miR-547-3p miRNA MIMAT0012851 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID02539096 rno-miR-30d-3p miRNA MIMAT0004722 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID02543115 rno-miR-203a-3p miRNA MIMAT0000876 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID02558864 rno-miR-103-3p miRNA MIMAT0000824 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID02580252 rno-miR-18a-5p miRNA MIMAT0000787 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID02629023 rno-miR-146a-5p miRNA MIMAT0000852 Ube2g1 mRNA 64631 Prediction 0.2202 Ube2g1 RAID02641688 rno-miR-96-5p miRNA MIMAT0000818 Ube2g1 mRNA 64631 Prediction 0.2381 Ube2g1 RAID02686244 rno-miR-30e-3p miRNA MIMAT0004720 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID02690133 rno-miR-294 miRNA MIMAT0012848 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID02737425 rno-miR-199a-5p miRNA MIMAT0000872 Ube2g1 mRNA 64631 Reporter Assay//Prediction 0.7802 Ube2g1 RAID02792337 rno-miR-101b-3p miRNA MIMAT0000615 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID02923530 rno-miR-137-3p miRNA MIMAT0000843 Ube2g1 mRNA 64631 Prediction 0.2381 Ube2g1 RAID02963884 rno-miR-499-5p miRNA MIMAT0003381 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID02976072 rno-miR-101a-3p miRNA MIMAT0000823 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID03029423 rno-miR-488-3p miRNA MIMAT0005341 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID03039630 rno-miR-144-3p miRNA MIMAT0000850 Ube2g1 mRNA 64631 Prediction 0.2202 Ube2g1 RAID03375052 rno-miR-129-5p miRNA MIMAT0000600 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID03380703 rno-miR-1896 miRNA MIMAT0035732 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID03401904 rno-miR-7b miRNA MIMAT0000780 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID03608345 rno-miR-148b-5p miRNA MIMAT0004645 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID03627976 rno-miR-107-3p miRNA MIMAT0000826 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID03668282 rno-miR-186-5p miRNA MIMAT0000863 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID03754545 rno-miR-30a-3p miRNA MIMAT0000809 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID03870179 rno-miR-338-3p miRNA MIMAT0000581 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID03972094 rno-miR-127-3p miRNA MIMAT0000833 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID03975338 rno-miR-122-5p miRNA MIMAT0000827 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID03997425 rno-miR-19b-3p miRNA MIMAT0000788 Ube2g1 mRNA 64631 Prediction 0.1828 Ube2g1 RAID04008914 rno-miR-206-5p miRNA MIMAT0017154 Ube2g1 mRNA 64631 Prediction 0.1828