DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000603 rno-miR-20a* 303419 Cuedc1 acauuCACGAG-CAUUACGUCa |||| | | ||||||| gguucGUGCACAGAAAUGCAGg 2 17 271 292 [rn4:10:76488084-76488105:+] 0.5279 155 7 -17.18 -0.1669 MIMAT0005285 rno-miR-877 303419 Cuedc1 gggacgcGGUAGAGGAGAUg |:: |||||||| uuguaguCUGGCUCCUCUAu 2 14 248 267 [rn4:10:76488061-76488080:+] 0.5279 149 7 -21.02 -0.1468 MIMAT0005289 rno-miR-881 303419 Cuedc1 agauaagucuuuaCGGUGUCAa |||||||| ucaggcuucuucaGCCACAGUc 2 10 116 137 [rn4:10:76487929-76487950:+] 0.5279 145 7 -16.41 -0.1844 MIMAT0000801 rno-miR-29b 303419 Cuedc1 uugugacuaaaGUUUACCACGAu |::|||||||| ugcagccuagaCGGAUGGUGCUu 2 13 81 103 [rn4:10:76487894-76487916:+] 0.5279 152 7 -19.11 -0.1164 MIMAT0000802 rno-miR-29a 303419 Cuedc1 auuggcuaaaGUCUACCACGAu |:||||||||| gcagccuagaCGGAUGGUGCUu 2 13 82 103 [rn4:10:76487895-76487916:+] 0.5279 156 7 -23.16 -0.1164 MIMAT0000803 rno-miR-29c 303419 Cuedc1 auuggcuaaaGUUUACCACGAu |::|||||||| gcagccuagaCGGAUGGUGCUu 2 13 82 103 [rn4:10:76487895-76487916:+] 0.5279 152 7 -20.67 -0.1164 MIMAT0000814 rno-miR-34c 303419 Cuedc1 cgUUA-GUC-GAUUGAUGUGACGGa |:| ||| |||:| ||||||| acAGUCCAGCCUAGC--CACUGCCg 2 22 132 154 [rn4:10:76487945-76487967:+] 0.5279 156 7 -24.82 -0.1931 MIMAT0000815 rno-miR-34a 303419 Cuedc1 uguuGGUCGAUUCUGUGACGGu ||||| || ||||||| caguCCAGCCUAGCCACUGCCg 2 19 133 154 [rn4:10:76487946-76487967:+] 0.5279 166 7 -27.93 -0.2056 MIMAT0001543 rno-miR-449a 303419 Cuedc1 ugGUC-GAUU-GUUAUGUGACGGu ||| | |: | | ||||||| caCAGUCCAGCCUAGCCACUGCCg 2 21 131 154 [rn4:10:76487944-76487967:+] 0.5279 146 7 -25.44 -0.2094

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Cuedc1 RAID00188495 rno-miR-3085 miRNA MIMAT0017805 Cuedc1 mRNA 303419 Prediction 0.1828 Cuedc1 RAID00714837 rno-miR-449a-5p miRNA MIMAT0001543 Cuedc1 mRNA 303419 Prediction 0.2202 Cuedc1 RAID00791817 rno-miR-29a-3p miRNA MIMAT0000802 Cuedc1 mRNA 303419 Prediction 0.2202 Cuedc1 RAID00872292 rno-miR-29b-3p miRNA MIMAT0000801 Cuedc1 mRNA 303419 Prediction 0.2202 Cuedc1 RAID01138473 rno-miR-449c-5p miRNA MIMAT0017803 Cuedc1 mRNA 303419 Prediction 0.1828 Cuedc1 RAID01209593 rno-miR-666-3p miRNA MIMAT0017371 Cuedc1 mRNA 303419 Prediction 0.1828 Cuedc1 RAID01552697 rno-miR-34c-5p miRNA MIMAT0000814 Cuedc1 mRNA 303419 Prediction 0.2202 Cuedc1 RAID01917156 rno-miR-34a-5p miRNA MIMAT0000815 Cuedc1 mRNA 303419 Prediction 0.2202 Cuedc1 RAID02268086 rno-miR-1956-3p miRNA MIMAT0035736 Cuedc1 mRNA 303419 Prediction 0.1828 Cuedc1 RAID02579539 rno-miR-34b-5p miRNA MIMAT0000813 Cuedc1 mRNA 303419 Prediction 0.1828 Cuedc1 RAID02752126 rno-miR-6333 miRNA MIMAT0025074 Cuedc1 mRNA 303419 Prediction 0.1828 Cuedc1 RAID03305367 rno-miR-29c-3p miRNA MIMAT0000803 Cuedc1 mRNA 303419 Prediction 0.2202