DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004655 rno-miR-345-3p 297522 Sec13 agaggucuGGGGAUCAAGUCCc |:::|:||||||| uuaacuauCUUUUGGUUCAGGc 2 15 217 238 [rn4:4:149637093-149637114:-] 0.5267 154 7 -20.82 -0.4908 MIMAT0004655 rno-miR-345-3p 297522 Sec13 agaggUCUGGGG-AU-CAAGUCcc :||::|| |: |||||| uacugGGAUUCCAUGUGUUCAGua 3 18 122 145 [rn4:4:149637186-149637209:-] 0.5267 131 0 -16.62 -0.1298 MIMAT0004720 rno-miR-30e* 297522 Sec13 cgacAUUUGUAGGCUGACUUUc | ||::||| |||||| uaauUUAAUGUCCAUCUGAAAg 2 19 144 165 [rn4:4:149637166-149637187:-] 0.5267 134 6 -16.53 -0.1014 MIMAT0004722 rno-miR-30d* 297522 Sec13 cgucguUUGUAGACUGACUUUc ||::|| |||||| uaauuuAAUGUCCAUCUGAAAg 2 17 144 165 [rn4:4:149637166-149637187:-] 0.5267 124 6 -12.56 -0.1014 MIMAT0000809 rno-miR-30a* 297522 Sec13 cgacguUUGUAGGCUGACUUUc ||::||| |||||| uaauuuAAUGUCCAUCUGAAAg 2 17 144 165 [rn4:4:149637166-149637187:-] 0.5267 132 6 -16.53 -0.1014 MIMAT0003121 rno-miR-483 297522 Sec13 uguucugcccuccccUCCUCACu ||||||| aucccacugcuaccaAGGAGUGc 2 9 67 89 [rn4:4:149637242-149637264:-] 0.3844 140 7 -11.39 -0.1192 MIMAT0003207 rno-miR-369-3p 297522 Sec13 uuUCUAGUUGGUACAUAAUAa :|| ||| :: |||||| aaGGAACAAAUGACUAUUAUu 2 20 175 195 [rn4:4:149637136-149637156:-] 0.5267 127 6 -7.99 -0.1675 MIMAT0005327 rno-miR-672 297522 Sec13 agUGUGUGUCAUGUGGUUGGAGu || :|: |: | ||||||| uuACCUAUUCUGGAACAACCUCc 2 22 26 48 [rn4:4:149637283-149637305:-] 0.3844 153 7 -14.17 -0.4058 MIMAT0000606 rno-miR-7a 297522 Sec13 ugUUGUUUUAGU--GAUCAGAAGGu |||| |: || ||:||||||| -cAACACAGGCAGCCUGGUCUUCCu 2 22 1 24 [rn4:4:149637307-149637330:-] 0.3844 168 7 -21.84 -0.4467 MIMAT0000780 rno-miR-7b 297522 Sec13 ugUUGUUUUAGU--GUUCAGAAGGu |||| |: || | :||||||| -cAACACAGGCAGCCUGGUCUUCCu 2 22 1 24 [rn4:4:149637307-149637330:-] 0.3844 160 7 -17.13 -0.4467 MIMAT0004729 rno-miR-125a-3p 297522 Sec13 ccgaGGGUUCUUGGAGUGGACa | | :|: :||||||| gcagCACUGGGUGUUCACCUGc 2 19 98 119 [rn4:4:149637212-149637233:-] 0.4556 146 7 -18.88 -0.2555 MIMAT0000869 rno-miR-194 297522 Sec13 aggUGUACCUCAACGACAAUGu :| ||| || ||||||| gcaGCCUGGUCUUCCUGUUACc 2 20 9 30 [rn4:4:149637301-149637322:-] 0.3844 159 7 -13.73 -0.5591 MIMAT0000873 rno-miR-200c 297522 Sec13 ggUAGUAAUGGGCCGUCAUAAu | :||||::: |||||| ugACUAUUAUUUUUAAGUAUUu 2 21 185 206 [rn4:4:149637125-149637146:-] 0.5267 128 6 -12.04 -0.1212 MIMAT0000875 rno-miR-200b 297522 Sec13 cagUAGUAAUGGUCCGUCAUAAu | :||||:: |||||| augACUAUUAUUUUUAAGUAUUu 2 21 184 206 [rn4:4:149637125-149637147:-] 0.5267 124 6 -9.02 -0.1212 MIMAT0001538 rno-miR-429 297522 Sec13 ugccGUAAUGGUCUGUCAUAAu :||||:: |||||| ugacUAUUAUUUUUAAGUAUUu 2 19 185 206 [rn4:4:149637125-149637146:-] 0.5267 122 6 -9.01 -0.1212 MIMAT0005307 rno-miR-375 297522 Sec13 agugcgcucggcuugCUUGUUu |||||| aaguauucauguaagGAACAAa 2 8 163 184 [rn4:4:149637147-149637168:-] 0.5267 120 6 -11.53 -0.2053

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G055575 Sec13 Rattus norvegicus 297522

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Sec13 RAID00033762 rno-miR-429 miRNA MIMAT0001538 Sec13 mRNA 297522 Prediction 0.1828 Sec13 RAID00873354 rno-miR-7a-5p miRNA MIMAT0000606 Sec13 mRNA 297522 Prediction 0.1828 Sec13 RAID00986673 rno-miR-125a-3p miRNA MIMAT0004729 Sec13 mRNA 297522 Prediction 0.2202 Sec13 RAID01527641 rno-miR-124-3p miRNA MIMAT0000828 Sec13 mRNA 297522 Prediction 0.1828 Sec13 RAID01656133 rno-miR-200b-3p miRNA MIMAT0000875 Sec13 mRNA 297522 Prediction 0.1828 Sec13 RAID01822955 rno-miR-200c-3p miRNA MIMAT0000873 Sec13 mRNA 297522 Prediction 0.1828 Sec13 RAID02489856 rno-miR-194-5p miRNA MIMAT0000869 Sec13 mRNA 297522 Prediction 0.1828 Sec13 RAID02661625 rno-miR-345-3p miRNA MIMAT0004655 Sec13 mRNA 297522 Prediction 0.1828 Sec13 RAID02929674 rno-miR-7b miRNA MIMAT0000780 Sec13 mRNA 297522 Prediction 0.1828 Sec13 RAID03523849 rno-miR-375-3p miRNA MIMAT0005307 Sec13 mRNA 297522 Prediction 0.1828