DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000568 rno-miR-330* 89783 Laptm5 agaGACGUCC-GGGACACGAA-ACg || |||| | | ||||| || cuaCUACAGGACAGUCUGCUUGUGc 2 21 83 107 [rn4:5:149796755-149796779:+] 0.6982 123 0 -16.90 -0.1060 MIMAT0004646 rno-miR-338* 89783 Laptm5 gugAGUCGUGGUCCUAU-AACAa |||||| | |||| |||| ucaUCAGCA--AUGAUACUUGUu 2 20 220 240 [rn4:5:149796892-149796912:+] 0.5859 128 0 -15.48 -0.3767 MIMAT0004652 rno-miR-342-5p 89783 Laptm5 gaGUUAG-UGUCUAUCGUGGGGa ||:|| :| :| ||||||| gaCAGUCUGCUUGU-GCACCCCc 2 21 92 113 [rn4:5:149796764-149796785:+] 0.6982 149 7 -22.43 -0.5949 MIMAT0000599 rno-miR-349 89783 Laptm5 ucucCAAUUCUGUCGUCCCGAc | |::|:| ||||||| uguaGAUGGGGCUACAGGGCUg 2 19 1172 1193 [rn4:5:149797844-149797865:+] 0.5495 154 7 -24.73 -0.1588 MIMAT0000599 rno-miR-349 89783 Laptm5 ucuccaauucugucGUCCCGAc ||||||| ccagccuguuugcuCAGGGCUa 2 9 921 942 [rn4:5:149797593-149797614:+] 0.5085 140 7 -12.77 -0.2146 MIMAT0000601 rno-miR-129* 89783 Laptm5 uacgaaaaACCCC-AU-UCCCGAa ||||| || |||||| gguguagaUGGGGCUACAGGGCUg 2 15 1170 1193 [rn4:5:149797842-149797865:+] 0.5495 125 6 -20.78 -0.1384 MIMAT0000783 rno-miR-10b 89783 Laptm5 uguguuuaagccAAGAUGUCCc | ||||||| gcugccauggccUACUACAGGa 2 11 72 93 [rn4:5:149796744-149796765:+] 0.6982 142 7 -13.93 -0.6088 MIMAT0004714 rno-miR-26b* 89783 Laptm5 cucgguucauuacCUCUUGUCc |||||||| ugauacuuguucaGAGAACAGu 2 10 230 251 [rn4:5:149796902-149796923:+] 0.5859 145 7 -12.80 -0.2252 MIMAT0004716 rno-miR-28* 89783 Laptm5 agguccUCG-AGUGUUAGAUCAc ||| || | ||||||| cagccuAGCAUCUC-AUCUAGUc 2 17 197 218 [rn4:5:149796869-149796890:+] 0.5859 149 7 -15.07 -0.2520 MIMAT0004721 rno-miR-30b-3p 89783 Laptm5 cugcAUUUGUAGGUGUAGGGUc | | ||| |||||||| guuaUCACCAU-GACAUCCCAa 2 19 887 907 [rn4:5:149797559-149797579:+] 0.5085 152 7 -16.34 -0.6021 MIMAT0004731 rno-miR-125b* 89783 Laptm5 uccAGGGUUCUCGGACUGAACa |: | | |: ||||||| ucaUUGCUUGUGUGUGACUUGg 2 20 1227 1248 [rn4:5:149797899-149797920:+] 0.5495 147 7 -13.86 -0.1070 MIMAT0004736 rno-miR-193* 89783 Laptm5 aguaGAACG--GGCGUUUC-UGGGu :|||| || | ||| |||| cccaUUUGCUACCCCCAAGUACCCa 2 19 441 465 [rn4:5:149797113-149797137:+] 0.4918 121 0 -21.68 -0.6529 MIMAT0004738 rno-miR-199a-3p 89783 Laptm5 auugguuacacGUCUGAUGACa || ||||||| aguuugguuaaCA-ACUACUGg 2 12 269 289 [rn4:5:149796941-149796961:+] 0.5859 141 7 -11.41 -0.2195 MIMAT0005446 rno-miR-219-2-3p 89783 Laptm5 ugucuACAGG-UCGGUGUUAAGa || || ||| ||||||| gaaucUGGCCAAGCAACAAUUCc 2 18 339 361 [rn4:5:149797011-149797033:+] 0.5859 160 7 -15.22 -0.1484 MIMAT0000894 rno-miR-291a-5p 89783 Laptm5 ucucucccGGAGGUGAAACUAc :||:||||||||| cuccugcuUCUUCACUUUGAUg 2 15 50 71 [rn4:5:149796722-149796743:+] 0.6982 162 7 -21.74 -0.4442 MIMAT0000900 rno-miR-298 89783 Laptm5 ccCUUCU-UGUCGGG-AGGAGACGg |:| | | |||| ||||||| auGGACACCCUGCCCAGCCUCUGCu 2 22 636 660 [rn4:5:149797308-149797332:+] 0.5159 151 7 -25.74 -0.1220 MIMAT0000900 rno-miR-298 89783 Laptm5 ccCUUCUUGUCGGGAGGA-GACGg | :|||| ||| ||| |||| agGCGGAACUCCCCGCCUCCUGCu 2 22 34 57 [rn4:5:149796706-149796729:+] 0.6982 133 0 -27.23 -0.2677 MIMAT0003191 rno-miR-493 89783 Laptm5 gaccgugugucaucUGGAAGu |||||| acaaauaaaacaauACCUUCa 2 8 473 493 [rn4:5:149797145-149797165:+] 0.5245 120 6 -11.72 -0.1407 MIMAT0005329 rno-miR-674-5p 89783 Laptm5 auGUGGUGAGGGUA-GAGUC-ACg :::|| | |||| ||||| || ggUGUCAGU-CCAUACUCAGCUGu 2 21 363 385 [rn4:5:149797035-149797057:+] 0.5859 121 0 -19.74 -0.2236 MIMAT0005342 rno-miR-652 89783 Laptm5 guguUGGGAUCACCG-CGGUAa ||::|: |||| ||||| cuucACUUUGAUGGCUGCCAUg 2 18 59 80 [rn4:5:149796731-149796752:+] 0.6982 129 0 -18.95 -0.2783 MIMAT0012823 rno-miR-490 89783 Laptm5 gucguaccucaggaGGUCCAAc ||||||| ugacaucccaacagCCAGGUUg 2 9 897 918 [rn4:5:149797569-149797590:+] 0.5085 140 7 -18.94 -0.1291 MIMAT0012826 rno-miR-220 89783 Laptm5 uccaGAGACUGUGACACCACc ||| :| :||||||| uuugCUCCUGC-UUGUGGUGu 2 18 1155 1174 [rn4:5:149797827-149797846:+] 0.5495 147 7 -16.77 -0.2002 MIMAT0012830 rno-miR-504 89783 Laptm5 cugUCU-CACGUCUGGUCCCAGa :|| || | :|||||||| uggGGAGGUUCCUGCCAGGGUCa 2 20 836 858 [rn4:5:149797508-149797530:+] 0.5085 154 7 -23.94 -0.4071 MIMAT0012830 rno-miR-504 89783 Laptm5 cuGU-CUCA-CGUCUGGU-CCCAGa || |:|| |::|::|| ||||| guCAUGGGUCGUGGGUCAUGGGUCa 2 21 384 408 [rn4:5:149797056-149797080:+] 0.5388 126 0 -23.04 -0.1406 MIMAT0012830 rno-miR-504 89783 Laptm5 cuGU-CUCA-CGUCUGGU-CCCAGa || |:|| ::||:|| ||||| guCAUGGGUCAUGGAUCAUGGGUCa 2 21 405 429 [rn4:5:149797077-149797101:+] 0.4918 122 0 -20.67 -0.1098 MIMAT0012852 rno-miR-667 89783 Laptm5 gaacccgacccaccgUCCACAGu ||||||| ucuaauaagaaaaugAGGUGUCa 2 9 555 577 [rn4:5:149797227-149797249:+] 0.5105 140 7 -13.50 -0.8641 MIMAT0000564 rno-miR-328 89783 Laptm5 ugccuucCCGUCUCUCCCGGUc || ||| ||||||| gugacuuGGAAGA-AGGGCCAa 2 16 1240 1260 [rn4:5:149797912-149797932:+] 0.5495 153 7 -18.64 -0.9726 MIMAT0000824 rno-miR-103 89783 Laptm5 aguAUCGGGACA-UGUUA-CGACGa || :|||| || || ||||| cacUAUGUCUGUCACUAUGGCUGCc 2 21 995 1019 [rn4:5:149797667-149797691:+] 0.5085 127 0 -15.20 -0.1439 MIMAT0000826 rno-miR-107 89783 Laptm5 acuAUCGGGACA-UGUUA-CGACGa || :|||| || || ||||| cacUAUGUCUGUCACUAUGGCUGCc 2 21 995 1019 [rn4:5:149797667-149797691:+] 0.5085 127 0 -15.18 -0.1439 MIMAT0004729 rno-miR-125a-3p 89783 Laptm5 ccGAGGGUUCUUGGAGU-GGACa ||| ||| |: ||| |||| uaCUCACAACAGAGUCACCCUGg 2 21 144 166 [rn4:5:149796816-149796838:+] 0.5859 128 0 -17.31 -0.3050 MIMAT0000838 rno-miR-132 89783 Laptm5 gcUGGU-ACCGACAUCU-GACAAu ||:| ||||| | || ||||| caACUACUGGCU-U-GAUCUGUUu 2 21 280 301 [rn4:5:149796952-149796973:+] 0.5859 123 0 -16.45 -0.1434 MIMAT0000844 rno-miR-138 89783 Laptm5 gcCGGACUAAGUGUUGUGGUCGa ||: ||| |||||||||| uaGCUAGAUAGCCAACACCAGCa 2 22 301 323 [rn4:5:149796973-149796995:+] 0.5859 169 7 -23.14 -0.5816 MIMAT0000877 rno-miR-204 89783 Laptm5 uccgUAUCCUACUGUUU-CCCUu ||: |:|| |||| |||| gaaaAUGAGGUGUCAAACGGGAg 2 19 563 585 [rn4:5:149797235-149797257:+] 0.5105 130 0 -17.32 -0.3393 MIMAT0000878 rno-miR-205 89783 Laptm5 gucugaggccaCCUUACUUCCu | |||||||| ggaaagaaaaaGAAAUGAAGGu 2 12 586 607 [rn4:5:149797258-149797279:+] 0.5105 147 7 -11.51 -0.4228 MIMAT0000882 rno-miR-211 89783 Laptm5 ucCGUUUCCU--ACUGUUU-CCCUu | ||| || || |||| |||| aaGAAAAUGAGGUGUCAAACGGGAg 2 21 561 585 [rn4:5:149797233-149797257:+] 0.5105 127 0 -16.79 -0.3393 MIMAT0004742 rno-miR-296 89783 Laptm5 ccucucggAGGUGGGUUGG-GAg |||| |||||| || aauaccaaUCCAGCCAACCGCUg 2 15 511 533 [rn4:5:149797183-149797205:+] 0.5571 126 0 -20.87 -0.3879 MIMAT0003119 rno-miR-224 89783 Laptm5 auuugccuuggugauCACUGAAc ||||||| ugucauugcuuguguGUGACUUg 2 9 1225 1247 [rn4:5:149797897-149797919:+] 0.5495 140 7 -15.74 -0.2078 MIMAT0003122 rno-miR-370 89783 Laptm5 uuGGUCCA-AGG-UGGGGUCGUCCg |:|| | || || |||||||| agCUAGAUAGCCAACACCAGCAGGg 2 22 302 326 [rn4:5:149796974-149796998:+] 0.5859 159 7 -27.77 -0.1148 MIMAT0003122 rno-miR-370 89783 Laptm5 uugguccaaggugggGUCGUCCg ||||||| caacaccagcaggggCAGCAGGa 2 9 313 335 [rn4:5:149796985-149797007:+] 0.5859 140 7 -19.33 -0.2485 MIMAT0003123 rno-miR-377 89783 Laptm5 gguuuucAACGGAAACACACUa ||||:| ||||||| ugugucaUUGCUUGUGUGUGAc 2 16 1223 1244 [rn4:5:149797895-149797916:+] 0.5495 163 7 -16.32 -0.1668 MIMAT0003179 rno-miR-542-3p 89783 Laptm5 aaAGUCAAUAGU-UAGACAGUGu || || | :| :|||||||| ugUCUGUCACUAUGUCUGUCACu 2 21 988 1010 [rn4:5:149797660-149797682:+] 0.5085 159 7 -16.25 -0.1667 MIMAT0005310 rno-miR-384-3p 89783 Laptm5 uaacacUUGUUAAAGAUCCUUa |: ::|| ||||||| gguucuAGGGGUUGCUAGGAAu 2 17 1134 1155 [rn4:5:149797806-149797827:+] 0.5495 152 7 -13.58 -0.2034 MIMAT0005314 rno-miR-425 89783 Laptm5 aguugcccuCACUAGCACAGUAa ||| :||||||| guucccacuGUGCCUGUGUCAUu 2 15 1209 1231 [rn4:5:149797881-149797903:+] 0.5495 150 7 -15.60 -0.3700 MIMAT0005595 rno-miR-146b 89783 Laptm5 ugUCGGAUACCUUAAGUC-AAGAGu ||||| || || || ||||| ccAGCCUCUG--CUUGAGUUUCUCu 2 23 649 671 [rn4:5:149797321-149797343:+] 0.5213 127 0 -18.35 -0.1141

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Laptm5 RAID00143609 rno-miR-100-3p miRNA MIMAT0017112 Laptm5 mRNA 89783 Prediction 0.1828 Laptm5 RAID00185380 rno-miR-664-1-5p miRNA MIMAT0017228 Laptm5 mRNA 89783 Prediction 0.1828 Laptm5 RAID00301675 rno-miR-3541 miRNA MIMAT0017795 Laptm5 mRNA 89783 Prediction 0.1828 Laptm5 RAID00755238 rno-miR-3559-5p miRNA MIMAT0017827 Laptm5 mRNA 89783 Prediction 0.1828 Laptm5 RAID00797903 rno-miR-3084b-5p miRNA MIMAT0035741 Laptm5 mRNA 89783 Prediction 0.1828 Laptm5 RAID00886241 rno-miR-107-3p miRNA MIMAT0000826 Laptm5 mRNA 89783 Prediction 0.1828 Laptm5 RAID01128187 rno-miR-3084c-5p miRNA MIMAT0035743 Laptm5 mRNA 89783 Prediction 0.1828 Laptm5 RAID01148237 rno-miR-211-5p miRNA MIMAT0000882 Laptm5 mRNA 89783 Prediction 0.1828 Laptm5 RAID01153176 rno-miR-204-5p miRNA MIMAT0000877 Laptm5 mRNA 89783 Prediction 0.1828 Laptm5 RAID01278370 rno-miR-377-3p miRNA MIMAT0003123 Laptm5 mRNA 89783 Prediction 0.1828 Laptm5 RAID01504078 rno-miR-3084a-5p miRNA MIMAT0035739 Laptm5 mRNA 89783 Prediction 0.1828 Laptm5 RAID01546106 rno-miR-370-3p miRNA MIMAT0003122 Laptm5 mRNA 89783 Prediction 0.2202 Laptm5 RAID01589823 rno-miR-542-3p miRNA MIMAT0003179 Laptm5 mRNA 89783 Prediction 0.1828 Laptm5 RAID01640338 rno-miR-384-3p miRNA MIMAT0005310 Laptm5 mRNA 89783 Prediction 0.1828 Laptm5 RAID01748571 rno-miR-132-3p miRNA MIMAT0000838 Laptm5 mRNA 89783 Prediction 0.1828 Laptm5 RAID01902388 rno-miR-296-3p miRNA MIMAT0004742 Laptm5 mRNA 89783 Prediction 0.1828 Laptm5 RAID01925977 rno-miR-205 miRNA MIMAT0000878 Laptm5 mRNA 89783 Prediction 0.1828 Laptm5 RAID02150853 rno-miR-328a-3p miRNA MIMAT0000564 Laptm5 mRNA 89783 Prediction 0.1828 Laptm5 RAID02504559 rno-miR-664-2-5p miRNA MIMAT0017229 Laptm5 mRNA 89783 Prediction 0.1828 Laptm5 RAID02675591 rno-miR-425-5p miRNA MIMAT0005314 Laptm5 mRNA 89783 Prediction 0.1828 Laptm5 RAID02773315 rno-miR-125a-3p miRNA MIMAT0004729 Laptm5 mRNA 89783 Prediction 0.1828 Laptm5 RAID02922241 rno-miR-224-5p miRNA MIMAT0003119 Laptm5 mRNA 89783 Prediction 0.1828 Laptm5 RAID02945446 rno-miR-138-5p miRNA MIMAT0000844 Laptm5 mRNA 89783 Prediction 0.1828 Laptm5 RAID03443195 rno-miR-146b-5p miRNA MIMAT0005595 Laptm5 mRNA 89783 Prediction 0.1828 Laptm5 RAID03856063 rno-miR-103-3p miRNA MIMAT0000824 Laptm5 mRNA 89783 Prediction 0.1828