DNA & RNA Element - miRNAMap |
Gene Name | Mature miRNA | Target Start | Target End | miRNA 3-5 | Alignment | Target 5-3 |
Ostf1 | rno-miR-1 | 21 | 54 | -AUGUG--UGAAGAAAU--------GUAAGGU- | |:| |||||||| ||||||| | AUGCCUAAACUUCUUUUGCUUUUGCCAUUCCAA |
Ostf1 | rno-miR-128a | 115 | 135 | UUUUCUCUG-GCCAA-GUGACACU- | |:| :|| |||||||| | -----CGGCAUGGCUACACUGUGAC |
Ostf1 | rno-miR-128b | 115 | 135 | CUUUCUCUG-GCCAA-GUGACACU- | |:| :|| |||||||| | -----CGGCAUGGCUACACUGUGAC |
Ostf1 | rno-miR-140* | 150 | 178 | -ACAGGCACC----AAGAUG-GGACACCAU | || ||||| |||| | |||| || | GUGAGCGUGGGUAAUUCU-CACCUGCGGC- |
Ostf1 | rno-miR-154 | 114 | 139 | -GCUU--CCGUUGUGCCUAUUGGAU- | ||: ||| |||| :|:||||| | ACGGCAUGGCUACACU-GUGACCUAU |
Ostf1 | rno-miR-181a | 121 | 149 | -UGA-GUGGCUGUC---GCAACUUACAA | :|| |||:| | :| |||:||| | GGCUACACUGUGACCUAUGAUGAGUGUG |
Ostf1 | rno-miR-181b | 125 | 149 | GGGUGGCUGUCG---UUACUUACAA | |||:| | | :||||:||| | -ACACUGUGACCUAUGAUGAGUGUG |
Ostf1 | rno-miR-193 | 56 | 75 | -GACCCUGAAACAUC-CGGUCAA | ||||| |||| ||||| | CCUGGG---UUGUUUUGCCAGA- |
Ostf1 | rno-miR-206 | 23 | 54 | -GGUGUGUGAAGGAAU--------GUAAGGU- | || |||||:|| ||||||| | GCCUAA-ACUUCUUUUGCUUUUGCCAUUCCAA |
Ostf1 | rno-miR-22* | 174 | 197 | UUUCGAACGGUGA----CUUCUUGA | :|||||||| |||||: | -CGGCUUGCCAAUAAGAGAAGAGA- |
Ostf1 | rno-miR-27a | 111 | 135 | -CGCCUUGAAUCG--GUGACACUU | || ::| |:|| |||||||| | AGCACGGCAUGGCUACACUGUGAC |
Ostf1 | rno-miR-27b | 111 | 135 | -CGUCUUGAAUCG--GUGACACUU | ||| ::| |:|| |||||||| | AGCACGGCAUGGCUACACUGUGAC |
Ostf1 | rno-miR-291-5p | 1 | 25 | UCUCUCCCGGAGG-------UGAAACUAC- | |||||| :|||||||| | ------UGCCUCCCGGAGCUGCUUUGAUGC |
Ostf1 | rno-miR-31 | 10 | 48 | GUCGA------UACGGU-----------CGUAGAACGGA | |||| ||||| || |:||||| | GAGCUGCUUUGAUGCCUAAACUUCUUUUGC-UUUUGCCA |
Ostf1 | rno-miR-342 | 138 | 162 | -CUGCCCACGCUAAAGACACACUCU | ||:| |||:| | | |||:| | UGAUGAGUGUGCG-UGAGCGUGGGU |
Ostf1 | rno-miR-34b | 114 | 139 | GUUAGUCG-AUUAAUGUGAC---GGAU- | |:|| |:: ||||||| |||| | ---ACGGCAUGGCUACACUGUGACCUAU |
Ostf1 | rno-miR-34c | 111 | 133 | -CGUUAGUCG-AUUGAUGUGACGGA | ||| |:|| |::||||||||: | AGCA--CGGCAUGGCUACACUGUG- |
Ostf1 | rno-miR-429 | 59 | 85 | UGCCGU---AAUGGUCUG-UCAUAAU- | ||: ||:||||| ||||||: | -GGGUUGUUUUGCCAGAAGAGUAUUGA |
Ostf1 | rno-miR-433 | 124 | 145 | -UGUGGCUCCUCGGGUAGUACUA | ||||:| || ||:|| |||| | UACACUGU-GA-CCUAUGAUGAG |
Ostf1 | rno-miR-449 | 111 | 133 | -UG-GUCG-AUUGUUAUGUGACGGU | :| |:|| |::| |||||||: | AGCACGGCAUGGC--UACACUGUG- |
Ostf1 | rno-miR-540 | 114 | 138 | GGUCCUAGC--UG-GAGACUGGA- | |:| || | || || |||||| | ACGGCAUGGCUACACUGUGACCUA |
Ostf1 | rno-miR-1 | 24 | 52 | augUGUGAAGAAA--------UGUAAGGU | | |||||||| ||||||| | cctAAACTTCTTTTGCTTTTGCCATTCCA |
Ostf1 | rno-miR-128a | 106 | 133 | uuUUCUCUGGCC------AAGUGACACU | | ||| ||| | |||||||| | gtATGAGCACGGCATGGCTACACTGTGA |
Ostf1 | rno-miR-128b | 106 | 133 | CUUUCUCUGGCC------AAGUGACACU | | | ||| ||| | |||||||| | GTATGAGCACGGCATGGCTACACTGTGA |
Ostf1 | rno-miR-140* | 151 | 178 | ACAGGCACC----AAGAUGGGACACCau | || ||||| |||| |||| || | TGAGCGTGGGTAATTCTCACCTGCGGct |
Ostf1 | rno-miR-154 | 115 | 137 | GC--UUCCGUUGUGCCUAUUGGAU | || | ||| |||| :|:||||| | CGGCATGGCTACAC-TGTGACCTA |
Ostf1 | rno-miR-181a | 122 | 148 | uGA-GUGGCUGUCG---CAACUUACAa | || |||:| | | | |||:||| | gCTACACTGTGACCTATGATGAGTGTg |
Ostf1 | rno-miR-181b | 124 | 148 | ggGUGGCUGUCG---UUACUUACAa | |||:| | | :||||:||| | taCACTGTGACCTATGATGAGTGTg |
Ostf1 | rno-miR-193 | 57 | 75 | GACCCUGAAACAUCCGGUCaa | ||||| : || | ||||| | CTGGGTTGTTTT--GCCAGaa |
Ostf1 | rno-miR-206 | 24 | 52 | GGUGUGUGAAG-----GAA---UGUAAGGU | || :| ||||| ||| ||||||| | CC-TAAACTTCTTTTGCTTTTGCCATTCCA |
Ostf1 | rno-miR-22* | 173 | 197 | uuuCGAACGGUGA----CUUCUuga | |||||||| | ||||| | gcgGCTTGCCAATAAGAGAAGAgat |
Ostf1 | rno-miR-27a | 114 | 134 | cGCCUUGAAUCG--GUGACACUu | ||| | |:|| |||||||| | aCGG--CATGGCTACACTGTGAc |
Ostf1 | rno-miR-27b | 112 | 134 | CGUCUUGAAUCG--GUGACACUu | ||| ::| |:|| |||||||| | GCACGGCATGGCTACACTGTGAc |
Ostf1 | rno-miR-31 | 13 | 47 | GUCGA---UACGG---U--------CGUAGAACGGa | | ||| ||||| | || |:||||| | CTGCTTTGATGCCTAAACTTCTTTTGC-TTTTGCCa |
Ostf1 | rno-miR-31 | 42 | 72 | guCGAUACGGU--------C-GUAGAACGGa | || || ||| | ::|:||||| | ttGCCATTCCAAAACCTGGGTTGTTTTGCCa |
Ostf1 | rno-miR-342 | 132 | 155 | CUGCCCAC-GCUAAAGACACACUCu | ||| || :|| | || ||||| | GACCTATGATGA-GTGTGCGTGAGc |
Ostf1 | rno-miR-34b | 111 | 137 | guuaGUCG-AUUAAUGUGAC---GGAU | |:|| |:: ||||||| |||| | agcaCGGCATGGCTACACTGTGACCTA |
Ostf1 | rno-miR-34c | 112 | 136 | CGUUAGUCG-AUUGAUGUGAC---GGA | ||| |:|| |::|||||||| ||| | GCA--CGGCATGGCTACACTGTGACCT |
Ostf1 | rno-miR-429 | 61 | 83 | ugcCGUAAUGGUC-UGUCAUAAu | |: ||:|||| | |||||| | gttGTTTTGCCAGAAGAGTATTg |
Ostf1 | rno-miR-433 | 125 | 144 | UGUGGCUCCUCGGGUAGUACUa | ||||:| || ||:|| |||| | ACACTG-TGA-CCTATGATGAg |
Ostf1 | rno-miR-449 | 113 | 133 | ugGUCG-AUUGUUAUGUGACggu | |:|| |::| ||||||| | caCGGCATGGC--TACACTGtga |
Ostf1 | rno-miR-493 | 119 | 139 | gACCG-UGUGUCAUCUGGAagu | |||| |||| || ||||| | aTGGCTACACTGT-GACCTatg |
Ostf1 | rno-miR-503 | 1 | 18 | gucaugacaagggCGACGAu | |||||| | --tgcctcccggaGCTGCTt |
Ostf1 | rno-miR-128a | 126 | 133 | UU-----------------UUCU--CUG-GCCAA-GUGACACU | :|| |:| :|| |||||||| | UUCCUUUUACCGUCUGUAUGAGCACGGCAUGGCUACACUGUGAC |
Ostf1 | rno-miR-128b | 126 | 133 | -------------------CUUUCUCUG-GCCAA-GUGACACU | ||: |:| :|| |||||||| | UUCCUUUUACCGUCUGUAUGAGCACGGCAUGGCUACACUGUGAC |
Ostf1 | rno-miR-27a | 127 | 134 | --------------------CGCCUUGAAUCG--GUGACACUU | || ::| |:|| |||||||| | UCCUUUUACCGUCUGUAUGAGCACGGCAUGGCUACACUGUGAC |
Ostf1 | rno-miR-27b | 127 | 134 | --------------------CGUCUUGAAUCG--GUGACACUU | ||| :| |:|| |||||||| | UCCUUUUACCGUCUGUAUGAGCACGGCAUGGCUACACUGUGAC |