DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004711 rno-miR-21* 155183 Skap2 cuGUCG-GGUAGCUGACGACAAc || | |:: |::||||||| gcCACCACUGAAGGUUGCUGUUu 2 21 343 365 [rn4:4:80149900-80149922:-] 0.5510 151 7 -16.12 -0.4048 MIMAT0004711 rno-miR-21* 155183 Skap2 cugucggguaGCUGACGACAAc | ::||||||| gagauaaggcCUGUUGCUGUUu 2 13 239 260 [rn4:4:80150005-80150026:-] 0.5510 144 7 -16.12 -0.3575 MIMAT0003152 rno-miR-22* 155183 Skap2 auUUCGAACGGUGACUUCUUga || || |:||||||||| ucAACAUUUCUACUGAAGAAaa 3 21 19 40 [rn4:4:80150225-80150246:-] 0.5510 152 0 -16.49 -0.1076 MIMAT0004718 rno-miR-29a* 155183 Skap2 gacuuguggUUUUCUUUAGUca :||| |||||| agucugggaGAAAUAAAUCAac 3 14 2 23 [rn4:4:80150242-80150256,80150642-80150648:-] 0.6574 133 0 -10.40 -0.1969 MIMAT0004720 rno-miR-30e* 155183 Skap2 cgacAUUUGU-AGGCUGACUUUc | |||| |:| ||||||: uaaaUCAACAUUUCUACUGAAGa 2 19 15 37 [rn4:4:80150228-80150250:-] 0.5510 145 0 -12.01 -0.3072 MIMAT0004722 rno-miR-30d* 155183 Skap2 cgucguUUGUAGA-CUGACUUUc |||||:| ||||||: uaaaucAACAUUUCUACUGAAGa 2 17 15 37 [rn4:4:80150228-80150250:-] 0.5510 143 0 -12.87 -0.3072 MIMAT0000809 rno-miR-30a* 155183 Skap2 cgacguUUGU-AGGCUGACUUUc |||| |:| ||||||: uaaaucAACAUUUCUACUGAAGa 2 17 15 37 [rn4:4:80150228-80150250:-] 0.5510 143 0 -12.11 -0.3072 MIMAT0000813 rno-miR-34b 155183 Skap2 guuagucgauuaaUGUGACGGAu | ||||||| cgcuuuggaacacAGACUGCCUg 2 11 98 120 [rn4:4:80150145-80150167:-] 0.5510 142 7 -14.34 -0.1011 MIMAT0004728 rno-miR-124* 155183 Skap2 uaGUUCCAGGCGACA-CUUGUGc |||| |||| | |||||| ugCAAG---CGCUUUGGAACACa 2 21 92 111 [rn4:4:80150154-80150173:-] 0.5510 124 6 -17.48 -0.3650 MIMAT0004738 rno-miR-199a-3p 155183 Skap2 auugguuacacgucuGAUGACa |||||| aauaaaucaacauuuCUACUGa 2 8 13 34 [rn4:4:80150231-80150252:-] 0.5510 120 6 -11.63 -0.1946 MIMAT0000900 rno-miR-298 155183 Skap2 ccCUUCUUGUCGGG-AGG-AGACGg | | |: ||:|: ||| ||||| ugGCACAGAAGUCUGUCCAUCUGCa 2 22 71 95 [rn4:4:80150170-80150194:-] 0.5510 124 0 -20.34 -0.2042 MIMAT0003191 rno-miR-493 155183 Skap2 gaccguguGUCAUCUGGAAGu ::| |||||||| ccuuccuuUGGGAGACCUUCc 2 14 127 147 [rn4:4:80150118-80150138:-] 0.5510 149 7 -14.35 -0.2312 MIMAT0005281 rno-miR-871 155183 Skap2 acACUGGCCGUGGU-UAGACUUAu | |::| |::: |||||||| auUCAUUGUGAUUGUAUCUGAAUc 2 22 307 330 [rn4:4:80149935-80149958:-] 0.5510 152 7 -16.91 -0.8327 MIMAT0005323 rno-miR-532-3p 155183 Skap2 acguucggaacccacACCCUCc |||||| ----------gagucUGGGAGa 2 8 1 12 [rn4:4:80150253-80150256,80150642-80150649:-] 0.6574 120 6 -11.45 -0.3109 MIMAT0005329 rno-miR-674-5p 155183 Skap2 augUGGUGAGGGUAGAGUC-ACg ||| :|||:: ||||| || gagACC-UUCCUGCCUCAGCUGu 2 20 138 159 [rn4:4:80150106-80150127:-] 0.5510 125 0 -21.57 -0.1261 MIMAT0012838 rno-miR-653 155183 Skap2 guCAUCUCUUACAAAGUUGUg | ||| ||| |||||| ugGGAGA-AAUAAAUCAACAu 2 20 6 25 [rn4:4:80150240-80150256,80150642-80150644:-] 0.6574 125 6 -12.78 -0.1316 MIMAT0012844 rno-miR-665 155183 Skap2 ucCCUGGAGUCGGA-GGACCa ||| | ||| || ||||| uuGGAACACAGACUGCCUGGa 2 19 102 122 [rn4:4:80150143-80150163:-] 0.5510 130 0 -18.74 -0.2060 MIMAT0012846 rno-miR-201 155183 Skap2 uucUUGUUACGGAAUGACUca |||| | | |||||| aucAACAUUUC--UACUGAag 3 19 18 36 [rn4:4:80150229-80150247:-] 0.5510 131 0 -10.06 -0.1091 MIMAT0004641 rno-miR-330 155183 Skap2 cggAUUCUGUGUCCGG-GUCUCu | ||| ||| ||| ||||| acaUUAGAGACAAGCCGCAGAGa 2 20 220 242 [rn4:4:80150023-80150045:-] 0.5510 135 0 -23.61 -0.6568 MIMAT0000780 rno-miR-7b 155183 Skap2 uguuguuuuaGUGUUCAGA-AGGu || |||||| ||| uuugcuggcaCAGAAGUCUGUCCa 2 14 66 89 [rn4:4:80150176-80150199:-] 0.5510 121 0 -16.35 -0.4111 MIMAT0000800 rno-miR-28 155183 Skap2 gaguUAUCUGACACUCGAGGAa || ||| ||||||| cgucAUUCACU-AAAGCUCCUg 2 19 170 190 [rn4:4:80150075-80150095:-] 0.5510 144 7 -14.05 -0.8185 MIMAT0000818 rno-miR-96 155183 Skap2 ucguuuuuacacgaUCACGGUuu ||||||| uggguuauuuuuagAGUGCCAca 3 10 377 399 [rn4:4:80149866-80149888:-] 0.5510 125 0 -11.82 -0.2521 MIMAT0000853 rno-miR-150 155183 Skap2 gugaccauguucccAACCCUCu ||||||| ggagccaccuuccuUUGGGAGa 2 9 120 141 [rn4:4:80150124-80150145:-] 0.5510 140 7 -14.73 -0.3446 MIMAT0000853 rno-miR-150 155183 Skap2 gugaccauguucccaACCCUCu |||||| ----------gagucUGGGAGa 2 8 1 12 [rn4:4:80150253-80150256,80150642-80150649:-] 0.6574 120 6 -12.79 -0.3109 MIMAT0000860 rno-miR-183 155183 Skap2 ucACUUAAGAUGGUCACGGUau | | ||:|| ||||||| ggUUAUUUUUA-GAGUGCCAca 3 21 379 399 [rn4:4:80149866-80149886:-] 0.5510 138 0 -13.26 -0.2499 MIMAT0000876 rno-miR-203 155183 Skap2 gaucaccaggAUUUGUAAAGug | |||||||| gagaaauaaaUCAACAUUUCua 3 13 9 30 [rn4:4:80150235-80150256:-] 0.5510 132 0 -7.07 -0.1602 MIMAT0000890 rno-miR-221 155183 Skap2 cuUUGGGUCGUCUGUUACAUCGa ||| | | | |||||||| aaAACAAAACUUA-AAUGUAGCu 2 22 37 58 [rn4:4:80150207-80150228:-] 0.5510 151 7 -14.57 -1.1168 MIMAT0000891 rno-miR-222 155183 Skap2 uggGUCAUCGGUCUACAUCGa || | ::| ||||||| aaaCAAAACUUAAAUGUAGCu 2 19 38 58 [rn4:4:80150207-80150227:-] 0.5510 150 7 -11.47 -1.1212 MIMAT0003176 rno-miR-539 155183 Skap2 ugUGUGGUUCCUAUUAAAGAgg | |: || | |||||| agAAAUAAAUCAACAUUUCUac 3 21 10 31 [rn4:4:80150234-80150255:-] 0.5510 128 0 -6.34 -0.1249 MIMAT0005312 rno-miR-411 155183 Skap2 gcaugcgauaugccAGAUGAu |||||| aauaaaucaacauuUCUACUg 2 8 13 33 [rn4:4:80150232-80150252:-] 0.5510 120 6 -10.16 -0.1426 MIMAT0005331 rno-miR-708 155183 Skap2 gggucgaucuaacaUUCGAGGAa |||||||| gucgucauucacuaAAGCUCCUg 2 10 168 190 [rn4:4:80150075-80150097:-] 0.5510 145 7 -14.47 -0.8257

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G101119 Skap2 Rattus norvegicus 155183

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Skap2; Scap2; Skap55r rno-let-7a 133 156 UUGAUAUGUUGGAU-GAUGGAGU- :|: :|||| ||:||||| -UUUGGGAGACCUUCCUGCCUCAG Skap2; Scap2; Skap55r rno-let-7b 121 156 -UUGGUGUG----------UUGGAU-GAUGGAGU- |:|||| :|||| ||:||||| GAGCCACCUUCCUUUGGGAGACCUUCCUGCCUCAG Skap2; Scap2; Skap55r rno-let-7c 121 156 -UUGGU--------AUG--UUGGAU-GAUGGAGU- |:||| |: :|||| ||:||||| GAGCCACCUUCCUUUGGGAGACCUUCCUGCCUCAG Skap2; Scap2; Skap55r rno-let-7d 131 155 UGAUACG--UUGGAU-GAUGGAGA || || :|||| ||:|||| CCUUUGGGAGACCUUCCUGCCUCA Skap2; Scap2; Skap55r rno-let-7e 133 156 UGAUAUGUUGG-AGGAUGGAGU- :|: :||| ||||:||||| UUUGGGAGACCUUCCUGCCUCAG Skap2; Scap2; Skap55r rno-miR-100 288 306 -GUGUUCAAGCCUAGAUGCCCAA ||| :|||:| ||:||| CCACUGGUUUG----UAUGGGG- Skap2; Scap2; Skap55r rno-miR-101b 151 170 GAAGUCGAUAGUGUCAUGACAU- ||||||:|| || ||||: -CUCAGCUGUC---GUCCUGUGU Skap2; Scap2; Skap55r rno-miR-103 244 261 AGUAUCGGGACAUGUUACGACGA- || ||||| |||||:| ---AAGGCCUGU----UGCUGUUU Skap2; Scap2; Skap55r rno-miR-106b 80 106 -UAGACGU---GACAGUCGUGAAAU- :||||: ||| |||:||||: AGUCUGUCCAUCUGCAAGCGCUUUGG Skap2; Scap2; Skap55r rno-miR-107 240 261 ACUA-UCGGGACAUGUUACGACGA- ||| || ||||| |||||:| AGAUAAGGCCUGU----UGCUGUUU Skap2; Scap2; Skap55r rno-miR-128a 273 319 UUUUCUC-------------UGGCCA-------------AGUGACACU ||| ||:||| |||:||||| ---UGAGUUUUAAUUUACCCACUGGUUUGUAUGGGGAAUUCAUUGUGAU Skap2; Scap2; Skap55r rno-miR-128b 273 319 CUUUCUC-------------UGGCCA-------------AGUGACACU ||| ||:||| |||:||||| ---UGAGUUUUAAUUUACCCACUGGUUUGUAUGGGGAAUUCAUUGUGAU Skap2; Scap2; Skap55r rno-miR-134 129 163 -GGGAGACC--------------AGUUGGUCAGUGU :|||:||| |||:|: |||: UUCCUUUGGGAGACCUUCCUGCCUCAGCU-GUCGU- Skap2; Scap2; Skap55r rno-miR-150 117 143 GUGACCAUGUUCCC----AACCCUCU- |||| :| |||||||| -CCUGGAGCCACCUUCCUUUGGGAGAC Skap2; Scap2; Skap55r rno-miR-15b 340 364 ACAUUUGGU----ACUACACGACGAU- ||:||| ||| | |:||||: --GAAGCCACCACUGAAG-GUUGCUGU Skap2; Scap2; Skap55r rno-miR-16 234 259 -GCGG--UUAUAAAUGCACGACGAU- ||| :||| :| ||:||||: CCGCAGAGAUAAG-GCCUGUUGCUGU Skap2; Scap2; Skap55r rno-miR-17 68 106 -UGAU---------GGACGU---GACAUUCGUGAAAC- :||: :|||: ||| ||||:||||| UGCUGGCACAGAAGUCUGUCCAUCUGCAAGCGCUUUGG Skap2; Scap2; Skap55r rno-miR-18 113 132 AUAGACGUGAUCUACGUGGAAU |||| ||:|| |||||| --ACUGC-CUGGAGCCACCUUC Skap2; Scap2; Skap55r rno-miR-184 61 91 UGGGAAUA-------GUCAAGAGGCAGGU- ||||| ||| ||:||||| CCCCUUUUGCUGGCACAGAAGUCUGUCCAU Skap2; Scap2; Skap55r rno-miR-186 292 316 UUCGGGUUUUCCUCUUAAGAAAC- :|: : ||:|||||| ||| UGGUUUGUAUGGGGAAUUCAUUGU Skap2; Scap2; Skap55r rno-miR-194 233 266 AGGUGUA------CCU--CAACGACAA--UGU- ||:|| || ||||||||| :|| GCCGCAGAGAUAAGGCCUGUUGCUGUUUCGCAG Skap2; Scap2; Skap55r rno-miR-196a 86 122 -GGU---UGU---UGUA--CU-----UUGAUGGAU- ||| :|| :| || :|||:|||: UCCAUCUGCAAGCGCUUUGGAACACAGACUGCCUGG Skap2; Scap2; Skap55r rno-miR-196b 86 122 -GGU---UGU---UGU--CCU-----UUGAUGGAU- ||| :|| :| ||| :|||:|||: UCCAUCUGCAAGCGCUUUGGAACACAGACUGCCUGG Skap2; Scap2; Skap55r rno-miR-199a 353 382 CUUGUCCAUCAGACUU---------GUGACCC- |||| ||| ||||||| ---AAGGUUG-CUGUUUCUCGUAGUCACUGGGU Skap2; Scap2; Skap55r rno-miR-206 123 149 GGUGUGUGAAGGAAUGU------AAGGU | ||| ||||||| : |||| GC-CAC-CUUCCUUUGGGAGACCUUCCU Skap2; Scap2; Skap55r rno-miR-20a 88 106 GAUGGACGUGAUAUUCGUGAAAU- |:||||| |||:||||: -CAUCUGCA-----AGCGCUUUGG Skap2; Scap2; Skap55r rno-miR-20b 88 106 -UGGACGUGAUACUCGUGAAAC- |:||||| |||:||||| CAUCUGCA-----AGCGCUUUGG Skap2; Scap2; Skap55r rno-miR-20b* 75 97 -GUCUUCA--CGAGUGUGACGUCA ||||||| |: ||: ||||| ACAGAAGUCUGUCCAU-CUGCAA- Skap2; Scap2; Skap55r rno-miR-214 113 161 -GACGGAC------------AGAC-----------ACGGA CGACA ||||||| |:|| ||||| ||||| ACUGCCUGGAGCCACCUUCCUUUGGGAGACCUUCCUGCCUCAGCUGUC Skap2; Scap2; Skap55r rno-miR-215 359 386 CAGACAGU-----UUAGU-AUCCAGUA- ||||: |:||| |:|||:|| -GCUGUUUCUCGUAGUCACUGGGUUAUU Skap2; Scap2; Skap55r rno-miR-217 160 214 -UAGGU--CAG------------UCAAGGACUA------- CGUCAU :||| ||| || |||||| |||||: CGUCCUGUGUCGUCAUUCACUAAAGCUCCUGACGUCAGAUUAAGCAAGCAGUGA Skap2; Scap2; Skap55r rno-miR-27a 301 319 -CGCCUUGAAUCGGUGACACUU | ||||: :||:||||| UGGGGAAU----UCAUUGUGAU Skap2; Scap2; Skap55r rno-miR-291-3p 71 105 -CCGUGUGUUUCA----------CCUUCGUGAAA- |||||| :|||| | ||||:|||| UGGCACA-GAAGUCUGUCCAUCUGCAAGCGCUUUG Skap2; Scap2; Skap55r rno-miR-298 135 172 -CCUUCU-------------UGUCGGGAGGAGACGG- ||:||| :| |:| |||| ||:| UGGGAGACCUUCCUGCCUCAGCUGUCGUCCUGUGUCG Skap2; Scap2; Skap55r rno-miR-320 139 159 AAGC-GGGAGAGUUGG-GUCGAAAA | ||:|| | :|| ||||| --AGACCUUC-CUGCCUCAGCUG-- Skap2; Scap2; Skap55r rno-miR-324-3p 193 214 -GGUCG---UCGUGGACCCCGUCACC :||| |||| |||||| GUCAGAUUAAGCAA-----GCAGUGA Skap2; Scap2; Skap55r rno-miR-326 101 125 UGACCUCCU-UCC--CGGGUCUCC :|||| || |||::||| UUUGGAACACAGACUGCCUGGAGC Skap2; Scap2; Skap55r rno-miR-327 140 155 -UGGGAGUACGGGGAGUUCC |||:|| ||||:| GACCUUCCUGCCUCA----- Skap2; Scap2; Skap55r rno-miR-328 212 251 -UGCCU--------------UCC-CGUCUCUC--CCGGUC |:||: || ||||||| |||| GAUGGGUUACAUUAGAGACAAGCCGCAGAGAUAAGGCCU- Skap2; Scap2; Skap55r rno-miR-333 332 352 UUUUCAUUGA--UCGUGUGGUG- ||| |:| ||| |||||| --UAGUCAUUGAAGC-CACCACU Skap2; Scap2; Skap55r rno-miR-34c 92 121 -CGUUAGUCGA----UUGAUG--UGACGGA- |||| ||| ||| || ||||||| UGCAAGC-GCUUUGGAAC-ACAGACUGCCUG Skap2; Scap2; Skap55r rno-miR-350 291 319 CACUUUCACAUACCCGA-----AACACUU ||: |||||||| |||||| CUGGUU-UGUAUGGGGAAUUCAUUGUGAU Skap2; Scap2; Skap55r rno-miR-351 109 141 -GUCCGAGUUUCC-CG-----AGGAGUCCCU- ||| || || || ||||: |||| ACAGACUGCCUGGAGCCACCUUCCUUUGGGAG Skap2; Scap2; Skap55r rno-miR-424 343 366 AGGUUUUGUACU--UAACGACGAC ||| || ||| :||||||:| GCCACCAC-UGAAGGUUGCUGUUU Skap2; Scap2; Skap55r rno-miR-450 220 244 -GUAAUCCUUGUGUAGCGUUUUU- |||||| :||| ||||:|:| ACAUUAGAGACAAGCCGCAGAGAU Skap2; Scap2; Skap55r rno-miR-485 128 155 CUUAAGUAGUGCC-------GGUCGGAGA ||| |: || || ||||| --CUUCCUUUGGGAGACCUUCCUGCCUCA Skap2; Scap2; Skap55r rno-miR-493 117 148 -GACCGU-GUG--------UCAUCUGGAAGU |||| ||| :| |||||||| CCUGGAGCCACCUUCCUUUGGGAGACCUUCC Skap2; Scap2; Skap55r rno-miR-497 228 259 AUGUUUGGUGUCAC--------ACGACGAC- ||||:||:||| | ||:||||| GACAAGCCGCAGAGAUAAGGCCUGUUGCUGU Skap2; Scap2; Skap55r rno-miR-539 342 370 -UGUGUGGU----UCCUAU--UAAAGAGG :| ||||| ||| :|||||| AGC-CACCACUGAAGGUUGCUGUUUCUCG Skap2; Scap2; Skap55r rno-miR-7b 68 91 UUGUUUUAGUGU--UCAGA-AGGU- :| |||| ||||| |||| UGCUGG--CACAGAAGUCUGUCCAU Skap2; Scap2; Skap55r rno-miR-93 67 106 GAUGGACGUG-CU-------------UG-UCGUGAAAC- |:|: |||| || :| |||:||||| UUGCUGGCACAGAAGUCUGUCCAUCUGCAAGCGCUUUGG Skap2; Scap2; Skap55r rno-let-7b 133 154 uuggugUGUUGGAUGAUGGAGU | | |:| ||:||||| tttgggAGACCTTCCTGCCTCA Skap2; Scap2; Skap55r rno-let-7c 133 154 uugguaUGUUGGAUGAUGGAGU | | |:| ||:||||| tttgggAGACCTTCCTGCCTCA Skap2; Scap2; Skap55r rno-let-7e 134 154 ugauaUGUUGGAGGAUGGAGU | | |:||||:||||| ttgggAGACCTTCCTGCCTCA Skap2; Scap2; Skap55r rno-miR-100 289 306 GUGUUCAAGCCUAGAUGCCCaa ||| :|||:| ||:||| CACTGGTTTG----TATGGGga Skap2; Scap2; Skap55r rno-miR-101b 150 168 GAAGUCGAUAGUGUCAUGACAu | ||||||:|| || |||| CCTCAGCTGTC---GTCCTGTg Skap2; Scap2; Skap55r rno-miR-103 241 259 aguaUCGGGACAUGUUACGACGA || ||||| |||||:| gataAGGCCTGT----TGCTGTT Skap2; Scap2; Skap55r rno-miR-106b 81 104 uAGAC--GU-GACAGUCGUGAAAu |||| || ||| |||:|||| gTCTGTCCATCTGCAAGCGCTTTg Skap2; Scap2; Skap55r rno-miR-128a 299 317 uUUUCUCUGGCCAAGUGACACU | :|:|| ||||:||||| tATGGGGA---ATTCATTGTGA Skap2; Scap2; Skap55r rno-miR-128b 299 317 cUUUCUCUGGCCAAGUGACACU | :|:|| ||||:||||| tATGGGGA---ATTCATTGTGA Skap2; Scap2; Skap55r rno-miR-134 162 180 gGGAGACCAGUUGGUCAGUGu ||| | ||| ::|| |||| tCCTGT-GTC-GTCATTCACt Skap2; Scap2; Skap55r rno-miR-150 116 141 guGACCAUGUU----CCCAACCCUCU |||| :| | |||||||| gcCTGGAGCCACCTTCCTTTGGGAGA Skap2; Scap2; Skap55r rno-miR-15b 339 365 ACAUU--UGGU-ACUAC--ACGACGAu || |: |||| ||| | |||||:| TGAAGCCACCACTGAAGGTTGCTGTTt Skap2; Scap2; Skap55r rno-miR-16 235 257 GCGGUUAUA-AAUGCACGACGAu ||| :| || :| ||:|||| CGCAGAGATAAGGCCTGTTGCTg Skap2; Scap2; Skap55r rno-miR-17 78 104 ugaugGAC--GU-GACAUUCGUGAAAC ||| || ||| ||||:||||| gaagtCTGTCCATCTGCAAGCGCTTTG Skap2; Scap2; Skap55r rno-miR-18 111 131 auaGACGUGAUCUACGUGGAAu |||| ||:|| |||||| agaCTGC-CTGGAGCCACCTTc Skap2; Scap2; Skap55r rno-miR-196a 101 120 gguugUUGUACUUUGAUGGAu |||| |:|||:||| tttggAACA-CAGACTGCCTg Skap2; Scap2; Skap55r rno-miR-196b 104 120 ggUUGUUGUCCUUUGAUGGAu ||| |||| |||:||| ggAAC-ACAG---ACTGCCTg Skap2; Scap2; Skap55r rno-miR-199a 363 380 cuugucCAUCAGACUUGUGACCC ||||| ||||||| tttctcGTAGT-----CACTGGG Skap2; Scap2; Skap55r rno-miR-206 124 148 GGUGUGUGAAGGAA------UGUAAGGu |||| ||||||| || |||| CCAC---CTTCCTTTGGGAGACCTTCCt Skap2; Scap2; Skap55r rno-miR-20a 79 104 gaugGAC--GU-GAUAUUCGUGAAAu ||| || ||: ||||:|||| aagtCTGTCCATCTGCAAGCGCTTTg Skap2; Scap2; Skap55r rno-miR-20b 89 104 UGGACGUGAUACUCGUGAAAC |:||||| |||:||||| ATCTGCA-----AGCGCTTTG Skap2; Scap2; Skap55r rno-miR-20b* 76 97 GUCUUC--ACGAGUGUGACGUca |||||| ||: || ||||| CAGAAGTCTGTCCA-TCTGCAag Skap2; Scap2; Skap55r rno-miR-214 139 159 gacGGACAGACACGGA--CGACA ||| || ||||| ||||| agaCCT-TC-CTGCCTCAGCTGT Skap2; Scap2; Skap55r rno-miR-215 362 384 CAGACAGU-UUAGU-AUCCAGUA ||:| ||: |:||| |:|||:|| GTTTCTCGTAGTCACTGGGTTAT Skap2; Scap2; Skap55r rno-miR-217 185 212 uAGG--U-CAGUCAAGGAC-UACGUCAu ||| | ||||| |: | | ||||| cTCCTGACGTCAGATTAAGCAAGCAGTg Skap2; Scap2; Skap55r rno-miR-27a 302 318 CGCCUUGAAUCGGUGACACUu | ||||:| ||:||||| GGGGAATT----CATTGTGAt Skap2; Scap2; Skap55r rno-miR-291-3p 72 103 CCGUGUGUUU---C------ACCUUCGUGAAA |||||| ||: | || ||||:|||| GGCACAGAAGTCTGTCCATCTGCAAGCGCTTT Skap2; Scap2; Skap55r rno-miR-298 136 157 CCUUCUUGUCGGGAGGAGACGg ||:||| | ||: |||| || GGGAGACCTTCCTGCCTCAGCt Skap2; Scap2; Skap55r rno-miR-320 137 160 aagCGGGAGAGUUGG-GUCGAAAa | |||: | :|| ||||| | ggaGACCTTCCTGCCTCAGCTGTc Skap2; Scap2; Skap55r rno-miR-324-3p 192 213 ggucgucguggacccCGUCACc |||||| cgtcagattaagcaaGCAGTGa Skap2; Scap2; Skap55r rno-miR-327 141 157 UGGGAGUACGGGGAGUucc |||:|| || ||||| ACCTTCCTG--CCTCAgct Skap2; Scap2; Skap55r rno-miR-328 227 251 ugccUUC-CCGUCUC--UCCCGGuc ||| |||||| | |||| agacAAGCCGCAGAGATAAGGCCtg Skap2; Scap2; Skap55r rno-miR-333 330 350 uuuUCAUUGA--UCGUGUGGUG ||| |:| ||| |||||| cttAGTCATTGAAGC-CACCAC Skap2; Scap2; Skap55r rno-miR-34c 93 119 CGUUAGUCGA----UUG-AUGUGACGGA |||| | ||| ||| | ||||||| GCAAGC-GCTTTGGAACACAGACTGCCT Skap2; Scap2; Skap55r rno-miR-350 290 318 cacuuucACAUACCC-----GAAACACUu |||||||| | |||||| actggttTGTATGGGGAATTCATTGTGAt Skap2; Scap2; Skap55r rno-miR-351 110 139 GUCCGA-GUUUCCCG-----AGGAGUCCCU ||| || | :| || ||||: |||| CAGACTGCCTGGAGCCACCTTCCTTTGGGA Skap2; Scap2; Skap55r rno-miR-450 221 242 GUAAUCCUUGUGUAGCGUUUUU |||||| :||| : ||||:|:| CATTAGAGACAAGCCGCAGAGA Skap2; Scap2; Skap55r rno-miR-485 126 154 cuuAAGUAGUGCC-------GGUCGGAGa ||| |: || || ||||| accTTCCTTTGGGAGACCTTCCTGCCTCa Skap2; Scap2; Skap55r rno-miR-493 118 147 GACC---GUG------UGUCAUCUGGAAGu |||| ||| ::| |||||||| CTGGAGCCACCTTCCTTTGGGAGACCTTCc Skap2; Scap2; Skap55r rno-miR-539 344 369 uGU-GUGG-UUCCUAU--UAAAGAGg || |||: |||| |: :|||||| cCACCACTGAAGGTTGCTGTTTCTCg Skap2; Scap2; Skap55r rno-miR-93 87 104 GAUGGACGUGCUUGUCGUGAAAC | |:||||| |||:||||| CCATCTGCA-----AGCGCTTTG Skap2; Scap2; Skap55r rno-miR-150 134 141 GU-----------------GACCAUGUUCCC----AACCCUCU |||| :| |||||||| GCUUUGGAACACAGACUGCCUGGAGCCACCUUCCUUUGGGAGAC Skap2; Scap2; Skap55r rno-miR-493 140 147 -------------GACCGU-GUG--------UCAUCUGGAAGU |||| ||| :| |||||||| GAACACAGACUGCCUGGAGCCACCUUCCUUUGGGAGACCUUCC

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Skap2 RAID00466761 rno-miR-221-3p miRNA MIMAT0000890 Skap2 mRNA 155183 Prediction 0.1828 Skap2 RAID00687802 rno-miR-203a-3p miRNA MIMAT0000876 Skap2 mRNA 155183 Prediction 0.1828 Skap2 RAID00736910 rno-miR-28-5p miRNA MIMAT0000800 Skap2 mRNA 155183 Prediction 0.2202 Skap2 RAID00740217 rno-miR-96-5p miRNA MIMAT0000818 Skap2 mRNA 155183 Prediction 0.1828 Skap2 RAID01330749 rno-miR-330-5p miRNA MIMAT0004641 Skap2 mRNA 155183 Prediction 0.1828 Skap2 RAID01542894 rno-miR-7b miRNA MIMAT0000780 Skap2 mRNA 155183 Prediction 0.1828 Skap2 RAID01616464 rno-miR-21-3p miRNA MIMAT0004711 Skap2 mRNA 155183 Prediction 0.1828 Skap2 RAID01964065 rno-miR-708-5p miRNA MIMAT0005331 Skap2 mRNA 155183 Prediction 0.2202 Skap2 RAID02301459 rno-miR-150-5p miRNA MIMAT0000853 Skap2 mRNA 155183 Prediction 0.1828 Skap2 RAID02767970 rno-miR-222-3p miRNA MIMAT0000891 Skap2 mRNA 155183 Prediction 0.1828 Skap2 RAID02933399 rno-miR-183-5p miRNA MIMAT0000860 Skap2 mRNA 155183 Prediction 0.1828 Skap2 RAID02973888 rno-miR-411-5p miRNA MIMAT0005312 Skap2 mRNA 155183 Prediction 0.1828 Skap2 RAID02977370 rno-miR-539-5p miRNA MIMAT0003176 Skap2 mRNA 155183 Prediction 0.1828