DNA & RNA Element - miRNAMap |
Gene Name | Mature miRNA | Target Start | Target End | miRNA 3-5 | Alignment | Target 5-3 |
Ubac2; Phgdhl1; rCG_37124 | rno-let-7d | 17 | 40 | -UGAUACGUU---GGAUGAUGGAGA | || :||| |||:| ||| | GACAGUGCUGCGUCCUGCCACCA-- |
Ubac2; Phgdhl1; rCG_37124 | rno-let-7e | 17 | 37 | -UGAUAUGUUGGAGGAUGGAGU | || :|:| :| ||||:|| | GACAGUGCUGCGUCCUGCCA-- |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-101b | 2 | 28 | GAAGUCGAUAG-----UGUCAUGACAU | ||::|||: |||||:||| | AUUUGGCUGCUGAAAGACAGUGCUGC- |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-103 | 4 | 29 | AGUAUCGG-GACA---UGUUACGACGA | |:||: ||| |||:|||||| | --UUGGCUGCUGAAAGACAGUGCUGCG |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-107 | 4 | 29 | ACUAUCGG-GACA---UGUUACGACGA | |:||: ||| |||:|||||| | --UUGGCUGCUGAAAGACAGUGCUGCG |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-122a | 48 | 69 | UGUUUGUGGUAACAGUGUGAGGU- | :|: |||| || |||||| | -UGAGGACCAAA--CAGACUCCAG |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-125a | 68 | 98 | -GUGUCCAAU----UUCCCAGA-GUC-CCU | |||||| ||||| ||| || | GCACAGGCGUUCUCAAGGGGAGACAGUGGU |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-125b | 68 | 89 | AGUGUUCAAUCCCAGAGU-CCCU- | ||||:| | ||||| |||: | GCACAGGC---GUUCUCAAGGGGA |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-128a | 82 | 115 | -UUUUCUCUGG--CCAAG---------UGACACU | |:::||||| ||||| ||||| | AAGGGGAGACAGUGGUUCCCACCUUACACUGUC- |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-128b | 83 | 115 | CUUUCUCUGG--CCAAG---------UGACACU | :::||||| ||||| ||||| | AGGGGAGACAGUGGUUCCCACCUUACACUGUC- |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-138 | 34 | 48 | CUAAGUGUUGUGGUCGA | ||| |||:|||| | ---CCACCACAUCAGCC |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-146 | 43 | 84 | -UUGGGUACCUUAA--GU---------------CAAGAGU | |:||:: ||| || ||||||| | CAGCCUGAGGACCAAACAGACUCCAGCACAGGCGUUCUCAA |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-16 | 9 | 29 | GCGGUUAUAAAUG-CACGACGAU | ||::| || ||||||| | UGCUGAAAG--ACAGUGCUGCG- |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-184 | 6 | 33 | -UGG-GAAUA---GUCAAGAGGCAGGU | :|: || |||| || ||||| | GGCUGCUGAAAGACAGUGCUGCGUCCU |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-200a | 69 | 97 | -UGUA-GCAAUGG-------UCUGUCACAAU | ||| |||| |: |||||||| | CACAGGCGUU-CUCAAGGGGAGACAGUGG-- |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-204 | 71 | 91 | -UCCGUAUCCUACUGUUUCCCUU- | ||||:| |||:||||: | CAGGCGUUCU----CAAGGGGAGA |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-207 | 71 | 99 | UUCC-C------UCCUCUCGGUCCUCUUCG- | ||| | |||:||| ||| :|: | CAGGCGUUCUCAAGGGGAGACAGU---GGUU |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-211 | 67 | 91 | UCCGUUUCCUACU--GUUUCCCUU- | ||| ||| |||:||||: | -AGCACAGGCGUUCUCAAGGGGAGA |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-24 | 4 | 38 | GACAAGGACGACU--------UGACU-----CGGU- | || ||||||| :||| |||| | UUGG--CUGCUGAAAGACAGUGCUGCGUCCUGCCAC |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-31 | 5 | 37 | GUCGA-----------UACGGUCGUAGAACGGA | :||| :|||: ||:|| |||| | UGGCUGCUGAAAGACAGUGCU-GCGUCCUGCCA |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-324-3p | 64 | 98 | -GGUCG---UCGU----GGACCCC---GUCACC- | ||||| :||: | |||| |||||| | UCCAGCACAGGCGUUCUCAAGGGGAGACAGUGGU |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-327 | 61 | 87 | -UGGGAGUA-----CG-GGGAGUUCC- | ||:| || || ::||||||| | GACUC-CAGCACAGGCGUUCUCAAGGG |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-331 | 63 | 89 | AAGAUCCUAUCCGGG-----UCCCCG | || || |||| : ||||| | CUCCAGCACAGGCGUUCUCAAGGGGA |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-339 | 75 | 98 | ACUCGAGGACCUC-CUGUC-CCU | | ||| ||:| ||||| || | CGUUCUCAAGGGGAGACAGUGGU |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-346 | 70 | 94 | UCUCCGUCCGU--GAG--UCCGUCUGU- | |||||: ||| :|| ||||| | ----ACAGGCGUUCUCAAGGGGAGACAG |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-347 | 72 | 94 | ACCCGCU-GGG-UCUCC-CUGU- | |||| |:| ||:|| |||| | -AGGCGUUCUCAAGGGGAGACAG |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-34a | 5 | 27 | UUGUUGGUCGAU--UCUGUGACGGU | ::|: |||: ||||| |||: | --UGGCU-GCUGAAAGACAGUGCUG |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-351 | 70 | 98 | -GUCCG----AGUUUCCCGAGGAGUC-CCU | ||||| ||||:||| ||| || | ACAGGCGUUCUCAAGGGGAGA--CAGUGGU |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-363-5p | 24 | 40 | UUUAACGUAGCACUAGGUGGGC | |||:|| ||||| | ---CUGCGUCCUG--CCACCA- |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-370 | 43 | 77 | -UUGGUC-CAAGG------UGGGGUCGU--CCG- | |:|| | | || ||:|||||| ||| | CAGCCUGAGGACCAAACAGACUCCAGCACAGGCG |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-422b | 44 | 75 | -CGGAAGA---------CUGAGGUUCAGGUCA | |||| |||||||: ||| | AGCCUGAGGACCAAACAGACUCCAGCA-CAGG |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-485 | 26 | 50 | CUUAAGUAGUGCCGGU--------CGGAGA | |:|| | |||| |||| | ----GCGUC-CUGCCACCACAUCAGCCUG- |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-9 | 39 | 64 | AGUAUGUCGAUCUAUUGGUU--UCU- | ||| |||| || :||||| ||| | ACAU-CAGCCUGAGGACCAAACAGAC |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-98 | 16 | 37 | -UUGUUAUGUUGAAUGAUGGAGU | :|||:|:| :| ||:|| | AGACAGUGCUGCGUCCUGCCA-- |
Ubac2; Phgdhl1; rCG_37124 | rno-let-7d | 18 | 38 | UGAUACGUUGGAUGAUGGAGa | || :||| :| | ||:|| | | ACAGTGCTGCGTCCTGCCACc |
Ubac2; Phgdhl1; rCG_37124 | rno-let-7e | 18 | 38 | UGAUAUGUUGGAGGAUGGAGu | || :|:| :| ||||:|| | | ACAGTGCTGCGTCCTGCCACc |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-101b | 5 | 28 | gaaGUCGA--UAGUGUCAUGACau | | ||| | |||||:||| | tggCTGCTGAAAGACAGTGCTGcg |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-103 | 2 | 28 | aguAUCGG-GAC---AUGUUACGACGa | |:||: ||| |||:|||||| | attTGGCTGCTGAAAGACAGTGCTGCg |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-107 | 2 | 28 | acuAUCGG-GAC---AUGUUACGACGa | |:||: ||| |||:|||||| | attTGGCTGCTGAAAGACAGTGCTGCg |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-122a | 47 | 67 | uguUUGUGGUAACAGUGUGAGGU | |: |||| || |||||| | ctgAGGACCA--AACAGACTCCA |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-125a | 69 | 87 | GUGUCCAAUUUCCCAGAG-UCCCu | |||||| | |||| |||| | CACAGG-----CGTTCTCAAGGGg |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-128a | 83 | 115 | UUUUCUCUG--GCCAA---------GUGACAcu | |:::||||| :|||| |||||| | AGGGGAGACAGTGGTTCCCACCTTACACTGTcc |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-128b | 85 | 115 | CUUUCUCUGGCCAA---------GUGACAcu | |::||| | :|||| |||||| | GGGAGACAGTGGTTCCCACCTTACACTGTcc |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-138 | 31 | 47 | cuaaGUGUUGUGGUCGa | ||| |||:|||| | ctgcCACCACATCAGCc |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-141 | 1 | 26 | gGUAGA--AAUGG---UCUGUCACAAu | |||:| |:|: |||||||| | | -CATTTGGCTGCTGAAAGACAGTGCTg |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-146 | 61 | 82 | uuggguaccuuaaguCAAGAGU | ||||||| | gactccagcacaggcGTTCTCA |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-16 | 9 | 29 | gCGGUUAUAAAUG-CACGACGau | ||::| | || ||||||| | tGCTGAAA--GACAGTGCTGCgt |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-184 | 11 | 32 | ugggaauaGUCAAGAGGCAGGu | |||| || ||||| | ctgaaagaCAGTGCTGCGTCCt |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-187 | 5 | 23 | gCCGACGUUGUGUUCUGUgcu | |||||| :: |||||| | tGGCTGC--TGAAAGACAgtg |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-200a | 70 | 98 | UGU-AGCAAUGG------UCUGUCACAAu | ||| |||| :| |||||||| | | ACAGGCGTTCTCAAGGGGAGACAGTGGTt |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-204 | 66 | 89 | ucCGUAUC--CUACUGUUUCCCUu | ||| || | | |||:|||| | caGCACAGGCGTTCTCAAGGGGAg |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-207 | 67 | 94 | uucccUCCUCUCG-GU---CCUCU-UCg | ||| | | || ||||| || | agcacAGGCGTTCTCAAGGGGAGACAGt |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-211 | 66 | 89 | ucCGUUUC--CUACUGUUUCCCUu | ||| || | | |||:|||| | caGCACAGGCGTTCTCAAGGGGAg |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-24 | 24 | 56 | GAC-AAGGACG-------ACUU-GACUC--GGU | ||| |||||| | |: ||||| ||| | CTGCGTCCTGCCACCACATCAGCCTGAGGACCA |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-31 | 15 | 36 | gUC-GAUACGGUCGUAGAACGGa | || | :|||: ||:|| |||| | aAGACAGTGCT-GCGTCCTGCCa |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-324-3p | 65 | 96 | GGUCGU---CGU-GGA-----CC-CCGUCACC | |||||| ||: :|| || | |||||| | CCAGCACAGGCGTTCTCAAGGGGAGACAGTGG |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-327 | 64 | 85 | uGG--GAGUACG-GGGAGUUCC | || | || || ::||||||| | tCCAGCACAGGCGTTCTCAAGG |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-346 | 66 | 92 | ucuccGUCCGU--GAGU--CCGUCUGU | |||||: |||| || ||||| | cagcaCAGGCGTTCTCAAGGGGAGACA |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-347 | 71 | 92 | acCCGC-UGGG-UCUCC-CUGU | |||| |:| ||:|| |||| | caGGCGTTCTCAAGGGGAGACA |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-34a | 14 | 36 | UUGUUGGU-CGAUUCUGUGACGGU | || :|| : |||: | | |||||| | AAAGACAGTGCTGCGTC-CTGCCA |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-351 | 59 | 87 | GUCCGA----GUUUCCCGAGGAG-UCCCu | ||| || || ||| |:||| |||| | CAGACTCCAGCACAGGCGTTCTCAAGGGg |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-363-5p | 21 | 40 | uuuaACGUAGCACUAGGUGGgc | |||:|| || ||||| | gtgcTGCGTCCTG--CCACCac |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-370 | 44 | 75 | UUGG--UCCAAG---G--UGGGGUC--GUCCG | |:|| ||| | | ||:|||| ||||| | AGCCTGAGGACCAAACAGACTCCAGCACAGGC |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-422b | 45 | 69 | CGGAAGACUG---AGGUUCAGGUCa | |||| ||| | :| ||||| | GCCTGAGGACCAAACAGACTCCAGc |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-485 | 30 | 50 | cuuaaGUAGUGCCGGUCGGAga | || ||| :|||||| | cctgcCACCAC-ATCAGCCTga |
Ubac2; Phgdhl1; rCG_37124 | rno-miR-98 | 17 | 38 | uUGUUAUGUUGAAUGAUGGAGu | |||:|:| :| | ||:|| | | gACAGTGCTGCGTCCTGCCACc |