iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

DNA & RNA Element - microRNA
Mirbase Acc	miRNA Name	Gene ID	Gene Symbol	miRNA Alignment	Alignment	Gene Alignment	miRNA Start	miRNA End	Gene Start	Gene End	Genome Coordinates	Conservation	Align Score	Seed Cat	Energy	mirSVR Score
MIMAT0004726	rno-miR-101a*	116667	Map3k1	cguagucgugacACUAUUGACu	\| \|\|\|\|\|\|\|	gugacugacaaaUCAUAACUGc	2	11	118	139	[rn4:2:43062296-43062317:-]	0.6172	142	7	-9.09	-0.2965
MIMAT0005328	rno-miR-673	116667	Map3k1	gagguuCCUGGCCUCG-ACACUc	\| \|\|\| \|\|\| \|\|\|\|\|	gagcccGCACCUAAGCAUGUGAc	2	17	100	122	[rn4:2:43062313-43062335:-]	0.6172	120	0	-15.77	-0.4850
MIMAT0012841	rno-miR-675	116667	Map3k1	ugacacccgggaaaGGCGUGGu	\|\|\|\|\|\|\|	ggccaguggggagcCCGCACCu	2	9	90	111	[rn4:2:43062324-43062345:-]	0.6172	140	7	-23.71	-0.2277
MIMAT0000608	rno-miR-351	116667	Map3k1	aguccgaguuucccGAGGAGUCCCu	\|\| \|\|\|\|\|\|\|	----------ucaaCUGCUCAGGGu	2	12	1	15	[rn4:2:43062420-43062434:-]	0.7036	147	7	-18.57	-0.1554
MIMAT0000829	rno-miR-125a-5p	116667	Map3k1	aguguccaAUUUCCCAGAGUCCCu	\| \|\| \| \|\|\|\|\|\|\|	--------UCAACUG-CUCAGGGu	2	17	1	15	[rn4:2:43062420-43062434:-]	0.7036	142	7	-14.93	-0.1428
MIMAT0000830	rno-miR-125b-5p	116667	Map3k1	aguguucaaucccaGAGUCCCu	\|\|\|\|\|\|\|	-------ucaacugCUCAGGGu	2	9	1	15	[rn4:2:43062420-43062434:-]	0.7036	140	7	-14.93	-0.1600
MIMAT0000892	rno-miR-223	116667	Map3k1	ccccauaaacuguUUGACUGu	:\|\|\|\|\|\|	caccuaagcauguGACUGACa	2	9	107	127	[rn4:2:43062308-43062328:-]	0.6172	124	6	-11.31	-0.1310

DNA & RNA Element - TRANSFAC
Accession	AS	Description	Species	Entrez	Pubmed	Binding Info
G014129		Map3k1	Rattus norvegicus	116667

DNA & RNA Element - miRNAMap
Gene Name	Mature miRNA	Target Start	Target End	miRNA 3-5	Alignment	Target 5-3
LOC100912399; Map3k1	rno-let-7b	43	72	-UUGGUG----UGUUGGAUGA-UGGAGU-	\|:\|\|\|\| \|:\|::\|\|:\|\| :\|\|\|\|\|	CAGCCACGUUGAUAGUCUGCUGGCCUCAU
LOC100912399; Map3k1	rno-let-7c	43	72	-UUGGUA----UGUUGGAUGA-UGGAGU-	\|:\|\|\| \|:\|::\|\|:\|\| :\|\|\|\|\|	CAGCCACGUUGAUAGUCUGCUGGCCUCAU
LOC100912399; Map3k1	rno-let-7f	47	72	UUGAUA-UGUUAGAUGA-UGGAGU-	\|\| \|:\|:\|\|\|:\|\| :\|\|\|\|\|	CACGUUGAUAGUCUGCUGGCCUCAU
LOC100912399; Map3k1	rno-miR-126	5	20	CGUAAUAAUGAGUGCCAUGCU	\|:\|\|\|\| \|\|\|:\|\|	------CUGCUCAGGGUGCGC
LOC100912399; Map3k1	rno-miR-133a	60	97	UGUCGACCA-A--------------CUUC-CCCUGGUU-	\|\|\|\|\| \| \|\|\|\| \|\|\|:\|\|\|:	--UGCUGGCCUCAUACCACUGACCAGAAGAGGGGCCAGU
LOC100912399; Map3k1	rno-miR-133b	60	97	AUCGACCA-A--------------CUUC-CCCUGGUU-	\|\|\|\|\| \| \|\|\|\| \|\|\|:\|\|\|:	-UGCUGGCCUCAUACCACUGACCAGAAGAGGGGCCAGU
LOC100912399; Map3k1	rno-miR-134	34	54	GGGAGA--CCAGUUGGU-CAGUGU	\|\|\| \|\| \|\|:\|\|\| \|\|:	-ACUCGCGGG-CAGCCACGUUG--
LOC100912399; Map3k1	rno-miR-150	73	104	-GUGACCAUG---UUCCCAA-----CCCUCU	\|\|\|\|\| :\|\|\|\| \|\|\|\|\|	CCACUGACCAGAAGAGGGGCCAGUGGGGAGC
LOC100912399; Map3k1	rno-miR-151*	134	155	AUGAUCUGACACUCGAGG-AGCU	\|\|\|: \|\| \|\|\|\|\|\|\|\| \|\|	AACUGCACC-UGAGCUCCGUCU-
LOC100912399; Map3k1	rno-miR-154	36	63	-GCUUCCGUU-GUGC--CUAUUGGAU-	\|\| :\|\|\|\|: \|\|\|\| \|\|\|\|::\|\|:	UCGCGGGCAGCCACGUUGAUAGUCUGC
LOC100912399; Map3k1	rno-miR-181a	33	56	-UGAGUGGCUGUCG---CAACUUACAA	\|\|\|\|:\| \|:\|\|\|\| \|\|\|\|\|	AACUCGCGGGCAGCCACGUUGAU----
LOC100912399; Map3k1	rno-miR-184	137	156	-UG-GGAAUAGUCAAGAGGCAGGU	:\| \|\|\| \|\|\|\|\|\|\|:	UGCACCUGAG-----CUCCGUCUG
LOC100912399; Map3k1	rno-miR-193	61	98	-GACC------------CUGAAACA---UCCGGUCAA	\|\|\|\| \|\|\| :\|\|\|\|\|\|\|	GCUGGCCUCAUACCACUGACCAGAAGAGGGGCCAGUG
LOC100912399; Map3k1	rno-miR-207	85	105	UUCCCUCCUCUCGGUC-CUCUUCG-	\|\|\|\| :\|\|\|\|\| \|:\|:\|\|\|	---AGAGG--GGCCAGUGGGGAGCC
LOC100912399; Map3k1	rno-miR-20b*	145	160	GUCUUCACGAGUGU-GACGUCA	\|\|\|\| \|: \|\|\|\|\|\|	------AGCUC-CGUCUGCAGA
LOC100912399; Map3k1	rno-miR-214	44	66	GACGGA-CAGACA-CGGACGACA	\|\|\| \|\|: \|:\|\|\|\|\|\|	-AGCCACGUUGAUAGUCUGCUGG
LOC100912399; Map3k1	rno-miR-25	155	179	AGUCUGGCUCUGUU---CACGUUAC	\|\|\|\|\| \| \|\|\|\| \|\|\|\|\|:	GCAGACGGCUACAACUCGUGCAGG-
LOC100912399; Map3k1	rno-miR-28	129	152	GAGUUAUCUGAC----ACUCGAGGAA	\|\|\| \|\|\|\| \|\|\|\|\|\|\|\|	AUCAUA--ACUGCACCUGAGCUCCG-
LOC100912399; Map3k1	rno-miR-291-5p	39	57	UCUCUCCCGGAGGUGAAACUAC	\|\|\|\| \|\|\|\| \|\|\|\|\|	----CGGGCAGCCACGUUGAUA
LOC100912399; Map3k1	rno-miR-296	86	107	UGUCCUAACUCCCCCC-CGGGA	\|\|\|: \|\| \|\|\|\| \|\|\|\|	-GAGGGGCCAGUGGGGAGCCCG
LOC100912399; Map3k1	rno-miR-30a-3p	105	127	CGACGU----UUGUAGGCUGACUUUC	\|\|\| \|:\|\|\| :\|\|\|\|\|\|	--CGCACCUAAGCAUGUGACUGAC--
LOC100912399; Map3k1	rno-miR-324-3p	79	100	-GGUCGUCGUGGACCCCG-UCACC-	\|\|\|\| \|\| \|\|\|\|\| \|\|\|\|\|	ACCAGAAGA----GGGGCCAGUGGG
LOC100912399; Map3k1	rno-miR-324-5p	69	101	-UGUGGUUAC-GGGA---UCCCC---UACGC-	\|:\|\|\|\| \|\| \|\| \|\|\|\|\| :\|\| \|	CAUACCACUGACCAGAAGAGGGGCCAGUGGGG
LOC100912399; Map3k1	rno-miR-326	74	102	-UGAC----CUCCUUCCCGGGU-CUCC-	\|\|\|\| \|\| \|\|:\|\|\|\|\| \|:\|\|	CACUGACCAGAAGAGGGGCCAGUGGGGA
LOC100912399; Map3k1	rno-miR-328	85	106	UGCCUUCCC-GUCUCUCC-CGGUC	\|\|:\|\|\| \|\|\| \|:\|\| \|\|\|	--AGAGGGGCCAGUGGGGAGCCC-
LOC100912399; Map3k1	rno-miR-331	85	102	AAGAUCCUAUCCGGGU-CCCCG	\|\| :\|\|\|\| \|\|\|\|	-----AGAGGGGCCAGUGGGGA
LOC100912399; Map3k1	rno-miR-333	52	78	-UUUUCAU-UGAUCG---UGUGGUG-	:\| \|\|\| :\|\|:\|\| \|:\|\|\|\|\|	UGAUAGUCUGCUGGCCUCAUACCACU
LOC100912399; Map3k1	rno-miR-337	160	184	UUUCCGU-----AGUAUAUCCUCGACUU	\|\|\| \|\|:\|: \|\|\|\|\|\|\|\|	--CGGCUACAACUCGUGCAGGAGCUG--
LOC100912399; Map3k1	rno-miR-338	18	67	AGUUGUUUU---------AGUG------------ACU-----ACGACCU	\|\|\|\|\|\|:: \|\|:\| \|\|\| \|\|\|\|\|\|	GCAACAAGGAAAGAAAACUCGCGGGCAGCCACGUUGAUAGUCUGCUGGC
LOC100912399; Map3k1	rno-miR-339	142	180	-ACUCGAGGAC-----CU-CC-----------UGUCCCU	\|\|\|\|\|\|\|\| \|\| \|\| :\|\|\|\|	CUGAGCUCCGUCUGCAGACGGCUACAACUCGUGCAGGA-
LOC100912399; Map3k1	rno-miR-340	137	164	CCGAUAUUUCAUU---GAC-UCUGCCU	\|\| :\|\| \|\|\| \|\|\|\|\|\|	UGCACCUGAGCUCCGUCUGCAGACGGC
LOC100912399; Map3k1	rno-miR-343	88	104	AGACCCGUGUGCCUCCCUCU	\|\|\|\| \|\| \| :\|\|\|\|\|	--GGGGC-CA-GUGGGGAGC
LOC100912399; Map3k1	rno-miR-345	73	98	CGUGACCUGA-----UCCCCAGUCGU	\|\|\|\| \|\|\| \|\|\|\|\| \|\|\|:	CCACU-GACCAGAAGAGGGGCCAGUG
LOC100912399; Map3k1	rno-miR-346	10	50	UCUCCGUC-CG--------------UGAG--UCCGUCUGU	\|\|\| \| \|\| \|\|\|\| :\|\|\|\|\| \|\|	-CAGGGUGCGCAACAAGGAAAGAAAACUCGCGGGCAGCCAC
LOC100912399; Map3k1	rno-miR-347	63	94	ACCCG-----------CUGGG--UCUCCCUGU	\|\|\| \|\|\|\| \|\|\|\|\|\|:\|	-UGGCCUCAUACCACUGACCAGAAGAGGGGCC
LOC100912399; Map3k1	rno-miR-34a	40	65	-UUGUUGGU-CGAUUCUGUGACGGU	::\|\|:\|\|\| \|:\|:\| \| \|\|\|\|:	GGGCAGCCACGUUGAUAGUCUGCUG
LOC100912399; Map3k1	rno-miR-34c	54	83	CGUUAGUCGAUUG----AU-GUGAC-GGA	:\|:\|\| \|\|\|::\| \|\| \|\|\|\|\| \|\|	AUAGUCUGCUGGCCUCAUACCACUGACCA
LOC100912399; Map3k1	rno-miR-363-3p	154	179	-UGUCUACCUAUG----GCACGUUAA	:\|\|\|\| \|\| \|\|\| \|\|\|\|\|\|:	UGCAGACGGCUACAACUCGUGCAGG-
LOC100912399; Map3k1	rno-miR-370	89	121	-UUGGUC-CAA----GGUG-GGG-UCGUCCG-	::\|\|\|\| \| \|\|:\| \|\|: \|\|\|\| \|:	GGGCCAGUGGGGAGCCCGCACCUAAGCAUGUG
LOC100912399; Map3k1	rno-miR-379	47	65	AUGCAAGGUAUCAGAUGGU	\|\|\| \|: \|\|\|\|\|\|\|:\|:	CACG-UUGAUAGUCUGCUG
LOC100912399; Map3k1	rno-miR-382	147	166	CUUAGGU-GGUGCUUGUUGAAG	\|\|\|: \|::\| :\|\|::\|\|	--CUCCGUCUGCAGACGGCUA-
LOC100912399; Map3k1	rno-miR-431	153	181	-ACGUACUGCCGG--------ACGUUCUGU	\|\|\|\| \|\|\|\|\|\|: \|\|\|\|:\|\|	CUGCA-GACGGCUACAACUCGUGCAGGAG-
LOC100912399; Map3k1	rno-miR-449	44	69	-UGGU-CGAUUGUUAUGUGAC-GGU	:\|\|\| \|:\|:\|:\|:\| ::\|\|\| \|\|	AGCCACGUUGAUAGUCUGCUGGCCU
LOC100912399; Map3k1	rno-miR-485	35	49	CUUAAGUAGUGCCGGUCGGAGA	\|\|:\|\|\| \|\|\|\|\|	------CUCGCGGGCAGCCA--
LOC100912399; Map3k1	rno-miR-497	41	66	AUGUUUGGUGUCACA--C-GACGAC-	:\| \|:\|\|\|\|: \|\| \| \|\|\|\|\|\|	GGC-AGCCACGUUGAUAGUCUGCUGG
LOC100912399; Map3k1	rno-miR-540	38	70	GGUCC-------UAGCUGGA----GACUGGA-	\|:\|\| :\|:\|\|: \|\|\|:\|\|\|	GCGGGCAGCCACGUUGAUAGUCUGCUGGCCUC
LOC100912399; Map3k1	rno-let-7b	44	70	UUGGUG----UGUUGGAUGA-UGGAGU	\|:\|\|\|\| \|:\|::\|\|:\|\| :\|\|\|\|\|	AGCCACGTTGATAGTCTGCTGGCCTCA
LOC100912399; Map3k1	rno-let-7c	44	70	UUGGU---A-UGUUGGAUGA-UGGAGU	\|:\|\|\| \| \|:\|::\|\|:\|\| :\|\|\|\|\|	AGCCACGTTGATAGTCTGCTGGCCTCA
LOC100912399; Map3k1	rno-let-7f	48	70	uugauaUGUUAGAUGA-UGGAGU	\|:\|:\|\|\|:\|\| :\|\|\|\|\|	acgttgATAGTCTGCTGGCCTCA
LOC100912399; Map3k1	rno-miR-126	1	19	cguaaUAAUGAGUGCCAUGCu	\| \|:\|\|\|\| \|\|\|:\|\|	--tcaACTGCTCAGGGTGCGc
LOC100912399; Map3k1	rno-miR-133a	72	95	UGUCGAC-CAACUUC-CCCUGGUu	\|\| \|\|\| \|\|\|\| \|\|\|:\|\|\|	ACCACTGACCAGAAGAGGGGCCAg
LOC100912399; Map3k1	rno-miR-133b	74	95	aucgaccaaCUUC-CCCUGGUu	\|\|\|\| \|\|\|:\|\|\|	cactgaccaGAAGAGGGGCCAg
LOC100912399; Map3k1	rno-miR-134	31	50	gggaGACCAGUUGGUCAGUGu	\|\| \| \|:: \|\|\| \|\|\|	aaaaCTCG-CGGGCAGCCACg
LOC100912399; Map3k1	rno-miR-150	74	103	GUGAC----CAUGUUCC----CAACCCUCu	\|\|\|\|\| \| \| \|:\|\| \|\| \|\|\|\|\|	CACTGACCAGAAGAGGGGCCAGTGGGGAGc
LOC100912399; Map3k1	rno-miR-151*	134	155	aUGAUCUGACACUCGAGG-AGcu	\|\|\|: \|\| \|\|\|\|\|\|\|\| \|\|	aACTGCAC-CTGAGCTCCGTCtg
LOC100912399; Map3k1	rno-miR-154	37	61	GCUUCCGUU-GUGC--CUAUUGGAu	\|\| :\|\|\|\|: \|\|\|\| \|\|\|\|::\|\|	CGCGGGCAGCCACGTTGATAGTCTg
LOC100912399; Map3k1	rno-miR-181a	34	59	UGAGUGGCUGUC---GCAACUUACAa	\|\|\|\|:\| \|:\|\|\| \|\|\|\|\|\| \|\|	ACTCGCGGGCAGCCACGTTGATAGTc
LOC100912399; Map3k1	rno-miR-184	134	155	UGGGAAUAGUCAAGAGGCAGgu	\| \|: \| \| \| \|\|\|\|\|\|\|	AACTGCACCTGAGCTCCGTCtg
LOC100912399; Map3k1	rno-miR-193	77	97	gacccugaaacauCCGGUCAa	\|\|\|\|\|\|\|	tgaccagaagaggGGCCAGTg
LOC100912399; Map3k1	rno-miR-207	80	103	uucCCUCCUCUCGGUC-CUCUUCG	\| \|\| :\|:\|\|\|\|\| \|:\|:\|\|\|	ccaGAAGAGGGGCCAGTGGGGAGC
LOC100912399; Map3k1	rno-miR-20b*	139	159	GUCUUCACGAGUGUGACGUCa	\|\| \| \|\|\|\| \|\|\|\|\|\|	CACCTGAGCTCCGTCTGCAGa
LOC100912399; Map3k1	rno-miR-214	43	65	GACGG-ACAGACA-CGGACGACa	\| \|\|\| \|\|: \| \|:\|\|\|\|\|\|	CAGCCACGTTGATAGTCTGCTGg
LOC100912399; Map3k1	rno-miR-25	155	179	aGUCUGGCUCUGUU---CACGUuac	\|\|\|\|\| \| \|\|\|\| \|\|\|\|\|	gCAGACGGCTACAACTCGTGCAgga
LOC100912399; Map3k1	rno-miR-28	129	152	gAGUUAUCUGAC----ACUCGAGGaa	\|\| \|\|\| \|\|\|\| \|\|\|\|\|\|\|\|	aTC-ATA-ACTGCACCTGAGCTCCgt
LOC100912399; Map3k1	rno-miR-291-5p	35	56	ucuCUCCCGGAGGUGAAACUAc	\| \|\|\|\| \|\|\|\| \|\|\|\|\|	ctcGCGGGCAGCCACGTTGATa
LOC100912399; Map3k1	rno-miR-296	85	106	UGUCCUAACUCCCCCC-CGGGa	\| \|\|\|: \|\| \|\|\|\| \|\|\|\|	AGAGGGGCCAGTGGGGAGCCCg
LOC100912399; Map3k1	rno-miR-30a-3p	106	128	CGACG-UUUGUAGGCUGACUUUc	\|\| \| \|\|:\|\|\| :\|\|\|\|\|\| \|	GCACCTAAGCATGTGACTGACAa
LOC100912399; Map3k1	rno-miR-324-3p	80	98	GGUCGUCGUGGACCCC-GUCACC	\|\|\|\| \|\| \| \|\|\|\| \|\|\|\|\|\|	CCAGAAG-A---GGGGCCAGTGG
LOC100912399; Map3k1	rno-miR-324-5p	70	104	UGUGGUUAC-GG----------GAUC-CCCUACGc	\|:\|\|\|\| \|\| \|\| \| \|\| \|\|\|: \|\|	ATACCACTGACCAGAAGAGGGGCCAGTGGGGAGCc
LOC100912399; Map3k1	rno-miR-326	75	98	UGAC----CUCCUUCCCGGGUCUCC	\|\|\|\| \|\| \| \|\|\|\| \|\|\|\| \|\|	ACTGACCAGAAG-AGGGGCCAGTGG
LOC100912399; Map3k1	rno-miR-328	75	95	UGCCUUCCCGUCUCUCCCGGUC	\|\| \|\| \| \|\|\| :\|\|\|\|\|\|\|	ACTGACCAGAAGA-GGGGCCAG
LOC100912399; Map3k1	rno-miR-331	78	100	aaGAUCCUAU-CCGGGUC-CCCg	\| \|\| \| \| \|\| \|\|\|\| \|\|\|	gaCCAGAAGAGGGGCCAGTGGGg
LOC100912399; Map3k1	rno-miR-333	53	76	uUUUCA-UUGAUC---GUGUGGUG	\| \|\|\| :\|\|:\| \|\|:\|\|\|\|\|	gATAGTCTGCTGGCCTCATACCAC
LOC100912399; Map3k1	rno-miR-337	158	183	uUUCCG----U-AGUAUAUCCUCGACuu	\| \|\|\| \| \|\|:\|: \|\|\|\|\|\|\|\|	gACGGCTACAACTCGTGCAGGAGCTG--
LOC100912399; Map3k1	rno-miR-338	44	66	aguuguuuuagugacuACGACCu	\|\|\|\|\|\|	agccacgttgatagtcTGCTGGc
LOC100912399; Map3k1	rno-miR-339	143	165	ACUCGAG---GACCUCCUGUCccu	\|\|\|\|\|\|\| \|\|\| \| \|\|\|:\|	TGAGCTCCGTCTGCA-GACGGcta
LOC100912399; Map3k1	rno-miR-340	140	163	ccgauauuucauuGAC-UCUGCCu	\|\|\| \|\|\|\|\|\|	acctgagctccgtCTGCAGACGGc
LOC100912399; Map3k1	rno-miR-343	86	103	agaCCCGUGUGCCUCCCUCu	\|\|\|\| \|\| \| :\|\|\|\|\|	gagGGGC-CA-GTGGGGAGc
LOC100912399; Map3k1	rno-miR-346	22	48	ucUCCGUCC----GUGAGUCCGUCUGU	\|\|\| \| \| \| \| \|:\|\|\|\|\| \|\|	caAGGAAAGAAAACTCGCGGGCAGCCA
LOC100912399; Map3k1	rno-miR-347	73	93	acccgCUGG--GUCUCCCUGu	\|\|\|\| \|\|\|\|\|\|:\|	ccactGACCAGAAGAGGGGCc
LOC100912399; Map3k1	rno-miR-34a	57	82	uuGUUGGUC-GAUUCU-GUGAC-GGU	\| :\|::\| \|\| \| \| \|\|\|\|\| \|\|\|	gtCTGCTGGCCTCATACCACTGACCA
LOC100912399; Map3k1	rno-miR-363-3p	155	179	uGUCUACCUAUG----GCACGUuaa	\|\|\|\| \|\| \|\|\| \|\|\|\|\|\|	gCAGACGGCTACAACTCGTGCAgga
LOC100912399; Map3k1	rno-miR-370	78	100	uUGGUCCAAGGUGGGGUCGUCCg	\|\|\|\|\| : \|\|\|\|::\|\|	gACCAGAAGAGGGGCCAGTGGGg
LOC100912399; Map3k1	rno-miR-382	144	172	CUU-AGGUGG-----UGCU--UGUUGAag	\|\|: \|\|\|::\| \|\|\|: \|\|\|\|\|\|	GAGCTCCGTCTGCAGACGGCTACAACTcg
LOC100912399; Map3k1	rno-miR-431	154	181	ACGUACUGCCG-------G-ACGUUCUgu	\|\|\|\| \|\|\|\|\|\| \| \|\|\|\|:\|\|	TGCA-GACGGCTACAACTCGTGCAGGAgc
LOC100912399; Map3k1	rno-miR-449	57	82	ugGUCGAUUG--UUAU-GUGAC-GGU	\| \|\|\|::\| \|\|\| \|\|\|\|\| \|\|\|	gtCTGCTGGCCTCATACCACTGACCA
LOC100912399; Map3k1	rno-miR-485	30	50	CUUAAGUAGUGCCGGUCGGAGa	\|\|\| \| \|\|:\|\|\| \|\|\|\|\| \|	GAAAAC-TCGCGGGCAGCCACg
LOC100912399; Map3k1	rno-miR-497	40	67	auguUUGGUG------UCACACGACgac	\|:\|\|\|\| \|\|\| \|\|\|\|\|	gggcAGCCACGTTGATAGTCTGCTGgcc
LOC100912399; Map3k1	rno-miR-540	62	82	GGUCCUAG-CUGGAGACUGGa	\|::\| \|\| \|\|\| \|\|\|\|\|\|	CTGGCCTCATACCACTGACCa
LOC100912399; Map3k1	rno-miR-193	90	97	-------GACC------------CUGAAACA---UCCGGUCAA	\|\|\|\| \|\|\| :\|\|\|\|\|\|\|	UAGUCUGCUGGCCUCAUACCACUGACCAGAAGAGGGGCCAGUG

DNA & RNA Element - RAID2
Gene Name	RAID ID	Interactor 1	Category 1	ID 1	Interactor 2	Category 2	ID 2	Methods	Score
Map3k1	RAID00400528	rno-miR-125a-5p	miRNA	MIMAT0000829	Map3k1	mRNA	116667	Prediction	0.1828
Map3k1	RAID00490941	rno-miR-223-3p	miRNA	MIMAT0000892	Map3k1	mRNA	116667	Prediction	0.1828
LOC100912399	RAID01735634	rno-miR-9a-5p	miRNA	MIMAT0000781	LOC100912399	mRNA	100912399	Prediction	0.1828
LOC100912399	RAID02479837	rno-miR-9b-3p	miRNA	MIMAT0017836	LOC100912399	mRNA	100912399	Prediction	0.1828
LOC100912399	RAID02803915	rno-miR-743b-3p	miRNA	MIMAT0005280	LOC100912399	mRNA	100912399	Prediction	0.1828
LOC100912399	RAID02994418	rno-miR-505-3p	miRNA	MIMAT0003380	LOC100912399	mRNA	100912399	Prediction	0.1828
Map3k1	RAID03616154	rno-miR-125b-5p	miRNA	MIMAT0000830	Map3k1	mRNA	116667	Prediction	0.1828
LOC100912399	RAID03773980	rno-miR-18a-5p	miRNA	MIMAT0000787	LOC100912399	mRNA	100912399	Prediction	0.1828
Map3k1	RAID04005668	rno-miR-351-5p	miRNA	MIMAT0000608	Map3k1	mRNA	116667	Prediction	0.1828