LOC100911993
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0000547rno-miR-322*362636Usp48acaaCGUCGCG--AAGUACAAa |||| |: ||||||| gcagGCAGAGUAAAUCAUGUUu217255276[rn4:5:156416119-156416140:+]0.68501477-14.79-0.5947
MIMAT0004652rno-miR-342-5p362636Usp48gaguuagugucuauCGUGGGGa ||||||| uugguaggaccucuGCACCCCu2914441465[rn4:5:156417308-156417329:+]0.50651407-18.17-0.3012
MIMAT0000591rno-miR-343362636Usp48agACCCGUGUG-CCUCCCUCu || :|||| |||||||| caUGUUUACACAGGAGGGAGu219270290[rn4:5:156416134-156416154:+]0.68501617-25.99-0.4166
MIMAT0000591rno-miR-343362636Usp48agacccgugugCCUCCCUCu |||||||| uauuuagggugGGAGGGAGa210218237[rn4:5:156416082-156416101:+]0.68501457-24.41-0.2365
MIMAT0000592rno-miR-344-3p362636Usp48ugccaGUC-CGAAACCGAUC-UAGu ||| | | |||||| ||| ugucaCAGUACAUGGGCUAGCAUCc219337361[rn4:5:156416201-156416225:+]0.68501210-15.22-0.1349
MIMAT0000607rno-miR-7a*362636Usp48uaccGUCUGACACUAAACAACa ||||:| | ||||||| cacaCAGAUUUU--UUUGUUGu2199871006[rn4:5:156416851-156416870:+]0.51831557-15.64-0.5947
MIMAT0000783rno-miR-10b362636Usp48uguGUUUAAGCCAAGAUGUCCc | :|| | | ||||||| cuuCUGAUAC-AUCCUACAGGg220782802[rn4:5:156416646-156416666:+]0.51831457-16.67-0.1034
MIMAT0004731rno-miR-125b*362636Usp48uccAGGGUUCUCGGACUGAACa ||:|||| ||||||| aacUCUCAAG----UGACUUGu220369386[rn4:5:156416233-156416250:+]0.68501507-18.02-0.1952
MIMAT0004739rno-miR-204*362636Usp48uugcAGGGAAAC-GGAAGGGUCg |:|:|||| |:||||||| auguUUCUUUUGUCUUUCCCAGa21919972019[rn4:5:156417861-156417883:+]0.52511697-27.16-0.4106
MIMAT0000884rno-miR-181a*362636Usp48ccAUGUUAGUUGCCAGCU-ACCa |:| ||:: | ||||| ||| uuUGC-AUUGUCUGUCGAGUGGa221938959[rn4:5:156416802-156416823:+]0.51831220-12.60-0.3126
MIMAT0005280rno-miR-743b362636Usp48agAUAAGUCAUACCACAGAAAg || ||| | || ||||||| guUA-UCA-UUUGAUGUCUUUa22123002319[rn4:5:156418164-156418183:+]0.60821567-10.86-0.8284
MIMAT0005280rno-miR-743b362636Usp48agAUAAGUCAUACCACAGAAAg ||| : | | ||||||| uuUAUGU-UUCUUUUGUCUUUc22119942014[rn4:5:156417858-156417878:+]0.52511427-10.47-0.1820
MIMAT0005280rno-miR-743b362636Usp48agauaagucauaccACAGAAAg ||||||| cugcuaacccacccUGUCUUUg29400421[rn4:5:156416264-156416285:+]0.68501407-6.56-0.1052
MIMAT0005282rno-miR-872362636Usp48ggacuugAUU-GUUC-AUUGGAa ||| ||:| |||||| cacuaugUAACCAGGAUAACCUu21520542076[rn4:5:156417918-156417940:+]0.52511216-13.03-0.1577
MIMAT0005287rno-miR-879362636Usp48ccgaAUCUCGAUAUUCGGAGa || :| ||||||| cagaUAUGGGACCAAGCCUCa21813041324[rn4:5:156417168-156417188:+]0.51831417-12.89-0.1194
MIMAT0005323rno-miR-532-3p362636Usp48acguucgGAACCCACACCCUCc :|| || ||||||| uuuucuaUUUAGG-GUGGGAGg216213233[rn4:5:156416077-156416097:+]0.68501497-21.71-0.1116
MIMAT0005327rno-miR-672362636Usp48agUGUGUGUCAUGUGGUU-GGAGu ||| |:| : ||||| |||| ccACAGAUAUGGGACCAAGCCUCa22213011324[rn4:5:156417165-156417188:+]0.51831290-23.36-0.1194
MIMAT0005329rno-miR-674-5p362636Usp48auguGGUGAGGGU--AGAG-UCACg |::|||| | |||| |||| caucCUGCUCCAAACUCUCAAGUGa219357381[rn4:5:156416221-156416245:+]0.68501250-20.74-0.4735
MIMAT0005332rno-miR-708*362636Usp48gaucuucGAGUGU-CAGAUCAAc :|:| | ||||||| uuuuccuUUUAAAUCUCUAGUUu21610151037[rn4:5:156416879-156416901:+]0.51831427-7.23-0.5651
MIMAT0012825rno-miR-105362636Usp48ugGUGUCUGUAGAC-UCGU-GAAc | || ||||: | |||| ||| auCUCA-ACAUUAGCAGCAUCUUu22110661088[rn4:5:156416930-156416952:+]0.51831210-11.04-0.1152
MIMAT0012826rno-miR-220362636Usp48uccaGAGACUGUGACACCACc ||||| |:||||||| aaaaCUCUG--AUUGUGGUGu21811241142[rn4:5:156416988-156417006:+]0.51831587-22.07-0.4368
MIMAT0012829rno-miR-511362636Usp48acucacgucucGUUUUCCGUa ||||||||| ccuggcucuucCAAAAGGCAa211102122[rn4:5:156415966-156415986:+]0.68501507-13.55-0.9344
MIMAT0012830rno-miR-504362636Usp48cugucucacGUCUGGUCCCAGa |||| ||||||| ugucuuuccCAGA-CAGGGUCu21420072027[rn4:5:156417871-156417891:+]0.52511517-20.84-0.1101
MIMAT0012836rno-miR-628362636Usp48ggagagcauuuaUACAGUCGUa :|||||||| ggggcagacccaGUGUCAGCAa21116491670[rn4:5:156417513-156417534:+]0.49771467-17.78-0.1115
MIMAT0012846rno-miR-201362636Usp48uuCUUGUUACGGAAUGACUCa |: | :| |:|||||||| caGGUCUGUUCUUUACUGAGc22012791299[rn4:5:156417143-156417163:+]0.51831597-16.54-0.2158
MIMAT0012855rno-miR-666362636Usp48ccgaGAGU-GUCGGC---ACGGG-CGa ||:| ||||:| ||||| || uggaCUUAGCAGCUGCCAUGCCCUGCu21918461872[rn4:5:156417710-156417736:+]0.52181200-27.15-0.1475
MIMAT0000552rno-miR-301a362636Usp48cgaaacUGUUAUG-AUAACGUGAc |:|| :| |||||||| ugucaaAUAAAGCAGAUUGCACUg218157180[rn4:5:156416021-156416044:+]0.68501527-15.54-0.2536
MIMAT0000564rno-miR-328362636Usp48ugccuucccgucucUCCCGGUc ||||||| gccuacucuuucccAGGGCCAa2913351356[rn4:5:156417199-156417220:+]0.51831407-12.20-0.1401
MIMAT0000575rno-miR-335362636Usp48ugUAAAAAGCAAUAAC-GAGAACu | | | | |||| |||||| aaAGUAAUAGCCAUUGACUCUUGu22216101633[rn4:5:156417474-156417497:+]0.51461216-11.15-0.1170
MIMAT0000579rno-miR-148b-3p362636Usp48uguuucaagacaCU-ACGUGACu || ||||||| ucaaauaaagcaGAUUGCACUGg211159181[rn4:5:156416023-156416045:+]0.68501417-15.67-0.4353
MIMAT0000600rno-miR-129362636Usp48cguucGGGUCUGGCGUUUUUc :||| | ||||||| gcucuUCCAAAAGGCAAAAAu217106126[rn4:5:156415970-156415990:+]0.68501527-11.22-0.4178
MIMAT0000602rno-miR-20a362636Usp48gaUGGACGUGAUAUUCGU-GAAAu :::||| |||:||| |||| uuGUUUGC---AUAGGCAUCUUUu22215671587[rn4:5:156417431-156417451:+]0.53161210-16.10-0.2422
MIMAT0000606rno-miR-7a362636Usp48ugUUGUUUU---AGU-GAUC-AGAAGGu ||: ||| |:| ||:| |||||| agAAUUAAACUCUUACCUGGCUCUUCCa22287114[rn4:5:156415951-156415978:+]0.68501236-15.96-0.8069
MIMAT0000786rno-miR-17-5p362636Usp48gaUGGACGUGACAUUCGU-GAAAc :::|||| ||:||| |||| uuGUUUGCA---UAGGCAUCUUUu22215671587[rn4:5:156417431-156417451:+]0.53161210-15.20-0.2401
MIMAT0000788rno-miR-19b362636Usp48aguCAAAACGU-ACCUAAAC-GUGu | | |:| |||||||| ||| ccuGGUCAGUAGUGGAUUUGUCACa221319343[rn4:5:156416183-156416207:+]0.68501270-22.26-0.4759
MIMAT0000789rno-miR-19a362636Usp48aguCAAAACGU-AUCUAAAC-GUGu | | |:| |:|||||| ||| ccuGGUCAGUAGUGGAUUUGUCACa221319343[rn4:5:156416183-156416207:+]0.68501230-19.55-0.4759
MIMAT0000791rno-miR-22362636Usp48ugUCAAGAAGU--UGACCG-UCGAa :| ||| || || ||| |||| guGGCUCUACAGCACAGGCUAGCUc22119101934[rn4:5:156417774-156417798:+]0.52181230-14.77-0.1016
MIMAT0000792rno-miR-23a362636Usp48ccuuUAGGGACCGUUACACUa ||: | ||||||: gggcAUUAAAGAAAAUGUGGa2186282[rn4:5:156415926-156415946:+]0.68501250-11.30-0.1310
MIMAT0000793rno-miR-23b362636Usp48ccauUAGGGACCGUUACACUa ||: | ||||||: gggcAUUAAAGAAAAUGUGGa2186282[rn4:5:156415926-156415946:+]0.68501250-11.15-0.1310
MIMAT0000804rno-miR-30c362636Usp48cgacUCUCACAUCCUACAAAUGu ||||| | |||||||| aggcAGAGUAAAUCAUGUUUACa220257279[rn4:5:156416121-156416143:+]0.68501637-16.13-0.5900
MIMAT0000805rno-miR-30e362636Usp48gaaggUCAGUUCCUACAAAUGu ||| || |||||||| ggcagAGUAAAUCAUGUUUACa218258279[rn4:5:156416122-156416143:+]0.68501617-14.01-0.5900
MIMAT0000806rno-miR-30b-5p362636Usp48ucGACUCACAUCCUACAAAUGu | |||| | |||||||| ggCAGAGUAAAUCAUGUUUACa221258279[rn4:5:156416122-156416143:+]0.68501607-16.08-0.5900
MIMAT0000807rno-miR-30d362636Usp48gaaggucagccccUACAAAUGu |||||||| ggcagaguaaaucAUGUUUACa210258279[rn4:5:156416122-156416143:+]0.68501457-12.39-0.6010
MIMAT0000808rno-miR-30a362636Usp48gaaggUCAGCUCCUACAAAUGu ||| | |||||||| ggcagAGUAAAUCAUGUUUACa218258279[rn4:5:156416122-156416143:+]0.68501537-12.39-0.5974
MIMAT0000818rno-miR-96362636Usp48ucguuuuuacacgaucACGGUUu |||||| ucacuguuaaucuuucUGCCAAa2823682390[rn4:5:156418232-156418254:+]0.60821206-10.51-0.1038
MIMAT0000834rno-miR-128362636Usp48uuUCUCUGGCCAAGUGACACu ||| ::: | ||||||| ccAGAAGUUAG--CACUGUGa22015461564[rn4:5:156417410-156417428:+]0.52341447-15.80-0.2107
MIMAT0000836rno-miR-130a362636Usp48uacgggaaaauUGUAACGUGAc | |||||||| ucaaauaaagcAGAUUGCACUg212159180[rn4:5:156416023-156416044:+]0.68501477-14.17-0.2604
MIMAT0000837rno-miR-130b362636Usp48uacgggaaaguagUAACGUGAc |||||||| ucaaauaaagcagAUUGCACUg210159180[rn4:5:156416023-156416044:+]0.68501457-15.75-0.2581
MIMAT0000845rno-miR-139-5p362636Usp48gaccucuGUGCACGUGACAUCu :|| | ||||||| aguccauUACCAG-ACUGUAGg21622802300[rn4:5:156418144-156418164:+]0.60821417-11.20-0.1695
MIMAT0000854rno-miR-152362636Usp48gguucaagacaguACGUGACu ||||||| aaauaaagcagauUGCACUGg29161181[rn4:5:156416025-156416045:+]0.68501407-12.10-0.4353
MIMAT0000856rno-miR-154362636Usp48gcuUCCGUUGUGCCUAUUGGAu | |:||| ||||||||| acuAUGUAACCAGGAUAACCUu22020552076[rn4:5:156417919-156417940:+]0.52511677-20.42-0.1459
MIMAT0000862rno-miR-185362636Usp48agUCCUUGACGGAAAGAGAGGu |||: || || ||||||| acAGGGCGUG-CUGUCUCUCCa221832852[rn4:5:156416696-156416716:+]0.51831587-27.47-0.1166
MIMAT0000863rno-miR-186362636Usp48ucggguuuuccucuUAAGAAAc ||||||| guauauuucuaaucAUUCUUUa2922272248[rn4:5:156418091-156418112:+]0.60821407-5.38-0.7959
MIMAT0000876rno-miR-203362636Usp48gaucacCAGGAUUUGU-AAAGUg |||||:: || ||||| aguaaaGUCCUGGUCAGUUUCAc217288310[rn4:5:156416152-156416174:+]0.68501280-18.96-0.2782
MIMAT0000886rno-miR-216a362636Usp48agugUCAACGGUCG-ACUCUAAu |||| || : ||||||| cagaAGUUAGCACUGUGAGAUUg21915471569[rn4:5:156417411-156417433:+]0.52341537-18.27-0.1177
MIMAT0004742rno-miR-296362636Usp48ccuCUCGGAGGUG--GGUUGGGAg |:|::|::|: ||||||| cacGGGUUUUUAUAGACAACCCUc220707730[rn4:5:156416571-156416594:+]0.51831507-25.03-0.1819
MIMAT0001549rno-miR-365362636Usp48uauuccuaaaaaUCCCCGUAAu ||||||||| gauacauccuacAGGGGCAUUu211787808[rn4:5:156416651-156416672:+]0.51831507-15.82-0.1839
MIMAT0001549rno-miR-365362636Usp48uauuccuaAAAAUCCCCGUAAu | ||| ||||||| acuugaccUGUUA-GGGCAUUa2154969[rn4:5:156415913-156415933:+]0.68501487-12.67-1.1094
MIMAT0003117rno-miR-361362636Usp48cauggggaccucuAAGACUAUu |||||||| cugaaaaccauucUUCUGAUAc210770791[rn4:5:156416634-156416655:+]0.51831457-9.73-0.3065
MIMAT0003119rno-miR-224362636Usp48auuugccUUG-GUGAUCACUGAAc ||| | | |||||||| ugcuccaAACUCUCAAGUGACUUg217362385[rn4:5:156416226-156416249:+]0.68501557-16.77-0.4550
MIMAT0003193rno-miR-494362636Usp48uccaaaGGGCACAUACAAAGu |:: | |||||||| uccaggCUUCUUUAUGUUUCu21619842004[rn4:5:156417848-156417868:+]0.52351517-13.78-0.5454
MIMAT0003193rno-miR-494362636Usp48uccaaagggcacaUACAAAGu ||||||| agacuugaaggaaAUGUUUCa29190210[rn4:5:156416054-156416074:+]0.68501407-11.62-0.6952
MIMAT0005300rno-miR-182362636Usp48gccACACUCAAGAUGGUAACGGUUu || ||| : ||||||| gcaUGAAAGUGAAGGACUUGCCAAc223445469[rn4:5:156416309-156416333:+]0.67581427-12.22-0.1099
MIMAT0005300rno-miR-182362636Usp48gccacacucaagaugguaACGGUUu |||||| aaucacuguuaaucuuucUGCCAAa2823662390[rn4:5:156418230-156418254:+]0.60821206-11.67-0.1048
MIMAT0005304rno-miR-301b362636Usp48cgaaacUGUUAUG-GUAACGUGAc |:|| :| |||||||| ugucaaAUAAAGCAGAUUGCACUg218157180[rn4:5:156416021-156416044:+]0.68501527-15.86-0.2536
MIMAT0005309rno-miR-384-5p362636Usp48uguaaCGGAUC-CUUA--ACAAAUGu || || ||| ||||||| agcagGCAGAGUAAAUCAUGUUUACa219254279[rn4:5:156416118-156416143:+]0.68501447-12.63-0.6047
DNA & RNA Element - TRANSFAC
AccessionASDescriptionSpeciesEntrezPubmedBinding Info
G101596Usp48Rattus norvegicus362636
DNA & RNA Element - miRNAMap
Gene NameMature miRNATarget StartTarget EndmiRNA 3-5AlignmentTarget 5-3
LOC100911993; Usp48rno-miR-10b782802uguGUUUAAGCCAAGAUGUCCC | :|| | | ||||||||cttCTGATAC-ATCCTACAGGG
LOC100911993; Usp48rno-miR-128a15411564UUUUC--UCUGGCCAA--GUGACACU| ||| ||| ||| ||||||||ACAAGCCAGA--AGTTAGCACTGTGA
LOC100911993; Usp48rno-miR-128b15391564CUUUCUCUGGC--CAA--GUGACACU| | || | | ||| ||||||||GCACAAGCCAGAAGTTAGCACTGTGA
LOC100911993; Usp48rno-miR-130a156180UACGGGAAAAUU-G--UAACGUGAC|||:| | || | |||||||||ATGTCAAATAAAGCAGATTGCACTG
LOC100911993; Usp48rno-miR-130b149180uACGGGA-A-AG--UA----G--UAACGUGAC ||||:| | || || | |||||||||tTGCCTTATGTCAAATAAAGCAGATTGCACTG
LOC100911993; Usp48rno-miR-133a13031318UGUCGACCAACUUCCCCUGGUU|||| | | ||||||||ACAGAT------ATGGGACCAA
LOC100911993; Usp48rno-miR-133b12971318aucgaccaaCU-UCCCCUGGUU || | ||||||||agcaccacaGATATGGGACCAA
LOC100911993; Usp48rno-miR-140*18861912ACAGGC--AC-CAAGAUGGGACACCAu|||::| || ||||: |||||||TGTTTGGTTGTCTTCTGAACTGTGGTg
LOC100911993; Usp48rno-miR-152144181GGGUU--C--AAGACAGU------------ACGUGACu||||| | || ||||| |||||||CCCAATTGCCTTATGTCAAATAAAGCAGATTGCACTGg
LOC100911993; Usp48rno-miR-185835852CUUG-ACGGAAAGAGAGGU|::| || || ||||||||GGGCGTG-CTGTCTCTCCA
LOC100911993; Usp48rno-miR-20b*16971723GUCUUCA-CGAGU-----GUGACGUCa||| ||| || || ||||||||CAGCAGTCGCCCATCGCCCACTGCAGa
LOC100911993; Usp48rno-miR-21615451569guGUCAACGGUCG----ACUCUAAu ||| |::||| |||||||gcCAGAAGTTAGCACTGTGAGATTg
LOC100911993; Usp48rno-miR-224362385auuugccUUG-GUGAUCACUGAAC ||| | | |||||||||tgctccaAACTCTCAAGTGACTTG
LOC100911993; Usp48rno-miR-27a15461565cGCCUUGAAUCGGUGACACUu | ||| |||| ||||||||cCAGAAGTTAG-CACTGTGAg
LOC100911993; Usp48rno-miR-27b15461565cGUCUUGAAUCGGUGACACUu ||||| |||| ||||||||cCAGAAGTTAG-CACTGTGAg
LOC100911993; Usp48rno-miR-2812201241gagUUAUCUGACACUCGAGGAa |:|| | ||||||||aggAGTACTCACGGAGCTCCTg
LOC100911993; Usp48rno-miR-29814461460CCUUCUUGUCGGGAGGAGACGg|| ||:| |||||||GGTAGGA-------CCTCTGCa
LOC100911993; Usp48rno-miR-301149180uAC-GAA-ACUG-UUAU---G-AUAACGUGAC || ||| || | |||| | |||||||||tTGCCTTATGTCAAATAAAGCAGATTGCACTG
LOC100911993; Usp48rno-miR-30a-5p252279gaagGUCAG-CUC-----CUACAAAUGU ||| | ||| |||||||||tgagCAGGCAGAGTAAATCATGTTTACA
LOC100911993; Usp48rno-miR-30b258279uCGACUCACAUCCUACAAAUGU || |||| | |||||||||gGCAGAGTAAATCATGTTTACA
LOC100911993; Usp48rno-miR-30c255279CGAC--UCUCACAUCCUACAAAUGU|| | ||||| | |||||||||GCAGGCAGAGTAAATCATGTTTACA
LOC100911993; Usp48rno-miR-322255276acaaCGUCGCG--AAGUACAAA |||| |: ||||||||gcagGCAGAGTAAATCATGTTT
LOC100911993; Usp48rno-miR-33519161938uguaaaaagcaauAACGAGAACu | |||||||ctacagcacaggcTAGCTCTTGg
LOC100911993; Usp48rno-miR-33920052025acucgaggaccucCUGUCCCu |||||||tttgtctttcccaGACAGGGt
LOC100911993; Usp48rno-miR-343269290AG-ACCCGUGUG-CCUCCCUCu|| || :|||| ||||||||TCATGTTTACACAGGAGGGAGt
LOC100911993; Usp48rno-miR-343221237AGACCCGUGUGCCUCCCUCU|: |||:: |||||||||TTAGGGTG---GGAGGGAGA
LOC100911993; Usp48rno-miR-34616331658ucUCCG--UCCGU-GAGUCCGUCUGu |||| | ||| | :|||||||tcAGGCAAATGCAGGTGGGGCAGACc
LOC100911993; Usp48rno-miR-365787808uauuccuaaaaaUCCCCGUAAu |||||||||gatacatcctacAGGGGCATTt
LOC100911993; Usp48rno-miR-37714161437GGUUUUCAACGGAAACACACUa||::|: ||| |||||||CCGGAGCTTGAGGCTGTGTGAc
LOC100911993; Usp48rno-miR-10b795802----------------------------UGUGUUUAAGCCAAGAUGUCCC |:||| || ||||||||UCACUUCUUUCUGAAAACCAUUCUUCUGAUACA---UC----CUACAGGGG
LOC100911993; Usp48rno-miR-128a15571564UUUU-CUCUGGCCAA--------------------GUGACACU |:||::| ||||||||UUCUUGGGAUUGUAAGUGCACAAGCCAGAAGUUAGCACUGUGAG
LOC100911993; Usp48rno-miR-128b15571564CUUU-CUCUGGCCAA--------------------GUGACACU |:||::| ||||||||UUCUUGGGAUUGUAAGUGCACAAGCCAGAAGUUAGCACUGUGAG
LOC100911993; Usp48rno-miR-130a173180U-----------ACGGGAAAAU----------UGUAACGUGAC ||||:| | |||||||||GACUGUCCCAAUUGCCUUAUGUCAAAUAAAGCAGAUUGCACUGG
LOC100911993; Usp48rno-miR-130b173180U-----------ACGGGAAAGUAG-----------UAACGUGAC ||||:| :|| |||||||||GACUGUCCCAAUUGCCUUAU-GUCAAAUAAAGCAGAUUGCACUGG
LOC100911993; Usp48rno-miR-133a13111318UG-------------------UCGACCAA-CUUC-CCCUGGUU ||| || ||||||||UUUCAGGUCUGUUCUUUACUGAGCACCACAGAUAUGGGACCAAG
LOC100911993; Usp48rno-miR-133b13111318A--------------------UCGACCAA-CUUC-CCCUGGUU ||| || ||||||||UUUCAGGUCUGUUCUUUACUGAGCACCACAGAUAUGGGACCAAG
LOC100911993; Usp48rno-miR-140*19051912AC-------AGGCACC------------AAGAUGGGACACCAU |||||| ||||: |||||||:GCUUUCUAAUCCGUGCUGUUUGGUUGUCUUCUGAACUGUGGUGG
LOC100911993; Usp48rno-miR-152174181-----GGGUUCAAG----ACAGU------------ACGUGACU ||||| ||||| |||||||:ACUGUCCCAAUUGCCUUAUGUCAAAUAAAGCAGAUUGCACUGGU
LOC100911993; Usp48rno-miR-185845852-------------------------CUUG-ACGGAAAGAGAGGU |::| |||: ||||||||GAAAGGAGGAACAAAAGACUAUACAGGGCGUGCUG-UCUCUCCAG
LOC100911993; Usp48rno-miR-20b*17161723----------------GUCUUCA-CGAGU-----GUGACGUCA ||| ||| || || ||||||||GCCGCUUCCGCCUCGACAGCAGUCGCCCAUCGCCCACUGCAGA
LOC100911993; Usp48rno-miR-21615621569GU------------------GUCAACGGUCG----ACUCUAAU ||| |::||| |||||||:GGGAUUGUAAGUGCACAAGCCAGAAGUUAGCACUGUGAGAUUGU
LOC100911993; Usp48rno-miR-224378385AUU--UGCCU-----------------UGGU-GAUCACUGAAC |:||: ||: | |||||||||AGUACAUGGGCUAGCAUCCUGCUCCAAACUCUCAAGUGACUUGU
LOC100911993; Usp48rno-miR-27a15581565----------------------CGC-CUUGAAUCGGUGACACUU || ||| |||| ||||||||:UCUUGGGAUUGUAAGUGCACAAGCCAGAAGUUAG-CACUGUGAGA
LOC100911993; Usp48rno-miR-27b15581565C-----------------------GUCUUGAAUCGGUGACACUU ||||| |||| ||||||||:UCUUGGGAUUGUAAGUGCACAAGCCAGAAGUUAG-CACUGUGAGA
LOC100911993; Usp48rno-miR-2812341241-----------------GAGUUA-UC-UGACA--CUCGAGGAA || :| || ||| ||||||||GAGAGCUGCACACCGUCCUGGAGGAGUACUCACGGAGCUCCUG
LOC100911993; Usp48rno-miR-29814531460CCUUCUUG-UCGGGA--------------------GGAGACGG|||: :||: | |||||||GGAGCUUGAGGCUGUGUGACAAAGCGUUGGUAGGACCUCUGCA
LOC100911993; Usp48rno-miR-301173180------------------UACGAAACUGUUAUGA-UAACGUGAC |||: |:|| :| |||||||||GACUGUCCCAAUUGCCUUAUGUCAA-AUAAAGCAGAUUGCACUGG
LOC100911993; Usp48rno-miR-30a-5p272279GAA-GGUCAGCUCC---------------------UACAAAUGU | || |||| |||||||||AGGGCGAGA-GAGGACUGAGCAGGCAGAGUAAAUCAUGUUUACAC
LOC100911993; Usp48rno-miR-30b272279---------------------UCGACUCACAUCCUACAAAUGU :|| |||| |||||||||AGGGCGAGAGAGGACUGAGCAGGCAGAGUAAAUCAUGUUUACAC
LOC100911993; Usp48rno-miR-30c272279---CGA-CUCUCA-----CAUCC-----------UACAAAUGU || ||||| | ||| |||||||||AGGGCGAGAGAGGACUGAGCAGGCAGAGUAAAUCAUGUUUACAC
LOC100911993; Usp48rno-miR-322269276ACAA---------------------CGUCGCGA--AGUACAAA |||| |: ||||||||GAGAGGGCGAGAGAGGACUGAGCAGGCAGAGUAAAUCAUGUUUA
LOC100911993; Usp48rno-miR-33519311938----------------------UGUAAAAAGCAAUAACGAGAACU ||| | |||||||:UCUUCUGAACUGUGGUGGCUCUACAGCACA-GGCUA-GCUCUUGGU
LOC100911993; Usp48rno-miR-33920182025AC---UCGAGGACCUC-------------------CUGUCCCU :|||:|| |||||||CUCCAGGCUUCUUUAUGUUUCUUUUGUCUUUCCCAGACAGGGU
LOC100911993; Usp48rno-miR-343230237AGA--------------------------CCCGUGUGCCUCCCUCU |||:: |||||||||UGAAGGAAAUGUUUCAGGUUUUCUAUUUAGGGUG---GGAGGGAGAG
LOC100911993; Usp48rno-miR-343283290---------------------AG-ACCCGUGUG-CCUCCCUCU || || :|||| ||||||||GGACUGAGCAGGCAGAGUAAAUCAUGUUUACACAGGAGGGAGU
LOC100911993; Usp48rno-miR-34616511658UC-----------------UCCGUC--CGUG-AGUCCGUCUGU ||||| ||| | :|||||||AUAGCCAUUGACUCUUGUCAGGCAAAUGCAGGUGGGGCAGACC
LOC100911993; Usp48rno-miR-365801808UAUUCCUAAAAA---------------------UCCCCGUAAU |||||||||CUUUCUGAAAACCAUUCUUCUGAUACAUCCUACAGGGGCAUUU
LOC100911993; Usp48rno-miR-37714301437---------------------GGUUUUCAACGGAAACACACUA ||::|: ||| |||||||UUAUUGUCCUUACAAAGAAACCCGGAGCUUGAGGCUGUGUGAC
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
Usp48RAID00112534rno-miR-203a-3pmiRNAMIMAT0000876Usp48mRNA362636Prediction0.1828
Usp48RAID00210396rno-miR-96-5pmiRNAMIMAT0000818Usp48mRNA362636Prediction0.1828
Usp48RAID00269025rno-miR-212-5pmiRNAMIMAT0017158Usp48mRNA362636Prediction0.1828
Usp48RAID00578303rno-miR-148b-3pmiRNAMIMAT0000579Usp48mRNA362636Prediction0.2202
Usp48RAID00607353rno-miR-23a-3pmiRNAMIMAT0000792Usp48mRNA362636Prediction0.1828
Usp48RAID00622672rno-miR-3541miRNAMIMAT0017795Usp48mRNA362636Prediction0.1828
Usp48RAID00658399rno-miR-133b-5pmiRNAMIMAT0017205Usp48mRNA362636Prediction0.1828
Usp48RAID00684962rno-miR-301b-3pmiRNAMIMAT0005304Usp48mRNA362636Prediction0.2202
Usp48RAID00715300rno-miR-22-3pmiRNAMIMAT0000791Usp48mRNA362636Prediction0.1828
LOC100911993RAID00846161rno-miR-365-3pmiRNAMIMAT0001549LOC100911993mRNA100911993Prediction0.1828
Usp48RAID00855064rno-miR-154-5pmiRNAMIMAT0000856Usp48mRNA362636Prediction0.2202
Usp48RAID00881128rno-miR-130b-3pmiRNAMIMAT0000837Usp48mRNA362636Prediction0.2202
Usp48RAID00913089rno-miR-365-3pmiRNAMIMAT0001549Usp48mRNA362636Prediction0.2202
Usp48RAID00953811rno-miR-129-5pmiRNAMIMAT0000600Usp48mRNA362636Prediction0.1828
Usp48RAID01015141rno-miR-20a-5pmiRNAMIMAT0000602Usp48mRNA362636Prediction0.1828
LOC100911993RAID01027074rno-miR-222-5pmiRNAMIMAT0017164LOC100911993mRNA100911993Prediction0.1828
Usp48RAID01060731rno-miR-3559-5pmiRNAMIMAT0017827Usp48mRNA362636Prediction0.1828
Usp48RAID01236689rno-miR-186-5pmiRNAMIMAT0000863Usp48mRNA362636Prediction0.1828
Usp48RAID01309999rno-miR-494-3pmiRNAMIMAT0003193Usp48mRNA362636Prediction0.2202
Usp48RAID01374077rno-miR-384-5pmiRNAMIMAT0005309Usp48mRNA362636Prediction0.2202
Usp48RAID01393690rno-miR-483-3pmiRNAMIMAT0003121Usp48mRNA362636Prediction0.1828
Usp48RAID01535886rno-miR-19b-3pmiRNAMIMAT0000788Usp48mRNA362636Prediction0.1828
Usp48RAID01550945rno-miR-139-5pmiRNAMIMAT0000845Usp48mRNA362636Prediction0.1828
Usp48RAID01580704rno-miR-206-5pmiRNAMIMAT0017154Usp48mRNA362636Prediction0.1828
Usp48RAID01681559rno-miR-17-5pmiRNAMIMAT0000786Usp48mRNA362636Prediction0.1828
LOC100911993RAID01716508rno-miR-743b-3pmiRNAMIMAT0005280LOC100911993mRNA100911993Prediction0.1828
Usp48RAID01834631rno-miR-361-5pmiRNAMIMAT0003117Usp48mRNA362636Prediction0.1828
Usp48RAID02025325rno-miR-219bmiRNAMIMAT0017882Usp48mRNA362636Prediction0.1828
Usp48RAID02247536rno-miR-296-3pmiRNAMIMAT0004742Usp48mRNA362636Prediction0.1828
LOC100911993RAID02414958rno-miR-212-5pmiRNAMIMAT0017158LOC100911993mRNA100911993Prediction0.1828
Usp48RAID02418072rno-miR-30d-5pmiRNAMIMAT0000807Usp48mRNA362636Prediction0.2202
Usp48RAID02468387rno-miR-328a-3pmiRNAMIMAT0000564Usp48mRNA362636Prediction0.1828
Usp48RAID02568301rno-miR-30e-5pmiRNAMIMAT0000805Usp48mRNA362636Prediction0.2202
Usp48RAID02611752rno-miR-130a-3pmiRNAMIMAT0000836Usp48mRNA362636Prediction0.2202
Usp48RAID02639137rno-miR-743b-3pmiRNAMIMAT0005280Usp48mRNA362636Prediction0.1828
Usp48RAID02939530rno-miR-23b-3pmiRNAMIMAT0000793Usp48mRNA362636Prediction0.1828
Usp48RAID02971891rno-miR-325-3pmiRNAMIMAT0004639Usp48mRNA362636Prediction0.1828
Usp48RAID02986053rno-miR-185-5pmiRNAMIMAT0000862Usp48mRNA362636Prediction0.1828
Usp48RAID02995379rno-miR-7a-5pmiRNAMIMAT0000606Usp48mRNA362636Prediction0.1828
Usp48RAID03104359rno-miR-222-5pmiRNAMIMAT0017164Usp48mRNA362636Prediction0.1828
Usp48RAID03114865rno-miR-3589miRNAMIMAT0017888Usp48mRNA362636Prediction0.1828
Usp48RAID03236146rno-miR-224-5pmiRNAMIMAT0003119Usp48mRNA362636Prediction0.1828
Usp48RAID03281111rno-miR-148a-3pmiRNAMIMAT0035725Usp48mRNA362636Prediction0.1828
Usp48RAID03396237rno-miR-19a-3pmiRNAMIMAT0000789Usp48mRNA362636Prediction0.1828
LOC100911993RAID03514691rno-miR-206-5pmiRNAMIMAT0017154LOC100911993mRNA100911993Prediction0.1828
Usp48RAID03612094rno-miR-301a-3pmiRNAMIMAT0000552Usp48mRNA362636Prediction0.2202
Usp48RAID03661773rno-miR-124-3pmiRNAMIMAT0000828Usp48mRNA362636Prediction0.1828
Usp48RAID03760451rno-miR-30a-5pmiRNAMIMAT0000808Usp48mRNA362636Prediction0.2202
Usp48RAID03890517rno-miR-128-3pmiRNAMIMAT0000834Usp48mRNA362636Prediction0.1828
Usp48RAID03891861rno-miR-152-3pmiRNAMIMAT0000854Usp48mRNA362636Prediction0.2202
Usp48RAID03915616rno-miR-30b-5pmiRNAMIMAT0000806Usp48mRNA362636Prediction0.2202
Usp48RAID03942689rno-miR-182miRNAMIMAT0005300Usp48mRNA362636Prediction0.1828
Usp48RAID03951632rno-miR-216a-5pmiRNAMIMAT0000886Usp48mRNA362636Prediction0.1828
Usp48RAID03995375rno-miR-335miRNAMIMAT0000575Usp48mRNA362636Prediction0.1828
Usp48RAID04046594rno-miR-30c-5pmiRNAMIMAT0000804Usp48mRNA362636Prediction0.2202
LOC100911993RAID04061738rno-miR-3589miRNAMIMAT0017888LOC100911993mRNA100911993Prediction0.1828