DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000591 rno-miR-343 311187 Pacsin3 agACCCGUGUGCCU-CCCUCu || | :|| ||| ||||| guUGAGGGCA-GGAUGGGAGa 2 19 167 186 [rn4:3:75619383-75619402:+] 0.4768 120 0 -24.23 -0.4344 MIMAT0000604 rno-miR-350 311187 Pacsin3 cacuuucacauacccGAAACACUu :||||||| gcuagcagcacccucUUUUGUGAc 2 10 318 341 [rn4:3:75619534-75619557:+] 0.5283 141 7 -6.73 -0.4780 MIMAT0004721 rno-miR-30b-3p 311187 Pacsin3 cugCAUUUGUAGGU---GUAGGGUc | :|:|||::: ||||||| ccaGGGAGCAUUUGGGUCAUCCCAc 2 20 223 247 [rn4:3:75619439-75619463:+] 0.5283 150 7 -18.61 -0.2150 MIMAT0004740 rno-miR-218* 311187 Pacsin3 gcgccacgaacuGUCUUGGUAc | ||||||| gaccugaaagccCUGAACCAUa 2 11 54 75 [rn4:3:75619270-75619291:+] 0.4846 142 7 -9.13 -0.5348 MIMAT0000894 rno-miR-291a-5p 311187 Pacsin3 ucUCUCCCGGAGGUGAAACUAc || | |: |: | |||||| guAGUGUGUAUUAAAUUUGAUc 2 21 347 368 [rn4:3:75619563-75619584:+] 0.5283 128 6 -6.00 -0.1572 MIMAT0003207 rno-miR-369-3p 311187 Pacsin3 uuucuaguUGGUACAUAAUaa | ::||||||| cuucuuguAGUGUGUAUUAaa 3 14 341 361 [rn4:3:75619557-75619577:+] 0.5283 129 0 -5.28 -0.1725 MIMAT0012839 rno-miR-668 311187 Pacsin3 ccaucACCCGGCUCGGCUCACUGu |||| || : ||||||| caggaUGGG-AGAUUGGAGUGACa 2 20 175 197 [rn4:3:75619391-75619413:+] 0.4768 153 7 -24.47 -0.4982 MIMAT0012849 rno-miR-295 311187 Pacsin3 cuUCACACGGGGUGUAAACUca ||||||: ::| |||||| guAGUGUGUAUUAAAUUUGAuc 3 21 347 368 [rn4:3:75619563-75619584:+] 0.5283 152 0 -15.19 -0.1280 MIMAT0001619 rno-miR-322 311187 Pacsin3 agGUUUUGUACUUAACGACGAc ::|| ||| : ||||||| ccUGAACCAUAUGCUGCUGCUg 2 21 65 86 [rn4:3:75619281-75619302:+] 0.4846 156 7 -19.86 -0.1772 MIMAT0000566 rno-miR-329 311187 Pacsin3 uuuuuccaaucgaccCACACAa |||||| uugugacuucuuguaGUGUGUa 2 8 335 356 [rn4:3:75619551-75619572:+] 0.5283 120 6 -7.82 -0.1565 MIMAT0000589 rno-miR-342-3p 311187 Pacsin3 ugcccacgcUAAAGA-CACACUCu :|| || ||||||| uguuuaggaGUUCCUGGUGUGAGg 2 15 273 296 [rn4:3:75619489-75619512:+] 0.5283 149 7 -16.41 -0.2262 MIMAT0000784 rno-miR-15b 311187 Pacsin3 acAUUUGGUACUAC-ACGACGAu |:|||||| ||| ||||||| ccUGAACCAU-AUGCUGCUGCUg 2 21 65 86 [rn4:3:75619281-75619302:+] 0.4846 173 7 -24.21 -0.1738 MIMAT0000785 rno-miR-16 311187 Pacsin3 gcgguuaUAAAUGCACGACGAu || |:| ||||||| cugaaccAUAUGC-UGCUGCUg 2 16 66 86 [rn4:3:75619282-75619302:+] 0.4846 149 7 -18.35 -0.1646 MIMAT0000824 rno-miR-103 311187 Pacsin3 agUAUCGGGACAU-GU-UACGACGa | ||||||| | || ||||||| ugAAAGCCCUGAACCAUAUGCUGCu 2 22 58 82 [rn4:3:75619274-75619298:+] 0.4846 171 7 -27.95 -0.4233 MIMAT0000826 rno-miR-107 311187 Pacsin3 acUAUCGGGACAU-GU-UACGACGa | ||||||| | || ||||||| ugAAAGCCCUGAACCAUAUGCUGCu 2 22 58 82 [rn4:3:75619274-75619298:+] 0.4846 171 7 -29.78 -0.4233 MIMAT0000870 rno-miR-195 311187 Pacsin3 cgguuauaaAGAC-ACGACGAu | || ||||||| ccugaaccaUAUGCUGCUGCUg 2 13 65 86 [rn4:3:75619281-75619302:+] 0.4846 143 7 -16.40 -0.1772 MIMAT0000877 rno-miR-204 311187 Pacsin3 ucCGUAUCCUACUGUUUC-CCUu |: |:|| | | |||| ||| ggGUCUGGGUUUAGAAAGAGGAc 2 21 134 156 [rn4:3:75619350-75619372:+] 0.4807 124 0 -14.48 -0.5137 MIMAT0004742 rno-miR-296 311187 Pacsin3 ccUCUCGGAGGUGGGUUGGGAg | :||| :|:||||||| aaAUGGCCAGAGCUCAACCCUu 2 21 20 41 [rn4:3:75619236-75619257:+] 0.6848 156 7 -22.72 -0.3066 MIMAT0003119 rno-miR-224 311187 Pacsin3 auUUGCCUUG---GUGAUCACUGAAc |:| | || | :| ||||||| cuAGCAGCACCCUCUUUUGUGACUUc 2 22 319 344 [rn4:3:75619535-75619560:+] 0.5283 148 7 -14.12 -0.7418 MIMAT0003383 rno-miR-497 311187 Pacsin3 auGUUUGGUGUCAC-ACGACGAc ::|||||:| || ||||||| ccUGAACCAUA-UGCUGCUGCUg 2 21 65 86 [rn4:3:75619281-75619302:+] 0.4846 165 7 -25.20 -0.1755 MIMAT0005339 rno-miR-873 311187 Pacsin3 uccucUGAGUGUUCAAGGACg ::|:| :|||||||| aaacuGUUUAGGAGUUCCUGg 2 17 269 289 [rn4:3:75619485-75619505:+] 0.5283 156 7 -17.53 -0.3742

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G056087 Pacsin3 Rattus norvegicus 311187

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Pacsin3 RAID00019948 rno-miR-3571 miRNA MIMAT0017851 Pacsin3 mRNA 311187 Prediction 0.1828 Pacsin3 RAID00148472 rno-miR-107-3p miRNA MIMAT0000826 Pacsin3 mRNA 311187 Prediction 0.2202 Pacsin3 RAID00585466 rno-miR-195-5p miRNA MIMAT0000870 Pacsin3 mRNA 311187 Prediction 0.1828 Pacsin3 RAID00760097 rno-miR-873-5p miRNA MIMAT0005339 Pacsin3 mRNA 311187 Prediction 0.1828 Pacsin3 RAID00865947 rno-miR-16-5p miRNA MIMAT0000785 Pacsin3 mRNA 311187 Prediction 0.1828 Pacsin3 RAID01749323 rno-miR-103-3p miRNA MIMAT0000824 Pacsin3 mRNA 311187 Prediction 0.2202 Pacsin3 RAID02168991 rno-miR-497-5p miRNA MIMAT0003383 Pacsin3 mRNA 311187 Prediction 0.1828 Pacsin3 RAID02511760 rno-miR-224-5p miRNA MIMAT0003119 Pacsin3 mRNA 311187 Prediction 0.2202 Pacsin3 RAID02564170 rno-miR-350 miRNA MIMAT0000604 Pacsin3 mRNA 311187 Prediction 0.1828 Pacsin3 RAID02670994 rno-miR-342-3p miRNA MIMAT0000589 Pacsin3 mRNA 311187 Prediction 0.1828 Pacsin3 RAID02866920 rno-miR-296-3p miRNA MIMAT0004742 Pacsin3 mRNA 311187 Prediction 0.1828 Pacsin3 RAID03389158 rno-miR-322-5p miRNA MIMAT0001619 Pacsin3 mRNA 311187 Prediction 0.1828 Pacsin3 RAID03484697 rno-miR-15b-5p miRNA MIMAT0000784 Pacsin3 mRNA 311187 Prediction 0.1828 Pacsin3 RAID03599146 rno-miR-1956-5p miRNA MIMAT0035735 Pacsin3 mRNA 311187 Prediction 0.1828 Pacsin3 RAID03684065 rno-miR-204-5p miRNA MIMAT0000877 Pacsin3 mRNA 311187 Prediction 0.1828 Pacsin3 RAID03912641 rno-miR-329-3p miRNA MIMAT0000566 Pacsin3 mRNA 311187 Prediction 0.1828