DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000561 rno-miR-327 315134 Josd1 uggGAGU-ACGGGGAGUUCc |||: | | ||||||| uggCUCGCUCCACCUCAAGu 2 17 981 1000 [rn4:7:117917508-117917527:-] 0.5444 151 7 -20.35 -0.4260 MIMAT0000577 rno-miR-337 315134 Josd1 uuucCGUAGUAUAU-CCUCGACUu |: | | | | |||||||| ugcuGUUUGAAAGAGGGAGCUGAa 2 20 221 244 [rn4:7:117918264-117918287:-] 0.5461 150 7 -16.81 -0.2161 MIMAT0000591 rno-miR-343 315134 Josd1 agacccgugugcCUCCCUCu ||||||| ugcuguuugaaaGAGGGAGc 2 9 221 240 [rn4:7:117918268-117918287:-] 0.5461 140 7 -16.37 -0.4177 MIMAT0000599 rno-miR-349 315134 Josd1 ucuccaAUUC-UGUCGUCCCGAc |||| |: ||||||| gaugccUAAGCAUUUCAGGGCUg 2 17 1642 1664 [rn4:7:117916844-117916866:-] 0.6626 151 7 -20.49 -0.7693 MIMAT0000607 rno-miR-7a* 315134 Josd1 uaccgucugacacuAAACAACa ||||||| cuuuauucccuuucUUUGUUGg 2 9 1801 1822 [rn4:7:117916686-117916707:-] 0.6626 140 7 -5.25 -0.3423 MIMAT0004711 rno-miR-21* 315134 Josd1 cugucggGUAGCUGACGACAAc || | :||||||| cauugaaCACCCUUUGCUGUUu 2 16 207 228 [rn4:7:117918280-117918301:-] 0.5461 147 7 -16.55 -0.3342 MIMAT0003153 rno-miR-24-1* 315134 Josd1 gaCUAUAGUCGAGUCAUCCGUg |:| | || ::||||||| agGGUUUGAGACUGGUAGGCAc 2 21 856 877 [rn4:7:117917631-117917652:-] 0.5444 156 7 -20.64 -0.1142 MIMAT0003153 rno-miR-24-1* 315134 Josd1 gaCUAUAGUCGAGUCAU-CCGUg |:|| | | ||||| |||| ugGGUAAAACCACAGUAGGGCAg 2 21 632 654 [rn4:7:117917854-117917876:-] 0.5444 128 0 -17.85 -0.1638 MIMAT0005441 rno-miR-24-2* 315134 Josd1 ugaCAAAGUCGAGUCAUCCGUg |||| || ::||||||| aggGUUUGAGACUGGUAGGCAc 2 20 856 877 [rn4:7:117917631-117917652:-] 0.5444 163 7 -22.99 -0.1131 MIMAT0004718 rno-miR-29a* 315134 Josd1 gacuUGUGGUUUUCUUUAGUCa |: ::|: | ||||||| acccAUUUUAGCA-AAAUCAGa 2 19 758 778 [rn4:7:117917730-117917750:-] 0.5444 144 7 -10.53 -0.9349 MIMAT0004728 rno-miR-124* 315134 Josd1 uagUUCCA--GGCGACACUUGUGc ||||| |:| ||||||| aagAAGGUAGGAGUUCUGAACACu 2 20 173 196 [rn4:7:117918312-117918335:-] 0.5461 154 7 -17.17 -0.2932 MIMAT0004728 rno-miR-124* 315134 Josd1 uaGUUCCAGGC-GACACUUGUGc :|:|| | | ||||||| cuUAGGGCAAGACAUUGAACACc 2 21 195 217 [rn4:7:117918291-117918313:-] 0.5461 143 7 -13.29 -0.1957 MIMAT0004732 rno-miR-135a* 315134 Josd1 aaaguaccgAAGGUAGGGAUGu || ::||||||| ucacucuaaUUAUGUCCCUACc 2 14 669 690 [rn4:7:117917818-117917839:-] 0.5444 149 7 -12.86 -0.2658 MIMAT0004732 rno-miR-135a* 315134 Josd1 aaaguaccgaAGGUAGGGAUGu ||| ||||||| aagaggagacUCC-UCCCUACa 2 13 1543 1563 [rn4:7:117916945-117916965:-] 0.6626 146 7 -20.82 -0.3575 MIMAT0000894 rno-miR-291a-5p 315134 Josd1 ucucucccggaGGUGAAACUAc || ||||||| aacccuccagaCCUCUUUGAUg 2 12 31 52 [rn4:7:117918456-117918477:-] 0.5461 147 7 -20.29 -0.1028 MIMAT0004743 rno-miR-300-5p 315134 Josd1 uguuuccUAUUGGAGAGAAGUu ||::: ||||||| gcagucaAUGGUGGCUCUUCAc 2 16 651 672 [rn4:7:117917836-117917857:-] 0.5444 147 7 -14.27 -0.1261 MIMAT0003162 rno-miR-1* 315134 Josd1 ccCAUGUAUUUCU-UC-AUACACg ||:|| |:|| || |||||| caGUGCAAUAGGACAGAUAUGUGg 2 21 114 137 [rn4:7:117918371-117918394:-] 0.5461 131 6 -16.02 -0.1076 MIMAT0003195 rno-miR-376b-5p 315134 Josd1 auugguaucuuccuUAUAGGUg ||||||| ggcugguucuguucAUAUCCAa 2 9 1660 1681 [rn4:7:117916827-117916848:-] 0.6626 140 7 -8.74 -0.5781 MIMAT0005281 rno-miR-871 315134 Josd1 acACUG-GCCGUG-GUUAGAC-UUAu ||:| | |||: | ||||| ||| aaUGGCACUGCAUGCCAUCUGCAAUc 2 22 470 495 [rn4:7:117918013-117918038:-] 0.5479 127 0 -14.03 -0.2481 MIMAT0005289 rno-miR-881 315134 Josd1 agaUA-AGUCUUUACGGUGUCAa || | :| || ||||||| acaAUGUGGGUAAAACCACAGUa 2 20 626 648 [rn4:7:117917860-117917882:-] 0.5444 150 7 -12.87 -0.4855 MIMAT0005289 rno-miR-881 315134 Josd1 agaUAAGUC-UUUACGGUGUCAa | | :| |||| |||||| caaAGUAGGUAAAUUGCACAGUa 2 20 569 591 [rn4:7:117917917-117917939:-] 0.5444 126 6 -11.00 -0.1133 MIMAT0005321 rno-miR-500 315134 Josd1 acuugGGAACGGGUC-CACGUAa |: || |::| |||||| ccccaCUGUGACUGGAGUGCAUg 2 18 1241 1263 [rn4:7:117917245-117917267:-] 0.6589 121 6 -17.09 -0.4692 MIMAT0005327 rno-miR-672 315134 Josd1 agUGUGUGUCAUGUGGUU-GGAGu || | | |:| :||| |||| ugACCCUCUUUGCCUCAACCCUCc 2 22 15 38 [rn4:7:117918470-117918493:-] 0.5461 121 0 -11.94 -0.1961 MIMAT0005337 rno-miR-760-3p 315134 Josd1 agGGGUGU-CUGGGUCUCGGc |:|| | ||||||||||| ggCUCAAAGGACCCAGAGCCa 2 19 413 433 [rn4:7:117918075-117918095:-] 0.5461 169 7 -30.10 -0.1266 MIMAT0005337 rno-miR-760-3p 315134 Josd1 agggGUGUCUG--GGUCUCGGc ::::||| :||||||| gauaUGUGGACUGUCAGAGCCa 2 17 129 150 [rn4:7:117918358-117918379:-] 0.5461 147 7 -19.22 -0.2481 MIMAT0012825 rno-miR-105 315134 Josd1 uggUGUCUGUAGACUCGUGAAc :|||: || ||||||| ugaGCAGGGAU---AGCACUUa 2 20 733 751 [rn4:7:117917757-117917775:-] 0.5444 147 7 -14.55 -0.6538 MIMAT0012825 rno-miR-105 315134 Josd1 uggugucUGUAGACUCGUGAAc ||| | ||||||| cauguuuACACC--AGCACUUu 2 16 1260 1279 [rn4:7:117917229-117917248:-] 0.6589 144 7 -10.84 -0.3188 MIMAT0012826 rno-miR-220 315134 Josd1 uccagagACUGUGACACCACc || :||||||| auaccaaUGUGUUUGUGGUGg 2 15 1065 1085 [rn4:7:117917423-117917443:-] 0.6589 142 7 -18.44 -0.1814 MIMAT0012826 rno-miR-220 315134 Josd1 ucCA-GAGACUGUGACA-CCACc || | :||:|||||| |||| ugGUCCAUUGGCACUGUCGGUGa 2 20 1501 1523 [rn4:7:117916985-117917007:-] 0.6626 134 0 -27.76 -0.4774 MIMAT0012840 rno-miR-802 315134 Josd1 uuccuacuuagaaACAAUGACu |||||||| guucugcugguagUGUUACUGa 2 10 303 324 [rn4:7:117918184-117918205:-] 0.5461 145 7 -13.56 -0.4084 MIMAT0012847 rno-miR-293 315134 Josd1 guUUCA--CAGUGUGUCAAACUCa |:|| | : || :||||||| gaAGGUAAGCUUCAGGGUUUGAGa 2 21 843 866 [rn4:7:117917642-117917665:-] 0.5444 151 7 -16.21 -0.1117 MIMAT0012851 rno-miR-547 315134 Josd1 gagugaaUUUCUUCAUGGUu ||| |||||||| ugaggagAAAUAAGUACCAu 2 14 1039 1058 [rn4:7:117917450-117917469:-] 0.6191 157 7 -11.48 -0.6648 MIMAT0000579 rno-miR-148b-3p 315134 Josd1 uguUUCAAGACACUA-CGUGACu :||| | | || |||||| cacGAGUCCAGCAAUGGCACUGc 2 20 458 480 [rn4:7:117918028-117918050:-] 0.5479 123 6 -12.25 -0.4072 MIMAT0000596 rno-miR-346 315134 Josd1 ucuccguccGUGAGU-CCG-UCUGu ||||:| ||| |||| aguucugaaCACUUAGGGCAAGACa 2 15 184 208 [rn4:7:117918300-117918324:-] 0.5461 121 0 -20.59 -0.4784 MIMAT0000602 rno-miR-20a 315134 Josd1 gaUGGACGUGAUAUUCGUGAAAu |: | :|| | |||||||| gcAUGUUUAC-ACCAGCACUUUu 2 22 1259 1280 [rn4:7:117917228-117917249:-] 0.6589 151 7 -14.38 -0.5393 MIMAT0000611 rno-miR-135b 315134 Josd1 aguGUAUCCUUACUU-UUCGGUAu ::| || : ||: ||||||| cacUGUCGGUGAGAGUAAGCCAUu 2 21 1512 1535 [rn4:7:117916973-117916996:-] 0.6626 151 7 -15.91 -0.3954 MIMAT0000781 rno-miR-9 315134 Josd1 agUAUGUCGAUC-UAUUGGUUUcu ||::| :| | |||||||| agAUGUAUUUUGUUUAACCAAAua 3 22 1846 1869 [rn4:7:117916639-117916662:-] 0.6626 140 0 -9.46 -0.2887 MIMAT0000782 rno-miR-10a-5p 315134 Josd1 guguuuaagccuagaUGUCCCAu ||||||| uaguuucuuuuacaaACAGGGUu 2 9 959 981 [rn4:7:117917527-117917549:-] 0.5444 140 7 -12.70 -0.3657 MIMAT0000786 rno-miR-17-5p 315134 Josd1 gauggACGUG-ACAU----UCGUGAAAc ||||: | || |||||||| uggagUGCAUGUUUACACCAGCACUUUu 2 19 1253 1280 [rn4:7:117917228-117917255:-] 0.6589 148 7 -13.48 -0.5428 MIMAT0000795 rno-miR-25 315134 Josd1 agUCUGGCUCUGUUCACGUUAc |||:: |:| |||||||| ucAGAUU--GGCCAGUGCAAUa 2 21 104 123 [rn4:7:117918385-117918404:-] 0.5461 157 7 -20.71 -0.3720 MIMAT0000801 rno-miR-29b 315134 Josd1 uuGUGACUAAAGUUU---ACCACGAu :::| || || || ||||||| ucUGUUCAUAUCCAAUUCUGGUGCUu 2 22 1667 1692 [rn4:7:117916816-117916841:-] 0.6626 152 7 -13.68 -0.3103 MIMAT0000802 rno-miR-29a 315134 Josd1 auUGGCUAAAGUCUACCACGAu |:| | ||| ||||||| auAUCCAAUUC---UGGUGCUu 2 21 1674 1692 [rn4:7:117916816-117916834:-] 0.6626 148 7 -12.58 -0.2905 MIMAT0000803 rno-miR-29c 315134 Josd1 auUGGCUAAAGUUUACCACGAu |:| | ||| ||||||| auAUCCAAUUC---UGGUGCUu 2 21 1674 1692 [rn4:7:117916816-117916834:-] 0.6626 148 7 -12.58 -0.2905 MIMAT0000804 rno-miR-30c 315134 Josd1 cgACUCUCACAUC-C-UACAAAUGu || || || || | |||||||| acUGUGACUGGAGUGCAUGUUUACa 2 22 1245 1269 [rn4:7:117917239-117917263:-] 0.6589 163 7 -22.19 -0.4271 MIMAT0000804 rno-miR-30c 315134 Josd1 cgacucuCAC-AUCC-UACAAAUGu ||| |:|| ||||||| uggccuuGUGCUGGGUUUGUUUACa 2 17 1820 1844 [rn4:7:117916664-117916688:-] 0.6626 150 7 -18.00 -1.0048 MIMAT0000805 rno-miR-30e 315134 Josd1 gaaggucaguuCCUACAAAUGu | |||||||| gugacuggaguGCAUGUUUACa 2 12 1248 1269 [rn4:7:117917239-117917260:-] 0.6589 147 7 -13.43 -0.4335 MIMAT0000805 rno-miR-30e 315134 Josd1 gaaGGUCA-GUUCC-UACAAAUGu |: || | :|| ||||||| ggcCUUGUGCUGGGUUUGUUUACa 2 20 1821 1844 [rn4:7:117916664-117916687:-] 0.6626 145 7 -15.94 -1.0105 MIMAT0000805 rno-miR-30e 315134 Josd1 gaaggucaguuccuACAAAUgu |||||| acaaagauguauuuUGUUUAac 3 9 1842 1863 [rn4:7:117916645-117916666:-] 0.6626 120 0 -6.08 -0.1030 MIMAT0000806 rno-miR-30b-5p 315134 Josd1 ucgACUCACAUC-C-UACAAAUGu ||| || || | |||||||| cugUGACUGGAGUGCAUGUUUACa 2 20 1246 1269 [rn4:7:117917239-117917262:-] 0.6589 161 7 -18.67 -0.4271 MIMAT0000806 rno-miR-30b-5p 315134 Josd1 ucgacuCAC-AUCC-UACAAAUGu ||| |:|| ||||||| ggccuuGUGCUGGGUUUGUUUACa 2 17 1821 1844 [rn4:7:117916664-117916687:-] 0.6626 150 7 -19.24 -1.0048 MIMAT0000807 rno-miR-30d 315134 Josd1 gaagguCAGCCCCUACAAAUGu | :||| ||||||| ccuuguGCUGGGUUUGUUUACa 2 17 1823 1844 [rn4:7:117916664-117916685:-] 0.6626 152 7 -19.44 -1.0077 MIMAT0000807 rno-miR-30d 315134 Josd1 gaagGUCAGCCCCUACAAAUGu | | | | |||||||| gugaCUGGAGUGCAUGUUUACa 2 19 1248 1269 [rn4:7:117917239-117917260:-] 0.6589 150 7 -14.25 -0.4303 MIMAT0000807 rno-miR-30d 315134 Josd1 gaaggucagccccuACAAAUgu |||||| acaaagauguauuuUGUUUAac 3 9 1842 1863 [rn4:7:117916645-117916666:-] 0.6626 120 0 -5.60 -0.1019 MIMAT0000808 rno-miR-30a 315134 Josd1 gaaggUCAGCUC-C-UACAAAUGu | | ||| | |||||||| cugugACUGGAGUGCAUGUUUACa 2 18 1246 1269 [rn4:7:117917239-117917262:-] 0.6589 151 7 -14.31 -0.4271 MIMAT0000808 rno-miR-30a 315134 Josd1 gaagguCAGCUCCUACAAAUGu | :|:| ||||||| ccuuguGCUGGGUUUGUUUACa 2 17 1823 1844 [rn4:7:117916664-117916685:-] 0.6626 148 7 -16.37 -1.0105 MIMAT0000808 rno-miR-30a 315134 Josd1 gaaggucagcuccuACAAAUgu |||||| acaaagauguauuuUGUUUAac 3 9 1842 1863 [rn4:7:117916645-117916666:-] 0.6626 120 0 -6.32 -0.1019 MIMAT0000810 rno-miR-31 315134 Josd1 gucGAUACGGUCGUAGAA-CGGa :||||||| | |||| ||| ccaUUAUGCCA-CCUCUUAGCCc 2 20 495 516 [rn4:7:117917992-117918013:-] 0.5479 133 0 -19.83 -0.6062 MIMAT0000810 rno-miR-31 315134 Josd1 guCGAUACGG--UCGUAG-AACGGa |:| |||| | | || ||||| caGUUCUGCCUGACCCUCUUUGCCu 2 21 5 29 [rn4:7:117918479-117918503:-] 0.6459 123 0 -21.24 -0.1596 MIMAT0000811 rno-miR-32 315134 Josd1 acGUUGAAUCAUUACACGUUAu ||: ||:| | ||||||| uuCAGAUUGGCCA-GUGCAAUa 2 21 103 123 [rn4:7:117918385-117918405:-] 0.5461 154 7 -14.36 -0.3468 MIMAT0000816 rno-miR-92a 315134 Josd1 guccggccCUGUUCACGUUAu |:| |||||||| uucagauuGGCCAGUGCAAUa 2 14 103 123 [rn4:7:117918385-117918405:-] 0.5461 153 7 -21.67 -0.3749 MIMAT0000817 rno-miR-93 315134 Josd1 gaUGGACGUGCUUGUCGUGAAAc |: | :|| | ||||||||| gcAUGUUUAC-ACCAGCACUUUu 2 22 1259 1280 [rn4:7:117917228-117917249:-] 0.6589 159 7 -16.60 -0.5393 MIMAT0000825 rno-miR-106b 315134 Josd1 uaGACGUGACAGUCGUGAAAu :| ||| ||||||||| guUUACAC---CAGCACUUUu 2 20 1263 1280 [rn4:7:117917228-117917245:-] 0.6589 151 7 -15.54 -0.5428 MIMAT0000834 rno-miR-128 315134 Josd1 uuUCUCUGGCCAA---GUGACACu ||:|:|:| | ||||||| gcAGGGGCUGUCUCCCCACUGUGa 2 20 1228 1251 [rn4:7:117917257-117917280:-] 0.6589 150 7 -23.23 -0.2178 MIMAT0000841 rno-miR-135a 315134 Josd1 aguGUAUCC-UUAUUUUUCGGUAu ::| || :| |: ||||||| cacUGUCGGUGAGAGUAAGCCAUu 2 21 1512 1535 [rn4:7:117916973-117916996:-] 0.6626 151 7 -14.57 -0.3954 MIMAT0000844 rno-miR-138 315134 Josd1 gcCGGACUAAGUGUUGUGGUCGa || || || |||||||| guGCAUGUUU----ACACCAGCa 2 22 1257 1275 [rn4:7:117917233-117917251:-] 0.6589 148 7 -14.91 -0.8914 MIMAT0000845 rno-miR-139-5p 315134 Josd1 gaccUCUGUGCACGUGACA-UCu |||:|:||| ||||| || ggacAGAUAUGUGGACUGUCAGa 2 19 124 146 [rn4:7:117918362-117918384:-] 0.5461 138 0 -25.09 -0.1154 MIMAT0000848 rno-miR-142-3p 315134 Josd1 agGUAUUUCAUCCUU-UGU-GAUGu || ||| || || ||| |||| agCA-AAAUCAGAAACACAUCUACc 2 22 767 790 [rn4:7:117917718-117917741:-] 0.5444 122 0 -7.87 -0.5068 MIMAT0000854 rno-miR-152 315134 Josd1 ggUUCAAGACAGUA-CGUGACu :||| | | || |||||| acGAGUCCAGCAAUGGCACUGc 2 20 459 480 [rn4:7:117918028-117918049:-] 0.5479 123 6 -16.30 -0.4072 MIMAT0000868 rno-miR-193 315134 Josd1 ugacccugaaacAUCCGGUCAa | ||||||| uuucccuucagaUUGGCCAGUg 2 11 97 118 [rn4:7:117918390-117918411:-] 0.5461 142 7 -13.10 -0.3222 MIMAT0000873 rno-miR-200c 315134 Josd1 gguagUAAUGGGCCGUCAUAAu |||:| ||||||| gguaaAUUGC---ACAGUAUUc 2 18 576 594 [rn4:7:117917914-117917932:-] 0.5444 141 7 -9.52 -0.4349 MIMAT0000875 rno-miR-200b 315134 Josd1 caguagUAAUGGUCCGUCAUAAu |||: || ||||||| agguaaAUUG-CA--CAGUAUUc 2 18 575 594 [rn4:7:117917914-117917933:-] 0.5444 144 7 -10.69 -0.4103 MIMAT0000876 rno-miR-203 315134 Josd1 gaucacCAGGAUUUGUAAAGUg |||| | ||||||| aauuauGUCCCUACCAUUUCAc 2 17 676 697 [rn4:7:117917811-117917832:-] 0.5444 156 7 -16.07 -0.2090 MIMAT0000877 rno-miR-204 315134 Josd1 uccguaUCCU--ACUGUUUCCCUu :||| ||| ||||||| gaaagaGGGAGCUGA-AAAGGGAg 2 17 229 251 [rn4:7:117918257-117918279:-] 0.5461 149 7 -17.33 -0.2546 MIMAT0000878 rno-miR-205 315134 Josd1 gucugaggccACCUUACUUCCu || ||||||| gugaggaaacUGCCAUGAAGGu 2 13 827 848 [rn4:7:117917660-117917681:-] 0.5444 144 7 -13.50 -0.1465 MIMAT0000879 rno-miR-206 315134 Josd1 ggugugugaaggAAUGUAAGGu | ||||||| gccccugcacaaUGACAUUCCa 2 11 1424 1445 [rn4:7:117917063-117917084:-] 0.6607 142 7 -19.01 -0.7283 MIMAT0000882 rno-miR-211 315134 Josd1 uccgUUUCCU--ACUGUUUCCCUu :|:||| ||| ||||||| gaaaGAGGGAGCUGA-AAAGGGAg 2 19 229 251 [rn4:7:117918257-117918279:-] 0.5461 155 7 -19.42 -0.2524 MIMAT0000895 rno-miR-291a-3p 315134 Josd1 ccgUGUGUUUC--ACCU-UCGUGAAa ||| :|| ||| ||||||| aagACAAUGAGCAGGGAUAGCACUUa 2 21 726 751 [rn4:7:117917757-117917782:-] 0.5444 150 7 -15.98 -0.6789 MIMAT0000895 rno-miR-291a-3p 315134 Josd1 ccguguguuucaccuUCGUGAAa ||||||| gugcauguuuacaccAGCACUUu 2 9 1257 1279 [rn4:7:117917229-117917251:-] 0.6589 140 7 -12.18 -0.3455 MIMAT0000896 rno-miR-292-5p 315134 Josd1 guUUUC--UCGGGG-GUCAAACUCa ||:| |||::| :||||||| ugAAGGUAAGCUUCAGGGUUUGAGa 2 21 842 866 [rn4:7:117917642-117917666:-] 0.5444 154 7 -19.42 -0.1117 MIMAT0004742 rno-miR-296 315134 Josd1 ccucucggagguggGUUGGGAg ||||||| augcccagcaagggCAACCCUa 2 9 1763 1784 [rn4:7:117916724-117916745:-] 0.6626 140 7 -18.49 -0.2470 MIMAT0001538 rno-miR-429 315134 Josd1 ugCCGUAAUGGUCUGUCAUAAu ||:| |::: |||||||| uaGGUA-AAUUGCACAGUAUUc 2 21 574 594 [rn4:7:117917914-117917934:-] 0.5444 154 7 -12.88 -0.4349 MIMAT0001626 rno-miR-431 315134 Josd1 acguacugccGGACGUUCUGu |: ||||||| gcacaguauuCUAGCAAGACa 2 12 584 604 [rn4:7:117917904-117917924:-] 0.5444 143 7 -16.11 -0.8988 MIMAT0001626 rno-miR-431 315134 Josd1 acguacugccggaCGUUCUGu ||||||| cugaacacuuaggGCAAGACa 2 9 188 208 [rn4:7:117918300-117918320:-] 0.5461 140 7 -14.06 -0.3916 MIMAT0003117 rno-miR-361 315134 Josd1 cauggggaccUCUAAGACUAUu | :|||||||| uuauaacgaaAAGUUCUGAUAu 2 13 545 566 [rn4:7:117917942-117917963:-] 0.5444 148 7 -10.03 -0.5458 MIMAT0003125 rno-miR-1 315134 Josd1 uaugugugaagaAAUGUAAGGu | ||||||| gccccugcacaaUGACAUUCCa 2 11 1424 1445 [rn4:7:117917063-117917084:-] 0.6607 142 7 -16.90 -0.7283 MIMAT0003179 rno-miR-542-3p 315134 Josd1 aaagucAAUAGUUAGACAGUGu | | || ||||||| ugugucUCAGGAAACUGUCACg 2 17 440 461 [rn4:7:117918047-117918068:-] 0.5470 148 7 -16.71 -0.2152 MIMAT0003196 rno-miR-376b-3p 315134 Josd1 uucACC--UACAAG----GAGAUACUa ||| || ||| :||||||| gcuUGGUUAUUUUCUCCUUUCUAUGAg 2 19 264 290 [rn4:7:117918218-117918244:-] 0.5461 144 7 -11.28 -0.2377 MIMAT0003210 rno-miR-363 315134 Josd1 auGUCUACCUAUGGCACGUUAa ||||| |: | ||||||| uuCAGAUUGG-CCAGUGCAAUa 2 21 103 123 [rn4:7:117918385-117918405:-] 0.5461 158 7 -18.90 -0.3690 MIMAT0003211 rno-miR-20b-5p 315134 Josd1 uggACGUGAUACUCGUGAAAc | :|| | |||||||| augUUUAC-ACCAGCACUUUu 2 19 1261 1280 [rn4:7:117917228-117917247:-] 0.6589 148 7 -11.73 -0.5393 MIMAT0005309 rno-miR-384-5p 315134 Josd1 uguAACG-GAUCCUUAACAAAUGu |||: || ||: |||||||| gccUUGUGCU-GGGUUUGUUUACa 2 21 1822 1844 [rn4:7:117916664-117916686:-] 0.6626 161 7 -20.79 -1.0019 MIMAT0005309 rno-miR-384-5p 315134 Josd1 uguaACGGAUCCUUA---ACAAAUGu || || |||:| ||||||| acugUGACU-GGAGUGCAUGUUUACa 2 20 1245 1269 [rn4:7:117917239-117917263:-] 0.6589 152 7 -16.06 -0.4271 MIMAT0005309 rno-miR-384-5p 315134 Josd1 uguaacggauccuuAACAAAUgu ||||||| uacaaagauguauuUUGUUUAac 3 10 1841 1863 [rn4:7:117916645-117916667:-] 0.6626 125 0 -5.40 -0.1030 MIMAT0005310 rno-miR-384-3p 315134 Josd1 uaacacUUGUUAAAGA-UCCUUa ||| :| ||| ||||| ccaggaAACUGUGUCUCAGGAAa 2 17 431 453 [rn4:7:117918055-117918077:-] 0.5470 124 0 -10.35 -0.1648 MIMAT0005311 rno-miR-410 315134 Josd1 ugUCCGGUAGACACAA-UAUAa :|||:: :| |||| |||| caGGGCUGGUUCUGUUCAUAUc 2 20 1657 1678 [rn4:7:117916830-117916851:-] 0.6626 127 0 -12.18 -0.3642 MIMAT0005320 rno-miR-495 315134 Josd1 uucuucACGUGGUACAAACAAa ||::|:: ||||||| uggccuUGUGCUGGGUUUGUUu 2 17 1820 1841 [rn4:7:117916667-117916688:-] 0.6626 156 7 -12.55 -0.5170 MIMAT0005320 rno-miR-495 315134 Josd1 uucUUCACGU---GGUAC-AAACAAa ||| ||| |:| | |||||| agcAAGGGCAACCCUAGGCUUUGUUu 2 20 1769 1794 [rn4:7:117916714-117916739:-] 0.6626 122 6 -11.61 -0.3867 MIMAT0005335 rno-miR-758 315134 Josd1 ccAAUCACCUGGUCCAGUGUUu ||: | ||:: ||||||| ccUUGCU-GAUU--GUCACAAg 2 21 1474 1492 [rn4:7:117917016-117917034:-] 0.6626 143 7 -11.64 -0.2138 MIMAT0005340 rno-miR-92b 315134 Josd1 ccuccggccCUGCUCACGUUAu |:| |||||||| cuucagauuGGCCAGUGCAAUa 2 14 102 123 [rn4:7:117918385-117918406:-] 0.5461 153 7 -17.93 -0.3749

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G099963 Josd1 Rattus norvegicus 315134

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Josd1 rno-miR-34b 1 18 GUUAGUCGAUUAAUGUGACGGAU- ||: |||:| ||||||: CAGACAGUU-------CUGCCUGA

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Josd1 RAID00046370 rno-miR-203a-3p miRNA MIMAT0000876 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID00323427 rno-miR-760-3p miRNA MIMAT0005337 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID00441165 rno-miR-664-1-5p miRNA MIMAT0017228 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID00513181 rno-miR-148b-3p miRNA MIMAT0000579 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID00648156 rno-miR-3558-5p miRNA MIMAT0017825 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID00655011 rno-miR-207 miRNA MIMAT0003115 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID00940314 rno-miR-20a-5p miRNA MIMAT0000602 Josd1 mRNA 315134 Prediction 0.2202 Josd1 RAID00955582 rno-miR-21-3p miRNA MIMAT0004711 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID00957891 rno-miR-142-3p miRNA MIMAT0000848 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID00973502 rno-miR-431 miRNA MIMAT0001626 Josd1 mRNA 315134 Prediction 0.2202 Josd1 RAID01273872 rno-miR-384-5p miRNA MIMAT0005309 Josd1 mRNA 315134 Prediction 0.2381 Josd1 RAID01308855 rno-miR-29a-3p miRNA MIMAT0000802 Josd1 mRNA 315134 Prediction 0.2381 Josd1 RAID01344347 rno-miR-93-5p miRNA MIMAT0000817 Josd1 mRNA 315134 Prediction 0.2202 Josd1 RAID01400543 rno-miR-211-5p miRNA MIMAT0000882 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID01401814 rno-miR-20b-5p miRNA MIMAT0003211 Josd1 mRNA 315134 Prediction 0.2202 Josd1 RAID01408297 rno-miR-204-5p miRNA MIMAT0000877 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID01447745 rno-miR-135a-3p miRNA MIMAT0004732 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID01468268 rno-miR-139-5p miRNA MIMAT0000845 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID01474545 rno-miR-292-5p miRNA MIMAT0000896 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID01539791 rno-miR-206-3p miRNA MIMAT0000879 Josd1 mRNA 315134 Prediction 0.2381 Josd1 RAID01569153 rno-miR-92a-3p miRNA MIMAT0000816 Josd1 mRNA 315134 Prediction 0.2202 Josd1 RAID01587484 rno-miR-17-5p miRNA MIMAT0000786 Josd1 mRNA 315134 Prediction 0.2202 Josd1 RAID01588027 rno-miR-25-3p miRNA MIMAT0000795 Josd1 mRNA 315134 Prediction 0.2202 Josd1 RAID01679087 rno-miR-10a-5p miRNA MIMAT0000782 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID01736756 rno-miR-361-5p miRNA MIMAT0003117 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID01748252 rno-miR-9a-5p miRNA MIMAT0000781 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID01793710 rno-miR-135a-5p miRNA MIMAT0000841 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID01803459 rno-miR-291a-3p miRNA MIMAT0000895 Josd1 mRNA 315134 Prediction 0.2202 Josd1 RAID01812471 rno-miR-1-3p miRNA MIMAT0003125 Josd1 mRNA 315134 Prediction 0.2381 Josd1 RAID01850537 rno-miR-542-3p miRNA MIMAT0003179 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID01893764 rno-miR-384-3p miRNA MIMAT0005310 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID02023016 rno-miR-363-3p miRNA MIMAT0003210 Josd1 mRNA 315134 Prediction 0.2202 Josd1 RAID02042935 rno-miR-6333 miRNA MIMAT0025074 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID02069947 rno-miR-429 miRNA MIMAT0001538 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID02091458 rno-miR-346 miRNA MIMAT0000596 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID02123976 rno-miR-327 miRNA MIMAT0000561 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID02155339 rno-miR-296-3p miRNA MIMAT0004742 Josd1 mRNA 315134 Prediction 0.2202 Josd1 RAID02170923 rno-miR-92b-3p miRNA MIMAT0005340 Josd1 mRNA 315134 Prediction 0.2202 Josd1 RAID02179028 rno-miR-205 miRNA MIMAT0000878 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID02233978 rno-miR-31a-5p miRNA MIMAT0000810 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID02294100 rno-miR-361-3p miRNA MIMAT0017199 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID02296676 rno-miR-1956-3p miRNA MIMAT0035736 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID02325571 rno-miR-30d-5p miRNA MIMAT0000807 Josd1 mRNA 315134 Prediction 0.2381 Josd1 RAID02502315 rno-miR-30e-5p miRNA MIMAT0000805 Josd1 mRNA 315134 Prediction 0.2381 Josd1 RAID02605435 rno-miR-133a-5p miRNA MIMAT0017124 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID02633153 rno-miR-495 miRNA MIMAT0005320 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID02650500 rno-miR-135b-5p miRNA MIMAT0000611 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID02715465 rno-miR-758-3p miRNA MIMAT0005335 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID02758803 rno-miR-664-2-5p miRNA MIMAT0017229 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID02908780 rno-miR-106b-5p miRNA MIMAT0000825 Josd1 mRNA 315134 Prediction 0.2202 Josd1 RAID03028369 rno-miR-3085 miRNA MIMAT0017805 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID03130202 rno-miR-450b-3p miRNA MIMAT0035747 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID03199363 rno-miR-138-5p miRNA MIMAT0000844 Josd1 mRNA 315134 Prediction 0.2202 Josd1 RAID03327718 rno-miR-1b miRNA MIMAT0037263 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID03350668 rno-miR-349 miRNA MIMAT0000599 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID03404065 rno-miR-105 miRNA MIMAT0012825 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID03466034 rno-miR-376b-3p miRNA MIMAT0003196 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID03520357 rno-miR-193a-3p miRNA MIMAT0000868 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID03577563 rno-miR-29b-3p miRNA MIMAT0000801 Josd1 mRNA 315134 Prediction 0.2381 Josd1 RAID03623244 rno-miR-18a-3p miRNA MIMAT0017095 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID03628714 rno-miR-410-3p miRNA MIMAT0005311 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID03668402 rno-miR-30a-5p miRNA MIMAT0000808 Josd1 mRNA 315134 Prediction 0.2381 Josd1 RAID03688368 rno-miR-200b-3p miRNA MIMAT0000875 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID03726461 rno-miR-32-5p miRNA MIMAT0000811 Josd1 mRNA 315134 Prediction 0.2202 Josd1 RAID03733390 rno-miR-3561-5p miRNA MIMAT0017830 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID03781453 rno-miR-128-3p miRNA MIMAT0000834 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID03797705 rno-miR-152-3p miRNA MIMAT0000854 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID03826838 rno-miR-30b-5p miRNA MIMAT0000806 Josd1 mRNA 315134 Prediction 0.2381 Josd1 RAID03859313 rno-miR-200c-3p miRNA MIMAT0000873 Josd1 mRNA 315134 Prediction 0.1828 Josd1 RAID03890268 rno-miR-29c-3p miRNA MIMAT0000803 Josd1 mRNA 315134 Prediction 0.2381 Josd1 RAID03985398 rno-miR-30c-5p miRNA MIMAT0000804 Josd1 mRNA 315134 Prediction 0.2381