DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G094093 Katnb1 Rattus norvegicus 291852

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Katnb1; KATNB1; rCG_39150 rno-let-7e 183 203 UGAUAUGUUGGAGGAUGGAGU :|:||| :|| |||:|:|| CUUGUACCGCC-CCUGCUUCU Katnb1; KATNB1; rCG_39150 rno-miR-103 214 234 AGUAUCGGGACAUGUUACGACGA- ||||:|| ||||||| ---CAGCCUUGGAGC-UGCUGCUG Katnb1; KATNB1; rCG_39150 rno-miR-107 214 234 ACUAUCGGGACAUGUUACGACGA- ||||:|| ||||||| ---CAGCCUUGGAGC-UGCUGCUG Katnb1; KATNB1; rCG_39150 rno-miR-122a 14 55 UGUUUGUGGU---------------AAC---AGUGUGAGGU :|:||||| ||| ||||||||:| -GGAGCACCAGCAGCCCUCACUGGUUUGGCCUCACACUCUAG Katnb1; KATNB1; rCG_39150 rno-miR-125a 176 209 -GUGUCCAAUUU---------CCCAGAGUCCCU |:||| | |||||||| CCGCAGUCUUGUACCGCCCCUGCUUCUCAGGGC Katnb1; KATNB1; rCG_39150 rno-miR-125b 189 209 AGUGUUCAAUCCCAGAGUCCCU |:| | |||||||| CCGCCCCU--GCUUCUCAGGGC Katnb1; KATNB1; rCG_39150 rno-miR-138 206 219 CUAAGUGUUGUGGUCGA :||||:||||| ----GGCAACGCCAGCC Katnb1; KATNB1; rCG_39150 rno-miR-146 146 176 UUGGG--------UACCUUAAGUCAA-GAGU |||: :|||| |||||| ||| CACCUUCUCAGAUGUGGAC-UCAGUUCCUCU Katnb1; KATNB1; rCG_39150 rno-miR-151 65 93 GGAGUU-----C-CUCGGAGUCAGAUCA |||: | ||||||||| ||:| GCUCGUGGCCUGUGAGCCUCAGCCUGGC Katnb1; KATNB1; rCG_39150 rno-miR-15b 214 235 ACAUUUGGUA-CUACACGACGAU- |:|| || |||||||: ---CAGCCUUGGAGCUGCUGCUGU Katnb1; KATNB1; rCG_39150 rno-miR-16 210 232 -GCGGUUAUAAAUGCACGACGAU- |||||: | | ||||||: ACGCCAGCC--UUGGAGCUGCUGC Katnb1; KATNB1; rCG_39150 rno-miR-193 117 138 -GACC-CUGAAACAUCCGGUCAA |||| |:| || ||||| UCUGGAGGCAUGGUU-GCCAGC- Katnb1; KATNB1; rCG_39150 rno-miR-195 211 236 -CGGUU---AUAAAGAC-ACGACGAU ||||: |: ||| |||||: CGCCAGCCUUGGAGCUGCUGCUGUA- Katnb1; KATNB1; rCG_39150 rno-miR-200b 236 258 CAGUAGUAAUGGUCCGUC---AUAAU- ||||:||||||| ||||| -----AAUUAUCAGGCAGAUUUAUUAA Katnb1; KATNB1; rCG_39150 rno-miR-214 111 145 GACGGACAGACA--------------CGGACGACA ||| |||| |||||||| -GGCCAUUCUGGAGGCAUGGUUGCCAGCCUGCUGA Katnb1; KATNB1; rCG_39150 rno-miR-22 165 187 UGUCAAGAAGUUGACCGUC-GAA- |||||| || |||| ||| UCAGUUCCUCUCC--GCAGUCUUG Katnb1; KATNB1; rCG_39150 rno-miR-222 120 167 -CUCUG-------GGUCAU-CG------------GUCUACAUC GA |||:| |||| || |||||||:| || GGAGGCAUGGUUGCCAGCCUGCUGACCACCUUCUCAGAUGUGGACUC Katnb1; KATNB1; rCG_39150 rno-miR-24 68 90 GACAA-GGACGACUUGAC-UCGGU || |||| |||:| |||| -CGUGGCCUG-UGAGCCUCAGCCU Katnb1; KATNB1; rCG_39150 rno-miR-290 25 43 UUUUUCACGGGGGU-AUCAAACUC ||||:|| |:|||||: ------AGCCCUCACUGGUUUGGC Katnb1; KATNB1; rCG_39150 rno-miR-292-5p 21 43 GUUUUC-UCGGGGGU---CAAACUCA || |||||:|| |||||: ---CAGCAGCCCUCACUGGUUUGGC- Katnb1; KATNB1; rCG_39150 rno-miR-299 59 84 UACAUACA--C-CCUGCCAUUUGGU |||||| | || | ||:|:|| CUGUAUGCUCGUGGCCUGUGAGCCU Katnb1; KATNB1; rCG_39150 rno-miR-31 83 107 -GUCGAUACGGUCGU-AGAACGGA |||| ||| || ||||||| UCAGCCUGGCCUCCACUCUUGCCC Katnb1; KATNB1; rCG_39150 rno-miR-327 190 209 -UGGGAGUACGGGGAGUUCC- :||| | |||::||||:|| CGCCC-C-UGCUUCUCAGGGC Katnb1; KATNB1; rCG_39150 rno-miR-330 172 210 -AGAGACGUC---------CGGGACACGAAA-----CG- |||| |||| |||| ||||| || CUCUCCGCAGUCUUGUACCGCCCC-UGCUUCUCAGGGCA Katnb1; KATNB1; rCG_39150 rno-miR-337 203 229 UUUCCGUA---GUAUAU-CCUCGACUU |:|||| || ||||||| CAGGGCAACGCCAGCCUUGGAGCUGC- Katnb1; KATNB1; rCG_39150 rno-miR-343 1 19 AGACC-CGUGUGCCUCCCUCU || || ||:|| ||||| ---GGAGCUCAUGGUGGGAGC Katnb1; KATNB1; rCG_39150 rno-miR-346 220 252 -UCUC--CGUC--CGUG----AGUCCGUCUGU :||| || |:| |||||||||: UGGAGCUGCUGCUGUAAAUUAUCAGGCAGAUU Katnb1; KATNB1; rCG_39150 rno-miR-351 160 209 GUCC-GAGUU-----------UCC--------------CGAGGAGUCCCU || ||||: || |||:||||||| -UGGACUCAGUUCCUCUCCGCAGUCUUGUACCGCCCCUGCUUCUCAGGGC Katnb1; KATNB1; rCG_39150 rno-miR-376a 157 180 -GCACCUAA---AAGGAGAUGCUA :||||| ||||||| || AUGUGGACUCAGUUCCUCUCCGC- Katnb1; KATNB1; rCG_39150 rno-miR-424 201 235 AGGUUUUGU----------ACUUA-ACGACGAC- :||:::|| ||:| |||||||| CUCAGGGCAACGCCAGCCUUGGAGCUGCUGCUGU Katnb1; KATNB1; rCG_39150 rno-miR-485 119 144 -CUUAAGUAGUGCCGGUCGGA-GA- |:| ||| : |||||||| || UGGAGGCAUGGUUGCCAGCCUGCUG Katnb1; KATNB1; rCG_39150 rno-miR-497 211 235 AUGUUUGGUGUCAC-ACGACGAC- :| |:|| :| | |||||||| CGCCAGCCUUGGAGCUGCUGCUGU Katnb1; KATNB1; rCG_39150 rno-miR-503 178 201 -GUCAUGACAA---GGGCGACGAU |||| :||| ||| ||||| GCAGUCUUGUACCGCCC-CUGCUU Katnb1; KATNB1; rCG_39150 rno-miR-540 124 148 GGUCCUAGC---UGGA-GACUGGA || |:|:| :||| |||||| GCAUGGUUGCCAGCCUGCUGACCA Katnb1; KATNB1; rCG_39150 rno-miR-103 211 232 aguaUCGGGACAU-GUUACGACGA ||||:|| | | ||||||| cgccAGCCTTGGAGC--TGCTGCT Katnb1; KATNB1; rCG_39150 rno-miR-107 211 232 acuaUCGGGACAU-GUUACGACGA ||||:|| | | ||||||| cgccAGCCTTGGAGC--TGCTGCT Katnb1; KATNB1; rCG_39150 rno-miR-122a 26 53 uguuuGUGGU--AAC---AGUGUGAGGU |||:: ||| ||||||||:| gccctCACTGGTTTGGCCTCACACTCTA Katnb1; KATNB1; rCG_39150 rno-miR-125a 186 208 guguccaauuucccAGAGUCCCu |||||||| gtaccgcccctgctTCTCAGGGc Katnb1; KATNB1; rCG_39150 rno-miR-125b 187 208 aguguucaaucccAGAGUCCCu |||||||| taccgcccctgctTCTCAGGGc Katnb1; KATNB1; rCG_39150 rno-miR-138 199 218 cuaAGU---GUUGUGGUCGa ||| ||||:||||| ttcTCAGGGCAACGCCAGCc Katnb1; KATNB1; rCG_39150 rno-miR-146 150 175 uuGGG--UAC-CUUAAGUCAA-GAGu |:| ||| |:| |||||| ||| ttCTCAGATGTGGACTCAGTTCCTCt Katnb1; KATNB1; rCG_39150 rno-miR-151 73 92 GGAGUUCCUCGGAGUCAGAUCa ||| : ||||||||| ||:| CCT--GTGAGCCTCAGCCTGGc Katnb1; KATNB1; rCG_39150 rno-miR-15b 211 233 acauUUGGUACUAC-ACGACGAu |:|| ||: | ||||||| cgccAGCCTTGGAGCTGCTGCTg Katnb1; KATNB1; rCG_39150 rno-miR-16 211 233 GCGGUUAUAAAUGC-ACGACGAu |||||: || : | ||||||| CGCCAGCCTTGGAGCTGCTGCTg Katnb1; KATNB1; rCG_39150 rno-miR-193 118 138 GACC-CUGAAACAUCCGGUCaa |||| |:| | || ||||| CTGGAGGCATGGT-TGCCAGcc Katnb1; KATNB1; rCG_39150 rno-miR-195 212 233 CGGUUAUAAAGAC-ACGACGAu ||||: || | ||||||| GCCAGCCTTGGAGCTGCTGCTg Katnb1; KATNB1; rCG_39150 rno-miR-200b 233 256 CAGUAGUAAUGGUCCGUC---AUAAU || | ||||:||||||| ||||| GTAA--ATTATCAGGCAGATTTATTA Katnb1; KATNB1; rCG_39150 rno-miR-214 122 144 gaCGGACAGAC--ACGGACGACa || || :|| |||||||| agGCATGGTTGCCAGCCTGCTGa Katnb1; KATNB1; rCG_39150 rno-miR-222 141 164 cuCUGGGUCAUCGGUCUACAUCga |||| | :|||||||:| ctGACCACCTTCTCAGATGTGGac Katnb1; KATNB1; rCG_39150 rno-miR-24 63 83 gACAAGGAC--GACUUGACUCGGu || || || ||| |||||| aTGCTCGTGGCCTG---TGAGCCt Katnb1; KATNB1; rCG_39150 rno-miR-290 34 60 uuuuucaCGGGG-GU---AUCAAACuc |||:| || ||||||| tggtttgGCCTCACACTCTAGTTTGct Katnb1; KATNB1; rCG_39150 rno-miR-291-3p 1 23 CCGUGUGUUUCACCUUCGUGaaa || :| || :||||:||||| GGAGCTCATGGTGGGAGCACcag Katnb1; KATNB1; rCG_39150 rno-miR-292-5p 18 43 GUUUUC-UCGGGGGU---CAAACuca || || |||||:|| ||||| CACCAGCAGCCCTCACTGGTTTGgcc Katnb1; KATNB1; rCG_39150 rno-miR-31 84 106 GUCGAUACGGUCGU-AGAACGGa |||| ||| || ||||||| CAGCCTGGCCTCCACTCTTGCCc Katnb1; KATNB1; rCG_39150 rno-miR-327 188 207 UGG-GAGUACGGGGAGUUCC ||| | | |||::||||:|| ACCGCCCCTGCTTCTCAGGG Katnb1; KATNB1; rCG_39150 rno-miR-330 173 203 AGAGACGUC---------CGGGACACGAAacg |||| |||| |||| ||||| TCTCCGCAGTCTTGTACCGCCC-CTGCTTctc Katnb1; KATNB1; rCG_39150 rno-miR-337 203 229 uUUCCGUAGU-AU---AUCCUCGACuu |:|||| |: | | ||||||| cAGGGCAACGCCAGCCTTGGAGCTGct Katnb1; KATNB1; rCG_39150 rno-miR-346 221 251 uCUC--CGUC--CGU----GAGUCCGUCUgu ||| || | |:| ||||||||| gGAGCTGCTGCTGTAAATTATCAGGCAGAtt Katnb1; KATNB1; rCG_39150 rno-miR-351 179 208 GUCCGAGUUU--C----CCGAGGAGUCCCu ||| ||:: | | |||:||||||| CAGTCTTGTACCGCCCCTGCTTCTCAGGGc Katnb1; KATNB1; rCG_39150 rno-miR-376a 158 180 gCACCUAA---AAGGAGAUGCua ||||| | ||||||| || tGTGGACTCAGTTCCTCTCCGca Katnb1; KATNB1; rCG_39150 rno-miR-424 212 233 aGGUUUUGUACUUAACGACGAC |||: : ||: |||||||| gCCAGCCTTGGAGCTGCTGCTG Katnb1; KATNB1; rCG_39150 rno-miR-485 120 141 CUUAAGUAGUGCCGGUCGGAga |:| ||| :: |||||||| GGAGGCATGGTTGCCAGCCTgc Katnb1; KATNB1; rCG_39150 rno-miR-497 211 233 auGUUUGGUGUCAC-ACGACGAC | |:|| ::| | |||||||| cgCCAGCCTTGGAGCTGCTGCTG Katnb1; KATNB1; rCG_39150 rno-miR-503 179 200 GUCAUGACAAG--GGCGACGAu |||| :||| | || ||||| CAGTCTTGTACCGCCCCTGCTt Katnb1; KATNB1; rCG_39150 rno-miR-125a 201 208 -----------GUGUCCAAUUU---------CCCAGAGUCCCU |:||| | |||||||| CAGUUCCUCUCCGCAGUCUUGUACCGCCCCUGCUUCUCAGGGC Katnb1; KATNB1; rCG_39150 rno-miR-125b 201 208 AGUGUUCAAUCCC---------------------AGAGUCCCU |||||||| CAGUUCCUCUCCGCAGUCUUGUACCGCCCCUGCUUCUCAGGGC Katnb1; KATNB1; rCG_39150 rno-miR-15b 226 233 ACAU--------------------UUGGUACUAC-ACGACGAU |:|| || | |||||||: GCCCCUGCUUCUCAGGGCAACGCCAGCCUUGGAGCUGCUGCUGU Katnb1; KATNB1; rCG_39150 rno-miR-16 226 233 --------------------GCGGUUAUAAAUGC-ACGACGAU |||||: || | |||||||: GCCCCUGCUUCUCAGGGCAACGCCAGCCUUGGAGCUGCUGCUGU Katnb1; KATNB1; rCG_39150 rno-miR-195 226 233 ---------------------CGGUUAUAAAGAC-ACGACGAU ||||: || | |||||||: GCCCCUGCUUCUCAGGGCAACGCCAGCCUUGGAGCUGCUGCUGU Katnb1; KATNB1; rCG_39150 rno-miR-214 137 144 GA--------CGGACAGACA--------------CGGACGACA ||| |||| |||||||| UGCCCCGAUGGCCAUUCUGGAGGCAUGGUUGCCAGCCUGCUGA Katnb1; KATNB1; rCG_39150 rno-miR-31 99 106 --------------------GUCGAUACGGUCGU-AGAACGGA |||| ||| || ||||||| UGCUCGUGGCCUGUGAGCCUCAGCCUGGCCUCCACUCUUGCCC Katnb1; KATNB1; rCG_39150 rno-miR-351 201 208 -------------GUCCGAGUUUCC------CGAGGAGUCCCU ||| ||:: |||:||||||| CAGUUCCUCUCCGCAGUCUUGUACCGCCCCUGCUUCUCAGGGC Katnb1; KATNB1; rCG_39150 rno-miR-424 226 233 ---------AG-GUUUUGU----------ACUUA-ACGACGAC || ||:::|| ||:| |||||||| GCCCCUGCUUCUCAGGGCAACGCCAGCCUUGGAGCUGCUGCUGU Katnb1; KATNB1; rCG_39150 rno-miR-497 226 233 A--------------------UGUUUGGUGUCAC-ACGACGAC :| |:|| ::| | |||||||| GCCCCUGCUUCUCAGGGCAACGCCAGCCUUGGAGCUGCUGCUGU